View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15824_low_8 (Length: 275)
Name: NF15824_low_8
Description: NF15824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15824_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 861632 - 861902
Alignment:
| Q |
1 |
acaaaccatggtgacaacaatgagaacatccaaaacaaatgcccagacaaagaattcagcagaaatgtagataccaagggcaacacccatagcaatggag |
100 |
Q |
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| T |
861632 |
acaaaccatggtgacaacaatgagaacatccaaaacaaatgcccagacaaagaattcagcagaaatgtagataccaagggcaacacccatagcaatggag |
861731 |
T |
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| Q |
101 |
taaacagtccttagttcaacaatgtatttaatgggtatgattgatgtaatggatgctagagtcagcaatatagcaataataagcagccaagagggccagg |
200 |
Q |
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| T |
861732 |
taaacagtccttagttcaacaatgtatttaatgggtatgattgatgtaatggatgctagagtcagcaatatagcaataataagcagccaagagggccagg |
861831 |
T |
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| Q |
201 |
taggcttcccagctataaagccataaattgagatatcatcatcagaatgacgggcagttttgatgatgtcc |
271 |
Q |
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| T |
861832 |
taggcttcccagctataaagccataaattgagatatcatcatcagaatgacgggcagttttgatgatgtcc |
861902 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 1222909 - 1223179
Alignment:
| Q |
1 |
acaaaccatggtgacaacaatgagaacatccaaaacaaatgcccagacaaagaattcagcagaaatgtagataccaagggcaacacccatagcaatggag |
100 |
Q |
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| T |
1222909 |
acaaaccatggtgacaacaatgagaacatccaaaacaaatgcccagacaaagaattcagcagaaatgtagataccaagggcaacacccatagcaatggag |
1223008 |
T |
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| Q |
101 |
taaacagtccttagttcaacaatgtatttaatgggtatgattgatgtaatggatgctagagtcagcaatatagcaataataagcagccaagagggccagg |
200 |
Q |
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| T |
1223009 |
taaacagtccttagttcaacaatgtatttaatgggtatgattgatgtaatggatgctagagtcagcaatatagcaataataagcagccaagagggccagg |
1223108 |
T |
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| Q |
201 |
taggcttcccagctataaagccataaattgagatatcatcatcagaatgacgggcagttttgatgatgtcc |
271 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1223109 |
taggcttcccagctataaagccataaattgagatatcatcatcagaatgacgggcagttttgatgatgtcc |
1223179 |
T |
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