View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15825_low_27 (Length: 242)
Name: NF15825_low_27
Description: NF15825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15825_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 39032419 - 39032188
Alignment:
| Q |
1 |
cctatttaaatataatcacacagagcaaaacagtgtaataggaagatatataatgaaataagaactaattattccttcnnnnnnnnnnnnn--ctaatta |
98 |
Q |
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| T |
39032419 |
cctatttgaatataatcacacaaagcaaaacagtgtaataggaagatatataatgaaataagaactaattattccttcaaaaaaaaaaaaaaactaatta |
39032320 |
T |
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| Q |
99 |
tatattttagcttattttacacgnnnnnnntaactaggttagttttcttcgccaatagaacaatacttttct----agtgaaagagagcaagacttttta |
194 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| |
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| T |
39032319 |
tatattttagcttattttacacgaaaaaaataactaggttagttttcttcgcaaatagaacaatacttttctttttagtgaaagacagcaagacttttta |
39032220 |
T |
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| Q |
195 |
tgacggcaaagtgttcaatataaagtgaataa |
226 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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| T |
39032219 |
tgacggcaaagtgttcaatataaagtgaataa |
39032188 |
T |
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