View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15825_low_3 (Length: 567)

Name: NF15825_low_3
Description: NF15825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15825_low_3
NF15825_low_3
[»] chr1 (14 HSPs)
chr1 (18-554)||(51550618-51551154)
chr1 (329-485)||(12013886-12014042)
chr1 (369-533)||(22641426-22641590)
chr1 (369-554)||(18252521-18252708)
chr1 (369-554)||(27130939-27131126)
chr1 (358-503)||(27277140-27277285)
chr1 (369-554)||(18532043-18532230)
chr1 (359-554)||(16358564-16358761)
chr1 (435-496)||(31234511-31234572)
chr1 (369-554)||(27310106-27310293)
chr1 (421-485)||(12006145-12006209)
chr1 (404-488)||(23507426-23507510)
chr1 (435-503)||(36816216-36816284)
chr1 (230-275)||(12014436-12014481)
[»] chr5 (11 HSPs)
chr5 (369-490)||(17298496-17298617)
chr5 (369-485)||(17283056-17283172)
chr5 (369-471)||(17285364-17285466)
chr5 (359-503)||(19714078-19714224)
chr5 (369-533)||(19706769-19706935)
chr5 (402-490)||(28719350-28719438)
chr5 (400-483)||(17314579-17314662)
chr5 (461-503)||(39535695-39535737)
chr5 (461-554)||(24694987-24695080)
chr5 (461-554)||(24701751-24701844)
chr5 (399-503)||(18568080-18568184)
[»] chr2 (11 HSPs)
chr2 (368-554)||(22791387-22791575)
chr2 (369-554)||(21329777-21329964)
chr2 (400-496)||(18620325-18620421)
chr2 (435-503)||(22183069-22183137)
chr2 (435-523)||(36270719-36270807)
chr2 (438-505)||(18822640-18822707)
chr2 (436-490)||(6991708-6991762)
chr2 (369-522)||(36799518-36799665)
chr2 (229-275)||(36270173-36270220)
chr2 (438-483)||(12298362-12298407)
chr2 (219-267)||(18822080-18822128)
[»] scaffold0390 (2 HSPs)
scaffold0390 (369-554)||(6463-6650)
scaffold0390 (359-554)||(13479-13676)
[»] chr4 (18 HSPs)
chr4 (369-554)||(26964131-26964318)
chr4 (359-554)||(55613164-55613361)
chr4 (369-554)||(8858658-8858845)
chr4 (369-554)||(18262703-18262890)
chr4 (369-554)||(18269564-18269751)
chr4 (381-533)||(26970966-26971120)
chr4 (369-533)||(28392684-28392850)
chr4 (359-554)||(10620862-10621059)
chr4 (359-554)||(10627941-10628138)
chr4 (369-503)||(5707811-5707947)
chr4 (369-503)||(5714439-5714575)
chr4 (369-490)||(35224051-35224172)
chr4 (369-554)||(19926289-19926476)
chr4 (369-533)||(869088-869254)
chr4 (421-522)||(20311832-20311933)
chr4 (381-485)||(5667729-5667833)
chr4 (381-503)||(8845706-8845830)
chr4 (203-271)||(32646912-32646980)
[»] chr3 (21 HSPs)
chr3 (359-554)||(16482012-16482209)
chr3 (369-497)||(9504800-9504928)
chr3 (369-533)||(13517298-13517464)
chr3 (369-503)||(13211793-13211929)
chr3 (369-503)||(17780698-17780834)
chr3 (369-554)||(6110555-6110742)
chr3 (369-554)||(8490986-8491173)
chr3 (369-554)||(10572121-10572308)
chr3 (381-554)||(10578885-10579060)
chr3 (399-490)||(29925493-29925583)
chr3 (369-503)||(13249098-13249234)
chr3 (369-503)||(15600464-15600600)
chr3 (369-503)||(15607009-15607145)
chr3 (399-490)||(29974646-29974737)
chr3 (369-503)||(32056478-32056615)
chr3 (369-503)||(15357166-15357302)
chr3 (369-554)||(15341748-15341935)
chr3 (369-554)||(18520466-18520653)
chr3 (436-503)||(25800838-25800905)
chr3 (399-533)||(1647071-1647207)
chr3 (369-418)||(18523154-18523203)
[»] scaffold0234 (2 HSPs)
scaffold0234 (369-554)||(1850-2037)
scaffold0234 (369-554)||(10741-10928)
[»] chr8 (7 HSPs)
chr8 (399-554)||(14979012-14979167)
chr8 (359-503)||(15326679-15326825)
chr8 (359-503)||(15507048-15507194)
chr8 (369-554)||(6094614-6094801)
chr8 (369-554)||(21941156-21941343)
chr8 (369-533)||(28548538-28548704)
chr8 (384-554)||(22171992-22172164)
[»] chr7 (10 HSPs)
chr7 (369-554)||(29328275-29328462)
chr7 (369-533)||(15152934-15153100)
chr7 (369-554)||(11542509-11542696)
chr7 (359-484)||(12739017-12739144)
chr7 (369-554)||(11535591-11535778)
chr7 (381-497)||(12751329-12751447)
chr7 (399-463)||(2365441-2365505)
chr7 (369-503)||(18561489-18561625)
chr7 (461-503)||(24443134-24443176)
chr7 (435-503)||(13392707-13392775)
[»] chr6 (13 HSPs)
chr6 (369-554)||(17690969-17691156)
chr6 (381-554)||(27297132-27297307)
chr6 (369-554)||(27380781-27380968)
chr6 (369-554)||(27471164-27471351)
chr6 (369-554)||(29309381-29309568)
chr6 (369-554)||(29316340-29316527)
chr6 (329-503)||(13358855-13359029)
chr6 (369-503)||(11652214-11652350)
chr6 (369-503)||(17684049-17684185)
chr6 (369-554)||(25536720-25536907)
chr6 (369-503)||(16559052-16559188)
chr6 (447-503)||(21995446-21995504)
chr6 (435-490)||(28173111-28173166)
[»] scaffold0186 (1 HSPs)
scaffold0186 (369-503)||(25570-25706)
[»] scaffold0220 (1 HSPs)
scaffold0220 (369-532)||(18778-18943)
[»] scaffold0433 (1 HSPs)
scaffold0433 (369-554)||(7598-7785)
[»] scaffold0160 (1 HSPs)
scaffold0160 (331-496)||(24228-24393)
[»] scaffold0008 (1 HSPs)
scaffold0008 (359-503)||(229971-230117)


Alignment Details
Target: chr1 (Bit Score: 469; Significance: 0; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 18 - 554
Target Start/End: Complemental strand, 51551154 - 51550618
Alignment:
Q  18 aataaaatgctaaagtgagtgttcttgacaacaatattcgataataacagtatggatattcagcttaaaaggctcgtacaatacgttgtatagttgtaac 117  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||||||||    
T  51551154 aataaaatgctaaagtgagtgttcttgacaacagtattcgataataacagtatggatattcagcctgaaaggctcgtacgatacattgtatagttgtaac 51551055  T
Q  118 aatgtgcctcttaatgatcatcgtggtaagtgttggtgtaagccctaaatgccagtagttttatttaaatatgatacatgtgttgaatatttgtttatca 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  51551054 aatgtgcctcttaatgatcatcgtggtaagtgttggtgtaagccctaaatgccagtagttttatttaaatacgatacatgtgttgaatatttgtttatta 51550955  T
Q  218 ataaatcaagccatttctttattatgtttatgtgttaaaagaataaagtccctagaatcgcgacttcatcgggtactttgttgtcgtacagatgtcgtat 317  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||| |||| |||||||||    
T  51550954 ataaatcaagccatttctttactatgtttatgtgttaaaagaataaagtccctagaatagcaacttcattgggtactttgttgtcatacaaatgtcgtat 51550855  T
Q  318 gtaactcggtaactataaagtctgttaatggatattcgaaaaatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggag 417  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51550854 gtaacacggtaactataaagtctgttaatggatattcgacaaatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggag 51550755  T
Q  418 atctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatct 517  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51550754 atctgtcgaagggaccgatattgaactggacaagggtgacatactatgcattgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatct 51550655  T
Q  518 ttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    ||||||||||||| |||||||||||||||||||||||    
T  51550654 ttatcgcggaaagattctgccatatcacttgacattc 51550618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 329 - 485
Target Start/End: Complemental strand, 12014042 - 12013886
Alignment:
Q  329 actataaagtctgttaatggatattcgaaaaatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaag 428  Q
    |||||||| || ||| |||| |||| ||  ||||||||  |||||||| || | ||||||||||| | | |||||| |||||||  ||||  |||| |||    
T  12014042 actataaactcagttgatgggtatttgacgaatcatgttgagggacacaagtgtcctagatggaatttgcccctccgacataacaagagaaatgtctaag 12013943  T
Q  429 ggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagaca 485  Q
    || || ||||||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  12013942 ggcccaatattgaactggacaagggtggcatactatgcattgtgttcaatatagaca 12013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 369 - 533
Target Start/End: Complemental strand, 22641590 - 22641426
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgcct 468  Q
    ||||||| ||| ||||||||||||| |   |||||||||||||| ||||   |||| | ||| || ||||||| ||||||||||||||||| ||||||||    
T  22641590 agggacatgagtgacctagatggaattttcccctcctacataacaggagcaatgtctacgggcccaatattgatctggacaagggtgacatcctatgcct 22641491  T
Q  469 tgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    |||| |||||||||||| ||||  ||||| ||||| |  ||||||| | ||||| | ||||||||    
T  22641490 tgtgttcaatatagacatgagggaaaaagggtaattatacacaagaacattatcactgaaaggtt 22641426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 18252521 - 18252708
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  18252521 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 18252620  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  18252621 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 18252708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 27131126 - 27130939
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| |||||||||| || | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    |||||     
T  27131126 agggacatgagtgacctagatgtaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgt 27131027  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| || | ||||| |||||||||| || |||||||| ||||||||    
T  27131026 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgaacattatcacggaaaggttttgtcatatcacatgacattc 27130939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 358 - 503
Target Start/End: Complemental strand, 27277285 - 27277140
Alignment:
Q  358 aaatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgac 457  Q
    |||||||||  ||||||| ||| ||||||||||||| |   |||||||||||||| | |||  |||| | ||| || |||| |||||| |||||||||||    
T  27277285 aaatcatgttgagggacatgagtgacctagatggaattttcccctcctacataacagaagaaatgtctacgggcccaatatcgaactgaacaagggtgac 27277186  T
Q  458 atactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    || |||||||||||| |||||||| ||| ||||  ||||| |||||    
T  27277185 atgctatgccttgtgttcaatataaacatgagggaaaaagggtaat 27277140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 18532230 - 18532043
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  18532230 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 18532131  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| | |||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  18532130 cttgtgtttaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 18532043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 554
Target Start/End: Complemental strand, 16358761 - 16358564
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||||||||||||| |   ||||||||||||||  ||||  |||| | ||| || |||||||||| ||||||| |||||    
T  16358761 aatcatgttgagggacatgagtgacctagatggaattttcccctcctacataacaagagaaatgtctacgggcccaatattgaactagacaaggatgaca 16358662  T
Q  459 ta--ctatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
        |||||||||||| |||||||||| | |||| |||||| ||||| |  |||| |||| ||||| ||||||||||  | |||||||| ||| ||||    
T  16358661 cggtctatgccttgtgttcaatatagagatgagggcaaaagggtaattatacacatgatcattatcacggaaaggtttcgtcatatcacatgatattc 16358564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 435 - 496
Target Start/End: Complemental strand, 31234572 - 31234511
Alignment:
Q  435 atattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaa 496  Q
    ||||||||||||||||||||||||  |||||||||||| |||||||||||| |||| |||||    
T  31234572 atattgaactggacaagggtgacacgctatgccttgtgttcaatatagacatgagggcaaaa 31234511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 27310293 - 27310106
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| |||||||||| || |   |||||||||||||| |||||  |||| |  || || |||||||||| ||||||| |||||    ||||||    
T  27310293 agggacatgagtgacctagatgtaattttcccctcctacataacaggagaaatgtctacaggcccaatattgaactagacaaggatgacacggtctatgc 27310194  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| |  |||||||  | |||||||| ||||||||    
T  27310193 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacaaaaaggtttcgtcatatcacatgacattc 27310106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 485
Target Start/End: Complemental strand, 12006209 - 12006145
Alignment:
Q  421 tgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagaca 485  Q
    |||| ||||| || |||||||||||||||||||||| | ||||||| || || ||||||||||||    
T  12006209 tgtctaagggcccaatattgaactggacaagggtgaaacactatgcattttgttcaatatagaca 12006145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 23507426 - 23507510
Alignment:
Q  404 ctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacga 488  Q
    ||||||||| ||| |  |||| |||||||| ||||| |||| ||| |||||||||   ||||||||||| |||||||||||||||    
T  23507426 ctacataacaggataaatgtctaagggaccaatattaaactagaccagggtgacacggtatgccttgtgttcaatatagacacga 23507510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 503
Target Start/End: Complemental strand, 36816284 - 36816216
Alignment:
Q  435 atattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||||| ||||||| ||||||||  ||||||||||| ||||||||||||  ||| |||||| |||||    
T  36816284 atattgaattggacaatggtgacattatatgccttgtgttcaatatagacataagggcaaaagggtaat 36816216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 12014481 - 12014436
Alignment:
Q  230 atttctttattatgtttatgtgttaaaagaataaagtccctagaat 275  Q
    |||| |||||||||||||| |||||||| ||||||||| |||||||    
T  12014481 atttatttattatgtttatatgttaaaataataaagtcactagaat 12014436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 4e-24; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 369 - 490
Target Start/End: Complemental strand, 17298617 - 17298496
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgcct 468  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| | |||  | || |||||||  |||||||| |||||||||||||||||||||||||    
T  17298617 agggacatgagtgacctagatggaatttggccctcctacataacagaagaaatatctaagggacatatattgaattggacaagggtgacatactatgcct 17298518  T
Q  469 tgtgatcaatatagacacgagg 490  Q
    |||| |||||||||||| ||||    
T  17298517 tgtgttcaatatagacatgagg 17298496  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 369 - 485
Target Start/End: Complemental strand, 17283172 - 17283056
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgcct 468  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  | || |||||||  |||||||| ||||||||||||||||||||||| |    
T  17283172 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatatctaagggacaaatattgaattggacaagggtgacatactatgcat 17283073  T
Q  469 tgtgatcaatatagaca 485  Q
    |||| ||||||||||||    
T  17283072 tgtgttcaatatagaca 17283056  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 369 - 471
Target Start/End: Complemental strand, 17285466 - 17285364
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgcct 468  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  | || |||||||  |||||||| ||||||||||||||||||||||| |    
T  17285466 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatatctaagggacaaatattgaattggacaagggtgacatactatgcat 17285367  T
Q  469 tgt 471  Q
    |||    
T  17285366 tgt 17285364  T

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Target: chr5; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 503
Target Start/End: Complemental strand, 19714224 - 19714078
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||||||||||||||||| | | |||||||||||||| |||||  |||| | ||| || ||||||||||  |||||| |||||    
T  19714224 aatcatgttgagggacatgagcgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactatacaaggatgaca 19714125  T
Q  459 --tactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
        |||||||||||| | |||||||||| |||| |||||| |||||    
T  19714124 cggtctatgccttgtgtttaatatagacatgagggcaaaagggtaat 19714078  T

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Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 533
Target Start/End: Complemental strand, 19706935 - 19706769
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| |||||||||||||| || | | |||||||||||||| |||||  |||| | ||| || |||||||||| |||||||  ||||    |||||     
T  19706935 agggacatgagcgacctagatgaaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggacgacacggtctatgg 19706836  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||    
T  19706835 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtt 19706769  T

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Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 490
Target Start/End: Complemental strand, 28719438 - 28719350
Alignment:
Q  402 tcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgagg 490  Q
    |||||||||||  ||||  |||| | ||| || ||||| |||| |||||||||||| ||||||| |||||| |||||||||||| ||||    
T  28719438 tcctacataacaagagaaatgtcaacgggtccaatattaaactagacaagggtgacttactatgtcttgtgttcaatatagacatgagg 28719350  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 483
Target Start/End: Complemental strand, 17314662 - 17314579
Alignment:
Q  400 cctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatataga 483  Q
    |||||||||||||  ||||  | || |||||||  |||||||| |||| |||||||||||||||||  ||||| ||||||||||    
T  17314662 cctcctacataacatgagaaatatctaagggacaaatattgaattggaaaagggtgacatactatgtattgtgttcaatataga 17314579  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 503
Target Start/End: Original strand, 39535695 - 39535737
Alignment:
Q  461 ctatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    ||||||||||||||||||||| | ||||||||||||| |||||    
T  39535695 ctatgccttgtgatcaatataaatacgaggacaaaagagtaat 39535737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 554
Target Start/End: Complemental strand, 24695080 - 24694987
Alignment:
Q  461 ctatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||||||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  24695080 ctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 24694987  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 554
Target Start/End: Complemental strand, 24701844 - 24701751
Alignment:
Q  461 ctatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||||||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  24701844 ctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 24701751  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 503
Target Start/End: Complemental strand, 18568184 - 18568080
Alignment:
Q  399 ccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgccttgtgatcaatatagacacgaggacaaaa 496  Q
    |||||||||||||| |||||  |||| | |||  | |||||||||| | ||||| ||||||   |||||||||||  |||||||||||| ||||||||||    
T  18568184 ccctcctacataacaggagaaatgtctacgggcacaatattgaactaggcaaggatgacatggtctatgccttgt--tcaatatagacatgaggacaaaa 18568087  T
Q  497 gtgtaat 503  Q
    | |||||    
T  18568086 gggtaat 18568080  T

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Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 368 - 554
Target Start/End: Complemental strand, 22791575 - 22791387
Alignment:
Q  368 cagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatg 465  Q
    |||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | |||||| |||||||||| ||||||| |||||    |||||    
T  22791575 cagggacatgagtgacctagatggaatttgcccctcctacataacaggagaattgtctacgggaccaatattgaactagacaaggatgacacggtctatg 22791476  T
Q  466 ccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    ||||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  22791475 ccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcactgaaaggtttcgtcagatcacatgacattc 22791387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 21329964 - 21329777
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  21329964 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 21329865  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  21329864 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 21329777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 400 - 496
Target Start/End: Original strand, 18620325 - 18620421
Alignment:
Q  400 cctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaa 496  Q
    ||||||||||||| ||| |  |||| | ||| || ||||| ||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||    
T  18620325 cctcctacataacaggataaatgtctacgggcccaatattaaactgaacaagggtgacatgctatgccttgtgttcaatatagacatgaggacaaaa 18620421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 503
Target Start/End: Complemental strand, 22183137 - 22183069
Alignment:
Q  435 atattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||||| ||||||||||||||||  ||||||||||| |||||||| ||| ||||||||||| |||||    
T  22183137 atattgaattggacaagggtgacatgttatgccttgtgttcaatatatacatgaggacaaaagggtaat 22183069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 523
Target Start/End: Original strand, 36270719 - 36270807
Alignment:
Q  435 atattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcg 523  Q
    ||||||||||||| |||| ||| ||||||||||||||| |||||||||||| ||||  ||||| ||||  |  ||||||||||||||||    
T  36270719 atattgaactggataaggatgatatactatgccttgtgttcaatatagacatgagggaaaaagggtaactatacacaagatctttatcg 36270807  T

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Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 18822640 - 18822707
Alignment:
Q  438 ttgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaataa 505  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||| |||| | |||| |||||||    
T  18822640 ttgaactggacaagggtgacatattatgtcttgtgttcaatatagacatgaggtcgaaagggtaataa 18822707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 436 - 490
Target Start/End: Complemental strand, 6991762 - 6991708
Alignment:
Q  436 tattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgagg 490  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||| ||||    
T  6991762 tattgaactggacaagggtgacacactatgtcttgtgttcaatatagacatgagg 6991708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 522
Target Start/End: Complemental strand, 36799665 - 36799518
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgcct 468  Q
    ||||||| ||| ||||||||||||| | || ||||||| ||||| | |||  |||| ||||| || |||||||||| || |||||||||||| || ||||    
T  36799665 agggacatgagtgacctagatggaatttgtacctcctaaataacagaagaaatgtctaagggtccaatattgaacttgaaaagggtgacatattaggcct 36799566  T
Q  469 tgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatc 522  Q
    |      | |||||| | |||| ||||||  |||||| ||||||||||||||||    
T  36799565 t------attatagatatgagggcaaaaggataataatgcacaagatctttatc 36799518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 36270173 - 36270220
Alignment:
Q  229 catttctttattatgtttatg-tgttaaaagaataaagtccctagaat 275  Q
    ||||||||||||||||||||| | |||||| |||||||||||||||||    
T  36270173 catttctttattatgtttatgattttaaaataataaagtccctagaat 36270220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 483
Target Start/End: Original strand, 12298362 - 12298407
Alignment:
Q  438 ttgaactggacaagggtgacatactatgccttgtgatcaatataga 483  Q
    |||||||||||||||||||||   ||||||||||| ||||||||||    
T  12298362 ttgaactggacaagggtgacacgttatgccttgtgttcaatataga 12298407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 18822080 - 18822128
Alignment:
Q  219 taaatcaagccatttctttattatgtttatgtgttaaaagaataaagtc 267  Q
    ||||| ||| ||||| |||||||||||||| |||||||| |||||||||    
T  18822080 taaataaaggcatttttttattatgtttatatgttaaaataataaagtc 18822128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 6650 - 6463
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | |||||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  6650 agggacatgagtgacctagatggaatttgtccctcctacataacaggagaaatgtctatgggcccaatattgaactagacaaggatgacacggtctatgc 6551  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  6550 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 6463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 554
Target Start/End: Complemental strand, 13676 - 13479
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||||||||||||| | |||||||||||||||| |||||  |||| | ||| || |||||||||  ||||||| |||||    
T  13676 aatcatgttgagggacatgagtgacctagatggaatttgtccctcctacataacaggagaaatgtctacgggcccaatattgaacaagacaaggatgaca 13577  T
Q  459 --tactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
        |||||||||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  13576 cggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 13479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 4e-21; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 26964131 - 26964318
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| ||||| |  ||||||    
T  26964131 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgc 26964230  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  26964231 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 26964318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 554
Target Start/End: Original strand, 55613164 - 55613361
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    
T  55613164 aatcatgttgagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 55613263  T
Q  459 --tactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
        |||||||||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  55613264 cggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 55613361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 8858658 - 8858845
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  8858658 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 8858757  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  8858758 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 8858845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 18262703 - 18262890
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  18262703 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 18262802  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  18262803 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 18262890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 18269564 - 18269751
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  18269564 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 18269663  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  18269664 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacctgacattc 18269751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 533
Target Start/End: Original strand, 26970966 - 26971120
Alignment:
Q  381 gacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgccttgtgatcaat 478  Q
    ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| ||||| |  |||||||||||| |||||    
T  26970966 gacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaat 26971065  T
Q  479 atagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    ||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||    
T  26971066 atagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtt 26971120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 369 - 533
Target Start/End: Complemental strand, 28392850 - 28392684
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  28392850 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 28392751  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||    
T  28392750 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtt 28392684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 554
Target Start/End: Complemental strand, 10621059 - 10620862
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    
T  10621059 aatcatgttgagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 10620960  T
Q  459 --tactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
        ||||||||| || |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  10620959 cggtctatgccttatgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 10620862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 554
Target Start/End: Complemental strand, 10628138 - 10627941
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    
T  10628138 aatcatgttaagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 10628039  T
Q  459 --tactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
        ||||||||| || |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  10628038 cggtctatgccttatgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 10627941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 503
Target Start/End: Original strand, 5707811 - 5707947
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  5707811 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 5707910  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||| |||||| |||||    
T  5707911 cttgtgttcaatatagacatgagggcaaaagggtaat 5707947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 503
Target Start/End: Original strand, 5714439 - 5714575
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  5714439 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 5714538  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||| |||||| |||||    
T  5714539 cttgtgttcaatatagacatgagggcaaaagggtaat 5714575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 490
Target Start/End: Original strand, 35224051 - 35224172
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgcct 468  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||  |||||  |||| | ||| || |||||||||| ||||||||||||||||||||| |    
T  35224051 agggacatgagtgacctagatggaatttgcccctcctacataataggagaaatgtctacgggcccaatattgaactagacaagggtgacatactatgcat 35224150  T
Q  469 tgtgatcaatatagacacgagg 490  Q
     ||| |||||||| ||| ||||    
T  35224151 cgtgttcaatataaacatgagg 35224172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 19926476 - 19926289
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  | || | ||| || |||||||||| ||||||| |||||    ||||||    
T  19926476 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatatctacgggcccaatattgaactagacaaggatgacacggtctatgc 19926377  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  19926376 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 19926289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 369 - 533
Target Start/End: Original strand, 869088 - 869254
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | |  ||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  869088 agggacatgagtgacctagatggaatttgctcctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 869187  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||    
T  869188 cttgtgttcaatatagacatgagggcaaaagagtaattatacacatgatcattatcacagaaaggtt 869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 522
Target Start/End: Original strand, 20311832 - 20311933
Alignment:
Q  421 tgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatcttta 520  Q
    |||| ||||| || |||||| | |||||||||||| ||||||||||||| || |||||||||||| |||  |||||| ||||||| |||||| || ||||    
T  20311832 tgtctaagggcccaatattgtaatggacaagggtgtcatactatgccttatgttcaatatagacatgagagcaaaagggtaataatgcacaatatattta 20311931  T
Q  521 tc 522  Q
    ||    
T  20311932 tc 20311933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 5667833 - 5667729
Alignment:
Q  381 gacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatat 480  Q
    ||||||||||||| | | |||||||||||||| |||||  | || | ||| || |||||||||| || |||||||||||  ||||||||||| |||||||    
T  5667833 gacctagatggaatttgcccctcctacataacaggagaaatttctacgggcccaatattgaacttgagaagggtgacatgttatgccttgtgttcaatat 5667734  T
Q  481 agaca 485  Q
    |||||    
T  5667733 agaca 5667729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 503
Target Start/End: Original strand, 8845706 - 8845830
Alignment:
Q  381 gacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgccttgtgatcaat 478  Q
    ||||||||||||| | | | |||||||||||| |||||  |||| | | | || |||||||||| ||||||| ||||| |  |||||||||||| |||||    
T  8845706 gacctagatggaatttgcctctcctacataacaggagaaatgtctacgtgcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaat 8845805  T
Q  479 atagacacgaggacaaaagtgtaat 503  Q
    ||||||| |||| |||||| |||||    
T  8845806 atagacatgagggcaaaagggtaat 8845830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 32646980 - 32646912
Alignment:
Q  203 aatatttgtttatcaataaatcaagccatttctttattatgtttatgtgttaaaagaataaagtcccta 271  Q
    ||||||| ||||| |||| || ||| |||||||||||||| ||| |||||||||| |||||| ||||||    
T  32646980 aatatttatttattaatacattaaggcatttctttattatatttttgtgttaaaataataaattcccta 32646912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 6e-20; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 554
Target Start/End: Complemental strand, 16482209 - 16482012
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    
T  16482209 aatcatgttgagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 16482110  T
Q  459 --tactatgccttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
        |||||||||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  16482109 cggtctatgccttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 16482012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 497
Target Start/End: Original strand, 9504800 - 9504928
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgcct 468  Q
    |||||||| || ||||||||||||| |   ||||||||||||| ||||||| |||| ||| | || ||||||||| |||||||||||||||| ||||| |    
T  9504800 agggacacaagtgacctagatggaattttcccctcctacataatgggagatatgtctaagcgcccaatattgaaccggacaagggtgacatattatgcat 9504899  T
Q  469 tgtgatcaatatagacacgaggacaaaag 497  Q
    |||| || ||||| ||| |||| ||||||    
T  9504900 tgtgttctatatatacatgagggcaaaag 9504928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 369 - 533
Target Start/End: Original strand, 13517298 - 13517464
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  13517298 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 13517397  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||    
T  13517398 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtt 13517464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 503
Target Start/End: Original strand, 13211793 - 13211929
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  13211793 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 13211892  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||| |||||| |||||    
T  13211893 cttgtgttcaatatagacatgagggcaaaagggtaat 13211929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 17780834 - 17780698
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| ||||||||||||| | | | |||||||||||| |||||  |||| | ||| || |||||||||| ||||||| ||||| |  ||||||    
T  17780834 agggacatgagtgacctagatggaatttgcctctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgc 17780735  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||| |||||| |||||    
T  17780734 cttgtgttcaatatagacatgagggcaaaagggtaat 17780698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 6110555 - 6110742
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| |  ||||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  6110555 agggacatgagtgacctagatggaatttttccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 6110654  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| | || |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  6110655 cttgtgttcaatatagacatgggggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 6110742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 8490986 - 8491173
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  8490986 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 8491085  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| ||||||  |||| |  |||| |||| ||||| | ||||||||  | ||||| || ||||||||    
T  8491086 cttgtgttcaatatagacatgagggcaaaaggataattatacacatgatcattatcacagaaaggtttcgtcatattacatgacattc 8491173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 10572308 - 10572121
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| ||||||||||||| | |  ||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  10572308 agggacatgagtgacctagatggaatttgctcctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 10572209  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  10572208 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 10572121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 381 - 554
Target Start/End: Complemental strand, 10579060 - 10578885
Alignment:
Q  381 gacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgccttgtgatcaat 478  Q
    ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    |||||||||||| |||||    
T  10579060 gacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaat 10578961  T
Q  479 atagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    ||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  10578960 atagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 10578885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 399 - 490
Target Start/End: Original strand, 29925493 - 29925583
Alignment:
Q  399 ccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgagg 490  Q
    ||||||||||||||||||||  |||| ||||  || |||||||||| |||||||||||||| ||||| |||||| |||||||||||| ||||    
T  29925493 ccctcctacataacgggagaaatgtctaaggc-ccaatattgaactagacaagggtgacatgctatgtcttgtgttcaatatagacatgagg 29925583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 503
Target Start/End: Original strand, 13249098 - 13249234
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  13249098 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 13249197  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| ||||  ||||| |||||    
T  13249198 cttgtgttcaatatagacatgagggaaaaagggtaat 13249234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 15600600 - 15600464
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  15600600 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 15600501  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    ||| || |||||||||||| |||| |||||| |||||    
T  15600500 cttatgttcaatatagacatgagggcaaaagggtaat 15600464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 15607145 - 15607009
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  15607145 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 15607046  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    ||| || |||||||||||| |||| |||||| |||||    
T  15607045 cttatgttcaatatagacatgagggcaaaagggtaat 15607009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 399 - 490
Target Start/End: Original strand, 29974646 - 29974737
Alignment:
Q  399 ccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgagg 490  Q
    |||||||||||||| |||||  |||| |  || || |||||||||| |||||||||||||| ||||| |||||| |||||||||||| ||||    
T  29974646 ccctcctacataacaggagaaatgtctacaggcccaatattgaactagacaagggtgacatgctatgtcttgtgttcaatatagacatgagg 29974737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 32056615 - 32056478
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  32056615 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 32056516  T
Q  467 cttgtgatcaat-atagacacgaggacaaaagtgtaat 503  Q
    |||||| ||||| ||||||| |||| |||||| |||||    
T  32056515 cttgtgttcaataatagacatgagggcaaaagagtaat 32056478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 15357302 - 15357166
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| |   |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||     |||||    
T  15357302 agggacatgagtgacctagatggaatttacccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtttatgc 15357203  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||| |||||| |||||    
T  15357202 cttgtgttcaatatagacatgagggcaaaagggtaat 15357166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 15341935 - 15341748
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| ||||||||||||| |   || ||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  15341935 agggacatgagtgacctagatggaatttacccttcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 15341836  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| ||||  ||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  15341835 cttgtgttcaatatagacatgagggaaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 15341748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 18520466 - 18520653
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| || |||||||||| | | |||||||||||||| |||||  |||| | ||| || ||||||||||  |||||| |||||    ||||||    
T  18520466 agggacatgagtgagctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactacacaaggatgacacggtctatgc 18520565  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| | |||||||||| |||| ||||||  |||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  18520566 cttgtgtttaatatagacatgagggcaaaaggataattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 18520653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 436 - 503
Target Start/End: Original strand, 25800838 - 25800905
Alignment:
Q  436 tattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    ||||||| ||||||||| |||||||||||| |||||| | |||||| ||| ||||| ||||| |||||    
T  25800838 tattgaattggacaaggatgacatactatgtcttgtgtttaatataaacatgaggataaaagggtaat 25800905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 533
Target Start/End: Complemental strand, 1647207 - 1647071
Alignment:
Q  399 ccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgccttgtgatcaatatagacacgaggacaaaa 496  Q
    |||||||||||||| || ||  |||| | ||| || || ||||||| ||||||| |||||    |||||||||||| |||||||||||| |||| |||||    
T  1647207 ccctcctacataacaggtgaaatgtctacgggcccaattttgaactagacaaggatgacacggtctatgccttgtgttcaatatagacatgagggcaaaa 1647108  T
Q  497 gtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    | ||||| |  |||| |||| ||||| | ||||||||    
T  1647107 gagtaattatacacatgatcattatcacagaaaggtt 1647071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 369 - 418
Target Start/End: Original strand, 18523154 - 18523203
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggaga 418  Q
    ||||||| ||| ||||||||||||| | |||||||||||||||| |||||    
T  18523154 agggacatgagtgacctagatggaatttgtccctcctacataacaggaga 18523203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 2037 - 1850
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  2037 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 1938  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  1937 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 1850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 10928 - 10741
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  10928 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 10829  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  10828 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 14979167 - 14979012
Alignment:
Q  399 ccctcctacataacgggagatctgtcgaaggg-accgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaag 497  Q
    |||||| ||||||| |||||  | || ||||| ||| |||||||||||||||||||||||||||||||| ||||| || || |||||| |||||||||||    
T  14979167 ccctccaacataacaggagaaatctctaagggtaccaatattgaactggacaagggtgacatactatgcattgtgttctatgtagacatgaggacaaaag 14979068  T
Q  498 tgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
     ||||| |   |||| ||| ||||| |  ||||||| || |||||||||||||||||    
T  14979067 agtaattatatacaatatcgttatcacaaaaaggtt-tgtcatatcacttgacattc 14979012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 503
Target Start/End: Original strand, 15326679 - 15326825
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtg--a 456  Q
    ||||||||  ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| ||  |    
T  15326679 aatcatgttgagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatggca 15326778  T
Q  457 catactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |   |||||||||||| |||||||||||| |||| |||||| |||||    
T  15326779 cggtctatgccttgtgttcaatatagacatgagggcaaaagggtaat 15326825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 503
Target Start/End: Original strand, 15507048 - 15507194
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtg--a 456  Q
    ||||||||  ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| ||  |    
T  15507048 aatcatgttgagggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatggca 15507147  T
Q  457 catactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |   |||||||||||| |||||||||||| |||| |||||| |||||    
T  15507148 cggtctatgccttgtgttcaatatagacatgagggcaaaagggtaat 15507194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 6094614 - 6094801
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| |||| |||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  6094614 agggacatgagtgaccaagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 6094713  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||  ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  6094714 cttgtgttcaatatagacatgagggcaaaaaggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 6094801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 21941156 - 21941343
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| ||||||||||||| |   ||||||||||||||  ||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  21941156 agggacatgagtgacctagatggaattttcccctcctacataacatgagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 21941255  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  21941256 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgacagatcacatgacattc 21941343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 533
Target Start/End: Original strand, 28548538 - 28548704
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| | ||||||||||| | | ||||||||||||||  ||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  28548538 agggacatgagtggcctagatggaatttgcccctcctacataacatgagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 28548637  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| || | ||||| ||||||||||    
T  28548638 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgaacattatcacggaaaggtt 28548704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 554
Target Start/End: Original strand, 22171992 - 22172164
Alignment:
Q  384 ctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgccttgtgatcaatata 481  Q
    |||||||||| | | |||||||||||||| |||||  |||| |  || || |||||||||| ||||||| |||||    |||||||||||| ||||||||    
T  22171992 ctagatggaatttgcccctcctacataacaggagaaatgtctacaggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaatata 22172091  T
Q  482 gacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||| |||| |||||| ||||| |  |||| |||| ||||| | |||||||| || || ||||  ||||||||    
T  22172092 gacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggttttgtcagatcatatgacattc 22172164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 9e-19; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 29328275 - 29328462
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  29328275 agggacatgagtgacctagatggaacttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 29328374  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  29328375 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 29328462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 369 - 533
Target Start/End: Original strand, 15152934 - 15153100
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  15152934 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 15153033  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggtt 533  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||    
T  15153034 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtt 15153100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 11542696 - 11542509
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  11542696 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaacttgacaaggatgacacggtctatgc 11542597  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| ||||||  |||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  11542596 cttgtgttcaatatagacatgagggcaaaaggataattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 11542509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 484
Target Start/End: Original strand, 12739017 - 12739144
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | |||||| |||||||||| ||||||| |||||    
T  12739017 aatcatgttgagggacatgagtgacctagatggaatttggccctcctacataacaggagaaatgtctacgggaccaatattgaactagacaaggatgaca 12739116  T
Q  459 --tactatgccttgtgatcaatatagac 484  Q
        |||||||||||| |||||||||||    
T  12739117 cggtctatgccttgtgttcaatatagac 12739144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 11535778 - 11535591
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| |   |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  11535778 agggacatgagtgacctagatggaattttcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 11535679  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||  |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  11535678 cttgtattcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 11535591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 381 - 497
Target Start/End: Original strand, 12751329 - 12751447
Alignment:
Q  381 gacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgccttgtgatcaat 478  Q
    ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    |||||||||||| |||||    
T  12751329 gacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgccttgtgttcaat 12751428  T
Q  479 atagacacgaggacaaaag 497  Q
    ||||||| |||| ||||||    
T  12751429 atagacatgagggcaaaag 12751447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 2365441 - 2365505
Alignment:
Q  399 ccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacatacta 463  Q
    ||||||||||||||  ||||| |||| ||||| || |||||||| ||||||||||||||||||||    
T  2365441 ccctcctacataacaagagatatgtctaagggcccaatattgaaatggacaagggtgacatacta 2365505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 369 - 503
Target Start/End: Original strand, 18561489 - 18561625
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| |||||||| |||| | | |||||||||||||| | |||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  18561489 agggacatgagtgacctagagggaatttgcccctcctacataacagaagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 18561588  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| ||||||||||||  ||| |||||| |||||    
T  18561589 cttgtgttcaatatagacataagggcaaaagggtaat 18561625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 503
Target Start/End: Complemental strand, 24443176 - 24443134
Alignment:
Q  461 ctatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    ||||||||||||||||||||||| |||| |||||||| |||||    
T  24443176 ctatgccttgtgatcaatatagatacgaagacaaaagagtaat 24443134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 435 - 503
Target Start/End: Original strand, 13392707 - 13392775
Alignment:
Q  435 atattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||||||| ||||||||||||||  |||| | |||| |||||||||||| |||| | |||| |||||    
T  13392707 atattgaactagacaagggtgacatgttatgtcctgtgttcaatatagacatgagggcgaaagggtaat 13392775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 9e-19; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 17691156 - 17690969
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  17691156 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 17691057  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  17691056 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 17690969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 381 - 554
Target Start/End: Original strand, 27297132 - 27297307
Alignment:
Q  381 gacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgccttgtgatcaat 478  Q
    ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| ||||| |  |||||||||||| |||||    
T  27297132 gacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacagtctatgccttgtgttcaat 27297231  T
Q  479 atagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    ||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  27297232 atagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 27297307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 27380968 - 27380781
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  27380968 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 27380869  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  27380868 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 27380781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 27471351 - 27471164
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  27471351 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 27471252  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  27471251 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 27471164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 29309381 - 29309568
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  29309381 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 29309480  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  29309481 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 29309568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 29316340 - 29316527
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  29316340 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 29316439  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  29316440 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 29316527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 503
Target Start/End: Complemental strand, 13359029 - 13358855
Alignment:
Q  329 actataaagtctgttaatggatattcgaaaaatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaag 428  Q
    ||||||||||| ||| ||||| |||| |  |||||||   ||||||| ||| |||||| |||||| | |||||||||||||||| | |||   ||| |||    
T  13359029 actataaagtcggttgatggacattcaacgaatcatggtgagggacatgagtgacctatatggaatttgtccctcctacataacagtagaatcgtctaag 13358930  T
Q  429 ggaccgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    || || |||||||| |  ||||||||| |||||||||  ||||| |||||||||||| || |||||||| |||||    
T  13358929 ggtccaatattgaattcaacaagggtggcatactatgtgttgtgttcaatatagacatgaagacaaaagagtaat 13358855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 503
Target Start/End: Original strand, 11652214 - 11652350
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  11652214 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgacacggtctatgc 11652313  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||  |||||| |||||    
T  11652314 cttgtgttcaatatagacatgagagcaaaagggtaat 11652350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 17684185 - 17684049
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    ||||||    
T  17684185 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctatgggcccaatattgaactagacaaggatgacacggtctatgc 17684086  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| ||||||||||||  ||| |||||| |||||    
T  17684085 cttgtgttcaatatagacataagggcaaaagggtaat 17684049  T

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Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 554
Target Start/End: Complemental strand, 25536907 - 25536720
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | | | || |||||||||| ||||||| |||||    ||||||    
T  25536907 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgtgcccaatattgaactagacaaggatgacacggtctatgc 25536808  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| |||||||||||| |||| |||||   |||| |  |||| |||| ||||| | ||||||||  | |||||||| ||||||||    
T  25536807 cttgtgttcaatatagacatgagggcaaaaagataattatacacatgatcattatcacagaaaggtttcgtcatatcacatgacattc 25536720  T

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Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 16559188 - 16559052
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacata--ctatgc 466  Q
    ||||||| ||| ||||| ||||||| | | |||||||| ||||| |||||  |||| | ||| || ||||||||||  |||||| ||||| |  ||||||    
T  16559188 agggacatgagtgacctggatggaatttgcccctcctaaataacaggagaaatgtctacgggcccaatattgaactaaacaaggatgacacagtctatgc 16559089  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||| |||||| |||||    
T  16559088 cttgtgttcaatatagacatgagggcaaaagggtaat 16559052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 447 - 503
Target Start/End: Original strand, 21995446 - 21995504
Alignment:
Q  447 acaagggtgacata--ctatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||||||||| |  ||||||||||||||||||||||| | ||||||||||| |||||    
T  21995446 acaagggtgacaaaatctatgccttgtgatcaatatagatatgaggacaaaagagtaat 21995504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 490
Target Start/End: Original strand, 28173111 - 28173166
Alignment:
Q  435 atattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgagg 490  Q
    |||||||||||||||||||| |||||| |||| ||||  |||||||||||| ||||    
T  28173111 atattgaactggacaagggttacataccatgctttgtattcaatatagacatgagg 28173166  T

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Target: scaffold0186 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 369 - 503
Target Start/End: Complemental strand, 25706 - 25570
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgacat--actatgc 466  Q
    ||||||| ||| ||||||||||||| | | ||||||||| |||| |||||  |||| | ||| || |||||||||| ||||||| ||||||   ||||||    
T  25706 agggacatgagtgacctagatggaattcgcccctcctacgtaacaggagaaatgtctacgggcccaatattgaactagacaaggatgacatggtctatgc 25607  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |||||| |||||||||||| |||| |||||| |||||    
T  25606 cttgtgttcaatatagacatgagggcaaaagggtaat 25570  T

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Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 369 - 532
Target Start/End: Original strand, 18778 - 18943
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||  ||||||| |||||    ||||||    
T  18778 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacgggcccaatattgaacgagacaaggatgacacggtctatgc 18877  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggt 532  Q
    |||||| |||||||||||| |||| |||||| ||||| |  |||| |||| ||||| | |||||||    
T  18878 cttgtgttcaatatagacatgagggcaaaagggtaattatacacatgatcattatcacagaaaggt 18943  T

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Target: scaffold0433 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 554
Target Start/End: Original strand, 7598 - 7785
Alignment:
Q  369 agggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca--tactatgc 466  Q
    ||||||| ||| ||||||||||||| | | |||||||||||||| |||||  |||| |  || || |||||||||| ||||||| |||||    ||||||    
T  7598 agggacatgagtgacctagatggaatttgcccctcctacataacaggagaaatgtctacaggcccaatattgaactagacaaggatgacacggtctatgc 7697  T
Q  467 cttgtgatcaatatagacacgaggacaaaagtgtaataaggcacaagatctttatcgcggaaaggttctgccatatcacttgacattc 554  Q
    |||||| ||||||||| || |||| |||||| ||||| |  |||| |||| ||||| | ||||||||  | || ||||| ||||||||    
T  7698 cttgtgttcaatataggcatgagggcaaaagggtaattatacacatgatcattatcacagaaaggtttcgtcagatcacatgacattc 7785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 496
Target Start/End: Original strand, 24228 - 24393
Alignment:
Q  331 tataaagtctgttaatggatattcgaaaaatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaaggg 430  Q
    ||||||||| ||| ||||||| |||  |||||||||  ||||||| |||    |||||||||| | | |||||| |||||||  ||||  |||| ||||     
T  24228 tataaagtcggttgatggatactcgtcaaatcatgttgagggacatgagtattctagatggaatttgcccctccaacataacaagagaaatgtctaagga 24327  T
Q  431 accgatattgaactggacaagggtgacatactatgccttgtgatcaatatagacacgaggacaaaa 496  Q
     || ||||| ||||||||||| ||||||||||||| |||||| |||||| | ||| |||| |||||    
T  24328 tccaatattaaactggacaagagtgacatactatgtcttgtgttcaatacaaacatgagggcaaaa 24393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 503
Target Start/End: Complemental strand, 230117 - 229971
Alignment:
Q  359 aatcatgtccagggacacgagcgacctagatggaagtggtccctcctacataacgggagatctgtcgaagggaccgatattgaactggacaagggtgaca 458  Q
    ||||||||  ||||||| ||| ||  ||||||||| | | |||||||||||||| |||||  |||| | ||| || |||||||||| ||||||| |||||    
T  230117 aatcatgttgagggacatgagtgatttagatggaattcgcccctcctacataacaggagaaatgtctacgggcccaatattgaactagacaaggatgaca 230018  T
Q  459 t--actatgccttgtgatcaatatagacacgaggacaaaagtgtaat 503  Q
    |    |||| |||||| ||||||||||||  ||| |||||| |||||    
T  230017 tggtttatgtcttgtgttcaatatagacataagggcaaaagggtaat 229971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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