View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15825_low_9 (Length: 397)
Name: NF15825_low_9
Description: NF15825
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15825_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 1 - 381
Target Start/End: Complemental strand, 32619552 - 32619172
Alignment:
| Q |
1 |
aggaccttgataggatgcaaaagctctcttcaacattcaacattgctagctagattctctagttaagctgaaaagaatttgttgtgtaagtctagacatt |
100 |
Q |
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| T |
32619552 |
aggaccttgataggatgcaaaagctctcttcaacattcaacattgctagctagattctctagttaagctgaaaagaatttgttgtgtaagtctagacatt |
32619453 |
T |
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| Q |
101 |
tagttaaaacttctagaatagaatttatatgaaacaaatattttgaaaggtgcgtggaaattggtaagacatcataatatgaatggaataaccttaaact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
32619452 |
tagttaaaacttctagaatagaatttatatgaaacaaatattttgaaaggtgcgtggaaactggtaagacatcataatatgaatggaataaccttaaact |
32619353 |
T |
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| Q |
201 |
tcgcaactaacatgcatgtctgtcattgtgactaaatcttctagaattagcaaaaaatgtctgaatgaatgaattaacataacatctatgttatgacttg |
300 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32619352 |
tcgtaactaacatgcatgtctgtcattgtgactaaatcttctagaattagcaaaaaatgtctgaatgaatgaattaacataacatctatgttatgacttg |
32619253 |
T |
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| Q |
301 |
gtcattgatgtcgtggaagcctcactgtcttcaaaacaaatgacactattttcagaattgcattctcttcttataacttgt |
381 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32619252 |
gtcattgatgtcgtggaagcctcactgtcttcaaaacaaatgacactattttcagaattgcattctcttcttataacttgt |
32619172 |
T |
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