View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15826_low_4 (Length: 276)

Name: NF15826_low_4
Description: NF15826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15826_low_4
NF15826_low_4
[»] chr4 (8 HSPs)
chr4 (20-268)||(15349253-15349501)
chr4 (20-268)||(14687181-14687435)
chr4 (20-264)||(42711184-42711434)
chr4 (21-157)||(11498023-11498159)
chr4 (21-157)||(45240267-45240404)
chr4 (21-144)||(18290701-18290824)
chr4 (21-158)||(10629417-10629551)
chr4 (38-147)||(11918125-11918233)
[»] chr7 (13 HSPs)
chr7 (20-268)||(540168-540416)
chr7 (20-268)||(16327176-16327430)
chr7 (20-268)||(9729305-9729559)
chr7 (20-268)||(9581453-9581707)
chr7 (20-268)||(4311279-4311532)
chr7 (20-268)||(8783498-8783752)
chr7 (105-268)||(14223144-14223313)
chr7 (21-158)||(23513736-23513873)
chr7 (21-148)||(4462117-4462244)
chr7 (21-154)||(5395811-5395944)
chr7 (21-158)||(12565670-12565807)
chr7 (21-158)||(13741088-13741225)
chr7 (21-161)||(10439748-10439888)
[»] chr1 (3 HSPs)
chr1 (20-268)||(27045424-27045672)
chr1 (54-152)||(22626469-22626567)
chr1 (21-157)||(21785853-21785986)
[»] chr6 (8 HSPs)
chr6 (20-268)||(22062920-22063168)
chr6 (20-268)||(19586983-19587222)
chr6 (21-158)||(18188979-18189116)
chr6 (21-169)||(23519161-23519309)
chr6 (21-147)||(17818194-17818320)
chr6 (20-158)||(18852688-18852822)
chr6 (20-65)||(29685293-29685338)
chr6 (21-62)||(24390285-24390326)
[»] chr3 (11 HSPs)
chr3 (20-268)||(6813419-6813667)
chr3 (20-271)||(12777913-12778170)
chr3 (20-268)||(15024254-15024508)
chr3 (21-157)||(20562017-20562153)
chr3 (21-157)||(20564325-20564461)
chr3 (21-157)||(20559709-20559845)
chr3 (21-158)||(13090217-13090351)
chr3 (21-158)||(9362367-9362501)
chr3 (21-158)||(13096380-13096514)
chr3 (21-140)||(20153465-20153581)
chr3 (20-66)||(3246922-3246968)
[»] scaffold0090 (1 HSPs)
scaffold0090 (20-268)||(29312-29566)
[»] chr8 (4 HSPs)
chr8 (20-268)||(20000852-20001103)
chr8 (21-157)||(20040479-20040615)
chr8 (21-161)||(21855186-21855323)
chr8 (21-157)||(17619412-17619545)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-268)||(51962-52216)
[»] chr5 (7 HSPs)
chr5 (20-268)||(23712116-23712370)
chr5 (21-152)||(20446255-20446386)
chr5 (21-144)||(18487473-18487596)
chr5 (21-158)||(21282320-21282458)
chr5 (21-147)||(23602050-23602173)
chr5 (21-158)||(24939200-24939334)
chr5 (21-141)||(24218516-24218633)
[»] scaffold0485 (1 HSPs)
scaffold0485 (20-268)||(11313-11568)
[»] chr2 (2 HSPs)
chr2 (21-158)||(24500997-24501134)
chr2 (21-166)||(25339516-25339661)
[»] scaffold0222 (1 HSPs)
scaffold0222 (21-144)||(18509-18632)
[»] scaffold0566 (1 HSPs)
scaffold0566 (21-157)||(1275-1411)
[»] scaffold0220 (1 HSPs)
scaffold0220 (39-158)||(11741-11860)
[»] scaffold0026 (1 HSPs)
scaffold0026 (54-158)||(17034-17138)
[»] scaffold0113 (1 HSPs)
scaffold0113 (21-158)||(38043-38177)
[»] scaffold0012 (2 HSPs)
scaffold0012 (21-147)||(12854-12977)
scaffold0012 (21-147)||(8745-8868)
[»] scaffold1184 (1 HSPs)
scaffold1184 (28-62)||(537-571)


Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 15349253 - 15349501
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15349253 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 15349352  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagtagtataaaagtttagataatagttctcatctatcctcttga 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15349353 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 15349452  T
Q  220 tcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15349453 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 15349501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 14687181 - 14687435
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||     
T  14687181 ttgtacctgtgggttagtaccaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaata 14687280  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||      |||||| |||||||||||||||||||| |||||||    
T  14687281 attctccatttatattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcc 14687380  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14687381 tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 14687435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 20 - 264
Target Start/End: Original strand, 42711184 - 42711434
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||     
T  42711184 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 42711283  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||||||||| |||||| ||||||||||| ||||||| || |||||      |||||| |||||| ||||||| || ||||||||||    
T  42711284 attctccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 42711383  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtga 264  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  42711384 tcttgatcctttgattcacactcaccctaaacctcttagcaataaaagtga 42711434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 11498023 - 11498159
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||| |   | |||    
T  11498023 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaattaacataattga 11498122  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| |||||||||||||||| || |||||||||    
T  11498123 ctctccactcatattggtaattgttagaagggtcatg 11498159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 45240267 - 45240404
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaa-ttagctctaatg 119  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| |  ||||| |||||||||||||| ||| |||||  || ||    
T  45240267 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 45240366  T
Q  120 attctccattcatattggtaattgtgagtagggtcatg 157  Q
    | |||||| ||||||||||||||||||| |||| ||||    
T  45240367 actctccactcatattggtaattgtgagaagggccatg 45240404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 18290824 - 18290701
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| | |||||||||||||||||| |||||||||||||||||||||||  |||| ||  || |||    
T  18290824 tgtacctgtgggttagtgccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaataaatttgcattattga 18290725  T
Q  121 ttctccattcatattggtaattgt 144  Q
     | |||| ||||||||||||||||    
T  18290724 atttccactcatattggtaattgt 18290701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 10629551 - 10629417
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||| ||| |||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  10629551 tgtacctgtgggttagtgccaacataaa---agttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 10629455  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| ||||||||| ||||||||| |||| |||||    
T  10629454 ctctccactcatattgggaattgtgagaagggccatgg 10629417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
Q  38 accaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg 137  Q
    ||||||||||| ||| ||||||||||||| ||| ||||| ||||| | ||||||||||||||||||| ||||||| ||| ||| | |||| |||||||||    
T  11918125 accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg 11918223  T
Q  138 taattgtgag 147  Q
    ||||||||||    
T  11918224 taattgtgag 11918233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 540168 - 540416
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  540168 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaatg 540267  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagtagtataaaagtttagataatagttctcatctatcctcttga 219  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  540268 attctcctttcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 540367  T
Q  220 tcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  540368 tcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 540416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 16327176 - 16327430
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||     
T  16327176 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 16327275  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||      |||||| ||||||||||||||||| || |||||||    
T  16327276 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 16327375  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  16327376 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 16327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 9729559 - 9729305
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  9729559 ttgtacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagttctaata 9729460  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    || |||||||||||||| |||||||||||| ||||||||||| ||||||| || |||||      |||||| |||||| ||||||| || ||||||||||    
T  9729459 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9729360  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  9729359 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 9729305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 9581707 - 9581453
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||     
T  9581707 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 9581608  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    || |||||||||||||| |||||||||||| ||||||||||| ||||||| || |||||      |||||| |||||| ||||||| || ||||||||||    
T  9581607 atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 9581508  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  9581507 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 9581453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 4311532 - 4311279
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  4311532 ttgtacatgtgggttagtaccaacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaata 4311433  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| || || |||||      |||||| |||| ||||||||||||| | |||||||    
T  4311432 attctccattcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc 4311333  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||| |||||||||||||| ||| ||||||| ||| |||||| ||||||||    
T  4311332 tcttgatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgat 4311279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 8783498 - 8783752
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||||| || ||||     
T  8783498 ttgtacatgtgggttagtaccaacataaagcaaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaata 8783597  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||| |||||||| |||||||||||||||| |||||||| ||||||| |  |||||      |||||| |||| ||||||||||||| | |||||||    
T  8783598 attctcctttcatatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatcc 8783697  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
     |||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||    
T  8783698 ccttgatccattgattcacactcaccccaaacttcctagcaataaaggtgatgat 8783752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 105 - 268
Target Start/End: Original strand, 14223144 - 14223313
Alignment:
Q  105 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagtagt------ataaaagtttagataat 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||      ||| |||||||||||||    
T  14223144 caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat 14223243  T
Q  199 agttctcatctatcctcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14223244 agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat 14223313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 23513873 - 23513736
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||  || ||||| ||||||||||||||||||||||| ||||||||||||||||||||  |||||||  || |||    
T  23513873 tgtacctgtgggttagtgccaacataaacaaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattga 23513774  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| |||||| |||||||||||| |||| |||||    
T  23513773 ctctccactcatataggtaattgtgagaagggccatgg 23513736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 21 - 148
Target Start/End: Original strand, 4462117 - 4462244
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| ||| ||||| |||   | ||||||||||||||||||||||| |||||||||||    
T  4462117 tgtaccagtgggttagtaccaatataaagcaaattttccaccaccttcgggttagttatgaacggattaggtagaataatcaaacaatgagctctaatga 4462216  T
Q  121 ttctccattcatattggtaattgtgagt 148  Q
    || || | |||||||||| |||||||||    
T  4462217 ttttctaatcatattggtcattgtgagt 4462244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 5395944 - 5395811
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  5395944 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 5395845  T
Q  121 ttctccattcatattggtaattgtgagtagggtc 154  Q
      ||||| |||| ||||||||||| || ||||||    
T  5395844 cgctccactcattttggtaattgttagaagggtc 5395811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 12565807 - 12565670
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||| ||||||||||||||||||||| ||| ||||| |||||||||| ||||||||| ||||||||||||  |||||||||  |||||||  || |||    
T  12565807 tgtaccggtgggttagtaccaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattga 12565708  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| |||||||||||||||| || |||| |||||    
T  12565707 ctctccactcatattggtaattgttagaagggccatgg 12565670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 13741225 - 13741088
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||| ||||| ||||||||||   | ||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||| |  || |||    
T  13741225 tgtacctgtggattagtgccaacataaacatagttttctaccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattga 13741126  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| ||||||||||||||||||| |||| |||||    
T  13741125 ctctccactcatattggtaattgtgagaagggccatgg 13741088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 10439748 - 10439888
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||| | | |||||||| |||||||||||||||||||||||  ||||| |  || |||    
T  10439748 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattga 10439847  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggtt 161  Q
     |||||| ||||||||||||||||||| ||||  |||||||    
T  10439848 ctctccactcatattggtaattgtgagaagggctatgggtt 10439888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 27045672 - 27045424
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27045672 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 27045573  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagtagtataaaagtttagataatagttctcatctatcctcttga 219  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27045572 attctccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 27045473  T
Q  220 tcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  27045472 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 27045424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 22626469 - 22626567
Alignment:
Q  54 ttttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtaggg 152  Q
    ||||| |||||| ||||||||||||| || |||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||||||||||| ||||    
T  22626469 ttttctaccaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaaggg 22626567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 21785853 - 21785986
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| |||||||||||||||| ||||||  |||||||  || |||    
T  21785853 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaagaaattagcattattga 21785949  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| |||| |||||| |||| || |||| ||||    
T  21785950 ctctccactcatgttggtacttgttagaagggccatg 21785986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 22062920 - 22063168
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22062920 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 22063019  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagtagtataaaagtttagataatagttctcatctatcctcttga 219  Q
    ||||||||| ||| ||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22063020 attctccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 22063119  T
Q  220 tcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||    
T  22063120 tcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 22063168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 19586983 - 19587222
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||               |||||||||||||||||||||||||||||     
T  19586983 ttgtacctgtgggttaataccaacataaatcaaattttccaccacctccagatta---------------ggtagaataatcaaacaattagctctaata 19587067  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||| || |||||||||||||| ||||||  |||||||| ||||||| || |||||      |||||| |||| |||||||||||||   |||||||    
T  19587068 attctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgagagtatataagtgtagataatagttcctctctatcc 19587167  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  19587168 tcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgat 19587222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 18188979 - 18189116
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||| | || |||||||||||||||||||| ||||||||  || |||    
T  18188979 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattga 18189078  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| ||||||||||||||||||| ||||||||||    
T  18189079 ctctccactcatattggtaattgtgagaagggtcatgg 18189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 21 - 169
Target Start/End: Original strand, 23519161 - 23519309
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||  ||| |||||||||||||||||||||||| ||| | |    
T  23519161 tgtacccgtgggttagttccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctattta 23519260  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggttttaaggaa 169  Q
     | |||   |||||||||| ||||||| ||||||||||||| |||||||    
T  23519261 ctttccgcacatattggtagttgtgagaagggtcatgggttataaggaa 23519309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 17818320 - 17818194
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  17818320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17818221  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     |||||| |||||||||||||||||||    
T  17818220 ctctccactcatattggtaattgtgag 17818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 158
Target Start/End: Complemental strand, 18852822 - 18852688
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||| ||||||||||   ||||||| |||| ||||||||||||||| ||||||||||||||||||||| || || || |  || |     
T  18852822 ttgtacctgtgggttagtgccaacataaa---aattttctaccatctccggattagtaatatctgaattaggtagaataatc-aagaaataacattattt 18852727  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgg 158  Q
    | |||||| ||||||||||||||||||| |||| |||||    
T  18852726 actctccactcatattggtaattgtgagaagggccatgg 18852688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 29685338 - 29685293
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacc 65  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  29685338 ttgtacctgtgggttagtactaacataaagcaaattttccaccacc 29685293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 24390285 - 24390326
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccacc 62  Q
    |||||||||  |||||||||| ||||||||||||||||||||    
T  24390285 tgtacctgtttgttagtaccagcataaagcaaattttccacc 24390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 6813667 - 6813419
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6813667 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 6813568  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagtagtataaaagtttagataatagttctcatctatcctcttga 219  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6813567 attctccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagtagtataaaagtttagataatagttctcatctatcctcttga 6813468  T
Q  220 tcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||    
T  6813467 tcccttgattcatactcacctcaaacttcttagcaataaaagtgatgat 6813419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 271
Target Start/End: Original strand, 12777913 - 12778170
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||     
T  12777913 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaata 12778012  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||| || |||||      |||| | |||||| ||||||| || || |||||||    
T  12778013 attctccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcc 12778112  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgatgtc 271  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  12778113 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagggatgatgtc 12778170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 15024508 - 15024254
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |     
T  15024508 ttgtacatgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaacaattagctctatta 15024409  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||      |||||| |||| ||||||||||| | | |||||||    
T  15024408 attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcc 15024309  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||||||||||||    
T  15024308 tcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatgat 15024254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 20562153 - 20562017
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| |||||||||||||||||||||||  ||||||   || |||    
T  20562153 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20562054  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20562053 ctctccactcatattggtaattgtgagaagggccatg 20562017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 20564461 - 20564325
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| |||||||||||||||||||||||  ||||||   || |||    
T  20564461 tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20564362  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20564361 ctctccactcatattggtaattgtgagaagggccatg 20564325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 20559845 - 20559709
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||| |||||||||||| |||||| ||| | | ||||| |||||||||| ||||||||| |||||||||||||||||||||||  ||||||   || |||    
T  20559845 tgtatctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20559746  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20559745 ctctccactcatattggtaattgtgagaagggccatg 20559709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 13090217 - 13090351
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  13090217 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 13090313  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  13090314 ctcaccactcatattgggaattgtgagaagggccatgg 13090351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 9362367 - 9362501
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| | |||||||||||||||||||||  |||||||  || |||    
T  9362367 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagcattattga 9362463  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| |||||||||  |||||||| |||| |||||    
T  9362464 ctctccactcatattggggattgtgagaagggccatgg 9362501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 13096514 - 13096380
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    |||||||||||||||||  |||||||||   | ||||| ||||||| |||||||||||| |||||||||||||||||||||||  ||||||   || |||    
T  13096514 tgtacctgtgggttagtgtcaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagaattattga 13096418  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| |||| |||| ||||||||| |||| |||||    
T  13096417 ctctccactcatgttgggaattgtgagaagggccatgg 13096380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 20153581 - 20153465
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||| ||||||| ||||||||||  || ||||| ||||||||| |||||| ||| ||||||   ||||||||||||||  |||||||   | |||    
T  20153581 tgtacctgtaggttagtgccaacataaacaaagttttctaccacctccagattaggaatatctgaa---ggtagaataatcaagaaattagcagcattga 20153485  T
Q  121 ttctccattcatattggtaa 140  Q
     |||||| ||||||||||||    
T  20153484 ctctccactcatattggtaa 20153465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 3246922 - 3246968
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacct 66  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||    
T  3246922 ttgtacctgtgggttagtacaaaaataaaacaaattttccaccacct 3246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 29566 - 29312
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  29566 ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaattagctctaatg 29467  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||      |||||||||||||||||||||||||||||||||||    
T  29466 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 29367  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  29366 tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat 29312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 20001103 - 20000852
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20001103 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg 20001004  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||      |||||||||||||||||||||||||||||||||||    
T  20001003 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc 20000904  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| |||   |||||||||||||||||||||    
T  20000903 tcttgatcccttgattcacactcaccccaaa---cttagcaataaaagtgatgat 20000852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 20040479 - 20040615
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| | | ||||| |||||||| ||||||||||| |||||||||||||||||||||||  ||||||   || |||    
T  20040479 tgtacctgtgggttagtgccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattga 20040578  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||||||||||||| |||| ||||    
T  20040579 ctctccactcatattggtaattgtgagaagggccatg 20040615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 21855186 - 21855323
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||| ||||||| ||||||||||   | ||||| ||||||| |||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  21855186 tgtacctgtaggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 21855282  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggtt 161  Q
     |||||| ||||||||||||||||||| ||||| |||||||    
T  21855283 ctctccactcatattggtaattgtgagaagggttatgggtt 21855323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 17619545 - 17619412
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  17619545 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 17619449  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| ||||||||| ||||||||| |||| ||||    
T  17619448 ctctccactcatattggaaattgtgagaagggccatg 17619412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 51962 - 52216
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||     
T  51962 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata 52061  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||      |||||| ||||||||||||||||| || |||||||    
T  52062 attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc 52161  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  52162 tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat 52216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 23712116 - 23712370
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatg 119  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||     
T  23712116 ttgtacctgtgggttaggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaata 23712215  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagt------agtataaaagtttagataatagttctcatctatcc 213  Q
    || ||||||||||||||||||||||||||| ||||||||||| ||||||| || |||||      |||||| |||||| ||||||| || ||||||||||    
T  23712216 atcctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc 23712315  T
Q  214 tcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    ||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  23712316 tcttgatcccttgattcacactcaccctaaacctcttagcaacaaaagtgatgat 23712370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 152
Target Start/End: Original strand, 20446255 - 20446386
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||| |||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  20446255 tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 20446354  T
Q  121 ttctccattcatattggtaattgtgagtaggg 152  Q
     |||||| ||||||||||||||||||| ||||    
T  20446355 ctctccactcatattggtaattgtgagaaggg 20446386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 144
Target Start/End: Original strand, 18487473 - 18487596
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||| |||||| |||| |||||||||||||||||||||||  |||||||  || |||    
T  18487473 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattga 18487572  T
Q  121 ttctccattcatattggtaattgt 144  Q
     |||||| ||||||||||||||||    
T  18487573 ctctccactcatattggtaattgt 18487596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 21282320 - 21282458
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaa-ttagctctaatg 119  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| |  ||||| |||||||||||||| ||| |||||  || ||    
T  21282320 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg 21282419  T
Q  120 attctccattcatattggtaattgtgagtagggtcatgg 158  Q
    | |||||| ||||||||||||||||||| ||||| ||||    
T  21282420 actctccactcatattggtaattgtgagaagggttatgg 21282458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 23602050 - 23602173
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| |||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  23602050 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 23602146  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     || ||| ||||||||| |||||||||    
T  23602147 ctcgccactcatattgggaattgtgag 23602173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 24939334 - 24939200
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||| || ||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  24939334 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagcattattga 24939238  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  24939237 ctcgccactcatattgggaattgtgagaagggccatgg 24939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 24218633 - 24218516
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||| ||||||||||| |||||||||    | ||||| |||| ||||||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  24218633 tgtacatgtgggttagtgccaacataat---agttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 24218537  T
Q  121 ttctccattcatattggtaat 141  Q
     |||||| |||||||||||||    
T  24218536 ctctccactcatattggtaat 24218516  T

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Target: scaffold0485 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 11313 - 11568
Alignment:
Q  20 ttgtacctgtgggttagtaccaacataaagcaaatttt-ccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaat 118  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  11313 ttgtacctgtgggttagtaccaacataaagcaaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaat 11412  T
Q  119 gattctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgaaaaagtag------tataaaagtttagataatagttctcatctatc 212  Q
     |||||||| ||||||||||||||||||||| ||||||||||| ||||||| || |||||||      |||| |||| ||||||||||||| | ||||||    
T  11413 aattctccactcatattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatc 11512  T
Q  213 ctcttgatcccttgattcacactcacccgaaacttcttagcaataaaagtgatgat 268  Q
    |||||||||||||||||||||||||||| ||||||  |||||||||| ||||||||    
T  11513 ctcttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatgat 11568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 24501134 - 24500997
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||  || |||    
T  24501134 tgtacctgtgggttagtgccaacataaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattga 24501035  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     |||||| | ||||||||||||||||| |||| |||||    
T  24501034 ctctccactaatattggtaattgtgagaagggccatgg 24500997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 25339516 - 25339661
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||| |||| |||||| ||||||||||| |||||||||||||||||| ||||||| ||||| | ||||||||||||||||||||||||||| ||| |||    
T  25339516 tgtacatgtgagttagtgccaacataaagaaaattttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattga 25339615  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgggttttaag 166  Q
       |||| |||||||||||||||||||| ||| |||| ||| ||||    
T  25339616 ccttccactcatattggtaattgtgagttgggccatgagttctaag 25339661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 21 - 144
Target Start/End: Complemental strand, 18632 - 18509
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  18632 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga 18533  T
Q  121 ttctccattcatattggtaattgt 144  Q
     |||||| ||||||||||||||||    
T  18532 ctctccactcatattggtaattgt 18509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 157
Target Start/End: Complemental strand, 1411 - 1275
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| |||||||||| ||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||  |||||||   | |||    
T  1411 tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattga 1312  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatg 157  Q
     |||||| |||||||||||||||| || |||||||||    
T  1311 ctctccactcatattggtaattgttagaagggtcatg 1275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 158
Target Start/End: Original strand, 11741 - 11860
Alignment:
Q  39 ccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggt 138  Q
    |||||||||| ||| ||||| ||||||||| |||||||||| || |||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||    
T  11741 ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt 11840  T
Q  139 aattgtgagtagggtcatgg 158  Q
    ||||||||| ||||||||||    
T  11841 aattgtgagaagggtcatgg 11860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 158
Target Start/End: Complemental strand, 17138 - 17034
Alignment:
Q  54 ttttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggt 153  Q
    ||||| |||||||| | ||||||||| || |||||||||||||||||||| ||||||||  || ||| |||||| ||||||||||||||||||| |||||    
T  17138 ttttctaccacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaagggt 17039  T
Q  154 catgg 158  Q
    |||||    
T  17038 catgg 17034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 158
Target Start/End: Original strand, 38043 - 38177
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| |||||||  | ||||||||| |||||||||||||||||||||||  |||||||  || |||    
T  38043 tgtacctgtgggttagtgccaacataaa---agttttctaccaccttagaattagtaatatctgaattaggtagaataatcaagaaattagcattattga 38139  T
Q  121 ttctccattcatattggtaattgtgagtagggtcatgg 158  Q
     || ||| ||||||||| ||||||||| |||| |||||    
T  38140 ctcgccactcatattggaaattgtgagaagggccatgg 38177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 12854 - 12977
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||||||||||||||| ||||||||||   | ||||| ||||||||| |||||||||| ||| | |||||||||||||| |   |||||||  || |||    
T  12854 tgtacctgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga 12950  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     |||| | |||||||||||| ||||||    
T  12951 ctctctactcatattggtaactgtgag 12977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 8745 - 8868
Alignment:
Q  21 tgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagctctaatga 120  Q
    ||||| ||||||||||| ||||||||||   | ||||| ||||||||| |||||||||| ||| | |||||||||||||| |   |||||||  || |||    
T  8745 tgtacatgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga 8841  T
Q  121 ttctccattcatattggtaattgtgag 147  Q
     |||| | |||||||||||| ||||||    
T  8842 ctctctactcatattggtaactgtgag 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 62
Target Start/End: Original strand, 537 - 571
Alignment:
Q  28 gtgggttagtaccaacataaagcaaattttccacc 62  Q
    |||||||||||||||||||||||||||||||||||    
T  537 gtgggttagtaccaacataaagcaaattttccacc 571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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