View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15828_low_1 (Length: 563)
Name: NF15828_low_1
Description: NF15828
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15828_low_1 |
 |  |
|
| [»] scaffold1749 (1 HSPs) |
 |  |  |
|
| [»] scaffold0428 (1 HSPs) |
 |  |  |
|
| [»] scaffold0363 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 325; Significance: 0; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 11 - 530
Target Start/End: Original strand, 12188503 - 12189020
Alignment:
| Q |
11 |
aagatccttccctagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactagct |
110 |
Q |
| |
|
|||||| | |||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
12188503 |
aagatcttcccctagtagcttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaagaagcaactacct |
12188602 |
T |
 |
| Q |
111 |
tcatatatggaagataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaatagttctaacctcgcttgaat |
210 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| | |
|
|
| T |
12188603 |
tcatatctggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgagt |
12188702 |
T |
 |
| Q |
211 |
cattttttaataatgattcaatgcttgaatagttttcatctggtatgaacaaacatctaagttcattggtatacttttgattcagattttgggaaactac |
310 |
Q |
| |
|
||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| |||| | |
|
|
| T |
12188703 |
catcttttaaaaatgattcaatgcttgaatagtcttcatctggtatgaacaaacatctaagctcatttgtatacttttgattcaatttttggagaactgc |
12188802 |
T |
 |
| Q |
311 |
tttgatgatgtcttcaatcaagtcattttcagtcctaaaatataagaatactgataaatgttagtatataaaaggagactataaattagttaataattag |
410 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
12188803 |
tttgatgatgtctccaatcaagtcagattcagtcctaaaatataagaatac-gataaatgttagagtataaaaggattctataaattagttaataattag |
12188901 |
T |
 |
| Q |
411 |
acgatacaatataattcaagaaaatttgtatccattttataaccaaagaaagaaataccaaatagaatactaaaaaatgatcatccccat-tttctaaga |
509 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||| | |||||| |||||||| || ||| ||||| |
|
|
| T |
12188902 |
aggatacaatataattcaagaaaatttgtatccattttataacc-aagaaagaaatagcaagtagaataat-aaaaattatcatccctatatttgtaaga |
12188999 |
T |
 |
| Q |
510 |
aacaaatcgttcaaaagtgta |
530 |
Q |
| |
|
|||||||| || |||| |||| |
|
|
| T |
12189000 |
aacaaatcatttaaaaatgta |
12189020 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 11 - 530
Target Start/End: Original strand, 12432931 - 12433448
Alignment:
| Q |
11 |
aagatccttccctagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactagct |
110 |
Q |
| |
|
|||||| | |||||||| || |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |
|
|
| T |
12432931 |
aagatcttcccctagtagcttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaagaagcaactacct |
12433030 |
T |
 |
| Q |
111 |
tcatatatggaagataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaatagttctaacctcgcttgaat |
210 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| | |
|
|
| T |
12433031 |
tcatatctggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgagt |
12433130 |
T |
 |
| Q |
211 |
cattttttaataatgattcaatgcttgaatagttttcatctggtatgaacaaacatctaagttcattggtatacttttgattcagattttgggaaactac |
310 |
Q |
| |
|
||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| |||| | |
|
|
| T |
12433131 |
catcttttaaaaatgattcaatgcttgaatagtcttcatctggtatgaacaaacatctaagctcatttgtatacttttgattcaatttttggagaactgc |
12433230 |
T |
 |
| Q |
311 |
tttgatgatgtcttcaatcaagtcattttcagtcctaaaatataagaatactgataaatgttagtatataaaaggagactataaattagttaataattag |
410 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
12433231 |
tttgatgatgtctccaatcaagtcagattcagtcctaaaatataagaatac-gataaatgttagagtataaaaggattctataaattagttaataattag |
12433329 |
T |
 |
| Q |
411 |
acgatacaatataattcaagaaaatttgtatccattttataaccaaagaaagaaataccaaatagaatactaaaaaatgatcatccccat-tttctaaga |
509 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||| | |||||| |||||||| || ||| ||||| |
|
|
| T |
12433330 |
aggatacaatataattcaagaaaatttgtatccattttataacc-aagaaagaaatagcaagtagaataat-aaaaattatcatccctatatttgtaaga |
12433427 |
T |
 |
| Q |
510 |
aacaaatcgttcaaaagtgta |
530 |
Q |
| |
|
|||||||| || |||| |||| |
|
|
| T |
12433428 |
aacaaatcatttaaaaatgta |
12433448 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 11 - 370
Target Start/End: Original strand, 12177182 - 12177541
Alignment:
| Q |
11 |
aagatccttccctagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactagct |
110 |
Q |
| |
|
|||||| | ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
12177182 |
aagatcttcccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
12177281 |
T |
 |
| Q |
111 |
tcatatatggaagataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaatagttctaacctcgcttgaat |
210 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
12177282 |
tcatacatggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgaat |
12177381 |
T |
 |
| Q |
211 |
cattttttaataatgattcaatgcttgaatagttttcatctggtatgaacaaacatctaagttcattggtatacttttgattcagattttgggaaactac |
310 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| ||| | |
|
|
| T |
12177382 |
ctacttttaataatgattcaatgcttgaatagttttcatctggtatgaacaagcatctaagttcatttgtatacttttgattcaatttttggaggactgc |
12177481 |
T |
 |
| Q |
311 |
tttgatgatgtcttcaatcaagtcattttcagtcctaaaatataagaatactgataaatg |
370 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
12177482 |
tttgatgatgtctccaatcaagtcagcttcagtcctaaaatataagaatacagataaatg |
12177541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 11 - 370
Target Start/End: Original strand, 12421610 - 12421969
Alignment:
| Q |
11 |
aagatccttccctagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactagct |
110 |
Q |
| |
|
|||||| | ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
12421610 |
aagatcttcccctagtaacttagaaagaagtctgttgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactacct |
12421709 |
T |
 |
| Q |
111 |
tcatatatggaagataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaatagttctaacctcgcttgaat |
210 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
12421710 |
tcatacatggaagataccttctgaaatatggcagcagcaagggttgtctttcctatgcctcccatgccccaaattccaatagttctaacttctcttgaat |
12421809 |
T |
 |
| Q |
211 |
cattttttaataatgattcaatgcttgaatagttttcatctggtatgaacaaacatctaagttcattggtatacttttgattcagattttgggaaactac |
310 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| ||| | |
|
|
| T |
12421810 |
ctacttttaataatgattcaatgcttgaatagttttcatctggtatgaacaagcatctaagttcatttgtatacttttgattcaatttttggaggactgc |
12421909 |
T |
 |
| Q |
311 |
tttgatgatgtcttcaatcaagtcattttcagtcctaaaatataagaatactgataaatg |
370 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||| |
|
|
| T |
12421910 |
tttgatgatgtctccaatcaagtcagcttcagtcctaaaatataagaatacagataaatg |
12421969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 6310342 - 6310529
Alignment:
| Q |
3 |
tcaataccaagatccttccct-agtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaag |
101 |
Q |
| |
|
|||||| ||||||| |||||| ||||||| ||||| ||| || || |||||||| ||| |||||||||||||||| ||||||| || ||||||| |||| |
|
|
| T |
6310342 |
tcaatatcaagatc-ttccctgagtaacttggaaagaagtttgttgcatgtgtaattgatcccatgtctctttgatacttctgttaccttttctaagaag |
6310440 |
T |
 |
| Q |
102 |
caactagcttcatatatggaagataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaat |
190 |
Q |
| |
|
||||| |||||||| | |||| ||| | ||||| || | |||||||||||||||||| ||| | |||||||| ||||||| |||||| |
|
|
| T |
6310441 |
caactgccttcatatttaaaagagaccctttgaaacatagcagcagcaagggttgtcttacctgtgcctcccataccccaaagtccaat |
6310529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 190
Target Start/End: Complemental strand, 32633496 - 32633309
Alignment:
| Q |
3 |
tcaataccaagatccttccctagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagc |
102 |
Q |
| |
|
|||||| ||||||| | || |||||||| |||||| ||| || || || || || ||| ||||| || |||||| ||||||| |||||||||| ||||| |
|
|
| T |
32633496 |
tcaatatcaagatcttcccttagtaacttagaaagaagtttgttgcatatgaaattgattccatgcctttttgatacttctgtcacattttctaagaagc |
32633397 |
T |
 |
| Q |
103 |
aactagcttcatatatggaagataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaat |
190 |
Q |
| |
|
|||| ||||||| || |||| ||| | ||||| | | |||||||||||||||||| ||||| || ||||||||||||| |||||| |
|
|
| T |
32633396 |
aactgccttcatacttgaaagagaccctttgaaacaaagcagcagcaagggttgtcttacctatgccccccatgccccaaagtccaat |
32633309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 259
Target Start/End: Complemental strand, 5549998 - 5549762
Alignment:
| Q |
23 |
tagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactagcttcatatatggaa |
122 |
Q |
| |
|
|||||||| |||||| ||| || || |||||||| ||| ||| | || |||||| ||||||| || ||||| | ||||||||| | |||||| || || |
|
|
| T |
5549998 |
tagtaacttagaaagaagtttgttgcatgtgtaattgattccacgactttttgatacttctgtaaccttttcaaagaagcaactgccatcatatttgaaa |
5549899 |
T |
 |
| Q |
123 |
gataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaatagttctaacctcgcttgaatcattttttaata |
222 |
Q |
| |
|
|| ||| | ||||| || | || |||||||||||||| || || |||||||| ||||||| |||||| || ||| || |||||||| ||||| || |
|
|
| T |
5549898 |
gagaccctttgaaacatagcagtggcaagggttgtcttaccaatgcctcccataccccaaactccaatgatttgaacttctgttgaatcaaattttatta |
5549799 |
T |
 |
| Q |
223 |
atgattcaatgcttgaatagttttcatctggtatgaa |
259 |
Q |
| |
|
| |||| |||||| |||||||||||| |||||||| |
|
|
| T |
5549798 |
aagattgaatgctccgatagttttcatcaggtatgaa |
5549762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 190
Target Start/End: Original strand, 6062740 - 6062778
Alignment:
| Q |
152 |
ggttgtctttcctatacctcccatgccccaaattccaat |
190 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
6062740 |
ggttgtctttcctattcctcccatgccccaaattccaat |
6062778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 259
Target Start/End: Original strand, 5607931 - 5608167
Alignment:
| Q |
23 |
tagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactagcttcatatatggaa |
122 |
Q |
| |
|
|||||||| | |||| ||| || || |||||||| ||| ||||| || |||||| ||||||| || || || | ||||||||| | |||||| || || |
|
|
| T |
5607931 |
tagtaacttacaaagaagtttgttgcatgtgtaattgattccatgactttttgatacttctgtcaccttctcaaagaagcaactgccatcatatttgaaa |
5608030 |
T |
 |
| Q |
123 |
gataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaatagttctaacctcgcttgaatcattttttaata |
222 |
Q |
| |
|
|| ||| | ||||| || | || |||||||||||||| ||||| |||||||| ||||||| |||||| || ||| || |||| ||| ||||| || |
|
|
| T |
5608031 |
gagaccctttgaaacatagcagtggcaagggttgtcttacctatgcctcccataccccaaagtccaatgatttgaacttctgttgagtcaaattttatta |
5608130 |
T |
 |
| Q |
223 |
atgattcaatgcttgaatagttttcatctggtatgaa |
259 |
Q |
| |
|
| |||| || ||| ||||||||||||| |||||||| |
|
|
| T |
5608131 |
aagattgaacgctccaatagttttcatcaggtatgaa |
5608167 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 259
Target Start/End: Complemental strand, 5627439 - 5627203
Alignment:
| Q |
23 |
tagtaactgagaaagtagtctgctgtatgtgtaactgagcccatgtctctttgattcttctgtgacattttctaggaagcaactagcttcatatatggaa |
122 |
Q |
| |
|
|||||||| | |||| ||| || || |||||||| ||| ||||| || |||||| ||||||| || || || | ||||||||| | |||||| || || |
|
|
| T |
5627439 |
tagtaacttacaaagaagtttgttgcatgtgtaattgattccatgactttttgatacttctgtcaccttctcaaagaagcaactgccatcatatttgaaa |
5627340 |
T |
 |
| Q |
123 |
gataccttctgaaatatggtagcagcaagggttgtctttcctatacctcccatgccccaaattccaatagttctaacctcgcttgaatcattttttaata |
222 |
Q |
| |
|
|| ||| | ||||| || | || |||||||||||||| ||||| |||||||| ||||||| |||||| || ||| || |||| ||| ||||| || |
|
|
| T |
5627339 |
gagaccctttgaaacatagcagtggcaagggttgtcttacctatgcctcccataccccaaagtccaatgatttgaacttctgttgagtcaaattttatta |
5627240 |
T |
 |
| Q |
223 |
atgattcaatgcttgaatagttttcatctggtatgaa |
259 |
Q |
| |
|
| |||| || ||| ||||||||||||| |||||||| |
|
|
| T |
5627239 |
aagattgaacgctccaatagttttcatcaggtatgaa |
5627203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 189
Target Start/End: Original strand, 6071826 - 6071863
Alignment:
| Q |
152 |
ggttgtctttcctatacctcccatgccccaaattccaa |
189 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
6071826 |
ggttgtctttcccataccgcccatgccccaaattccaa |
6071863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 190
Target Start/End: Complemental strand, 14404803 - 14404759
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattccaat |
190 |
Q |
| |
|
||||||||||||||| ||| | |||||||| |||||||||||||| |
|
|
| T |
14404803 |
agcaagggttgtcttacctgtgcctcccataccccaaattccaat |
14404759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 23455160 - 23455203
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattccaa |
189 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| ||||||| |
|
|
| T |
23455160 |
agcaagggttgtctttcctatgccacccatgccccatattccaa |
23455203 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 33264700 - 33264746
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattccaatag |
192 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||||||||| |||| |
|
|
| T |
33264700 |
agcaagggttgtcttccctattcctcccatcccccaaattcctatag |
33264746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 33412004 - 33412050
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattccaatag |
192 |
Q |
| |
|
||||||||||||||||||||| || ||||| || ||||||||||||| |
|
|
| T |
33412004 |
agcaagggttgtctttcctattccgcccattccacaaattccaatag |
33412050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 17438857 - 17438811
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattccaatag |
192 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||||||||| |||| |
|
|
| T |
17438857 |
agcaagggttgtcttccctattcctcccatcccccaaattcctatag |
17438811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 50 - 91
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattcc |
187 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
50 |
agcaagggttgtcttccctattcctcccatcccccaaattcc |
91 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 8811 - 8852
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattcc |
187 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
8811 |
agcaagggttgtcttccctattcctcccatcccccaaattcc |
8852 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0363 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0363
Description:
Target: scaffold0363; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 146 - 190
Target Start/End: Original strand, 14050 - 14094
Alignment:
| Q |
146 |
agcaagggttgtctttcctatacctcccatgccccaaattccaat |
190 |
Q |
| |
|
||||||||||||||| ||| | |||||||| |||||||||||||| |
|
|
| T |
14050 |
agcaagggttgtcttacctgtgcctcccataccccaaattccaat |
14094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University