View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15831_high_24 (Length: 297)
Name: NF15831_high_24
Description: NF15831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15831_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 279
Target Start/End: Original strand, 1726748 - 1727026
Alignment:
| Q |
1 |
tagcgtgtgtttaccaagtttagtaggtggtaactattcggttcaagtaaagtaaatagtaaaaaattcaaatcgtgactctatcaaatagaattttggc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1726748 |
tagcgtgtgtttaccaagtttagtaggtggtaactattcggttcaaataaagtaaatagtaaaaaattcaaatcgtgactctatcaaatagaattttggc |
1726847 |
T |
|
| Q |
101 |
aggcactatctagtggagattagatctctcaagttgattaaaacttattcaaatcgcgactctttcaaataatggtgatacttagcacacatgagtaaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1726848 |
aggcactatctagtggagattagatctctcaagttgattaaaacttattcaaatcgtgactctttcaaataatggtgatacttagcacacatgagtaaga |
1726947 |
T |
|
| Q |
201 |
gatttaatttggttaattatgttttgcgatgagctcgtgacaatattttttaggttaaatagctgctggagatcaaact |
279 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1726948 |
gatttaatttgattaattatgttttgcgatgagctcgtgacaatattttttaggttaaatagctgctggagatcaaact |
1727026 |
T |
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