View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15831_low_18 (Length: 404)
Name: NF15831_low_18
Description: NF15831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15831_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 4 - 375
Target Start/End: Original strand, 11742187 - 11742573
Alignment:
| Q |
4 |
tttactagtgatagataattctcaccttctgaattgnnnnnnnaagaattgagttagatctaatccaaattttaagacgatatcaacgc-----cgagat |
98 |
Q |
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| T |
11742187 |
tttactaatgatagataattctcaccttatgaattgttttttcaagaattgagttagatctaatccaaattttaagacgatatcaacgcatgtccaagat |
11742286 |
T |
|
| Q |
99 |
ccattatgcctcattttatcgggtctctcgctattaggccactcag----------cactgtagttgtccagtcctagaagtgagaaggtgtgttaccga |
188 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||||||||||||||||||||||||||| |
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| T |
11742287 |
ccattatgcctcattttatcgggtctctcgctattagaccactcagtattagttaacagtgtagttgtccaatcctagaagtgagaaggtgtgttaccgg |
11742386 |
T |
|
| Q |
189 |
tttcaccggatgccacctcttatcaagtctttcgttatcaggccattcagattacactccaactgtctatatgtctataagtggtgaatatttcctcatt |
288 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||||||||||||||| |
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| T |
11742387 |
tttcaccggatgccacctcttatcaggtctttcgttatcaggccattcagataacactctacctgtctatgtgtctataagtggtgaatatttcctcatt |
11742486 |
T |
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| Q |
289 |
ttaaaagcaatatctcatccaatagctcttagagtcggttactatatatatcttagttaaaaattaaatcattaaaagtggtcggat |
375 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||| |
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| T |
11742487 |
ttaaaagcaatatctcatccaatagctcttagagtcggttaccatatatatcttaattaaaaattaaatcagtaaaagtggtcggat |
11742573 |
T |
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