View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15831_low_30 (Length: 319)
Name: NF15831_low_30
Description: NF15831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15831_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 2 - 304
Target Start/End: Complemental strand, 26452331 - 26452029
Alignment:
| Q |
2 |
ccaacaaaatcgatgctctagttacaatacacaactaagcctctaaaaccaaaggtttgaaaaattggcaggttttttacaagaacttttcttagatcat |
101 |
Q |
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| T |
26452331 |
ccaacaaaatcgatgctctagttacaatacacaactaagcctctaaaaccaaaggtttgaaaaattggcaggttttttacaagtacttttcttagatcat |
26452232 |
T |
|
| Q |
102 |
tttcacaacccaaagcttatattttctaacatacaaatacacaagacaaggtcctataagatttgcttcagacagtgacttacaaagcttgatataaaga |
201 |
Q |
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| T |
26452231 |
tttcacaacccaaagcttatattttctaacatacaaatacacaagacaaggtcctataagatttgcttcagacagtgacttacaaagcttgatataaaga |
26452132 |
T |
|
| Q |
202 |
tctaaatttccatattgctgtatccttttccttaaaccttgcataacagcaactctatccaaatactcaggatagaatcccaattcaagcattttcatca |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
26452131 |
tctaaatttccatattgctgtatccttttccttaaaccttgcataacagcaactctatccaaatactcaggatagaatcccaattcaagcattttcatta |
26452032 |
T |
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| Q |
302 |
cag |
304 |
Q |
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||| |
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| T |
26452031 |
cag |
26452029 |
T |
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