View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15832_low_3 (Length: 371)

Name: NF15832_low_3
Description: NF15832
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15832_low_3
NF15832_low_3
[»] chr1 (6 HSPs)
chr1 (1-355)||(52435932-52436281)
chr1 (4-147)||(11084976-11085121)
chr1 (4-147)||(33063082-33063227)
chr1 (4-120)||(45598675-45598792)
chr1 (4-148)||(40312539-40312685)
chr1 (58-147)||(17038982-17039072)
[»] chr7 (14 HSPs)
chr7 (4-149)||(12560529-12560676)
chr7 (4-147)||(48796938-48797081)
chr7 (4-142)||(3285623-3285763)
chr7 (4-148)||(30226765-30226911)
chr7 (4-151)||(14976129-14976276)
chr7 (4-151)||(15405605-15405752)
chr7 (9-141)||(7620783-7620917)
chr7 (4-120)||(11559848-11559965)
chr7 (4-147)||(11629336-11629468)
chr7 (54-115)||(4541991-4542052)
chr7 (54-151)||(9567661-9567758)
chr7 (69-149)||(4793891-4793971)
chr7 (100-151)||(2077306-2077357)
chr7 (69-151)||(42783537-42783620)
[»] chr5 (7 HSPs)
chr5 (4-148)||(34404749-34404895)
chr5 (4-151)||(17920101-17920249)
chr5 (4-147)||(7897233-7897377)
chr5 (4-148)||(20497467-20497613)
chr5 (4-148)||(26182550-26182696)
chr5 (4-148)||(20287258-20287404)
chr5 (100-148)||(11205526-11205574)
[»] chr8 (9 HSPs)
chr8 (4-142)||(8730627-8730767)
chr8 (4-147)||(18676487-18676631)
chr8 (4-147)||(17880055-17880200)
chr8 (4-151)||(17280584-17280733)
chr8 (4-147)||(33465478-33465622)
chr8 (4-148)||(39081603-39081749)
chr8 (11-141)||(22876721-22876853)
chr8 (16-149)||(37154840-37154974)
chr8 (54-111)||(23250488-23250545)
[»] chr4 (9 HSPs)
chr4 (10-151)||(11324581-11324724)
chr4 (4-147)||(24143830-24143975)
chr4 (4-134)||(19894143-19894275)
chr4 (9-149)||(22555675-22555818)
chr4 (4-147)||(23541939-23542084)
chr4 (9-142)||(46738584-46738719)
chr4 (4-147)||(15687016-15687162)
chr4 (4-103)||(11905786-11905886)
chr4 (58-149)||(25353949-25354041)
[»] chr3 (6 HSPs)
chr3 (4-148)||(8749736-8749882)
chr3 (4-148)||(9037402-9037548)
chr3 (10-147)||(9030738-9030877)
chr3 (68-147)||(11560808-11560888)
chr3 (54-149)||(13920274-13920369)
chr3 (67-148)||(7478479-7478560)
[»] chr2 (6 HSPs)
chr2 (4-147)||(29566709-29566854)
chr2 (4-147)||(18766375-18766520)
chr2 (4-147)||(18605913-18606058)
chr2 (12-147)||(13314282-13314419)
chr2 (71-147)||(20068793-20068870)
chr2 (100-149)||(25347959-25348008)
[»] scaffold0328 (1 HSPs)
scaffold0328 (9-142)||(16293-16428)
[»] chr6 (7 HSPs)
chr6 (9-147)||(19216656-19216796)
chr6 (4-148)||(9385311-9385457)
chr6 (9-148)||(16136896-16137037)
chr6 (4-147)||(20003780-20003925)
chr6 (4-120)||(32452684-32452801)
chr6 (23-120)||(15002505-15002603)
chr6 (70-152)||(12444058-12444141)
[»] scaffold0143 (1 HSPs)
scaffold0143 (4-147)||(36994-37139)
[»] scaffold0032 (1 HSPs)
scaffold0032 (9-120)||(103609-103721)
[»] scaffold0022 (1 HSPs)
scaffold0022 (70-150)||(3884-3965)
[»] scaffold0645 (1 HSPs)
scaffold0645 (68-147)||(1807-1887)
[»] scaffold0480 (1 HSPs)
scaffold0480 (54-151)||(11951-12048)
[»] scaffold0034 (1 HSPs)
scaffold0034 (54-148)||(50204-50298)
[»] scaffold0520 (1 HSPs)
scaffold0520 (54-142)||(5738-5826)
[»] scaffold0064 (1 HSPs)
scaffold0064 (54-115)||(45295-45356)


Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 52436281 - 52435932
Alignment:
Q  1 gttgatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcact 99  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52436281 gttgattccttaaataaaatagtgcgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcact 52436182  T
Q  100 tgaatatttgttttaggcaaag-cgaagccaatatataaatatctaacaatctttttgccgaatattaattattgattgatttctctattcactgttctt 198  Q
    |||||||||||||||||||||  | ||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52436181 tgaatatttgttttaggcaaaaacaaagccaatatacaaatatccaacaatttttttgccgaatattaattattgattgatttctctattcactgttctt 52436082  T
Q  199 aatcaacatacaactacaaatagaggcgacgacaaacacacaaggaaatatttgaagnnnnnnnnnnnnnggattataaaaaatctatataactgactcc 298  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |             ||||||||||||||||||||||||||||||    
T  52436081 aatcaacatacaactacaaatagaggcaacgacaaacacacaaggaaatatttgatg-------ttttttggattataaaaaatctatataactgactcc 52435989  T
Q  299 ggttagtgagatacaacttgcttannnnnnnaaaggggaataaaatttggttattgt 355  Q
    ||||||||||||||||||||||||       ||||||||||||||||||||||||||    
T  52435988 ggttagtgagatacaacttgcttatttttttaaaggggaataaaatttggttattgt 52435932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 11085121 - 11084976
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  11085121 gattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggttaactgaaccatgccaggatgttggcacatcgtgttcaacatctcacatga 11085022  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| |||||||||||||||||||| ||||    
T  11085021 atatttgttttaggcaaaagtgaagccaatatataaatatccaaca 11084976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 33063082 - 33063227
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  33063082 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcacatga 33063181  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||| | |||| ||||| |||||| ||||||| ||||    
T  33063182 atatttgttttagacaaaagtgaagctaatatacaaatatccaaca 33063227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 45598792 - 45598675
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||| |||| |||||||||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | |    
T  45598792 gattccttaaataaaacagcgtgtgcgtaaaacaagacagggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcacataa 45598693  T
Q  103 atatttgttttaggcaaa 120  Q
    ||||||||||||| ||||    
T  45598692 atatttgttttagccaaa 45598675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 40312685 - 40312539
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||| ||||||| || ||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| ||||||||||| |||    
T  40312685 gattccttaattaaaataacgtgtgtgtaaaacaaggcaaggtgcaggtcaactgaaccatgccaggatgttggcacatcttgtacaacatctcacatga 40312586  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    |||||  |||||||| |||| ||||||||| || ||||||| |||||    
T  40312585 atattaattttaggcaaaagtgaagccaatctacaaatatccaacaa 40312539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 17038982 - 17039072
Alignment:
Q  58 aaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||| ||||    
T  17038982 aaccatgcctggatgttggcacatcgtgttcaacatctcacatgaatatttgttttaggcaaaagtgaagccaatatacaaatatccaaca 17039072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 4 - 149
Target Start/End: Complemental strand, 12560676 - 12560529
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  12560676 gattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtggaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcacatga 12560577  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaat 149  Q
    ||||||||||||||| |||| |||| ||||||| ||||||| ||||||    
T  12560576 atatttgttttaggcaaaagtgaagtcaatatacaaatatccaacaat 12560529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 48797081 - 48796938
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  48797081 gattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctca--tga 48796984  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    |||||| |||||||| |||| |||||||||||| ||||||| ||||    
T  48796983 atatttattttaggcaaaagtgaagccaatatacaaatatccaaca 48796938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 142
Target Start/End: Complemental strand, 3285763 - 3285623
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||| | |    
T  3285763 gattccttaaataaaatagcacgtgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaggatgttggcatatcgtgttcaacatctcacataa 3285664  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatc 142  Q
    ||||||||||||||| |||| |||| ||||||| |||||||    
T  3285663 atatttgttttaggcaaaagtgaagtcaatatacaaatatc 3285623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 30226765 - 30226911
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||| |||||||| |||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||| ||||||||| | |||    
T  30226765 gattccttaaatataatagcgcatgcgtaaaacaaggcagggtgcaggtcaactgaatcatgccaggatgttggcacatcgtgtccaacatctcccatga 30226864  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    ||||||||||||||| |||| |||||||||||| ||||||| |||||    
T  30226865 atatttgttttaggcaaaagtgaagccaatatacaaatatccaacaa 30226911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 14976129 - 14976276
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||| ||||| |||||||||||||||||||||||  || ||    
T  14976129 gattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaagtcaactaaaccatgccaggatattggcacatcgtgttcaacatct--ctcga 14976226  T
Q  103 atatttgttttagg-caaagcgaagccaatatataaatatctaacaatct 151  Q
    ||||||||||||||  |||| |||||||||||| ||||||| ||||||||    
T  14976227 atatttgttttaggaaaaagtgaagccaatatacaaatatccaacaatct 14976276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 15405605 - 15405752
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||| ||||| |||||||||||||||||||||||  || ||    
T  15405605 gattccttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaagtcaactaaaccatgccaggatattggcacatcgtgttcaacatct--ctcga 15405702  T
Q  103 atatttgttttagg-caaagcgaagccaatatataaatatctaacaatct 151  Q
    ||||||||||||||  |||| |||||||||||| ||||||| ||||||||    
T  15405703 atatttgttttaggaaaaagtgaagccaatatacaaatatccaacaatct 15405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 7620783 - 7620917
Alignment:
Q  9 cttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatt 107  Q
    |||||||||||||||||||||||||||||||||| | || | |||||| ||||| ||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  7620783 cttaaataaaatagcgcgtgcgtaaaacaaggcaggatgcatgtcaaccgaaccttgccaggatgttgacacatcgtgtttaacatctcacatgaatatt 7620882  T
Q  108 tgttttaggc-aaagcgaagccaatatataaatat 141  Q
    | |||||||| |||  |||||||||||| ||||||    
T  7620883 tattttaggcaaaaatgaagccaatatacaaatat 7620917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 11559965 - 11559848
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||  | |||||||| ||||||||||||| |  ||||||||| |||||||| ||||| |||| ||||||||| |||||||||||||||    
T  11559965 gattccttaaataaataaacgcgtgcgaaaaacaaggcaagctataggtcaactaaaccatgccaggatattggaacatcgtgtccaacatctcacttga 11559866  T
Q  103 atatttgttttaggcaaa 120  Q
    ||||||||||||||||||    
T  11559865 atatttgttttaggcaaa 11559848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 11629336 - 11629468
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||| ||||||| |||| |||||||||||||||||||||| |||||||||||||||||| ||||             ||||||||||||||| |||    
T  11629336 gattcctttaataaaaaagcgtgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgccagga-------------tgttcaacatctcacatga 11629422  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| |||||||||||| ||||||| ||||    
T  11629423 atatttgttttaggcaaaagtgaagccaatatacaaatatccaaca 11629468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 4542052 - 4541991
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttag 115  Q
    |||||||||||| |||||||||| |||| |||| ||||||| ||||||||||||||||||||    
T  4542052 actgaaccatgccaggatgttggaacatggtgtccaacatcacacttgaatatttgttttag 4541991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 9567661 - 9567758
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaatct 151  Q
    |||||||  ||| |||||||||| ||||||| | ||||||| ||| ||||||||||||||||  |||| || ||||| | | ||||||| ||||||||    
T  9567661 actgaactgtgctaggatgttggaacatcgtatccaacatcacacatgaatatttgttttagcaaaagtgaggccaacacacaaatatccaacaatct 9567758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 4793971 - 4793891
Alignment:
Q  69 gatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaat 149  Q
    |||||||| ||||||| | ||||||| ||| ||||||||||||||||  |||| |||||||| | | ||||||| ||||||    
T  4793971 gatgttggaacatcgtatccaacatcacacatgaatatttgttttagcaaaagtgaagccaacacacaaatatccaacaat 4793891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 151
Target Start/End: Original strand, 2077306 - 2077357
Alignment:
Q  100 tgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaatct 151  Q
    |||||||||||||||||||||  |||||||| ||| ||||||| ||||||||    
T  2077306 tgaatatttgttttaggcaaaaagaagccaacatacaaatatccaacaatct 2077357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 42783537 - 42783620
Alignment:
Q  69 gatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaacaatct 151  Q
    |||||||| |||| |||||| |||||| |  |||||||||||||||||| |||| |||||||| ||| ||||||| | ||||||    
T  42783537 gatgttggaacattgtgttccacatctgaagtgaatatttgttttaggcaaaagtgaagccaacatacaaatatccatcaatct 42783620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 9e-49; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 34404895 - 34404749
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  34404895 gattccttaaataaaatagcgcgtgcgtaaaacaaggaagggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcacatga 34404796  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    ||||||||||||||| |||| |||||||||||| ||||||| |||||    
T  34404795 atatttgttttaggcaaaagtgaagccaatatacaaatatccaacaa 34404749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 17920249 - 17920101
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||  ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  17920249 gattccttaaataaaatagcgcgtgctaaaaacaaggca-ggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcacatga 17920151  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaatct 151  Q
    ||||||||||||||| |||| |||||||||||| ||||||| ||||||||    
T  17920150 atatttgttttaggcaaaagtgaagccaatatacaaatatccaacaatct 17920101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 7897377 - 7897233
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||||| |||| ||||||||| |||||||||||||||||||||| |||    
T  7897377 gattccttaaataaaatagcgcgtgcgtaaaactaggtaaggtgcaggtcaactgaac-atgccaggatgttgacacatcgtgttcaacatctcacatga 7897279  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| || ||||||||| ||||||| ||||    
T  7897278 atatttgttttaggcaaaagtgacgccaatatacaaatatccaaca 7897233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 20497613 - 20497467
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||| ||||||||||||||||| |||| |||||||||||||||| | | |||||||||||||| ||| ||||||||||| |||    
T  20497613 gattccttaaataaaatagcgagtgcgtaaaacaaggcagggtgcaggtcaactgaaccataccaagatgttggcacatcttgtacaacatctcacatga 20497514  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    |||||| |||||||| |||| |||||||||||| ||||||| |||||    
T  20497513 atatttattttaggcaaaagtgaagccaatataaaaatatccaacaa 20497467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 148
Target Start/End: Complemental strand, 26182696 - 26182550
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||| | || |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||   |||    
T  26182696 gattccttaaataaaatggtgcatgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcctatga 26182597  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    ||||||||||||||| |||| |||| ||||||| ||||||| |||||    
T  26182596 atatttgttttaggcaaaagtgaagtcaatatacaaatatccaacaa 26182550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 20287258 - 20287404
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||||||  |||||||||||||| ||||    
T  20287258 gattccttaaataaaatagcgcgtgcgaaaaacaaggcagggtggaggtcaactgaaccatgccaggatgttggcacattatgttcaacatctcatttga 20287357  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    |||||| |||||  | |||| |||||||| ||| ||||||| |||||    
T  20287358 atatttattttatacaaaagtgaagccaacatacaaatatccaacaa 20287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 11205526 - 11205574
Alignment:
Q  100 tgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaa 148  Q
    |||||||||||||||||||||  |||||||| ||| ||||||| |||||    
T  11205526 tgaatatttgttttaggcaaaaagaagccaacatacaaatatccaacaa 11205574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 8730627 - 8730767
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||    
T  8730627 gattgcttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaggatgttgtcacatcgtgttcaacatctcacatga 8730726  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatc 142  Q
    ||||||||||||||| |||| |||| ||||||| |||||||    
T  8730727 atatttgttttaggcaaaagtgaagtcaatatacaaatatc 8730767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 18676487 - 18676631
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtgaggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaa 103  Q
    |||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  18676487 gattccttaaataaaatagcacgtgcgtaaaacaaggcagggtcaggtcaactgaaccatgccaggatgttggcacatcgtgctcaacatctcacatgaa 18676586  T
Q  104 tatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    |||||||||||||| |||| |||  ||||||| ||||||||||||    
T  18676587 tatttgttttaggcaaaagtgaaatcaatatacaaatatctaaca 18676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 17880200 - 17880055
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||| ||     
T  17880200 gattccttagataaaatagcgcgtgcgtaaaacaaggcaaggtgcaggtcaactgaaccatgccaagatgttggcacatcgtgttcaacatctcacatgc 17880101  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| |||||||||||| ||| ||| ||||    
T  17880100 atatttgttttaggcaaaagtgaagccaatatacaaagatccaaca 17880055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 151
Target Start/End: Original strand, 17280584 - 17280733
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||| |||||||||||||||  | |||||||||||||||| | ||||||| |||||| ||||||||||||||| |||    
T  17280584 gattccttaaataaaatagcgcgtgcgaaaaacaaggcaaggtacaagtcaactgaaccatgccatgatgttgacacatcttgttcaacatctcacatga 17280683  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaatct 151  Q
    ||||||||||||||| |||| |||||||||||| ||||||| || |||||    
T  17280684 atatttgttttaggcaaaagtgaagccaatatacaaatatccaagaatct 17280733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 33465622 - 33465478
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  33465622 gattccttaaataaaataatgcgtgcgaaaaacaaggcaaggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgtccaacatctcacttga 33465523  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    |||||| |||||||| |||| |||||||| ||| ||||||| ||||    
T  33465522 atattt-ttttaggcaaaagtgaagccaacatacaaatatccaaca 33465478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 39081603 - 39081749
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||||||||| |||||||||||||||| |||| ||||||||| |||||||  ||||||||| |||  ||||||||||||||||| |||    
T  39081603 gattccttaaataaaatagcgcatgcgtaaaacaaggcagggtgcaggtcaactaaaccatgtcaggatgttgacacgccgtgttcaacatctcacatga 39081702  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    |||||| |||||||| |||| |||||||||||| ||||||| |||||    
T  39081703 atatttattttaggcaaaagtgaagccaatatacaaatatccaacaa 39081749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 11 - 141
Target Start/End: Original strand, 22876721 - 22876853
Alignment:
Q  11 taaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttg 109  Q
    ||||||||| | | |||||| |||||||||||||||| || ||||||||||||||| |||||||||| ||||| ||| ||||||||||||| ||||||||    
T  22876721 taaataaaaaaacacgtgcgaaaaacaaggcaaggtgcagatcaactgaaccatgccaggatgttgggacatcttgtccaacatctcacttaaatatttg 22876820  T
Q  110 ttttaggc-aaagcgaagccaatatataaatat 141  Q
    |||||||| |||| |||||||| ||||||||||    
T  22876821 ttttaggcaaaagtgaagccaacatataaatat 22876853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 37154974 - 37154840
Alignment:
Q  16 aaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgtttta 114  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||  | | |||||||||||||    
T  37154974 aaaatagcgcgtgcgtaaaacaacgcagggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatct-gcattaatatttgtttta 37154876  T
Q  115 gg-caaagcgaagccaatatataaatatctaacaat 149  Q
    ||  |||  |||||||||||| | ||||| ||||||    
T  37154875 ggtaaaaatgaagccaatatacatatatccaacaat 37154840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 111
Target Start/End: Original strand, 23250488 - 23250545
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgtt 111  Q
    |||||||||||| |||||||||| ||||||||| ||| ||| ||||||||||||||||    
T  23250488 actgaaccatgccaggatgttggaacatcgtgtccaatatcacacttgaatatttgtt 23250545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 1e-44; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 11324724 - 11324581
Alignment:
Q  10 ttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatattt 108  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | |||||||||||||| ||| ||||||||||| |||||||||    
T  11324724 ttaaataaaatagcgcgtgcgtaaaacaaggcagggtgcaggtcaactgaaccatgccaagatgttggcacatcttgtacaacatctcacatgaatattt 11324625  T
Q  109 gttttaggc-aaagcgaagccaatatataaatatctaacaatct 151  Q
    ||||||||| |||| |||||||||||| ||||||| ||||||||    
T  11324624 gttttaggcaaaagtgaagccaatatacaaatatccaacaatct 11324581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 24143830 - 24143975
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||  |||    
T  24143830 gattccttaaataaaatagcgcgtgcgaaaaactaggcaaggtgtaggtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcatatga 24143929  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| |||| ||||||| ||||||| ||||    
T  24143930 atatttgttttaggcaaaagtgaagtcaatatacaaatatccaaca 24143975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 19894275 - 19894143
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| |||    
T  19894275 gattccttaaataaaatagcgcgtgtgtaaaacaaggcagggtgcaggtcaactgaatcatgccaggatgttggcacatcgtgttcaacatctcacatga 19894176  T
Q  103 atatttgttttaggc-aaagcgaagccaatata 134  Q
    ||||||||||||||| |||| ||||||||||||    
T  19894175 atatttgttttaggcaaaagtgaagccaatata 19894143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 22555675 - 22555818
Alignment:
Q  9 cttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaacca-tgcaaggatgttggcacatcgtgttcaacatctcacttgaatat 106  Q
    |||||||||||| |||| |||||||||||||||| |||| ||||||||||||||| ||| | |||||||||||||| ||| ||||||||||| |||||||    
T  22555675 cttaaataaaattgcgcatgcgtaaaacaaggcagggtgcaggtcaactgaaccaatgccaagatgttggcacatcttgtacaacatctcacatgaatat 22555774  T
Q  107 ttgttttaggc-aaagcgaagccaatatataaatatctaacaat 149  Q
    ||||||||||| |||| |||||||||||| ||||||| ||||||    
T  22555775 ttgttttaggcaaaagtgaagccaatatacaaatatccaacaat 22555818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 23541939 - 23542084
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||  ||||||| |||||||||| | ||||||| |||||| ||||||||||||||| |||    
T  23541939 gattccttaaataaaataacgcgtgcgaaaaacaaggcaaagtacaggtcaattgaaccatgccatgatgttgacacatcttgttcaacatctcacatga 23542038  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| |||||||||||| ||||||| ||||    
T  23542039 atatttgttttaggcaaaagtgaagccaatatacaaatatccaaca 23542084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 46738719 - 46738584
Alignment:
Q  9 cttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatt 107  Q
    ||||||||||| |||| ||||||||||||| | | | || |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  46738719 cttaaataaaaaagcgtgtgcgtaaaacaaagtaggatgcaggtcaactgaaccatgtcaggatgttggcacatcgtgttcaacatctcacatgaatatt 46738620  T
Q  108 tgttttagg-caaagcgaagccaatatataaatatc 142  Q
    |||||||||  |||| |||| ||||||| |||||||    
T  46738619 tgttttaggtaaaagtgaagacaatatacaaatatc 46738584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 15687162 - 15687016
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtca-actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttg 101  Q
    |||| ||||||||||  | | ||||||||||||||||||||||  ||| || || ||||||||| |||||||||| ||||||||| ||||||| ||||||    
T  15687162 gattccttaaataaacaaacacgtgcgtaaaacaaggcaaggtacagggcataccgaaccatgccaggatgttggaacatcgtgtacaacatcacacttg 15687063  T
Q  102 aatatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    |||||||||||||||| |||| |||||||| ||| ||||||| ||||    
T  15687062 aatatttgttttaggcaaaagtgaagccaacatacaaatatccaaca 15687016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 11905786 - 11905886
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtga-ggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||  | |||||| |||||||||||||||||   ||||||||||||||||| |||||||||| ||||||||| |||||||||| ||||    
T  11905786 gattccttaaataaataaacgcgtgtgtaaaacaaggcaaggtaccggtcaactgaaccatgccaggatgttggaacatcgtgtccaacatctcatttga 11905885  T
Q  103 a 103  Q
    |    
T  11905886 a 11905886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 149
Target Start/End: Complemental strand, 25354041 - 25353949
Alignment:
Q  58 aaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaacaat 149  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||||||  |||||||| |||| |||| ||||||| ||||||| ||||||    
T  25354041 aaccatgcctggatgttggcacatcgtgttcaacatctcacatgaatattcattttaggcaaaagtgaaggcaatatacaaatatccaacaat 25353949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 5e-44; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 8749736 - 8749882
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||| || ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  8749736 gattccttaaataaaatagagcatgcgtaaaacaaggcaaggtgcaagtcaactgaaccatgccaggatgttggcacatcatgttcaacatctcacatga 8749835  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    ||||||||||||||| |||| |||||||||||| ||||||| |||||    
T  8749836 atatttgttttaggcaaaagtgaagccaatatacaaatatccaacaa 8749882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 9037402 - 9037548
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  9037402 gattccttaaataaaatagtgcgtgcgtaaaacaaggcaaggtgcacgtcaactgaaccatgccaggatgttggcacatcgtgttcaacatctcacatga 9037501  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    |||||||||| |||| |||| ||| ||||| || ||||||| |||||    
T  9037502 atatttgtttgaggcaaaagtgaaaccaatgtacaaatatccaacaa 9037548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 9030877 - 9030738
Alignment:
Q  10 ttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatattt 108  Q
    |||||||||||||||||||| |||||| || ||  ||| || ||||||||||||||| ||||||||| |||||||||||||| ||||||| |||||||||    
T  9030877 ttaaataaaatagcgcgtgcataaaacgagacagtgtgcagatcaactgaaccatgccaggatgttgacacatcgtgttcaatatctcacatgaatattt 9030778  T
Q  109 gttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||| |||| |||||||||||||||||||| ||||    
T  9030777 gttttaggcaaaagtgaagccaatatataaatatccaaca 9030738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 11560888 - 11560808
Alignment:
Q  68 ggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| || |||| |||||||||||| ||| ||| ||||    
T  11560888 ggatgttggcacatcgtgttcaacatctcacatgaatattcgttttaagcaaaagtgaagccaatatacaaacatccaaca 11560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 13920274 - 13920369
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaat 149  Q
    |||||||  ||| |||||||| | ||||||| | ||||||| ||| ||||||||||||||||  |||| |||||||| | | ||||||||||||||    
T  13920274 actgaactgtgctaggatgttagaacatcgtatccaacatcacacatgaatatttgttttagcaaaagtgaagccaacacacaaatatctaacaat 13920369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 7478560 - 7478479
Alignment:
Q  67 aggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaa 148  Q
    |||||||||| ||||||| | ||||||| ||| ||||||||||||||||  ||||  ||||||| | | ||||||| |||||    
T  7478560 aggatgttggaacatcgtatccaacatcacacatgaatatttgttttagcaaaagtaaagccaacacacaaatatccaacaa 7478479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 29566709 - 29566854
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  29566709 gattccttaaataaaataacgcgtgcgaaaaacaaggcaatgtgcaggtcaactgaaccatgccaggatgttggcacattgtgtccaacatctcacttga 29566808  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| |||||||| ||||||||||| ||||    
T  29566809 atatttgttttaggcaaaagtgaagccaacatataaatatccaaca 29566854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 18766375 - 18766520
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||| ||||||||||||||| |||    
T  18766375 gattccttaaataaaatagcgcgtgcgtaaaacaaggtaaggtgcaggtcaactgaaccatggcaggatgttggcacatcatgttcaacatctcacatga 18766474  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||| | |||| |||| ||||||| ||||||| ||||    
T  18766475 atatttgttttagacaaaagtgaagtcaatatacaaatatccaaca 18766520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 18606058 - 18605913
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||| |||||||| | ||||||||||||||| | |||| ||||||| ||||| |||| |||||||||||||||||||||||||||||||| |||    
T  18606058 gattccttaagtaaaatagtgtgtgcgtaaaacaaggtagggtgcaggtcaattgaactatgccaggatgttggcacatcgtgttcaacatctcacatga 18605959  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||| |||| |||||||||||| ||||||| ||||    
T  18605958 atatttgttttaggcaaaagtgaagccaatatacaaatatccaaca 18605913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 13314419 - 13314282
Alignment:
Q  12 aaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgt 110  Q
    |||||||||| |||||| | |||||||||||||||| |||||||||||||||| | | |||||||||||||| ||| |||||||||||||||||||||||    
T  13314419 aaataaaataacgcgtgtgaaaaacaaggcaaggtgcaggtcaactgaaccattccaagatgttggcacatcatgtccaacatctcacttgaatatttgt 13314320  T
Q  111 tttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||| |||| |||||||| ||| ||||||| ||||    
T  13314319 tttaggcaaaagtgaagccaacatacaaatatccaaca 13314282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 20068870 - 20068793
Alignment:
Q  71 tgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    |||||||||||||| ||||||||||||| | |||||||||||||| | |||| |||||||||||| ||||||| ||||    
T  20068870 tgttggcacatcgttttcaacatctcacataaatatttgttttagacaaaagtgaagccaatatacaaatatccaaca 20068793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 25347959 - 25348008
Alignment:
Q  100 tgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaat 149  Q
    ||||||||||||||||  |||| || ||||||||||||||||||||||||    
T  25347959 tgaatatttgttttagcaaaagtgaggccaatatataaatatctaacaat 25348008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 9 - 142
Target Start/End: Complemental strand, 16428 - 16293
Alignment:
Q  9 cttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatt 107  Q
    ||||||||||||||||||||||||||| |||||| |||| |||| || |||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  16428 cttaaataaaatagcgcgtgcgtaaaataaggcagggtgcaggttaattgaaccatgctaggatgttggcacatcgtgttcaacatctcacatgaatatt 16329  T
Q  108 tgttttaggc-aaagcgaagccaatatataaatatc 142  Q
    | |||||||| |||| |||||||||||| |||||||    
T  16328 tattttaggcaaaagtgaagccaatatacaaatatc 16293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 5e-38; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 19216656 - 19216796
Alignment:
Q  9 cttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatt 107  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  19216656 cttaaataaaatagcgcgtgcgtaaaataaggcagggtgcaggtcaacttaaccatgccaggatattggcacatcgtgttcaacatctcacatgaatatt 19216755  T
Q  108 tgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    | |||||||| |||| |||||||||| | ||||||| ||||    
T  19216756 tattttaggcaaaagtgaagccaatagacaaatatccaaca 19216796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 9385311 - 9385457
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||| ||| || |||| |||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9385311 gattccttaaataaactagtgcatgcgaaaaacaaggcaaggtccaggtcaactgaaccatgcagggatgttggcacatcgtgtccaacatctcacttga 9385410  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    |||||||||||| || |||| ||| |||||||| ||||||| |||||    
T  9385411 atatttgttttaagcaaaagtgaatccaatatacaaatatccaacaa 9385457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 16137037 - 16136896
Alignment:
Q  9 cttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatt 107  Q
    |||||||||||||| ||||  |||||||||||||  ||| |||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  16137037 cttaaataaaatagtgcgtctgtaaaacaaggcagagtgcaggtcaactgaaccatgacaggatgttggcacatcgtgttcaacatctcacatgaatatt 16136938  T
Q  108 tgttttaggc-aaagcgaagccaatatataaatatctaacaa 148  Q
    |||||| ||| |||| |||||||||||| ||||||| |||||    
T  16136937 tgtttttggcaaaagtgaagccaatatacaaatatccaacaa 16136896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 20003780 - 20003925
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||| | ||||||| |||||||| ||||||||| |||||||||||||||||| ||| |||    
T  20003780 gattccttaaataaaaaagcgcatgcgtaaaacaaggcaaggtgcaagtcaactaaaccatgctaggatgttgacacatcgtgttcaacatcccacatga 20003879  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    |||||| |||||||| |||| |||||||||||| ||||||| ||||    
T  20003880 atatttcttttaggcaaaagtgaagccaatatacaaatatccaaca 20003925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 32452684 - 32452801
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| ||||||||||||| |||||| | ||||||||||||| || | |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  32452684 gattccttaaataaaataacgcgtgggaaaaacaaggcaagatgcatgtcaactgaaccatgccaggatgttggcacatcgtgtccaacatctcacttga 32452783  T
Q  103 atatttgttttaggcaaa 120  Q
    |||||| |||||||||||    
T  32452784 atatttattttaggcaaa 32452801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 15002603 - 15002505
Alignment:
Q  23 cgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaa 120  Q
    |||||||| |||||||||||| ||| |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15002603 cgcgtgcgaaaaacaaggcaatgtgcaggtcaactgaaccatgccacgatgttggcacatcgtgtccaacatctcacttgaatatttgttttaggcaaa 15002505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 12444141 - 12444058
Alignment:
Q  70 atgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaacaatctt 152  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||| |||| |||||||||||| ||||||| |||| ||||    
T  12444141 atgttggcacatcatgttcaacatctcacatgaatattcgttttaggcaaaagtgaagccaatatacaaatatccaacactctt 12444058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 36994 - 37139
Alignment:
Q  4 gatttcttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttga 102  Q
    |||| |||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  36994 gattccttaaataaaataatgcgtgcgaaaaacaaggcaaggtgcaggtcaactgaaccatgccaggatgttggcacatcgtgtccaacatctcacttga 37093  T
Q  103 atatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||  || |||||||| |||| |||||||| ||| ||||||| ||||    
T  37094 attatttttttaggcaaaagtgaagccaacatacaaatatccaaca 37139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 103609 - 103721
Alignment:
Q  9 cttaaataaaatagcgcgtgcgtaaaacaaggcaaggtg-aggtcaactgaaccatgcaaggatgttggcacatcgtgttcaacatctcac-ttgaatat 106  Q
    ||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||| || || || | | ||||||||||| ||||||||    
T  103609 cttaaataaaataacgcgtgcg-aaaacaaggcaaggtgcaggtcaactgaaccatgccaggatgtaggaacgtcatatccaacatctcactttgaatat 103707  T
Q  107 ttgttttaggcaaa 120  Q
    ||||||||||||||    
T  103708 ttgttttaggcaaa 103721  T

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Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 3884 - 3965
Alignment:
Q  70 atgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaacaatc 150  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||| ||||||| |||||||    
T  3884 atgttggtacatcgtcttcaacatctcacatgaatatttgttttaggcaaaagtgaagccaatatacaaatatccaacaatc 3965  T

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Target: scaffold0645 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 1807 - 1887
Alignment:
Q  68 ggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggc-aaagcgaagccaatatataaatatctaaca 147  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| || |||| |||||||||||| ||| ||| ||||    
T  1807 ggatgttggcacatcgtgttcaacatctcacatgaatattcgttttaagcaaaagtgaagccaatatacaaacatccaaca 1887  T

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Target: scaffold0480 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 11951 - 12048
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaatct 151  Q
    |||||||| ||| |||||||||  ||||||||| ||||||| ||||||| ||||||||||||  |||| | || ||| ||| ||||||| ||||||||    
T  11951 actgaaccgtgccaggatgttgaaacatcgtgtccaacatcacacttgattatttgttttagcaaaagtgcagtcaacatacaaatatccaacaatct 12048  T

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Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 50298 - 50204
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaagcgaagccaatatataaatatctaacaa 148  Q
    |||||||  ||| |||||||||| ||||||| | ||||||| ||| ||||||||||||||||  |||| |||||||| | | ||||||| |||||    
T  50298 actgaactgtgctaggatgttggaacatcgtatccaacatcacacatgaatatttgttttagcaaaagtgaagccaacacacaaatatccaacaa 50204  T

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Target: scaffold0520 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 5738 - 5826
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttaggcaaagcgaagccaatatataaatatc 142  Q
    |||||||||||| |||||||||| ||||| | | |||||||  |  ||||||||||||||||| |||| ||||| |||||  |||||||    
T  5738 actgaaccatgccaggatgttggaacatcatatccaacatcatatatgaatatttgttttaggaaaagtgaagctaatattcaaatatc 5826  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 45356 - 45295
Alignment:
Q  54 actgaaccatgcaaggatgttggcacatcgtgttcaacatctcacttgaatatttgttttag 115  Q
    |||||||||||| | |||||||| ||||||| | |||||||  || ||||||||||||||||    
T  45356 actgaaccatgccaagatgttggaacatcgtatccaacatcatacatgaatatttgttttag 45295  T

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