View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15833_low_14 (Length: 254)
Name: NF15833_low_14
Description: NF15833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15833_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 26926014 - 26925776
Alignment:
| Q |
1 |
ctctgctgcagccagtgtcgtgatttacatgacactgactgacaattctgaaaactatctagtcttcagaaatacttgctaaatgaggcctccatattcc |
100 |
Q |
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| T |
26926014 |
ctctgccgcagccagtgtcgtgatt---atgacactggctgacaattctgaaaaccatttaatcttcagaaatacttgctaaatgaggcctccatattcc |
26925918 |
T |
|
| Q |
101 |
aacacgacctttcttgcgatcccgtcttgaggatttcttctccttatattgcaagggtgatgttgatgagtaaaaacaatcaccatccccactaccatca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26925917 |
aacacgacctttcttgcgatcccgtcttgaggatttcttctccttatattgcaagggtgatgttgatgagtaaaaacaatcaccatccccactaccatca |
26925818 |
T |
|
| Q |
201 |
ttctcatgatcaccatcatcaccgtgcttggtgcttcatttc |
242 |
Q |
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||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26925817 |
ttctcatgatcaccatcatcaccgtgcttggtgcttcttttc |
26925776 |
T |
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