View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15835_low_7 (Length: 250)

Name: NF15835_low_7
Description: NF15835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15835_low_7
NF15835_low_7
[»] chr6 (23 HSPs)
chr6 (1-240)||(4409193-4409432)
chr6 (22-238)||(7968479-7968695)
chr6 (1-237)||(12738495-12738731)
chr6 (1-240)||(15119684-15119921)
chr6 (1-237)||(23574394-23574629)
chr6 (1-235)||(29094980-29095214)
chr6 (1-235)||(18728923-18729157)
chr6 (21-237)||(14910605-14910822)
chr6 (2-230)||(18736007-18736235)
chr6 (23-237)||(29482591-29482805)
chr6 (1-237)||(24438524-24438760)
chr6 (21-240)||(8306061-8306276)
chr6 (21-237)||(18258578-18258794)
chr6 (38-237)||(19860052-19860251)
chr6 (2-236)||(18014422-18014656)
chr6 (147-240)||(18043337-18043430)
chr6 (52-235)||(15318993-15319175)
chr6 (1-153)||(17756981-17757133)
chr6 (52-209)||(15349643-15349800)
chr6 (1-115)||(21508602-21508716)
chr6 (52-208)||(15369639-15369795)
chr6 (55-173)||(23524128-23524246)
chr6 (43-237)||(3876330-3876512)
[»] scaffold0034 (1 HSPs)
scaffold0034 (14-240)||(47392-47618)
[»] chr8 (19 HSPs)
chr8 (1-240)||(2085706-2085945)
chr8 (1-240)||(18040445-18040683)
chr8 (21-237)||(32008997-32009213)
chr8 (4-237)||(18573984-18574220)
chr8 (1-237)||(7999650-7999884)
chr8 (21-237)||(7454650-7454866)
chr8 (52-240)||(10532804-10532992)
chr8 (1-237)||(24033762-24034001)
chr8 (21-237)||(41280794-41281008)
chr8 (16-237)||(25820717-25820937)
chr8 (1-233)||(24060562-24060794)
chr8 (43-233)||(11709372-11709562)
chr8 (135-235)||(33273604-33273704)
chr8 (21-237)||(22609476-22609692)
chr8 (155-237)||(1788651-1788732)
chr8 (189-240)||(17775705-17775756)
chr8 (1-93)||(10532704-10532796)
chr8 (1-75)||(17775782-17775855)
chr8 (12-113)||(33273497-33273598)
[»] chr2 (12 HSPs)
chr2 (1-240)||(23755782-23756021)
chr2 (1-240)||(3770257-3770496)
chr2 (21-240)||(25133917-25134136)
chr2 (3-240)||(41266163-41266399)
chr2 (3-237)||(42534088-42534322)
chr2 (21-237)||(23929797-23930013)
chr2 (4-186)||(26154949-26155131)
chr2 (22-237)||(3105204-3105419)
chr2 (21-235)||(19092723-19092937)
chr2 (32-237)||(27347171-27347374)
chr2 (44-237)||(29568315-29568507)
chr2 (158-240)||(26159154-26159236)
[»] chr1 (12 HSPs)
chr1 (21-240)||(19967402-19967621)
chr1 (1-240)||(19442075-19442313)
chr1 (1-237)||(9858967-9859207)
chr1 (21-237)||(8990745-8990961)
chr1 (21-230)||(8995422-8995630)
chr1 (4-237)||(24973854-24974085)
chr1 (21-237)||(21817722-21817937)
chr1 (2-228)||(38621812-38622038)
chr1 (96-237)||(22186045-22186185)
chr1 (1-88)||(21815520-21815607)
chr1 (133-237)||(21815619-21815722)
chr1 (21-88)||(49472352-49472419)
[»] chr4 (20 HSPs)
chr4 (2-240)||(12885277-12885514)
chr4 (1-240)||(3268331-3268570)
chr4 (21-240)||(3270543-3270762)
chr4 (21-240)||(10985697-10985915)
chr4 (1-207)||(17282454-17282660)
chr4 (1-237)||(13861314-13861549)
chr4 (1-237)||(25239695-25239930)
chr4 (1-240)||(21332508-21332746)
chr4 (21-237)||(12217561-12217771)
chr4 (21-237)||(9901685-9901901)
chr4 (21-237)||(45313147-45313362)
chr4 (95-235)||(8082047-8082186)
chr4 (95-234)||(49402695-49402834)
chr4 (46-222)||(26780824-26781000)
chr4 (1-160)||(16396230-16396389)
chr4 (172-237)||(18284661-18284724)
chr4 (44-237)||(28891910-28892105)
chr4 (95-215)||(34845515-34845635)
chr4 (177-237)||(10422047-10422106)
chr4 (147-237)||(15455441-15455530)
[»] chr7 (17 HSPs)
chr7 (1-237)||(29164849-29165084)
chr7 (5-240)||(21802447-21802682)
chr7 (1-235)||(30770152-30770384)
chr7 (37-240)||(9548968-9549171)
chr7 (21-240)||(20093533-20093752)
chr7 (21-237)||(47295665-47295880)
chr7 (1-240)||(22705602-22705835)
chr7 (1-237)||(2249955-2250192)
chr7 (21-237)||(21592861-21593076)
chr7 (1-235)||(18153131-18153364)
chr7 (21-227)||(7595360-7595565)
chr7 (32-237)||(18185625-18185829)
chr7 (131-239)||(22703894-22704002)
chr7 (43-174)||(38612620-38612751)
chr7 (95-237)||(28794085-28794226)
chr7 (39-171)||(30764982-30765114)
chr7 (45-86)||(21801853-21801894)
[»] scaffold0989 (1 HSPs)
scaffold0989 (21-240)||(1505-1724)
[»] scaffold0002 (2 HSPs)
scaffold0002 (1-237)||(391459-391696)
scaffold0002 (1-236)||(380763-380997)
[»] chr5 (18 HSPs)
chr5 (12-237)||(28067999-28068223)
chr5 (1-240)||(5931187-5931426)
chr5 (1-237)||(23495349-23495583)
chr5 (1-237)||(20899560-20899795)
chr5 (1-240)||(8244508-8244751)
chr5 (1-237)||(36712614-36712848)
chr5 (2-237)||(5590662-5590896)
chr5 (21-225)||(15620175-15620379)
chr5 (44-237)||(22922645-22922838)
chr5 (13-237)||(41037621-41037854)
chr5 (13-237)||(42792481-42792705)
chr5 (46-237)||(22922050-22922241)
chr5 (69-237)||(38608267-38608435)
chr5 (21-231)||(33622474-33622686)
chr5 (1-88)||(13537878-13537965)
chr5 (1-121)||(22510097-22510217)
chr5 (38-165)||(19329925-19330052)
chr5 (199-237)||(19330054-19330092)
[»] scaffold0170 (1 HSPs)
scaffold0170 (1-237)||(16280-16516)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-236)||(30021-30256)
[»] scaffold0058 (2 HSPs)
scaffold0058 (2-236)||(1609-1843)
scaffold0058 (95-237)||(15365-15507)
[»] scaffold0280 (1 HSPs)
scaffold0280 (21-234)||(1024-1237)
[»] chr3 (10 HSPs)
chr3 (1-237)||(22915052-22915286)
chr3 (16-237)||(16852987-16853208)
chr3 (14-166)||(19790346-19790498)
chr3 (156-240)||(1998003-1998087)
chr3 (43-237)||(16914706-16914900)
chr3 (162-237)||(19773386-19773462)
chr3 (155-235)||(22006495-22006574)
chr3 (155-235)||(22014012-22014091)
chr3 (147-237)||(3559228-3559317)
chr3 (95-123)||(11578849-11578877)
[»] scaffold0008 (2 HSPs)
scaffold0008 (38-237)||(253313-253512)
scaffold0008 (21-237)||(242673-242889)
[»] scaffold0026 (1 HSPs)
scaffold0026 (21-237)||(151275-151490)
[»] scaffold0042 (2 HSPs)
scaffold0042 (16-235)||(68675-68894)
scaffold0042 (37-237)||(74845-75045)
[»] scaffold0362 (1 HSPs)
scaffold0362 (21-237)||(7334-7548)
[»] scaffold0083 (1 HSPs)
scaffold0083 (25-237)||(4184-4396)
[»] scaffold0265 (3 HSPs)
scaffold0265 (21-237)||(14872-15087)
scaffold0265 (1-88)||(17202-17289)
scaffold0265 (133-237)||(17087-17190)
[»] scaffold0084 (1 HSPs)
scaffold0084 (10-204)||(54576-54770)
[»] scaffold0192 (1 HSPs)
scaffold0192 (23-237)||(12323-12535)
[»] scaffold0111 (1 HSPs)
scaffold0111 (21-237)||(2814-3029)
[»] scaffold0096 (1 HSPs)
scaffold0096 (1-237)||(10836-11071)
[»] scaffold0299 (1 HSPs)
scaffold0299 (127-240)||(19147-19260)
[»] scaffold0025 (1 HSPs)
scaffold0025 (99-237)||(86424-86562)
[»] scaffold0013 (1 HSPs)
scaffold0013 (53-237)||(37242-37425)
[»] scaffold0011 (1 HSPs)
scaffold0011 (92-208)||(20339-20455)
[»] scaffold0063 (2 HSPs)
scaffold0063 (95-237)||(49284-49425)
scaffold0063 (97-237)||(36839-36978)
[»] scaffold0483 (1 HSPs)
scaffold0483 (37-124)||(9247-9335)


Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4409432 - 4409193
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  4409432 cacccctttcacgcaaggggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctatgcacgttcccgcaataaacgccctagcggtt 4409333  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||    
T  4409332 acacttctcacgattttgtaaccgccagagcaaggtgtgccattgtaacggctttgcagccctccacctctataaatagaggattcaatgcagtccccaa 4409233  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4409232 ggtagaatctatctcttcctctaaaccctcactctctctg 4409193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 22 - 238
Target Start/End: Original strand, 7968479 - 7968695
Alignment:
Q  22 gtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaa 121  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||| |||| |||||||||||| |||| |||| ||||    
T  7968479 gtgcacggaacgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaa 7968578  T
Q  122 ccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctc 221  Q
    |||  |||| |||||||||||||  ||| ||| |||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||| ||||||    
T  7968579 ccgccagagtcaggtgtgccattacaacagctctgcagccctccacctctatatataggggactcaatgcagtccccaaggcagaatctatcttttcctc 7968678  T
Q  222 taaaccctcactctctc 238  Q
    | |||||||||||||||    
T  7968679 ttaaccctcactctctc 7968695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 12738731 - 12738495
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||||| | |||||| |||| ||||||||||  ||||| ||||||| |||||||||||||||| |||||| ||||||||||||| | |||| ||||    
T  12738731 cacccctttcccacaaggggggtgtacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagaggtt 12738632  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||| ||| | |||||| |||||||||  ||||||| |||| ||||||||||||||||||||||||||||  ||||||||  |    
T  12738631 acacttcccacgatttcgtaatcgtcatagccagatgtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtccccta 12738532  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||||| ||||||||    
T  12738531 ggtagaatctatctcttcctctaaacccccactctct 12738495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 15119684 - 15119921
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||| ||||||| ||| ||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||| | |||||||||    
T  15119684 caccccttccacacaaggggggtgcacagagtgaaagagacaggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcggtt 15119783  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    | ||||||||||||||||||||||  ||||||||||||||||||  |  |||| |||| | |||||||||||||||||||||||||||  || |||| ||    
T  15119784 atacttcccacgattttgtaaccgccagagccaggtgtgccattacactggctctgcaactctccacctctataaataggggactcaa--caatccccaa 15119881  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    |||||||||||||||||| ||||||||| |||||||||||    
T  15119882 ggtagaatctatctcttcatctaaacccccactctctctg 15119921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 23574629 - 23574394
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||||| | |||||||| ||||||||||||| |||||||||||||| |||||||||||||||| | || | || |||||||||| | || | ||||    
T  23574629 cacccctttcccacaagggcg-tgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctacatgttctcgcaataaactctctggtggtt 23574531  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||| |||||| || ||||| |  ||||||| ||||||||||  ||||||| |||||||||| ||||||||||||||||||||||| |||||||  ||    
T  23574530 acactttccacgacttcgtaacagccagagccaagtgtgccattacaacggctctgcagccctctacctctataaataggggactcaaagcagtccacaa 23574431  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  23574430 ggtagaatctatctcttcctctaaaccctcactctct 23574394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 29094980 - 29095214
Alignment:
Q  1 cacccctttcacgcaagggcgg-tgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggt 99  Q
    |||||||| ||||| |||| || |||||||| |||||||||| |||||||| ||||| |||||||||| | |||| ||||||||||||| | |  |||||    
T  29094980 caccccttccacgcgagggggggtgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggt 29095079  T
Q  100 tacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtcccta 199  Q
    ||||||||||||||||| |||||||| ||||  ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  29095080 tacacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtcccca 29095179  T
Q  200 aggtagaatctatctcttcctct-aaaccctcactct 235  Q
    ||||||||||  | ||||||||| |||||||||||||    
T  29095180 aggtagaatc--tttcttcctctcaaaccctcactct 29095214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18729157 - 18728923
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||| ||||| |||||||  ||||||||||||||| ||||| |||||||| || ||||||||||||| |||||| | ||||||||||| |  | ||||||    
T  18729157 caccgctttcccgcaaggagggtgcacggagcgaacgagaccggttcaaaggagccacaacgtctctctgcacgtttccgcaataaactctatggcggtt 18729058  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||||||| |||  |||||||||||| |||||  || | || |||||||||||||||||||||||||||||||||   ||||||  ||    
T  18729057 acacttcccacgattttgtacccgccagagccaggtgttccattacaatgtctctgcagccctccacctctataaataggggactcataacagtcctcaa 18728958  T
Q  201 ggtagaatctatctcttcctctaaaccctcactct 235  Q
    |||||||||||||||||||||||| ||||||||||    
T  18728957 ggtagaatctatctcttcctctaatccctcactct 18728923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 14910822 - 14910605
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||   |||| |||||||| |||||||||||||||| |||||| ||||||||||||| |  | ||||||||||||||||| |||| |||    
T  14910822 ggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacacttcccacaatttcgta 14910723  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtag-aatctatctcttcc 219  Q
    || |  ||||| | ||||||||||  |||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| |||||| |||||||    
T  14910722 actgccagagcgatgtgtgccattacaacggctttgcagccctccacctctatatataggggactcactgcagtccccaaggtagaaatctagctcttcc 14910623  T
Q  220 tctaaaccctcactctct 237  Q
    ||||||||||||||||||    
T  14910622 tctaaaccctcactctct 14910605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 2 - 230
Target Start/End: Complemental strand, 18736235 - 18736007
Alignment:
Q  2 acccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtta 101  Q
    ||||||||| |||||| | ||||||||||||||  |||| ||||||||| || ||||||||||||| | |||| ||||||||||||| | || ||| |||    
T  18736235 acccctttcccgcaagaggggtgcacggagcgagcgagattggttcaaacgagccacaacgtctctctacacgttcccgcaataaactctctggcgatta 18736136  T
Q  102 cacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaag 201  Q
     ||||||||| |||| |||||||  ||||||||||||||||||  |||||||  ||||||||||||||||||||||||||||||||  |||||||| |||    
T  18736135 gacttcccacaatttcgtaaccgccagagccaggtgtgccattacaacggctcagcagccctccacctctataaataggggactcatagcagtccccaag 18736036  T
Q  202 gtagaatctatctcttcctctaaaccctc 230  Q
     |||||| |||||||||||||||||||||    
T  18736035 ctagaatttatctcttcctctaaaccctc 18736007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 29482805 - 29482591
Alignment:
Q  23 tgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaac 122  Q
    ||||||||||||  ||||| |||||||| || ||||||||||||| |||| | ||||||||||||| | ||  | |||| |||||||||||||| |||||    
T  29482805 tgcacggagcgagcgagaccggttcaaacgagccacaacgtctctctgcatgttcccgcaataaactctctcacagttatacttcccacgatttcgtaac 29482706  T
Q  123 cgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct 222  Q
    || |||| ||||||||||||||  |||| || | |||||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||||||||    
T  29482705 cgctagaaccaggtgtgccattacaacgactctacagccctccacctctataaataggggactcatagtagtccccaaggtagaatctatctcttcctct 29482606  T
Q  223 aaaccctcactctct 237  Q
    |||||| ||||||||    
T  29482605 aaacccccactctct 29482591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 24438524 - 24438760
Alignment:
Q  1 cacccctttcacgcaagggcg-gtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggt 99  Q
    |||||||| |||||||||| | |||||||| | |||||||| ||||||||| |||||||| ||||||| |||||| ||| ||||| ||| |  | |||||    
T  24438524 caccccttccacgcaagggggtgtgcacggggagaaagagattggttcaaacgaaccacatcgtctctttgcacgttcctgcaatcaactctatggcggt 24438623  T
Q  100 tacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtcccta 199  Q
    ||||||||||||||||| |||||||  ||||||||||||| ||||  |||| || ||||  |||| ||||||||||||||||||||||  |||||||| |    
T  24438624 tacacttcccacgatttcgtaaccgcaagagccaggtgtgtcattacaacgactctgcaatcctctacctctataaataggggactcacagcagtccc-a 24438722  T
Q  200 aggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  24438723 aggtataatctatctcttcctctaaaccctcactctct 24438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 8306276 - 8306061
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||| |||||||||||||||||||||| ||  |||||||||||| || | | ||||||||||||| | || |||||||||||| ||| |||||  ||    
T  8306276 ggtgcacagagcgaaagagactggttcaaacgagtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacactttccatgatttcata 8306177  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    || | ||||| |||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||  |||||||| ||||||||    ||||||||||    
T  8306176 actgctagagtcaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcacagcagtccccaaggtaga----atctcttcct 8306081  T
Q  221 ctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||    
T  8306080 ctaaaccctcactctctctg 8306061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 18258578 - 18258794
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||| |||||  ||||| |||||||| ||||||||||||||||  ||||  ||||||||||||| |  |||| |||||||||||||| |||| |||    
T  18258578 ggtgcacgaagcgagtgagaccggttcaaaggaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaatttcgta 18258677  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||| | |||||||||||||||| |  ||||||| | |||||||| ||||||||||||||||||||||   ||||| | |||||||||||||| | || ||    
T  18258678 accatcagagccaggtgtgccactacaacggctctacagccctctacctctataaataggggactcacaacagtctccaaggtagaatctatatttttct 18258777  T
Q  221 ctaaaccctcactctct 237  Q
    |||||||||||||||||    
T  18258778 ctaaaccctcactctct 18258794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 38 - 237
Target Start/End: Original strand, 19860052 - 19860251
Alignment:
Q  38 agactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtg 137  Q
    ||||||||||||| ||||| ||||||||||   || | |||| |||||| | | || | |||||||||||||||||||| |||||||  |||||||||||    
T  19860052 agactggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtg 19860151  T
Q  138 tgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    | |||||  |||||||  ||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||| |||||||||||| |||||||||    
T  19860152 tcccattacaacggctccgcagccctccacctctataaataggggactcacagcagtccccaaggtagaatttatctattcctctaaaccgtcactctct 19860251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 18014422 - 18014656
Alignment:
Q  2 acccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtta 101  Q
    ||||||| | ||| |||| ||||||||||||||   ||||  ||||||| ||||||||| || |   || ||| ||||||||||| | | || | |||||    
T  18014422 accccttccccgcgaggggggtgcacggagcgagcaagaccagttcaaacgaaccacaatgtttgactgtacgttcccgcaataatctctctggtggtta 18014521  T
Q  102 cacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaag 201  Q
     |||||||||||||| |||||||  ||||| ||||||||||||  ||||||| ||||||||||||||||||||  |||||||||||  |||||||| |||    
T  18014522 gacttcccacgatttcgtaaccgccagagctaggtgtgccattacaacggctctgcagccctccacctctatatgtaggggactcatagcagtccccaag 18014621  T
Q  202 gtagaatctatctcttcctctaaaccctcactctc 236  Q
    |||||||| |||||||||||| |||||||||||||    
T  18014622 gtagaatcaatctcttcctcttaaccctcactctc 18014656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 18043430 - 18043337
Alignment:
Q  147 aacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  18043430 aacggctttgcagccctccacctctataaataggggactaaatgcagtccccaaggtagaatttatctcttcctctaaaccctcactctctctg 18043337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 235
Target Start/End: Original strand, 15318993 - 15319175
Alignment:
Q  52 gaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacgg 151  Q
    |||||||||| ||||| |||||| ||| ||||||| | | ||||||||||||||||||||||||| |||||||  ||| | |||||| ||||   ||||     
T  15318993 gaaccacaacttctctttgcacgttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcacaacga 15319092  T
Q  152 ctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactct 235  Q
    || |||||||||||||||||||| |||||| ||||   |||||||| ||||||||||| | ||||| |||||||||||||||||    
T  15319093 ctctgcagccctccacctctatatatagggaactcttagcagtccccaaggtagaatcga-ctctttctctaaaccctcactct 15319175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 17756981 - 17757133
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||||| |||| |||||||||| ||||| ||| ||||||||| ||||| |||||||||| | |||| |||| |||||||| | |  ||||||    
T  17756981 caccccttccacgcgaggggggtgcacggaacgaaaaagattggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcacaggcggtt 17757080  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggct 153  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||  |||||||    
T  17757081 acacttcccacgattttgtaaccgtcagagtaaggtgtgccattacaacggct 17757133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 15349643 - 15349800
Alignment:
Q  52 gaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacgg 151  Q
    |||||||||| ||||| |||||| |||| |||||| | | || |||||||||||||||||||||| |||||||  ||| |||||||||| ||   |||||    
T  15349643 gaaccacaacatctctttgcacgttcccacaataatctctctcgcggttacacttcccacgatttcgtaaccgccagacccaggtgtgctatcacaacgg 15349742  T
Q  152 ctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatc 209  Q
    || |||||||||||||||||||| |||||||||||   |||||||| || ||||||||    
T  15349743 ctctgcagccctccacctctatatataggggactcttagcagtccccaacgtagaatc 15349800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 21508602 - 21508716
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||  |||||||| ||||||| |||||| ||| ||||||||| |  | ||||||    
T  21508602 caccccttccatgcaaggggggtgcacggagcgaaagagactggttcaatcgaaccacagcgtctctctgcacgttcctgcaataaactctatggcggtt 21508701  T
Q  101 acacttcccacgatt 115  Q
    |||||||||||||||    
T  21508702 acacttcccacgatt 21508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 208
Target Start/End: Original strand, 15369639 - 15369795
Alignment:
Q  52 gaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacgg 151  Q
    |||||||||| ||||| |||||| ||||||||||| |   || |||||||||||||| || |||| |||||||  ||| | |||||| ||||  |||||     
T  15369639 gaaccacaacttctctttgcacgttcccgcaataatctgtctggcggttacacttcctacaatttcgtaaccgccagacctaggtgtaccatcataacga 15369738  T
Q  152 ctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaat 208  Q
    || | |||||||||||||||||| |||| ||||||   |||||||| ||||||||||    
T  15369739 ctctacagccctccacctctatatatagaggactcttagcagtccccaaggtagaat 15369795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 23524246 - 23524128
Alignment:
Q  55 ccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctt 154  Q
    ||||||| ||||| |||||| ||||||||||||| |  |   |||||||||| |||||||||  ||||||  ||||||||||||||||||  || ||||     
T  23524246 ccacaacttctctctgcacgttcccgcaataaactctttgatggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggctc 23524147  T
Q  155 tgcagccctccacctctat 173  Q
    ||||||||||||| |||||    
T  23524146 tgcagccctccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 3876512 - 3876330
Alignment:
Q  43 ggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgcca 142  Q
    ||||||||||| | ||||||||||| ||||   ||||||||||| | | ||  || |||||||||| ||||||| |||||||  |||   ||||||| |     
T  3876512 ggttcaaatgagctacaacgtctctttgcatattcccgcaataatctctctgacgattacacttcctacgatttcgtaaccgccagacttaggtgtgtct 3876413  T
Q  143 ttgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |   ||||||| |||||||||||||||||||| ||||||            |||| |||||||||| ||||||| ||||| ||||||||||||||    
T  3876412 tcacaacggctctgcagccctccacctctatatataggg------------tccccaaggtagaatatatctctccctcttaaccctcactctct 3876330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 14 - 240
Target Start/End: Original strand, 47392 - 47618
Alignment:
Q  14 caagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacga 113  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| | || ||||||||||||||||| |    
T  47392 caaggggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaa 47491  T
Q  114 ttttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatc 213  Q
    |||||||||||  ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  47492 ttttgtaaccgccagagccaagtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcagtccccaaggtagaatctatc 47591  T
Q  214 tcttcctctaaaccctcactctctctg 240  Q
    |||||||||||||||||||||||||||    
T  47592 tcttcctctaaaccctcactctctctg 47618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 2085706 - 2085945
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| || ||||||| ||| |||||||||||||||||| ||||||| ||||||||| |||||| |||| | |||||||||||||| ||| ||  ||    
T  2085706 caccccttccaagcaaggggggtacacggagcgaaagagactagttcaaacgaaccacaatgtctctctgcatgttcccgcaataaacgacctggcaatt 2085805  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||||||  ||||||||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||||| ||    
T  2085806 acacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggttctgcagccctccacctctataaataggggactcaatgcagtccccaa 2085905  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2085906 ggtagaatctatctcttcctctaaaccctcactctctctg 2085945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18040445 - 18040683
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||  |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| |  | ||||||    
T  18040445 caccccttccacacaaggtgggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggtt 18040544  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||||||| ||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||||| |||||||| ||    
T  18040545 acacttcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcagctctccacctctataaataggggactcaa-gcagtccccaa 18040643  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  18040644 ggtagaatcaatctcttcctctaaaccttcactctctctg 18040683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 32008997 - 32009213
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| |||||| ||||||||||| | | |||||| |||||||||||||||||| |||    
T  32008997 ggtgcacggagcgaaagagactggttcaaacgaaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacacttcccacgatttcgta 32009096  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  |||| |||||||||||||  ||||||| | |||||||||||||||||||||||||||||||| | | |||| |||||| |||||||||||||||    
T  32009097 accgccagagtcaggtgtgccattacaacggctctacagccctccacctctataaataggggactcaaagtactccccaaggtaaaatctatctcttcct 32009196  T
Q  221 ctaaaccctcactctct 237  Q
    |||||||||||||||||    
T  32009197 ctaaaccctcactctct 32009213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 18573984 - 18574220
Alignment:
Q  4 ccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttaca 103  Q
    ||||| ||| |||||| |||||| ||||| ||||||| ||||||||| |||||||||||||||| |||||| |||| |||||||| | || |||||||||    
T  18573984 cccttccacacaaggggggtgcatggagcaaaagagagtggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctggcggttaca 18574083  T
Q  104 cttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccc---taa 200  Q
    ||||||||||||| |||||||  ||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| ||| ||||    ||    
T  18574084 cttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaaagcattccccaagaa 18574183  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18574184 ggtagaatctatctcttcctctaaactctcactctct 18574220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 7999884 - 7999650
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||   ||||||||||||| |||||||||||| || |||||||||||||||| |||| | ||||||||||||| | || ||||||    
T  7999884 caccccttccacacaaggcgagtgcacggagcgacagagactggttccaacgaaccacaacgtctctctgcatgttcccgcaataaactctctggcggtt 7999785  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||||||  ||||||||||||| ||||  ||||||  ||||| |||||||||||||||| ||| ||||||  |||||||| ||    
T  7999784 acacttcccacgatttcgtaaccgccagagccaggtgtgtcattacaacggc--tgcagtcctccacctctataaacaggagactcacggcagtccccaa 7999687  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  7999686 ggtagaatctatctcttcctctaaaccctcactctct 7999650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 7454650 - 7454866
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||  ||||| |||||| | || |||||||||||||||||||| |||| |||||||| |  |  ||||||||||||||||||||| |||    
T  7454650 ggtgcacggagcgagcgagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactctatgacggttacacttcccacgatttcgta 7454749  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  ||||||||||||||||||  ||||||| ||||||| |||||||||||||||||||||||||  |||||||| ||| ||||||||||||||||||    
T  7454750 accgccagagccaggtgtgccattacaacggctctgcagccttccacctctataaataggggactcatagcagtccccaagttagaatctatctcttcct 7454849  T
Q  221 ctaaaccctcactctct 237  Q
     ||||||||||||||||    
T  7454850 gtaaaccctcactctct 7454866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 52 - 240
Target Start/End: Original strand, 10532804 - 10532992
Alignment:
Q  52 gaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacgg 151  Q
    |||||||||||||||| | |||| ||| ||||||||| |||| |||||||||||| ||||||||| |||||||  |||| |||||||||||||  |||||    
T  10532804 gaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaacgg 10532903  T
Q  152 ctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    || ||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||||| |||||||||||| || |||||    
T  10532904 ctctgcagccctccacctctataaataggggacttaatggagtccccaaggtagaatttatctcttcatctaaaccctcattccctctg 10532992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 24034001 - 24033762
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||||| | |||||| |||||||||||  || |||||||||||||| ||||||||| |||||| |||||| ||||||||||||| | || ||||||    
T  24034001 cacccctttcccacaaggggggtgcacggagaaaacgagactggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggtt 24033902  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacct---ctataaataggggactcaatgcagtccc 197  Q
    |||||| ||||||||| |||||||  | || || ||||||||||  ||||||| |||| ||||||||||    ||||| |||||||||||  ||||||||    
T  24033901 acactttccacgatttcgtaaccgccaaagtcaagtgtgccattacaacggctctgcaaccctccacctatattataactaggggactcatagcagtccc 24033802  T
Q  198 taaggtagaatctatctcttcctctaaaccctcactctct 237  Q
     || |||||||||||||||||||||||||| |||||||||    
T  24033801 caatgtagaatctatctcttcctctaaaccttcactctct 24033762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 41280794 - 41281008
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||   |||| |||||||| || |||||||| |||| |||||| ||||||||||||| | || ||||||||||||||||||||||||||    
T  41280794 ggtgcacggagcgagcaagaccggttcaaacgagccacaacg-ctctctgcacgttcccgcaataaactctctggcggttacacttcccacgattttgta 41280892  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    |||   |||| |||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||   ||||||| ||||||||||||| | ||||||    
T  41280893 acccccagagtcaggtgtgccattacaacggctctgcagtcctccacctctataaataggggactcataacagtccccaaggtagaatctaac-cttcct 41280991  T
Q  221 ctaaaccctcactctct 237  Q
    | ||||| |||||||||    
T  41280992 cgaaaccttcactctct 41281008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 25820937 - 25820717
Alignment:
Q  16 agggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgatt 115  Q
    |||| |||||||| | ||||||  || | |||||| ||||| |||||||||| | |||| ||| ||||||||| | |  |||||||||||||||||||||    
T  25820937 aggggggtgcacgaaacgaaaggaaccgattcaaacgaaccccaacgtctctttccacgttccagcaataaactcacaggcggttacacttcccacgatt 25820838  T
Q  116 ttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctc 215  Q
    | |||||||| ||||  ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||  | ||    
T  25820837 tcgtaaccgtcagagtaaggtgtgccattacaacggctttgcagccctccacctctaaaaataggggactcaatgcagtccccatggtagaatc--tttc 25820740  T
Q  216 ttcctct-aaaccctcactctct 237  Q
    ||||||| ||||||| |||||||    
T  25820739 ttcctctcaaacccttactctct 25820717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 24060794 - 24060562
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| | ||| |||| |||||||||||| |   |||| ||||| || |||||||||| ||||| |||| | ||| ||||||| | | || || |||    
T  24060794 caccccttccccgcgagggaggtgcacggagcaagcaagaccggttctaacgaaccacaacatctctctgcatgttcctgcaataatctctctggcagtt 24060695  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||| |||||||||||||||  |||||| ||||||||||   ||||||| |||||||||||||||||||| ||| |||||||   |||||| | ||    
T  24060694 acacttcctacgattttgtaaccgccagagcctggtgtgccatcacaacggctctgcagccctccacctctatatataagggactcttagcagtctccaa 24060595  T
Q  201 ggtagaatctatctcttcctctaaaccctcact 233  Q
    ||||||||||||| |||||||||||||||||||    
T  24060594 ggtagaatctatcgcttcctctaaaccctcact 24060562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 43 - 233
Target Start/End: Complemental strand, 11709562 - 11709372
Alignment:
Q  43 ggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgcca 142  Q
    |||||||| |||||||||||||||| |||||| |||| |||||| | | || |||||||||||||||||||||| ||||  |  |||||| |||||||||    
T  11709562 ggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctggcggttacacttcccacgatttcgtaaatgccagagcctggtgtgcca 11709463  T
Q  143 ttgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcact 233  Q
    ||  ||||||| |||| ||||||||||||||| |||||||||||   |||||||  ||||||||||| |||||| ||||| ||||||||||    
T  11709462 ttacaacggctctgcaaccctccacctctatatataggggactctcagcagtccgaaaggtagaatcgatctctccctcttaaccctcact 11709372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 33273604 - 33273704
Alignment:
Q  135 gtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactc 234  Q
    ||||||||||  ||||||| |||| ||||||||||||||||||||||||||||  | |||||| ||||||||||||||||||| ||||||||||||||||    
T  33273604 gtgtgccattacaacggctctgcaaccctccacctctataaataggggactcataggagtccccaaggtagaatctatctctttctctaaaccctcactc 33273703  T
Q  235 t 235  Q
    |    
T  33273704 t 33273704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 22609476 - 22609692
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||  |||| ||||||||| ||||||| |  ||||| |||| | || |||||||||| | ||  ||||||||| || |||||||| |||    
T  22609476 ggtgcacggagcgagcgagattggttcaaacgaaccacgatatctctctgcatgttcacgcaataaactctctgtcggttacacatctcacgatttcgta 22609575  T
Q  121 accgttagagccaggtgtg--ccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttc 218  Q
    ||||  |||||||||||||  ||||   |||| || |||| ||||||||||||||| ||  |||||||    || |||| ||| ||||||| ||||||||    
T  22609576 accgccagagccaggtgtgtaccatcacaacgactctgcaaccctccacctctatatat--gggactcttaacaatcccaaagatagaatcaatctcttc 22609673  T
Q  219 ctctaaaccctcactctct 237  Q
    ||| |||||||||||||||    
T  22609674 ctcaaaaccctcactctct 22609692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 1788732 - 1788651
Alignment:
Q  155 tgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct-aaaccctcactctct 237  Q
    |||||||||||||||||||||||||| |||||||||||||| | |||||||||||  | ||||||||| |||||||||||||||    
T  1788732 tgcagccctccacctctataaataggagactcaatgcagtcaccaaggtagaatc--tttcttcctctcaaaccctcactctct 1788651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 17775756 - 17775705
Alignment:
Q  189 tgcagtccctaaggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17775756 tgcagtccccaaggtagaatctatctcttcctctaaaccctcactctctctg 17775705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 10532704 - 10532796
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccct 93  Q
    |||||||| || ||||||| ||| |||| ||||||||||| ||||||||| |||||||||||||||| | |||| ||| ||||||||| ||||    
T  10532704 caccccttacatgcaaggggggtacacgaagcgaaagagattggttcaaacgaaccacaacgtctctctccacgttcctgcaataaacaccct 10532796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17775855 - 17775782
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacga 75  Q
    |||||||| ||| |||||| |||| ||||||||||||||||||||||||  |||||||||||||||| |||||||    
T  17775855 caccccttccacacaaggg-ggtgtacggagcgaaagagactggttcaatcgaaccacaacgtctctctgcacga 17775782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 33273497 - 33273598
Alignment:
Q  12 cgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccac 111  Q
    |||||||| |||||  |||||||   |||| |||||||| || ||||||||||||| |||||| |||||||||||   |  | |||||||||||||||||    
T  33273497 cgcaaggggggtgcgaggagcgagcaagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataagttctatggcggttacacttcccac 33273596  T
Q  112 ga 113  Q
    ||    
T  33273597 ga 33273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 152; Significance: 1e-80; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 23755782 - 23756021
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| || ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||| |||||| ||||||||||||| |  | ||||||    
T  23755782 caccccttccaagcaaggggggtgcacggagcgaaagtgactggttcaaaagaaccacaacgtctctctgcacgttcccgcaataaactctatggcggtt 23755881  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| ||||||| |||||||||||||||||||  ||||||| | ||||| |||||||||||||||||||||||||   ||||||| ||    
T  23755882 acacttcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccttccacctctataaataggggactcacaacagtccccaa 23755981  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23755982 ggtagaatctatctcttcctctaaaccctcactctctctg 23756021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3770496 - 3770257
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||| |||||| ||||||| ||||||||||||||| ||||| |||||||||| |||||| | ||||||||||| | |||||||||    
T  3770496 caccccttccactcaaggggggtgcatggagcgagagagactggttcaaacgaacctcaacgtctctctgcacgtttccgcaataaactctctagcggtt 3770397  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||| |||||||||||||||||  ||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||| |||   ||||||| ||    
T  3770396 acactttccacgattttgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggattcacaacagtccccaa 3770297  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3770296 ggtagaatctatctcttcctttaaaccctcactctctctg 3770257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 25133917 - 25134136
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||| |||||| ||||||||||||| | || |||||||||||| ||||||||| |||    
T  25133917 ggtgcacggagcaagcgagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacacttaccacgatttcgta 25134016  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  |||||||||||||||| |  ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  25134017 accgccagagccaggtgtgccactacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctatctcttcct 25134116  T
Q  221 ctaaaccctcactctctctg 240  Q
    ||||||| ||| ||||||||    
T  25134117 ctaaaccatcattctctctg 25134136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 240
Target Start/End: Original strand, 41266163 - 41266399
Alignment:
Q  3 cccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttac 102  Q
    ||||||||| |||| || ||||||||||||||| | |||||||||||| |||||||||||||||| |||||| ||||||||||||| | |  ||||||||    
T  41266163 cccctttcaggcaatgg-ggtgcacggagcgaa-gtgactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctcgggcggttac 41266260  T
Q  103 acttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaagg 202  Q
    ||||| |||||| | |||||||  ||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||    
T  41266261 acttctcacgatatcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacagcagtccccaagg 41266360  T
Q  203 tagaatctatctcttcctct-aaaccctcactctctctg 240  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  41266361 tagaatctatctcttcctctaaaaccctcactctctctg 41266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 42534088 - 42534322
Alignment:
Q  3 cccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttac 102  Q
    |||||||| | |||||| |||||||| |||||  |||||  ||||||| || ||||||||||||| |||||| ||||||||||||| | || ||||||||    
T  42534088 cccctttcccacaaggggggtgcacgtagcgagcgagacctgttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttac 42534187  T
Q  103 acttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaagg 202  Q
    |||||||||||||| |||||||  |||||||| |||||||||  ||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||    
T  42534188 acttcccacgatttcgtaaccgccagagccagatgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccccaagg 42534287  T
Q  203 tagaatctatctcttcctctaaaccctcactctct 237  Q
    ||||||||| ||| ||| |||||||||||||||||    
T  42534288 tagaatctaactcctccgctaaaccctcactctct 42534322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 23930013 - 23929797
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||  ||||| |||||||||||||||||| |||||| |||||| |||| |||||||| | |  |||||||||||||||||||||  |||    
T  23930013 ggtgcacggagcgagcgagaccggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgta 23929914  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  ||||||||||||||||||  ||||||| ||||||||||||||||| || |||||||||||| ||||||||| |||||| |||||| ||||||||    
T  23929913 accgccagagccaggtgtgccattacaacggctctgcagccctccacctctttatataggggactcactgcagtccccaaggtaaaatctaactcttcct 23929814  T
Q  221 ctaaaccctcactctct 237  Q
    |||||||||||||||||    
T  23929813 ctaaaccctcactctct 23929797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 26154949 - 26155131
Alignment:
Q  4 ccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttaca 103  Q
    ||||| ||| |||||| |||||||||||||||||||| | ||||||| |||||||||| ||||| || ||| ||||||||||||||| || |||||||||    
T  26154949 cccttccacacaaggggggtgcacggagcgaaagagattagttcaaacgaaccacaacatctctttgtacgttcccgcaataaacgctctggcggttaca 26155048  T
Q  104 cttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactc 186  Q
    ||||||||||||| ||||||   | |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  26155049 cttcccacgatttcgtaaccaccatagccaggtgtgccattataacggctatgcagccctccacctctataaataggggactc 26155131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 22 - 237
Target Start/End: Complemental strand, 3105419 - 3105204
Alignment:
Q  22 gtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaa 121  Q
    |||||| ||||||  ||||| |||||||| || ||||||||||||| |||||| ||||||||||||| | || ||||||||||||||||||||||  |||    
T  3105419 gtgcacagagcgagcgagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcataa 3105320  T
Q  122 ccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctc 221  Q
    || | ||||  ||||||| ||||  ||||||| | ||  |||||||||||||||||| ||||||||  |||||||| ||||||||||||| |||||||||    
T  3105319 ccatgagagttaggtgtgtcattacaacggctctacaatcctccacctctataaatatgggactcatagcagtccccaaggtagaatctaactcttcctc 3105220  T
Q  222 taaaccctcactctct 237  Q
    |||| |||||||||||    
T  3105219 taaaacctcactctct 3105204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 235
Target Start/End: Complemental strand, 19092937 - 19092723
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||||||  ||||| ||||||| |||||||||||||||| |||||| ||||||||||| | | || ||||||||||||||||| | || | |    
T  19092937 ggtgcacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataatctctctggcggttacacttcccacaagttcgaa 19092838  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  |||| | |||||| ||||  ||||||| |||||||| ||||||||||| ||||||||||||  |||||||| ||||||| || |||||||||||    
T  19092837 accgcgagagtctggtgtgtcattacaacggctctgcagccccccacctctatatataggggactcatagcagtccccaaggtaggatttatctcttcct 19092738  T
Q  221 ctaaaccctcactct 235  Q
    |||||||||| ||||    
T  19092737 ctaaaccctctctct 19092723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 32 - 237
Target Start/End: Complemental strand, 27347374 - 27347171
Alignment:
Q  32 cgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagc 131  Q
    ||||||||||||||||||| ||||| |||||||||| | |||| ||||||||||||| |    || ||||||||||||| ||||| |||||||| || |     
T  27347374 cgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcataggcagttacacttcccatgatttcgtaaccgtcagtgt 27347275  T
Q  132 caggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctca 231  Q
     ||||||||||||  |||||||||| |||||||||| |||||| |||||||| ||||||||||||| |||||||||||  |||||||||| ||||| |||    
T  27347274 taggtgtgccattacaacggctttgtagccctccacgtctatacataggggattcaatgcagtccccaaggtagaatc--tctcttcctcaaaaccatca 27347177  T
Q  232 ctctct 237  Q
    ||||||    
T  27347176 ctctct 27347171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 237
Target Start/End: Complemental strand, 29568507 - 29568315
Alignment:
Q  44 gttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccat 143  Q
    ||||||| || ||||||||||||| | |||| ||| ||||||||| | ||||||||||||||||||||||||| |||||||  |||||||||||| ||||    
T  29568507 gttcaaacgagccacaacgtctctctacacgttcc-gcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  144 tgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |  ||||||| || |||||||||||||||||||| |||||||||  |||  | | ||| |||||||||| ||||||||||||||||||||||||    
T  29568408 tacaacggctctgtagccctccacctctataaattggggactcatagcaaccgccaagttagaatctatgtcttcctctaaaccctcactctct 29568315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 158 - 240
Target Start/End: Original strand, 26159154 - 26159236
Alignment:
Q  158 agccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  26159154 agccctccacctctataaataggggactcaaagcagttcccaaggtagaatctatctcttcctctaaaccctcactctctctg 26159236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 8e-76; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 19967402 - 19967621
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| | || ||||||||||  |||||||||| |||    
T  19967402 ggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacaccacccacgatttcgta 19967501  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  ||||||||||||| ||||  ||||| | |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  19967502 accgccagagccaggtgtgtcattacaacggttatgcaaccctccacctctataaataggggactcaaagcagtccctaaggtagaatccatctcttcct 19967601  T
Q  221 ctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||    
T  19967602 ctaaaccctcactctctctg 19967621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 19442075 - 19442313
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||| ||||  |||||||||||||||||||||||  |||||||||||||||| | |||| |||| |||||||| | || ||||||    
T  19442075 caccccttccacacaaggg-ggtgtgcggagcgaaagagactggttcaatcgaaccacaacgtctctctacacgttcccacaataaactctctggcggtt 19442173  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    | ||||||| |||||| |||||||  |||| ||| |||| ||||  |||||||||||||| ||||||||||||||||||||||||||  |||||||| ||    
T  19442174 atacttcccccgatttcgtaaccgccagagtcagatgtgtcattacaacggctttgcagcactccacctctataaataggggactcacagcagtccccaa 19442273  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19442274 ggtagaatctatctcttcctctaaaccctcactctctctg 19442313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 9859207 - 9858967
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    ||||||||||  ||||||| ||||||| ||||||  |||||| ||||||| |||||||||||||||| |||||| ||||||||||||| |  | ||||||    
T  9859207 cacccctttcctgcaaggggggtgcacagagcgagtgagactcgttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctttggcggtt 9859108  T
Q  101 acacttcccacgattttgtaaccgttagagcca----ggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtcc 196  Q
    |||||||||||||||| |||||||| |||||||     |||||| |    ||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  9859107 acacttcccacgatttcgtaaccgtcagagccaagtgtgtgtgcaaccacaacggctctgcagccctccacctctataaataggggactcatagcagtcc 9859008  T
Q  197 ctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    | |||||||||| ||||||||| |||||||||||| |||||    
T  9859007 ccaaggtagaatatatctcttcatctaaaccctcagtctct 9858967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 8990745 - 8990961
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||| ||  ||||| |||||||   | ||||||||||||| |||||| || | |||||||| | ||  | ||||||||||||||||||| |||    
T  8990745 ggtgcacggagtgagcgagaccggttcaagcaagccacaacgtctctctgcacgttctcacaataaactctctgacagttacacttcccacgatttcgta 8990844  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    |||| |||||||||||||||||||  ||||||| | ||||||||||||||| ||||||||||||||| ||||||||| | ||||||||||| ||||||||    
T  8990845 accgctagagccaggtgtgccattacaacggctctacagccctccacctctgtaaataggggactcactgcagtccccacggtagaatctaactcttcct 8990944  T
Q  221 ctaaaccctcactctct 237  Q
    |||||||||||||||||    
T  8990945 ctaaaccctcactctct 8990961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 8995422 - 8995630
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||  ||||| |||||||   | |||||||||||||  ||||| ||||||||||||| |  | |||||||||||||||||||||| |||    
T  8995422 ggtgcacggagcgagcgagaccggttcaagcaagccacaacgtctctcagcacgttcccgcaataaactctatggcggttacacttcccacgatttcgta 8995521  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    |||| |||||| ||||||| || |  ||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||||||||    
T  8995522 accgctagagctaggtgtgtcaatc-aacggctctgcagccctccacctctataaataggggactcactgcattccccaaggtagaatctaactcttcct 8995620  T
Q  221 ctaaaccctc 230  Q
    ||||||||||    
T  8995621 ctaaaccctc 8995630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 24973854 - 24974085
Alignment:
Q  4 ccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttaca 103  Q
    ||||| || ||||||| ||||||| || |||||||||| |||||||| ||||| |||||||||| |  ||  |||| |||||||| | |  |||||||||    
T  24973854 cccttccaagcaaggg-ggtgcacagaacgaaagagaccggttcaaacgaacctcaacgtctctttcaacattcccacaataaactcacaggcggttaca 24973952  T
Q  104 cttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggt 203  Q
    ||||||||||||| |||||||| ||||  ||||||||||||  ||||||| |||||||||| | |||||||||||||||||||||||||||| | |||||    
T  24973953 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctctaactctataaataggggactcaatgcagtcaccaaggt 24974052  T
Q  204 agaatctatctcttcctct-aaaccctcactctct 237  Q
    ||||||  ||||||||||| |||||||||||||||    
T  24974053 agaatc--tctcttcctctaaaaccctcactctct 24974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 21817722 - 21817937
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||| |||||||||  |||||||| ||||| || ||||||| | |||| ||||||||||||| | |  || ||||||||||||||||||| |||    
T  21817722 ggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttacacttcccacgatttcgta 21817821  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||| ||||  ||||||||||||  ||||||| ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||  | |||||||    
T  21817822 accgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaaggtagaatc--tttcttcct 21817919  T
Q  221 ct-aaaccctcactctct 237  Q
    || |||||||||||||||    
T  21817920 ctaaaaccctcactctct 21817937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 38622038 - 38621812
Alignment:
Q  2 acccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtta 101  Q
    ||||||| | ||| |||| ||| ||||||||||  ||||  |||| ||| |||||||||||||||| |||||| ||||||||||||     | || ||||    
T  38622038 accccttccccgcgaggggggtccacggagcgagcgagatcggttaaaacgaaccacaacgtctctctgcacgttcccgcaataaattgtttggcagtta 38621939  T
Q  102 cacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaag 201  Q
    ||||| ||||||||| ||||||   |||||||  |||||||||  ||||||| |||||||||||||||||||| ||| |||||||| ||||||||| |||    
T  38621938 cactttccacgatttcgtaaccaccagagccaaatgtgccattacaacggctctgcagccctccacctctatatataagggactcactgcagtccccaag 38621839  T
Q  202 gtagaatctatctcttcctctaaaccc 228  Q
    |||||||||  ||||||||||||||||    
T  38621838 gtagaatctcactcttcctctaaaccc 38621812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 22186045 - 22186185
Alignment:
Q  96 cggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtc 195  Q
    ||||||||||||||||||||||||||||||  |||  ||||||||||||  ||||||| ||||||| ||||||||||||||||||||||| || ||||||    
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaataggggacttaaagcagtc 22186144  T
Q  196 cctaaggtagaatctatctcttcctct-aaaccctcactctct 237  Q
    || |||||||||||  | ||||||||| |||||||||||||||    
T  22186145 cccaaggtagaatc--tttcttcctctcaaaccctcactctct 22186185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 21815520 - 21815607
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaac 88  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||| ||||| |||||||||| | |||| |||||||||||||    
T  21815520 caccccttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaac 21815607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 21815619 - 21815722
Alignment:
Q  133 aggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct-aaaccctca 231  Q
    ||||||||||||  ||| ||| |||||||||||||||||||||||| |||||||||||||||| | |||||||||||  | ||||||||| ||||||| |    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatc--tttcttcctctaaaaccctta 21815716  T
Q  232 ctctct 237  Q
    ||||||    
T  21815717 ctctct 21815722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 49472419 - 49472352
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaac 88  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||| | |||| |||||||||||||    
T  49472419 ggtgcacggaacgaaagagaccggttcaaatgaaccccaacgtctctttccacgttcccgcaataaac 49472352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 12885514 - 12885277
Alignment:
Q  2 acccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtta 101  Q
    ||||||| | |||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||| | || |||||||    
T  12885514 accccttccccgcaaggg-ggtgcatggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggtta 12885416  T
Q  102 cacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaag 201  Q
    ||||||||||||||| |||||||  ||||||||||||||||||  || |||| ||||||||||||||| |||||||||||||||||   ||||||| |||    
T  12885415 cacttcccacgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagccctccacctttataaataggggactcacaacagtccccaag 12885316  T
Q  202 gtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  12885315 gtagaatctatctcttcctctaaaccctcaccctctctg 12885277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 3268570 - 3268331
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||||||||||| |  | ||||||    
T  3268570 caccccttccacacaaggggggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggtt 3268471  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||  |||||||  ||||||||||||| ||||  || |||| |||||||||||||||||||||||||||||||||  | |||| | ||    
T  3268470 acacttcccacgattacgtaaccgccagagccaggtgtgtcattacaatggctctgcagccctccacctctataaataggggactcacggaagtctccaa 3268371  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  3268370 ggtagaatctatctctccctctaaaccctcactctctctg 3268331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 3270762 - 3270543
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||| | ||||||||||||||| |||||||||||||||  | |||| ||||||||||||| | ||||||||||||||||||||||||| |||    
T  3270762 ggtgcacggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcccacgatttcgta 3270663  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    |||   ||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||| |||||||||| |||    
T  3270662 accaccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtaggatctatctctccct 3270563  T
Q  221 ctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||    
T  3270562 ctaaaccctcactctctctg 3270543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 10985697 - 10985915
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||| ||||||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||| | || |||||||||||||||||||||| |||    
T  10985697 ggtgcacagagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgta 10985796  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  ||||||||||||||||||  ||||||| ||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||||    
T  10985797 accgcgagagccaggtgtgccattacaacggctctgcagccatccacctctataaataggggactcacggcagtccc-aaggtagaatctacctcttcct 10985895  T
Q  221 ctaaaccctcactctctctg 240  Q
    | ||||||||||||||||||    
T  10985896 ccaaaccctcactctctctg 10985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 17282454 - 17282660
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||||| |||| |||||||||| |||||||||||||||| || ||||| |||||||||| | |||| ||||||||||||| | | |||||||    
T  17282454 caccccttccacgcgaggggggtgcacggaacgaaagagactggttctaacgaaccccaacgtctctttccacgttcccgcaataaacccacaagcggtt 17282553  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||||||||||||| || |||||||| ||||  ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  17282554 acacttcccacgaattcgtaaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaa 17282653  T
Q  201 ggtagaa 207  Q
    |||||||    
T  17282654 ggtagaa 17282660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 13861549 - 13861314
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||||| |||| |||||||||| ||||||| || |||||||| ||||| |||||||||| | |||| ||||||||||||| | |  || |||    
T  13861549 caccccttccacgcgaggggggtgcacggaacgaaagataccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagtt 13861450  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| ||||| |||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  13861449 acacttcccacgatttcgtaactgttagagtaaggtgtgccattacaacggctttgcagccctccacctctataaatagggaactcaatgcagtccccaa 13861350  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||| |||  | ||| |||||||||||||||    
T  13861349 ggtagaatctttcttcttctc-aaaccctcactctct 13861314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 25239930 - 25239695
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||| ||||||||| |||| |||||||||| ||||||||||||||||||| ||||| ||| |||||| | |||| ||||||||||||| | |  ||||||    
T  25239930 cacctctttcacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaaagtctctttccacgttcccgcaataaactcacaggcggtt 25239831  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||||||||||| |||| |||||||| ||||  ||||||||||||  ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||    
T  25239830 acacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactaaatgcagtccccaa 25239731  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||| ||| |  ||| |||||||||||||||    
T  25239730 ggtagaatctttctttctctc-aaaccctcactctct 25239695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 21332508 - 21332746
Alignment:
Q  1 cacccctttc-acgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggt 99  Q
    |||||||||| || |||||| ||||||| |||||||||||||||||||||| |||||||||||||||| | |||| |||| ||||||||   || |||||    
T  21332508 cacccctttccacacaaggg-ggtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccacaataaactttctggcggt 21332606  T
Q  100 tacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtcccta 199  Q
    || |||||||| ||||| |||| ||  |||||||||||||||| |  ||||||| ||||||||||||||||| |||||||||||||||| |||||  | |    
T  21332607 tatacttcccatgatttcgtaagcgccagagccaggtgtgccactacaacggctctgcagccctccacctctgtaaataggggactcaaagcagtttcca 21332706  T
Q  200 aggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  21332707 aggtagaatctatctcttcctc-aaaccctcactctctctg 21332746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 12217771 - 12217561
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| |||||| ||| ||||||||| | || |||||||||||||| ||||||| |||    
T  12217771 ggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacacttcctacgatttcgta 12217672  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  ||||||||||      ||  ||||||| |||||||||||||||||||||||||||||||||   ||||||| |||||||||||||||||| |||    
T  12217671 accgccagagccaggt------ttacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaaggtagaatctatctctccct 12217578  T
Q  221 ctaaaccctcactctct 237  Q
    |||||||| ||||||||    
T  12217577 ctaaacccgcactctct 12217561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 9901685 - 9901901
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||   |||  ||||||||||||||||||||||||| || ||  ||||||||||| | | ||||||||||||| ||||||||||| |||    
T  9901685 ggtgcacggagcgagctagatcggttcaaatgaaccacaacgtctctctggacattcccgcaataatctctctagcggttacacgtcccacgatttcgta 9901784  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||| ||||||||||||||||||  ||||||| |||| ||||||||||||||| |||||||||||   |||||||  ||||||||| | || ||| |||    
T  9901785 accgtcagagccaggtgtgccattacaacggctctgcaaccctccacctctatatataggggactcttagcagtcctcaaggtagaaccgatatctccct 9901884  T
Q  221 ctaaaccctcactctct 237  Q
    || ||||||||||||||    
T  9901885 cttaaccctcactctct 9901901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 45313362 - 45313147
Alignment:
Q  21 ggtgcacggagcgaa-agagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgt 119  Q
    ||||||||||||||  | ||||||||||||| |||| ||||||||||| |||||| |||| |||||| | | || |||||||||||||||||||||| ||    
T  45313362 ggtgcacggagcgagcaaagactggttcaaacgaactacaacgtctctctgcacgttccc-caataatctctctggcggttacacttcccacgatttcgt 45313264  T
Q  120 aaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcc 219  Q
    |||||  |||||| |||||||||||  ||||| |||||| ||||| ||||||||| | |||| |||||   ||||||| ||||||||||||| ||||| |    
T  45313263 aaccgccagagcctggtgtgccattacaacggatttgcaaccctctacctctatata-agggaactcataacagtccccaaggtagaatctaactctttc 45313165  T
Q  220 tctaaaccctcactctct 237  Q
     |||||||||||||||||    
T  45313164 actaaaccctcactctct 45313147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 95 - 235
Target Start/End: Complemental strand, 8082186 - 8082047
Alignment:
Q  95 gcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt 194  Q
    |||||||||||| ||||||||| ||||| ||| || ||||||||||||||  || |||| ||||| |||||||||||||| |||||||||||   |||||    
T  8082186 gcggttacactttccacgatttcgtaactgttggacccaggtgtgccattacaatggctctgcagtcctccacctctatatataggggactcttagcagt 8082087  T
Q  195 ccctaaggtagaatctatctcttcctctaaaccctcactct 235  Q
    ||| || |||||||||| ||||| |||||||||||||||||    
T  8082086 ccccaatgtagaatcta-ctctttctctaaaccctcactct 8082047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 49402834 - 49402695
Alignment:
Q  95 gcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt 194  Q
    |||||||||||| ||||||| | |||||||  |||||| |||||||||||  ||||||| |||||||||||||||||||| ||||||||||||  |||||    
T  49402834 gcggttacactttccacgatctcgtaaccgccagagcctggtgtgccattacaacggctctgcagccctccacctctatatataggggactcatagcagt 49402735  T
Q  195 ccctaaggtagaatctatctcttcctctaaaccctcactc 234  Q
    ||| || ||||||| ||| ||| ||||| | |||||||||    
T  49402734 ccccaaagtagaatatatatctccctcttatccctcactc 49402695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 222
Target Start/End: Original strand, 26780824 - 26781000
Alignment:
Q  46 tcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattg 145  Q
    ||||| |||||||||||| ||| |||||| ||||||||||| | | || |||||||||||||||||| ||| ||||||   |||| | |||||| ||||     
T  26780824 tcaaacgaaccacaacgtttctctgcacgttcccgcaataatctctctggcggttacacttcccacgttttcgtaaccaccagagtctggtgtgtcatta 26780923  T
Q  146 taacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct 222  Q
     ||||||| ||||||||||||||||| |  |||||||| |||   ||||||| ||||||||||||| ||||| ||||    
T  26780924 caacggctctgcagccctccacctctctgtataggggagtcataacagtccccaaggtagaatctaactctttctct 26781000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 16396230 - 16396389
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||||| | |||||| |||||||||||| |  |||||||||||||  |||||||||||||||| | |||| ||||||||||||| | || ||||||    
T  16396230 cacccctttcccacaaggggggtgcacggagcaagcgagactggttcaagcgaaccacaacgtctctctacacgttcccgcaataaacactctggcggtt 16396329  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagc 160  Q
    |||||||||| |||||  ||| ||  |||| ||||||||||| |  ||||||| ||||||    
T  16396330 acacttcccatgatttcctaatcgccagagtcaggtgtgccactacaacggctctgcagc 16396389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 18284661 - 18284724
Alignment:
Q  172 ataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  18284661 ataaataggggactcaatgcagtccccaaggtagaatc--tctcttcctctaaaccctcactctct 18284724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 44 - 237
Target Start/End: Complemental strand, 28892105 - 28891910
Alignment:
Q  44 gttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgtta----gagccaggtgtg 139  Q
    ||||||| |||||||||||||||| |||||| | || |||| |   | || | |||||||||||||||||||| | ||| |  |    || |||| ||||    
T  28892105 gttcaaacgaaccacaacgtctctttgcacgtttccacaattatttctctggtggttacacttcccacgatttcgcaactgccaaccggacccagatgtg 28892006  T
Q  140 ccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||  ||||||| |||||| ||||||||||||| |||||||||||     |||||| |||||||||||||| |||||||||||| |||||||||||    
T  28892005 ccattacaacggctatgcagctctccacctctatatataggggactcttaagagtccccaaggtagaatctat-tcttcctctaaa-cctcactctct 28891910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 34845515 - 34845635
Alignment:
Q  95 gcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt 194  Q
    |||||||||||||||||||||| |||||||| |||  || ||||||||||  |||| || ||||  |  ||||||||||| | ||||| |||   |||||    
T  34845515 gcggttacacttcccacgatttcgtaaccgtcagacacatgtgtgccattacaacgactctgcattcacccacctctatataaagggggctcctcgcagt 34845614  T
Q  195 ccctaaggtagaatctatctc 215  Q
    ||| |||||||||||| ||||    
T  34845615 ccccaaggtagaatctctctc 34845635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 10422106 - 10422047
Alignment:
Q  177 taggggactcaatgcagtccctaaggtagaatctatctcttcctc-taaaccctcactctct 237  Q
    ||||||||||||||||||||| |||||||||  ||| ||||||||  |||||||||||||||    
T  10422106 taggggactcaatgcagtccccaaggtagaa--tatttcttcctcaaaaaccctcactctct 10422047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 15455530 - 15455441
Alignment:
Q  147 aacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||| ||||||| ||||||||||||||| |||   |||||   |||||||| ||||||||||||| |  |||||||||| |||||||||||    
T  15455530 aacgactttgcatccctccacctctatatatataagactcttagcagtccccaaggtagaatcta-ccattcctctaaatcctcactctct 15455441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 29165084 - 29164849
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||||| | |||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||| | ||||| |||    
T  29165084 cacccctttcccacaaggg-ggtgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcagtt 29164986  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||||   ||||| |||||||| ||||  ||||||| ||||||| |||||||||||||||||||||||||  |||||||| ||    
T  29164985 acacttcccacgatttcgtaacttctagagtcaggtgtgtcattacaacggctctgcagccgtccacctctataaataggggactcatagcagtccccaa 29164886  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  29164885 ggtagaatctatctcttcctctaaaccctcactctct 29164849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 240
Target Start/End: Complemental strand, 21802682 - 21802447
Alignment:
Q  5 cctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacac 104  Q
    |||| |||||||||| ||||||||||||||| |||||||||||| | |||||||||||||||| |||| | || |||||||||| | || || |||||||    
T  21802682 ccttccacgcaaggggggtgcacggagcgaaggagactggttcagacgaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacac 21802583  T
Q  105 ttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggta 204  Q
    |||| ||||||| ||||||   ||||||||||||||||||  ||||||| || ||||||| ||||||||||||||||||||||  |||||||| ||||||    
T  21802582 ttcctacgatttcgtaaccaccagagccaggtgtgccattacaacggctctgtagccctcaacctctataaataggggactcacagcagtccccaaggta 21802483  T
Q  205 gaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||    
T  21802482 gaatctatctcttcctctaaaccctcactctctctg 21802447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 30770152 - 30770384
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||| ||||||||||||||||| |||||||||||| |||| ||||||||||| | |||| ||||||||||||| |  | || |||    
T  30770152 caccccttccacacaaggg-ggtgcacggagcgaaagggactggttcaaacgaac-acaacgtctctctacacgttcccgcaataaactctttggcagtt 30770249  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||| ||||||||| |||||||  ||||||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||||  |||||||| ||    
T  30770250 acactttccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagcactccacctctataaataggggactcacagcagtccccaa 30770349  T
Q  201 ggtagaatctatctcttcctctaaaccctcactct 235  Q
    |||||||||||||||||||||||||||||||||||    
T  30770350 ggtagaatctatctcttcctctaaaccctcactct 30770384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 37 - 240
Target Start/End: Original strand, 9548968 - 9549171
Alignment:
Q  37 gagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggt 136  Q
    |||||||||||||| ||| |||||||||||| |||||| ||||||||||||| | || |||||||||||||||||||||| ||||||| |||||||||||    
T  9548968 gagactggttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggt 9549067  T
Q  137 gtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctc 236  Q
    |||||  |  ||||||| ||||||||||||||| |||||| ||||||||||| | |||||| |||||| |||||||||||||||||||||||||||||||    
T  9549068 gtgcctctacaacggctctgcagccctccacctttataaaaaggggactcaaagtagtccccaaggtaaaatctatctcttcctctaaaccctcactctc 9549167  T
Q  237 tctg 240  Q
    ||||    
T  9549168 tctg 9549171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 20093752 - 20093533
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| |||||  ||||||||||| | |  | | |||||||||||||||||||| |||    
T  20093752 ggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacattcccgcaataagctctttggtggttacacttcccacgatttcgta 20093653  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    |||| ||| |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||  |||||||| ||||||||| |||||||| |||    
T  20093652 accgctagggccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcacggcagtccccaaggtagaaactatctctccct 20093553  T
Q  221 ctaaaccctcactctctctg 240  Q
    | |||||| |||| ||||||    
T  20093552 ccaaacccgcactttctctg 20093533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 47295665 - 47295880
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||| |||| |||||||||||||| ||||| |||||||||| | |||  ||||||||||||| | | |||| |||||||||||||||||| |||    
T  47295665 ggtgcacggaacgaaggagactggttcaaacgaaccccaacgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgta 47295764  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||| ||||  ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | |||||||    
T  47295765 accgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaaggtagaatc--tttcttcct 47295862  T
Q  221 ct-aaaccctcactctct 237  Q
    || |||||||||||||||    
T  47295863 ctcaaaccctcactctct 47295880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 22705835 - 22705602
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| || ||||||  |||||||||||||||||||||| ||||||| |||||||||||| ||| |||||| ||| ||||||||  | ||| |||||    
T  22705835 caccccttccatgcaaggcgggtgcacggagcgaaagagactagttcaaacgaaccacaacgtttctctgcacgttcctgcaataaattctctaccggtt 22705736  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||| ||||| |||||||  ||||||||||||||||||  || |||| ||||| |||||||||||||||||| ||||||||   ||    | ||    
T  22705735 acacttcccatgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagtcctccacctctataaatacgggactca---ca---accaa 22705642  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  22705641 ggtagaatctatctcttcctctaaaccctcactctctctg 22705602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2249955 - 2250192
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| | |||||||| |||||||||||| |   ||||||||||||| |||||||||||||||| |||||| |||||||||||   | |||||||||    
T  2249955 caccccttccccgcaaggggggtgcacggagcaagcaagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataatatctctagcggtt 2250054  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||| ||||||||||||||||||||  | |||| |||||||||||  ||||||| |||| ||||||||||||||| ||||||||||||  |||  ||| ||    
T  2250055 acaattcccacgattttgtaaccgccaaagcctggtgtgccattacaacggctctgcaaccctccacctctatatataggggactcatagcaaaccccaa 2250154  T
Q  201 ggtagaatctatctcttcctct-aaaccctcactctct 237  Q
     ||||||||||||||||||||| |||| ||||||||||    
T  2250155 tgtagaatctatctcttcctctaaaactctcactctct 2250192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 21592861 - 21593076
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||| | |||| ||||| ||||| |   |   |||||||||||||||||||||||||    
T  21592861 ggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttacacttcccacgattttgta 21592960  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||| ||||  ||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| |  | |||||||    
T  21592961 accgtcagagtaaggtgtgccattacaacggctcagcagccctccacctctataaataggggactcaatgcagtccccaaggtagaagc--tttcttcct 21593058  T
Q  221 ct-aaaccctcactctct 237  Q
    || |||||||||||||||    
T  21593059 ctaaaaccctcactctct 21593076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 18153364 - 18153131
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||||| |||| |||||||||| | ||||||||||||||||| ||||| |||||||||| | |||| |||| |||||||| | |  ||||||    
T  18153364 caccccttccacgcgaggggggtgcacggaacaaaagagactggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcgcaggcggtt 18153265  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||||||||||| |||| |||||||| ||||  || |||||||||  |||| ||  ||||||||||||||||||||||||||||||||||||| |||| ||    
T  18153264 acacttcccaccatttcgtaaccgtcagagtaagctgtgccattacaacgactcggcagccctccacctctataaataggggactcaatgcattccccaa 18153165  T
Q  201 ggtagaatctatctcttcctct-aaaccctcactct 235  Q
    |||||||||  | ||||||||| |||||||||||||    
T  18153164 ggtagaatc--tttcttcctctcaaaccctcactct 18153131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 21 - 227
Target Start/End: Complemental strand, 7595565 - 7595360
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||  ||||| |||||||| ||||||||| |||||| |||||| ||||||||||||| | || |||||||||||||||||||||| |||    
T  7595565 ggtgcacggagcgagcgagaccggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgta 7595466  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||    || ||||||||||| |||  ||||||||||||||||||||||||||||||||||||| |||   ||| ||| ||||||||||||||||||||||    
T  7595465 acatccagcgccaggtgtgctattacaacggctttgcagccctccacctctataaataggggaatcatgacagaccc-aaggtagaatctatctcttcct 7595367  T
Q  221 ctaaacc 227  Q
     ||||||    
T  7595366 ttaaacc 7595360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 237
Target Start/End: Complemental strand, 18185829 - 18185625
Alignment:
Q  32 cgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagc 131  Q
    ||||||||||||||||||| ||||| |||||||||| | || | ||||||||||||| | | |||||||||||||||| |||||| |||||||| ||||     
T  18185829 cgaaagagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcagagt 18185730  T
Q  132 caggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct-aaaccctc 230  Q
     ||||||||| ||  ||||||| ||||||||||||| | ||| ||||||||||||||||||||||| |  ||||||||  | ||||||||| ||||||||    
T  18185729 aaggtgtgccgttaaaacggctctgcagccctccacatttattaataggggactcaatgcagtccccagcgtagaatc--tttcttcctctcaaaccctc 18185632  T
Q  231 actctct 237  Q
    |||||||    
T  18185631 actctct 18185625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 22704002 - 22703894
Alignment:
Q  131 ccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctc 230  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||| ||||||||  |||||||| ||||||||||||||||| ||||||||||||||    
T  22704002 ccaggtgtgccattacaacggctctgcagccctccacctctataaatatgggactcacagcagtccccaaggtagaatctatctcgtcctctaaaccctc 22703903  T
Q  231 actctctct 239  Q
    |||||||||    
T  22703902 actctctct 22703894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 38612751 - 38612620
Alignment:
Q  43 ggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgcca 142  Q
    |||||||| ||||||||||||| || |||||| |||| |||||| | | || || |||||||||||||||||||||||||||  |||||| ||||| |||    
T  38612751 ggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacacttcccacgattttgtaaccgccagagcctggtgtacca 38612652  T
Q  143 ttgtaacggctttgcagccctccacctctata 174  Q
    ||  ||||||| |||||  |||||||||||||    
T  38612651 ttacaacggctctgcagatctccacctctata 38612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 95 - 237
Target Start/End: Original strand, 28794085 - 28794226
Alignment:
Q  95 gcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt 194  Q
    |||||||||||||||||||||| |||||||| |||  || ||||||||||  ||||||| |||||||   ||||| |||| |||||||||||    ||||    
T  28794085 gcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatataggggactcttaacagt 28794184  T
Q  195 ccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||| |||||||||||||| ||| |||||||||||||| |||||    
T  28794185 ccccaaggtagaatctat-tctccctctaaaccctcattctct 28794226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 30764982 - 30765114
Alignment:
Q  39 gactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgt 138  Q
    |||||||||||  ||||||||| |||||| |||||  ||||||||| |   | || |||||||||||||||||||||| ||| ||||  || | ||||||    
T  30764982 gactggttcaagcgaaccacaatgtctctttgcacattcccgcaattatttctctggcggttacacttcccacgatttcgtacccgtcggacctaggtgt 30765081  T
Q  139 gccattgtaacggctttgcagccctccacctct 171  Q
    |||| |  ||| ||| |||||||||||||||||    
T  30765082 gccactacaacagctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 21801853 - 21801894
Alignment:
Q  45 ttcaaatgaaccacaacgtctctatgcacgatcccgcaataa 86  Q
    |||||| |||||||||||||||| |||||| |||||||||||    
T  21801853 ttcaaacgaaccacaacgtctctctgcacgttcccgcaataa 21801894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 1505 - 1724
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||| | |||| ||||||||||||| | || ||||||||||||| ||||||||| ||    
T  1505 ggtgcacggagcgaaagagactggttcaaacgaaccacaacatctctctacacgttcccgcaataaactctctggcggttacacttctcacgattttata 1604  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    || | |||||||||||||||||||  ||| ||| | ||||| ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||    
T  1605 actgctagagccaggtgtgccattacaacagctctacagccgtccacctctataaatagggcactcaaagcagtccccaaggtagaatctatctcttcct 1704  T
Q  221 ctaaaccctcactctctctg 240  Q
    ||||||||||||||||||||    
T  1705 ctaaaccctcactctctctg 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 391696 - 391459
Alignment:
Q  1 cacccctttcacgcaagggcgg-tgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggt 99  Q
    |||||||||| |||||||| || ||||||||||||  |||||| ||||||| |||||||||||||||| |||| | ||||||||||||| | || |||||    
T  391696 cacccctttcccgcaagggggggtgcacggagcgagcgagactagttcaaacgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggt 391597  T
Q  100 tacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtcccta 199  Q
    |||||||||||  |||| |||||||  ||||||||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||  |||||||| |    
T  391596 tacacttcccataatttcgtaaccgccagagccaggtgtgccattacaacggctctgcaaccctccacctctataaataggggactcatagcagtcccca 391497  T
Q  200 aggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||||||||||||||||||||||||||||||||||||||    
T  391496 aggtagaatctatctcttcctctaaaccctcactctct 391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 380997 - 380763
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    ||||||||||  ||||||| ||||||||||||||  |||||||||||||| |||||||||||||||| | |||| ||||||||||||  | || ||||||    
T  380997 cacccctttcctgcaaggggggtgcacggagcgagcgagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaagtctctggcggtt 380898  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||||||| ||| |||| ||||||   ||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||  |||||||| |     
T  380897 acacttctcacaatttcgtaacctccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccccat 380798  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctc 236  Q
    |||| |||||||||||||||||||||||||||||||    
T  380797 ggta-aatctatctcttcctctaaaccctcactctc 380763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 12 - 237
Target Start/End: Original strand, 28067999 - 28068223
Alignment:
Q  12 cgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccac 111  Q
    |||||||| ||||||||||||||  |||||||||||||| || || |||||||||| |||||| ||| ||||||||| | |  |||||||||||||||||    
T  28067999 cgcaaggg-ggtgcacggagcgagcgagactggttcaaacgagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttacacttcccac 28068097  T
Q  112 gattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatcta 211  Q
    ||||| |||||||  ||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||     
T  28068098 gatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcatagcagtccctaaggtagaatctc 28068197  T
Q  212 tctcttcctctaaaccctcactctct 237  Q
    ||||||||||||||||||||||||||    
T  28068198 tctcttcctctaaaccctcactctct 28068223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 5931426 - 5931187
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||| |||||| |||||||||||||| ||||||||||||||| |||||||||||||||| | |||  ||||||||||||| | || ||||||    
T  5931426 caccccttccacacaaggggggtgcacggagcgatagagactggttcaaacgaaccacaacgtctctctacacattcccgcaataaactctctggcggtt 5931327  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
     |||||||||||||||  ||||||  ||| ||||||||| ||||  ||||||| |||||||||||||||||||||||||||||||||   ||||||| ||    
T  5931326 gcacttcccacgatttcataaccgccagaaccaggtgtgtcattacaacggctctgcagccctccacctctataaataggggactcacgacagtccccaa 5931227  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    | |||||||||||||| |||||||||||||||||||||||    
T  5931226 gatagaatctatctctccctctaaaccctcactctctctg 5931187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 23495583 - 23495349
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| |||||||||| |||||||||| |||||||||| |||||||| ||||| |||||||||| | |||| ||||||||||||| | |   |||||    
T  23495583 caccccttccacgcaaggg-ggtgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacagacggtt 23495485  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||||||| ||||  ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  23495484 acacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaa 23495385  T
Q  201 ggtagaatctatctcttcctct-aaaccctcactctct 237  Q
     ||||||||  ||||||||||| ||||| |||||||||    
T  23495384 tgtagaatc--tctcttcctctaaaaccttcactctct 23495349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 20899560 - 20899795
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||| ||||| |||||||||| | |||| ||||||||||||| | |  ||||||    
T  20899560 caccccttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggtt 20899659  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||||||| ||||  ||||||||||||  ||||  | ||||||||||||||| ||||||||||||||||||||||||||| ||    
T  20899660 acacttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacgaatctgcagccctccacctttataaataggggactcaatgcagtccccaa 20899759  T
Q  201 ggtagaatctatctcttcctct-aaaccctcactctct 237  Q
    ||| |||||  | ||||||||| |||||||||||||||    
T  20899760 ggttgaatc--tttcttcctctaaaaccctcactctct 20899795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 8244751 - 8244508
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||| | |||||| ||    
T  8244751 caccccttccacgcaaggg-ggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccccaataaactctctagcgatt 8244653  T
Q  101 acacttcccacgattttgtaaccgttagagcca------ggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt 194  Q
    |||||| ||||||||| |||||||  |||||||      | ||||||| |   ||| || |||||||||||||||||||||||| ||||||||   ||||    
T  8244652 acactttccacgatttcgtaaccgccagagccatgtaatgatgtgcca-tcacacgactctgcagccctccacctctataaataagggactcacatcagt 8244554  T
Q  195 ccctaaggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||  ||||||||||||||||||||||| ||||||||||||||||||    
T  8244553 cctcaaggtagaatctatctcttcctcaaaaccctcactctctctg 8244508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 36712614 - 36712848
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||||| |||| |||||||||| ||||||||||| ||||||| ||||| |||||||||| | |||| || |||||||||  | |  | ||||    
T  36712614 caccccttccacgctaggg-ggtgcacggaacgaaagagactagttcaaacgaaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggtt 36712712  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||| ||||||||| |||||||| ||||  ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  36712713 acactttccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccccaa 36712812  T
Q  201 ggtagaatctatctcttcctct-aaaccctcactctct 237  Q
    |||||||||  | ||||||||| |||||||||||||||    
T  36712813 ggtagaatc--tttcttcctctcaaaccctcactctct 36712848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 237
Target Start/End: Original strand, 5590662 - 5590896
Alignment:
Q  2 acccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtta 101  Q
    ||||||||||||| |||  ||||||| || ||||||||||||||||||| ||||| |||||||||| | |||  ||||||||||||| | |  |||||||    
T  5590662 acccctttcacgcgaggagggtgcacagaacgaaagagactggttcaaacgaaccccaacgtctctttccacattcccgcaataaactcgcaggcggtta 5590761  T
Q  102 cacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaag 201  Q
    |||||||||| |||| |||||||| ||||  ||||||||||||  ||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||    
T  5590762 cacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgctgccctccacctctataaataggggattcaatgcagtccccaag 5590861  T
Q  202 gtagaatctatctcttcctct-aaaccctcactctct 237  Q
    ||||||||  | ||||||||| ||||||| |||||||    
T  5590862 gtagaatc--tttcttcctctcaaacccttactctct 5590896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 21 - 225
Target Start/End: Original strand, 15620175 - 15620379
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||| |||||||||  ||||| |||||||| || ||||||||||||| |||||| |||| |||||||| | || ||||||||||||||||| |||| |||    
T  15620175 ggtgtacggagcgagcgagacgggttcaaacgagccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcccacaatttcgta 15620274  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||| ||||||| ||||||||||  ||| ||| | ||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||||||    
T  15620275 accgtcagagccaagtgtgccattacaacagctctacagcccttcacctctataaataggggactcatagcagtccccaaggtagaatctatctcttcct 15620374  T
Q  221 ctaaa 225  Q
     ||||    
T  15620375 ataaa 15620379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 44 - 237
Target Start/End: Original strand, 22922645 - 22922838
Alignment:
Q  44 gttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccat 143  Q
    ||||||| |||||||||| ||||| || | | | | ||||||||| | || |||||||||||||||||||||| ||||||| |||||||||||||| ||     
T  22922645 gttcaaacgaaccacaacctctctctgtatgtttcagcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcac 22922744  T
Q  144 tgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |  ||||||| || ||||||||||||||||||||||||||||||   || |||| |||||||||||||||||||||||||||||||||||||||    
T  22922745 tacaacggctctgtagccctccacctctataaataggggactcataacaatccccaaggtagaatctatctcttcctctaaaccctcactctct 22922838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 41037621 - 41037854
Alignment:
Q  13 gcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacg 112  Q
    ||||||| |||||||| ||| |  ||||||||||||||||||| | ||| ||| | |||||| || |||||||||| | || ||||||||||||||||||    
T  41037621 gcaaggggggtgcacgaagcaagcgagactggttcaaatgaacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacg 41037720  T
Q  113 attttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacc---------tctataaataggggactcaatgcagtccctaaggt 203  Q
    |||| |||||||  ||||||||||||||||||  |||||||  |||||||||||||         |||||||||||||||||||  |||||||| |||||    
T  41037721 atttcgtaaccgccagagccaggtgtgccattacaacggctccgcagccctccacctctataaattctataaataggggactcatagcagtccccaaggt 41037820  T
Q  204 agaatctatctcttcctctaaaccctcactctct 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  41037821 agaatatatctcttcctctaaaccctcactctct 41037854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 42792705 - 42792481
Alignment:
Q  13 gcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacg 112  Q
    ||||||| ||||||| |||| |  ||||| |||||||| ||  |||||||| ||| |||||| ||||||||||||| | |||||||||||||||||||||    
T  42792705 gcaaggggggtgcacagagcaagcgagaccggttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacg 42792606  T
Q  113 attttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctat 212  Q
    |||| |||||||  |||||||||||||||| |  ||| ||| ||||||||||||||||||||| |||||||||||   || |||| ||||||||||||||    
T  42792605 atttcgtaaccgccagagccaggtgtgccactacaactgctctgcagccctccacctctataactaggggactcataacaatccccaaggtagaatctat 42792506  T
Q  213 ctcttcctctaaaccctcactctct 237  Q
    |||   ||||||||||||| |||||    
T  42792505 ctccctctctaaaccctcattctct 42792481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 46 - 237
Target Start/End: Original strand, 22922050 - 22922241
Alignment:
Q  46 tcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattg 145  Q
    ||||| |||||||||||||||| || ||| | | | |||||||   || |||||||||||||||||||||||||||||   ||||||||||||| || |     
T  22922050 tcaaacgaaccacaacgtctctctgtacgtttcaggaataaactttctggcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcacta 22922149  T
Q  146 taacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
     ||||||| || ||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||||||||||||||||||||||    
T  22922150 caacggctctgtagccctccacctctataaataggggactcataacagttcccaaggtagaatctatctcttcctctaaaccctcactctct 22922241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 38608435 - 38608267
Alignment:
Q  69 tgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacc 168  Q
    |||||| ||||||||||||| |  | |||||||||||||||||||||| |||||||  |||||||||||||||     ||||||| || || ||||||||    
T  38608435 tgcacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctccacc 38608336  T
Q  169 tctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct-aaaccctcactctct 237  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||||||||||    
T  38608335 tctataaataggggactcaatgcagtccctaaggtagaatct-tttctccctctaaaaccctcactctct 38608267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 231
Target Start/End: Original strand, 33622474 - 33622686
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||| || ||||||||||||||| ||| ||||| |||||||||| |  ||| ||| ||||||||| | |  |||||||||||||||| ||||| |||    
T  33622474 ggtgcacagaacgaaagagactggtttaaacgaaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttcccaggatttcgta 33622573  T
Q  121 acc---gttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctctt 217  Q
    |||   || ||||  |||||||  |||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||| ||||    
T  33622574 accaccgtcagagtaaggtgtgtaattacaacggctctgcagccctccacctctataaataggggactcaatgcagtccctaagatagaa--tatttctt 33622671  T
Q  218 cctct-aaaccctca 231  Q
    ||||| |||||||||    
T  33622672 cctctcaaaccctca 33622686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13537965 - 13537878
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaac 88  Q
    |||||||| ||||| |||| |||| ||||| ||||||||||||||||||||||||| |||||||||| | |||| |||||||||||||    
T  13537965 caccccttccacgcgaggggggtgtacggaacgaaagagactggttcaaatgaaccccaacgtctctttccacgttcccgcaataaac 13537878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 22510217 - 22510097
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| ||||| |||  |||||||||| ||||||||||||||| ||| ||||  |||||||||| | || | ||||||||||||| | |  ||||||    
T  22510217 caccccttccacgcgaggtgggtgcacggaacgaaagagactggttaaaacgaactccaacgtctctttccatgttcccgcaataaactcacaggcggtt 22510118  T
Q  101 acacttcccacgattttgtaa 121  Q
    |||||||||||||||| ||||    
T  22510117 acacttcccacgatttcgtaa 22510097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 165
Target Start/End: Original strand, 19329925 - 19330052
Alignment:
Q  38 agactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtg 137  Q
    |||| |||||||| || |||||||||  || |||| | ||||||||||| | | || |||||||||||||||||||||| |||||||  |||||  ||||    
T  19329925 agaccggttcaaacgagccacaacgttactctgcatgttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgccagagcttggtg 19330024  T
Q  138 tgccattgtaacggctttgcagccctcc 165  Q
    |||||||  || |||| || ||||||||    
T  19330025 tgccattacaatggctctgtagccctcc 19330052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 19330054 - 19330092
Alignment:
Q  199 aaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19330054 aaggtagaatctatctcttcctctaaaccctcactctct 19330092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 16280 - 16516
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||||| | |||||| ||||||||||||||| |||||||||||||| |||||||||| ||||| |||||| ||||||||||||| | || | ||||    
T  16280 cacccctttcccacaaggg-ggtgcacggagcgaatgagactggttcaaacgaaccacaacatctctctgcacgttcccgcaataaactctctggtggtt 16378  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt-cccta 199  Q
    ||||||||||||||||||||||||  |||||||||||| |||||  || |||| |||||||||||||||||||||||||||||||||| ||||| ||| |    
T  16379 acacttcccacgattttgtaaccgccagagccaggtgtaccattacaatggctctgcagccctccacctctataaataggggactcaaagcagtccccca 16478  T
Q  200 aggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||||||||| ||||||||||| ||||| ||||||||||    
T  16479 aggtagaatttatctcttcctttaaactctcactctct 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 30021 - 30256
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| || ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| | |||| ||||||||||||  | || | ||||    
T  30021 caccccttccatgcaagggaggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaaatctctggaggtt 30120  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||||||||||| |||| ||||||   |||||||||||| || ||  || |||| |||||||||||||||||||||||| ||||||||  |||||||||||    
T  30121 acacttcccacaatttcgtaaccaccagagccaggtgttccgttacaatggctctgcagccctccacctctataaatacgggactcacagcagtccctaa 30220  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctc 236  Q
    ||||||||||||||||||||||||| ||||||||||    
T  30221 ggtagaatctatctcttcctctaaatcctcactctc 30256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 124; Significance: 7e-64; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 1843 - 1609
Alignment:
Q  2 acccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaa-cgccctagcggtt 100  Q
    ||||||| ||| |||||| ||||| |||||||||||||| ||||||||| |||||||||||||||| |||||| |||||||||||| | | || ||||||    
T  1843 accccttccacacaaggg-ggtgcccggagcgaaagagattggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaaactctctggcggtt 1745  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||||||||| |||||||  ||||||| || |||||||  ||||||| ||||||| |||||||||||||||||||||||||   ||||||| ||    
T  1744 acacttcccacgatttcgtaaccgccagagccaagtatgccattacaacggctctgcagccatccacctctataaataggggactcacaacagtccccaa 1645  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctc 236  Q
     |||||||||||||||||||||||||||||||||||    
T  1644 tgtagaatctatctcttcctctaaaccctcactctc 1609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 95 - 237
Target Start/End: Complemental strand, 15507 - 15365
Alignment:
Q  95 gcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt 194  Q
    |||||||||||||||||||||| |||||||  |||| ||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||   ||||    
T  15507 gcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaataggggactcataacagt 15408  T
Q  195 ccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||   |||||||||||||||||||||||||||||||||||||    
T  15407 ccccgcggtagaatctatctcttcctctaaaccctcactctct 15365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 21 - 234
Target Start/End: Original strand, 1024 - 1237
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||  |||||||||||||| |||||||||||| ||| |||| | ||| ||||||||| |  | |||||||||||||||||||||| |||    
T  1024 ggtgcacggagcgagcgagactggttcaaacgaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacacttcccacgatttcgta 1123  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    | || ||||||||||||| |||||  ||||||| || ||||||||||||||||||||||||||||||  |||||| | || |||||||||||||||||||    
T  1124 atcgctagagccaggtgttccattacaacggctatgtagccctccacctctataaataggggactcacagcagtctccaacgtagaatctatctcttcct 1223  T
Q  221 ctaaaccctcactc 234  Q
    ||||||||||||||    
T  1224 ctaaaccctcactc 1237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 22915286 - 22915052
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||| ||| ||||||||  |||||||||||||  |||||| ||||||| ||| |||||||||||| | |||| ||||||||||||| | ||||| |||    
T  22915286 cacccccttcccgcaaggg--gtgcacggagcgagcgagactagttcaaacgaatcacaacgtctctcttcacgttcccgcaataaactctctagctgtt 22915189  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    ||||||||||||||||  ||||||   |||||| |||| |||||  ||||||| |||||| |||||||| |||||||||||||||||  |||||||| ||    
T  22915188 acacttcccacgatttcataaccgccggagccaagtgtaccattacaacggctctgcagctctccacctttataaataggggactcatagcagtccccaa 22915089  T
Q  201 ggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  22915088 ggtagaatctatctcttcctctaaaccctcactctct 22915052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 237
Target Start/End: Original strand, 16852987 - 16853208
Alignment:
Q  16 agggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgatt 115  Q
    |||| ||| ||||||||||  || || ||||||||  | ||||||||||||| |||||| | ||||||||||| | || |||||||||||||||||||||    
T  16852987 agggaggtacacggagcgagtgacaccggttcaaacaagccacaacgtctctctgcacgttaccgcaataaactctctggcggttacacttcccacgatt 16853086  T
Q  116 ttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctc 215  Q
    | |||||||  ||||||||||||||||||  |||   ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||    
T  16853087 tcgtaaccgccagagccaggtgtgccattacaacatatttgcagccctccacctctataaataggggactcaatgcagtccccaagggagaatct-tttc 16853185  T
Q  216 tt-cctctaaaccctcactctct 237  Q
    || ||||||||||||| ||||||    
T  16853186 ttccctctaaaccctcgctctct 16853208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 19790498 - 19790346
Alignment:
Q  14 caagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacga 113  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||||||||||| |||||| |||| |||||||| | ||  ||||||||||||||||||    
T  19790498 caaggggggtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacacttcccacga 19790399  T
Q  114 ttttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctcca 166  Q
    ||| |||||||| |||| |||||||||||||  ||||||| ||||||||||||    
T  19790398 tttcgtaaccgtcagagtcaggtgtgccattacaacggctctgcagccctcca 19790346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 1998087 - 1998003
Alignment:
Q  156 gcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctctctg 240  Q
    ||||| |||||||||||||||||||| |||||| |||||||| |||||||||||| |||||  ||||||||||||||||||||||    
T  1998087 gcagctctccacctctataaatagggtactcaaagcagtccccaaggtagaatctgtctctgtctctaaaccctcactctctctg 1998003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 16914900 - 16914706
Alignment:
Q  43 ggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgcca 142  Q
    |||||||| || || |||||||||| |||||| ||||||||| |   | |||  |||||||| ||||||||||| |||||||  ||| | |  |||||||    
T  16914900 ggttcaaacgagccgcaacgtctctttgcacgttcccgcaattatttctctactggttacacctcccacgatttcgtaaccgccagaccgatctgtgcca 16914801  T
Q  143 ttgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||  || |||| |||||||||||||||||||| |||| || |||    ||||||| || | |||||||||||||||||| |||||||||||||||    
T  16914800 ttacaatggctctgcagccctccacctctatatatagagggctcttaacagtccccaaagcagaatctatctcttcctcaaaaccctcactctct 16914706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 19773462 - 19773386
Alignment:
Q  162 ctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcc-tctaaaccctcactctct 237  Q
    ||||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  19773462 ctccacctctataaataggagactcacagcagtccccaaggtagaatctatctcttccttctaaaccctcactctct 19773386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 22006574 - 22006495
Alignment:
Q  155 tgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactct 235  Q
    |||||||||||||||||||| ||| |||||||   |||||||| |||||||||||| |||   ||||| ||||||||||||    
T  22006574 tgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct-tcttcccctcttaaccctcactct 22006495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 22014091 - 22014012
Alignment:
Q  155 tgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactct 235  Q
    |||||||||||||||||||| ||| |||||||   |||||||| |||||||||||| |||   ||||| ||||||||||||    
T  22014091 tgcagccctccacctctatatataagggactcgtagcagtccccaaggtagaatct-tcttcccctcttaaccctcactct 22014012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 237
Target Start/End: Original strand, 3559228 - 3559317
Alignment:
Q  147 aacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||||||| |||||||  ||| ||||||| |||||||||||    |||| || ||||||||||||| |||| |||||||||||||| |||||    
T  3559228 aacggctctgcagccacccatctctatatataggggactcttaacagttcccaaggtagaatcta-ctctccctctaaaccctcattctct 3559317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 123
Target Start/End: Original strand, 11578849 - 11578877
Alignment:
Q  95 gcggttacacttcccacgattttgtaacc 123  Q
    |||||||||||||||||||||||||||||    
T  11578849 gcggttacacttcccacgattttgtaacc 11578877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 237
Target Start/End: Complemental strand, 253512 - 253313
Alignment:
Q  38 agactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtg 137  Q
    |||| ||||||||||||||||||| ||||| |||||| ||||||||||||| | || || ||||||||||||||||||| |||||||  |||||||||||    
T  253512 agaccggttcaaatgaaccacaacatctctctgcacgttcccgcaataaactctctggcagttacacttcccacgatttcgtaaccgccagagccaggtg 253413  T
Q  138 tgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    |||||||  |||| |||||||||| ||||||| |||| |||||||||||| | ||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  253412 tgccattacaacgactttgcagccgtccacctttatatataggggactcactacagtccccaaggtagaatctaactcttcctctaaaccgtcactctct 253313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 242889 - 242673
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||   |||| |||||||| |||||||||||||||| |||||| ||||||||||||| |  | || ||||||||||||||||||  |||    
T  242889 ggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttcccacgattacgta 242790  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  ||||||||||||||||||  ||||||| ||| |||||||||||||||| |||| | ||||| | ||||||| | | ||||||||| ||||||||    
T  242789 accgcaagagccaggtgtgccattacaacggctctgccgccctccacctctatatatagagtactcacttcagtccccaggatagaatctaactcttcct 242690  T
Q  221 ctaaaccctcactctct 237  Q
    ||||| |||||||||||    
T  242689 ctaaatcctcactctct 242673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 151275 - 151490
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    ||||||||||||||  ||||| | |||||| |||||||||||||||| || ||| ||| ||||||||| | || ||| || ||||||||||||||| |||    
T  151275 ggtgcacggagcgagcgagaccgattcaaacgaaccacaacgtctctctgtacgttcctgcaataaactctctggcgttt-cacttcccacgatttcgta 151373  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    |||| ||||||||||| | ||| |  ||||||| |||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  151374 accgctagagccaggtcttccactacaacggctctgcagccctccacctctataaataggggactcacagcattccctaaggtagaatctatctcttcct 151473  T
Q  221 ctaaaccctcactctct 237  Q
     ||||||||||||||||    
T  151474 ttaaaccctcactctct 151490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 68894 - 68675
Alignment:
Q  16 agggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgatt 115  Q
    |||| |||||||||||| |  |||||| ||||||| || |||||||||||||   |||| ||||||||||||| | ||||||||||||||||||||||||    
T  68894 aggggggtgcacggagcaaccgagactagttcaaacgagccacaacgtctcttcccacgttcccgcaataaactctctagcggttacacttcccacgatt 68795  T
Q  116 ttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctc 215  Q
    | |||||||  | ||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||  ||||| || |||||||||||||| ||    
T  68794 tcgtaaccgccaaagcaaggtgtgtcattacaacggctttgcagccctccacctctataaataggggactcaccgcagtgcccaaggtagaatctatatc 68695  T
Q  216 ttcctctaaaccctcactct 235  Q
    |||||| | ||||| |||||    
T  68694 ttcctcgatacccttactct 68675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 37 - 237
Target Start/End: Complemental strand, 75045 - 74845
Alignment:
Q  37 gagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggt 136  Q
    |||||||||||||| || ||||||||| |||  ||||| ||||||||||||| | || |||||||||||||| |||||||  |||| |  ||||||||||    
T  75045 gagactggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgccagagccaggt 74946  T
Q  137 gtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctc 236  Q
    ||||||||  ||||||| | |||||||||||||||||||||||||||||||  ||| |||| ||||||||||||||||||||||||| ||| ||||||||    
T  74945 gtgccattacaacggctctacagccctccacctctataaataggggactcaccgcattccccaaggtagaatctatctcttcctctataccatcactctc 74846  T
Q  237 t 237  Q
    |    
T  74845 t 74845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 7334 - 7548
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||| ||||||||||||||||||| ||||| |||||||||| | |||| ||||||||||||| | |  || ||||||||||| ||||||| |||    
T  7334 ggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacacttccaacgatttcgta 7433  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    || || ||||  ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||  | |||||||    
T  7434 ac-gtcagagtaaggtgtgccattacaacggctttgcagccctccacctctataaataggggactcaatgcaatccccaaggtagaatc--tttcttcct 7530  T
Q  221 ct-aaaccctcactctct 237  Q
    || |||||||||| ||||    
T  7531 ctcaaaccctcaccctct 7548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 25 - 237
Target Start/End: Original strand, 4184 - 4396
Alignment:
Q  25 cacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccg 124  Q
    ||||||||||  | ||| |||||||| |||||||||||||| | |||||| || |||||||||| | || || ||||||| ||||||||||| ||||||     
T  4184 cacggagcgagcgggaccggttcaaacgaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacacatcccacgatttcgtaacca 4283  T
Q  125 ttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaa 224  Q
      |||||||||||||||| |  ||||||| |||||||||||||||||||||||||||||||||   ||||||| |||  |||||||||||||||||||||    
T  4284 ccagagccaggtgtgccactacaacggctctgcagccctccacctctataaataggggactcacatcagtccccaagagagaatctatctcttcctctaa 4383  T
Q  225 accctcactctct 237  Q
    |||||||||||||    
T  4384 accctcactctct 4396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 95; Significance: 1e-46; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 237
Target Start/End: Complemental strand, 15087 - 14872
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||| |||||||||  |||||||| ||||| || ||||||| | |||| ||||||||||||| | |  || ||||||||||||||||||| |||    
T  15087 ggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttacacttcccacgatttcgta 14988  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||| ||||  ||||||||||||  ||||||| ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||  | |||||||    
T  14987 accgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaataggggactcaatgcagtccccaaggtagaatc--tttcttcct 14890  T
Q  221 ct-aaaccctcactctct 237  Q
    || |||||||||||||||    
T  14889 ctaaaaccctcactctct 14872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17289 - 17202
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaac 88  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||| ||||| |||||||||| | |||| |||||||||||||    
T  17289 caccccttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaac 17202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 17190 - 17087
Alignment:
Q  133 aggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct-aaaccctca 231  Q
    ||||||||||||  ||| ||| |||||||||||||||||||||||| |||||||||||||||| | |||||||||||  | ||||||||| ||||||| |    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatgggactcaatgcagtctccaaggtagaatc--tttcttcctctaaaaccctta 17093  T
Q  232 ctctct 237  Q
    ||||||    
T  17092 ctctct 17087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 204
Target Start/End: Original strand, 54576 - 54770
Alignment:
Q  10 cacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttccc 109  Q
    ||||| |||| || ||||||| |||| |||||||||||||| ||| | |||||||||| | |||| ||||||||||||| | |  | |||||||||||||    
T  54576 cacgcgaggggggcgcacggaacgaaggagactggttcaaacgaaacccaacgtctctctccacgttcccgcaataaactcacaggtggttacacttccc 54675  T
Q  110 acgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggta 204  Q
    | ||||| |||||||| ||||  |||||| |||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54676 atgatttcgtaaccgtcagagtaaggtgtaccattacaacggctatgcagccctccacctctataaataggggactcaatgcagtcccaaaggta 54770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 12535 - 12323
Alignment:
Q  23 tgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaac 122  Q
    ||||| |||||||  |||| |||| |||||| ||||||||||| |  ||||| ||||||||||| | | ||||||||||||||||||| |||||||||||    
T  12535 tgcacagagcgaacaagaccggtttaaatgagccacaacgtctgt--gcacgttcccgcaataatctctctagcggttacacttcccatgattttgtaac 12438  T
Q  123 cgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctct 222  Q
    ||  |||||| |||||||||||  ||||||| ||||||||| |||||||||| ||||||||||||   ||  ||| |||||| |||||| || |||||||    
T  12437 cgccagagcctggtgtgccattacaacggctctgcagcccttcacctctatatataggggactcataacaaaccccaaggtataatctaactattcctct 12338  T
Q  223 aaaccctcactctct 237  Q
    |||||||||||||||    
T  12337 aaaccctcactctct 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 2814 - 3029
Alignment:
Q  21 ggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgta 120  Q
    |||||||||||||||  |||| |||||||| ||| ||||| |||||| |||||| ||| | ||||| | | ||||||||||||||||||||||||| |||    
T  2814 ggtgcacggagcgaacaagaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttacacttcccacgatttcgta 2913  T
Q  121 accgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcct 220  Q
    ||||  |||||| |||||||||||  ||| ||| |||||| ||||||||||||| ||| ||||||||   ||||||| ||||||||||||| ||||| ||    
T  2914 accgccagagcctggtgtgccattacaacagctctgcagctctccacctctatatata-gggactcataacagtcccgaaggtagaatctaactctttct 3012  T
Q  221 ctaaaccctcactctct 237  Q
    | || ||||||||||||    
T  3013 cgaagccctcactctct 3029  T

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Target: scaffold0096 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 10836 - 11071
Alignment:
Q  1 cacccctttcacgcaagggcggtgcacggagcgaaagagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcggtt 100  Q
    |||||||| || || ||||  ||||| ||| |||||||||| |||||||| ||| | |||||||||| | || | ||||||||||||| | |  ||||||    
T  10836 caccccttccatgcgaggggagtgcaaggaacgaaagagaccggttcaaaagaaacccaacgtctctttccatgttcccgcaataaactcacaggcggtt 10935  T
Q  101 acacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaa 200  Q
    |||||||||| ||||| |||||||| ||||  ||||||||||||  ||||||| | ||||||||||||| ||||||||| |||||||||| |||||| ||    
T  10936 acacttcccatgatttcgtaaccgtcagagttaggtgtgccattacaacggctctacagccctccacctttataaatagtggactcaatggagtccccaa 11035  T
Q  201 ggtagaatctatctcttcctct-aaaccctcactctct 237  Q
    || ||||||  | ||||||||| ||||||||| |||||    
T  11036 gggagaatc--tttcttcctctaaaaccctcattctct 11071  T

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Target: scaffold0299 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 19260 - 19147
Alignment:
Q  127 agagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaac 226  Q
    ||||| ||||||||| ||  || |||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||     
T  19260 agagctaggtgtgccgttacaatggctctgcagccctccacctctataaataggggactcactgcagtccccaaggtagaatctatctcttcctctaaat 19161  T
Q  227 cctcactctctctg 240  Q
    ||||||||||||||    
T  19160 cctcactctctctg 19147  T

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Target: scaffold0025 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 86424 - 86562
Alignment:
Q  99 ttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtccct 198  Q
    |||||||| ||||||||| |||| ||  ||||||  ||||||||||  |||| ||||||| ||||||||||||||| ||||||||||||  ||||||||     
T  86424 ttacactttccacgatttcgtaatcgccagagcctagtgtgccattacaacgactttgcaaccctccacctctatatataggggactcatagcagtcccg 86523  T
Q  199 aaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||| |||||||||| ||||||||||||| ||||||||||    
T  86524 aagatagaatctatttcttcctctaaactctcactctct 86562  T

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Target: scaffold0013 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 237
Target Start/End: Original strand, 37242 - 37425
Alignment:
Q  53 aaccacaacgtctctatgcacgatcccgcaataaacgccctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggc 152  Q
    |||| |||||||||| |||| | ||| ||||||| | | || ||||||||||||||||||||||  ||||||  |||||| || |||||||   ||||||    
T  37242 aaccgcaacgtctctctgcatgttcctgcaataatctctct-gcggttacacttcccacgatttcataaccgccagagcctggcgtgccatcacaacggc 37340  T
Q  153 tttgcagccctccacctctataaataggggactcaatgcagtccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    | |||||||||||||||||||| |||||||||||   |||||||  ||| ||||||| |||||| ||||| ||||||||||||||    
T  37341 tctgcagccctccacctctatatataggggactcgtggcagtccgcaagatagaatcaatctctccctcttaaccctcactctct 37425  T

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Target: scaffold0011 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 20339 - 20455
Alignment:
Q  92 ctagcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgc 191  Q
    |||||||||||||||||||| |||||||||||| | || ||| |||| |||||  ||||||| |||||||||||||||||| |||||||||||||    |    
T  20339 ctagcggttacacttcccacaattttgtaaccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaaataggggactcttaac 20438  T
Q  192 agtccctaaggtagaat 208  Q
    |||||| ||||||||||    
T  20439 agtccccaaggtagaat 20455  T

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Target: scaffold0063 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 95 - 237
Target Start/End: Original strand, 49284 - 49425
Alignment:
Q  95 gcggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagt 194  Q
    |||||||||||||||||||||| |||||| || ||  ||  |||||||||  ||||||| |||| ||  ||||||||||| |||||||||||    | ||    
T  49284 gcggttacacttcccacgatttcgtaaccattggacacacatgtgccattacaacggctctgcatccacccacctctatatataggggactcttaactgt 49383  T
Q  195 ccctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||||||||||||||||| |||| |||||||||||||| |||||    
T  49384 ccctaaggtagaatcta-ctctccctctaaaccctcattctct 49425  T

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Target: scaffold0063; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 237
Target Start/End: Original strand, 36839 - 36978
Alignment:
Q  97 ggttacacttcccacgattttgtaaccgttagagccaggtgtgccattgtaacggctttgcagccctccacctctataaataggggactcaatgcagtcc 196  Q
    ||||||||||||||| |||| ||||||||  ||  || ||||||||||  ||||||| | |||||  ||||||||||| |||||||||||    |||||     
T  36839 ggttacacttcccacaatttcgtaaccgtcggacacacgtgtgccattacaacggctctacagccacccacctctatatataggggactcttaacagtct 36938  T
Q  197 ctaaggtagaatctatctcttcctctaaaccctcactctct 237  Q
    ||||||||||||||| |||| |||||||||||||| |||||    
T  36939 ctaaggtagaatcta-ctctccctctaaaccctcattctct 36978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 9335 - 9247
Alignment:
Q  37 gagactggttcaaatgaaccacaacgtctctatgcacgatcccgcaataaacgccctagcgg-ttacacttcccacgattttgtaaccg 124  Q
    |||||||||||||| |||||||||||||||| |||||| ||| ||||||||| | ||||||| ||||||||||||| |||| |||||||    
T  9335 gagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctagcggtttacacttcccacaatttcgtaaccg 9247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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