View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15837_high_9 (Length: 319)

Name: NF15837_high_9
Description: NF15837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15837_high_9
NF15837_high_9
[»] chr7 (1 HSPs)
chr7 (13-305)||(45900640-45900932)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 13 - 305
Target Start/End: Complemental strand, 45900932 - 45900640
Alignment:
Q  13 gagatgaatcagaaattgatcctttcacattcttgaagtgatttcgacggttaaactgctttggatgttgaaggttgagtctatcaagtatccacagttt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45900932 gagatgaatcagaaattgatcctttcacattcttgaagtgatttcgacagttaaactgctttggatgttgaaggttgagtctatcaagtatccacagttt 45900833  T
Q  113 gaaaccacgaaattttcgacagaaagaagagcttccaacacttgctactgaatgaaagctgcttgatgcaacctgcaacaattaacaaaagaagatcaag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45900832 gaaaccacgaaattttcgacagaaagaagagcttccaacacttgctactgaatgaaagctgcttgatgcaacctgcaacaattaacaaaagaagattaag 45900733  T
Q  213 cgtctggttcgtattagaggctacaaatttctaagggggaacnnnnnnntacggtaatagtgttgaaatttgagcatggatgtgttgatcttg 305  Q
    |||||||||||||||||||||||||||||||||||||| |||       |||||||||| |||||||||||||||||||||||||||||||||    
T  45900732 cgtctggttcgtattagaggctacaaatttctaaggggaaacaaaaaaatacggtaatattgttgaaatttgagcatggatgtgttgatcttg 45900640  T

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