View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15837_low_6 (Length: 361)
Name: NF15837_low_6
Description: NF15837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15837_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 12 - 340
Target Start/End: Complemental strand, 13282934 - 13282606
Alignment:
| Q |
12 |
ataggatcatattgaaaagaaatttgcttgtgcccacccaagattcttctctccctcaagaattttctaagtaggttcctccacctccactttctcttta |
111 |
Q |
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| T |
13282934 |
ataggatcatattgaaaagaaatttgcttgtgcccacccaagattcttctctccctcaagaattttctaagtaggttcctccacctccactttctcttta |
13282835 |
T |
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| Q |
112 |
taggactataatggattttagagtattggaactcatttgggacagggaaacaaggtggagacatgatacaattggagatgtaagagggtctaatttgcac |
211 |
Q |
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| T |
13282834 |
taggactataatggattttagagtattggaactcatttgggacagggaaacaaggtggagacatgatacaattggagatgtaagagggtctaatttgcac |
13282735 |
T |
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| Q |
212 |
ttttttgattgtgagatcttgttccatttgaataatagagtttgagatgttgaacactaggtggnnnnnnnnnnnnnnngaggtgggtatatgcttctct |
311 |
Q |
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| T |
13282734 |
ttttttgattgtgagatcttgttccatttgaataatagagtttgagatgttgaacactaggtggtttttttttgtttttgaggtgggtatatgcttctct |
13282635 |
T |
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| Q |
312 |
atcttgtcaattattttgtttggcaatgt |
340 |
Q |
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| T |
13282634 |
atcttgtcaattatcttgtttggcaatgt |
13282606 |
T |
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