View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15838_low_7 (Length: 292)
Name: NF15838_low_7
Description: NF15838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15838_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 44085968 - 44085700
Alignment:
| Q |
1 |
aagattttttgctggaactcaagaaaaatgtgttggttgcaagaaaacagtgtacccaattgaaaaggtatgttaaataacttaactttattctttagta |
100 |
Q |
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| T |
44085968 |
aagattttttgctggaactcaagaaaaatgtgttggttgcaagaaaacagtgtacccaattgaaaaggtatattatataacttaactatattctttagta |
44085869 |
T |
|
| Q |
101 |
aactttactgattgggaaatgtccctttaaaagtaattttgcctctaaaatgagtaaggttgaatctatccttaaatgttaacatcatggtacactttaa |
200 |
Q |
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| T |
44085868 |
aactttactgattgggaaatgtccctttaaaagtaattttgcctctaaaatgagtaaggttgaatctatccttaaatgttaacatcatggtacactttaa |
44085769 |
T |
|
| Q |
201 |
atgatattaatggtgaatatattcttatttctcactttaaagaacctcttatccttgacatctttattg |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44085768 |
atgatattaatggtgaatatattcttatttctcactttaaagaacctcttatccttgacatctttattg |
44085700 |
T |
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