View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15839_high_13 (Length: 244)
Name: NF15839_high_13
Description: NF15839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15839_high_13 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 225
Target Start/End: Complemental strand, 2115855 - 2115643
Alignment:
| Q |
13 |
agaagaagagaagtttttctcatccacattttagaagttattaatcatatattatactatagttctagatcacatatttccttatgaaatgtaatcatga |
112 |
Q |
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| T |
2115855 |
agaacaagagaagtttttctcatccacattttagaagttattaatcatatattatactatagttctagatcacatatttccttatgaaatgtaatcatga |
2115756 |
T |
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| Q |
113 |
agataaacaaataccatatattttgttatatgatcatcaatgattcaatccatcaaataaggggggaaatcataagaaattaatgtcatacaaaaactcc |
212 |
Q |
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| T |
2115755 |
agataaacaaataccatatattttgttatatgatcatcaatgattcaatccatcaaataaggggggaaatcataagaaattaatgtcatacaaaaactct |
2115656 |
T |
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| Q |
213 |
taataatgccaca |
225 |
Q |
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| T |
2115655 |
taataatgccaca |
2115643 |
T |
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