View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1583_low_19 (Length: 353)

Name: NF1583_low_19
Description: NF1583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1583_low_19
NF1583_low_19
[»] chr2 (39 HSPs)
chr2 (86-349)||(39233928-39234190)
chr2 (224-351)||(18510734-18510861)
chr2 (66-147)||(3834927-3835009)
chr2 (67-147)||(18234191-18234271)
chr2 (235-330)||(14871951-14872046)
chr2 (66-147)||(28784793-28784875)
chr2 (86-147)||(8873686-8873747)
chr2 (86-147)||(27352710-27352771)
chr2 (86-147)||(44075836-44075897)
chr2 (86-147)||(5429050-5429111)
chr2 (86-147)||(16011366-16011427)
chr2 (86-147)||(28783807-28783868)
chr2 (75-147)||(4069609-4069681)
chr2 (70-148)||(39475404-39475483)
chr2 (90-148)||(5429798-5429856)
chr2 (86-147)||(2075674-2075735)
chr2 (86-147)||(2076405-2076466)
chr2 (90-147)||(22387069-22387126)
chr2 (67-143)||(2215018-2215093)
chr2 (235-319)||(14877080-14877164)
chr2 (69-148)||(15994460-15994540)
chr2 (235-351)||(30831813-30831929)
chr2 (86-145)||(914890-914949)
chr2 (66-147)||(26240991-26241073)
chr2 (235-348)||(11965855-11965968)
chr2 (86-147)||(26882735-26882796)
chr2 (235-348)||(37731096-37731209)
chr2 (87-147)||(25456608-25456668)
chr2 (235-330)||(36587367-36587462)
chr2 (281-348)||(37316757-37316824)
chr2 (86-147)||(2238819-2238880)
chr2 (281-338)||(8847559-8847616)
chr2 (86-147)||(20651484-20651545)
chr2 (86-147)||(28916286-28916347)
chr2 (86-147)||(28917102-28917163)
chr2 (86-147)||(35908420-35908481)
chr2 (305-349)||(3838847-3838891)
chr2 (235-351)||(26480986-26481102)
chr2 (95-147)||(35907366-35907418)
[»] chr8 (40 HSPs)
chr8 (223-353)||(4672048-4672178)
chr8 (235-351)||(33451461-33451575)
chr8 (86-147)||(7601706-7601767)
chr8 (235-351)||(25987683-25987799)
chr8 (66-148)||(11596549-11596632)
chr8 (90-145)||(40784809-40784864)
chr8 (86-148)||(30427080-30427142)
chr8 (70-145)||(42093429-42093505)
chr8 (86-145)||(14445251-14445310)
chr8 (232-319)||(28772019-28772106)
chr8 (86-148)||(15224751-15224813)
chr8 (232-349)||(2730854-2730971)
chr8 (86-147)||(41723209-41723270)
chr8 (235-348)||(44090948-44091061)
chr8 (76-147)||(35627036-35627107)
chr8 (235-348)||(1068668-1068781)
chr8 (86-147)||(14446047-14446108)
chr8 (86-147)||(37727102-37727163)
chr8 (86-147)||(39528864-39528925)
chr8 (86-147)||(39529560-39529621)
chr8 (69-147)||(42095028-42095107)
chr8 (66-147)||(5339868-5339950)
chr8 (281-347)||(15716918-15716984)
chr8 (70-147)||(30136099-30136177)
chr8 (66-147)||(30136694-30136776)
chr8 (86-147)||(10499858-10499919)
chr8 (86-147)||(23404254-23404315)
chr8 (86-147)||(23404928-23404989)
chr8 (86-147)||(24700422-24700483)
chr8 (235-348)||(34435633-34435746)
chr8 (305-351)||(45405950-45405996)
chr8 (86-147)||(5340540-5340601)
chr8 (86-147)||(24701124-24701185)
chr8 (86-131)||(26636256-26636301)
chr8 (282-351)||(31249468-31249537)
chr8 (86-147)||(36187179-36187240)
chr8 (282-338)||(5600930-5600986)
chr8 (282-338)||(5639634-5639690)
chr8 (295-351)||(10692497-10692553)
chr8 (86-146)||(13388372-13388432)
[»] chr4 (41 HSPs)
chr4 (235-351)||(2004085-2004201)
chr4 (226-351)||(41262232-41262357)
chr4 (66-147)||(29145212-29145295)
chr4 (66-147)||(29144824-29144907)
chr4 (66-145)||(9170666-9170744)
chr4 (86-145)||(54110480-54110539)
chr4 (86-148)||(39263626-39263688)
chr4 (86-147)||(865416-865477)
chr4 (86-147)||(29517831-29517892)
chr4 (235-351)||(39158164-39158280)
chr4 (86-145)||(866269-866328)
chr4 (232-335)||(51577689-51577792)
chr4 (235-349)||(2738164-2738278)
chr4 (94-147)||(572176-572229)
chr4 (66-147)||(24573729-24573810)
chr4 (66-147)||(44876066-44876147)
chr4 (97-146)||(48614226-48614275)
chr4 (86-147)||(48615217-48615278)
chr4 (86-147)||(53535596-53535657)
chr4 (235-351)||(52204909-52205025)
chr4 (232-335)||(5386447-5386550)
chr4 (86-144)||(42712130-42712189)
chr4 (86-147)||(12658385-12658447)
chr4 (86-148)||(54109498-54109559)
chr4 (86-147)||(6056410-6056471)
chr4 (86-147)||(38657828-38657889)
chr4 (86-147)||(51162909-51162970)
chr4 (86-142)||(11701680-11701736)
chr4 (235-335)||(18316012-18316112)
chr4 (282-338)||(51255818-51255874)
chr4 (281-348)||(29227185-29227252)
chr4 (93-147)||(6711118-6711172)
chr4 (86-148)||(50064669-50064731)
chr4 (86-147)||(15807657-15807718)
chr4 (86-147)||(47864490-47864551)
chr4 (223-335)||(14443273-14443385)
chr4 (232-316)||(19651812-19651896)
chr4 (235-351)||(22813618-22813734)
chr4 (282-338)||(38519865-38519921)
chr4 (86-146)||(38658498-38658558)
chr4 (235-351)||(54000757-54000873)
[»] chr5 (28 HSPs)
chr5 (224-351)||(42446176-42446303)
chr5 (86-147)||(3099086-3099147)
chr5 (66-146)||(3098306-3098386)
chr5 (235-351)||(13089678-13089794)
chr5 (91-147)||(16899910-16899966)
chr5 (86-147)||(40366260-40366321)
chr5 (86-145)||(6895197-6895256)
chr5 (235-338)||(21210890-21210993)
chr5 (86-147)||(19432540-19432601)
chr5 (86-145)||(39084311-39084370)
chr5 (86-147)||(31559033-31559094)
chr5 (86-147)||(38914273-38914334)
chr5 (66-146)||(6894352-6894434)
chr5 (86-145)||(29096830-29096889)
chr5 (235-334)||(31748412-31748511)
chr5 (66-147)||(31558239-31558321)
chr5 (66-147)||(32694748-32694830)
chr5 (86-147)||(3779479-3779540)
chr5 (282-351)||(5168241-5168310)
chr5 (86-147)||(11120210-11120271)
chr5 (281-351)||(611923-611993)
chr5 (281-351)||(17097744-17097814)
chr5 (86-147)||(13911173-13911234)
chr5 (85-130)||(24052407-24052452)
chr5 (86-147)||(26710200-26710261)
chr5 (86-147)||(26979934-26979995)
chr5 (86-131)||(35989579-35989624)
chr5 (281-330)||(39195824-39195873)
[»] chr7 (33 HSPs)
chr7 (222-351)||(33057438-33057567)
chr7 (69-147)||(26828766-26828843)
chr7 (235-349)||(45419957-45420071)
chr7 (232-351)||(13152651-13152771)
chr7 (235-351)||(32777603-32777719)
chr7 (223-351)||(34978355-34978483)
chr7 (66-145)||(14419392-14419473)
chr7 (86-147)||(6822605-6822666)
chr7 (86-147)||(21985575-21985636)
chr7 (94-147)||(41345436-41345489)
chr7 (235-349)||(37352171-37352285)
chr7 (86-148)||(41567920-41567982)
chr7 (86-147)||(11337708-11337769)
chr7 (86-147)||(17995850-17995911)
chr7 (94-147)||(37796598-37796651)
chr7 (86-132)||(21984874-21984920)
chr7 (66-147)||(40193861-40193943)
chr7 (281-351)||(47448885-47448955)
chr7 (86-147)||(789299-789360)
chr7 (282-351)||(12007129-12007198)
chr7 (102-147)||(26829629-26829674)
chr7 (86-147)||(32497001-32497062)
chr7 (86-147)||(42276530-42276591)
chr7 (86-147)||(47723476-47723536)
chr7 (97-145)||(46196746-46196794)
chr7 (86-147)||(7945334-7945395)
chr7 (86-147)||(23966316-23966377)
chr7 (86-147)||(26585475-26585536)
chr7 (86-147)||(28762976-28763037)
chr7 (90-147)||(34458851-34458908)
chr7 (86-147)||(35088374-35088435)
chr7 (66-145)||(16779769-16779849)
chr7 (282-330)||(29723868-29723916)
[»] chr3 (43 HSPs)
chr3 (75-147)||(54280853-54280927)
chr3 (86-147)||(21103601-21103662)
chr3 (235-351)||(34307437-34307553)
chr3 (86-148)||(42121735-42121797)
chr3 (66-145)||(51218107-51218188)
chr3 (235-347)||(31104727-31104839)
chr3 (223-335)||(41443075-41443187)
chr3 (86-146)||(54295093-54295153)
chr3 (88-147)||(43631210-43631269)
chr3 (235-349)||(9692786-9692900)
chr3 (66-147)||(43656191-43656272)
chr3 (86-147)||(15951512-15951573)
chr3 (86-147)||(31090674-31090735)
chr3 (86-147)||(44706911-44706972)
chr3 (86-147)||(44707547-44707608)
chr3 (67-147)||(11058420-11058499)
chr3 (282-338)||(32145929-32145985)
chr3 (232-351)||(34456849-34456968)
chr3 (66-148)||(53427407-53427487)
chr3 (225-298)||(25188310-25188384)
chr3 (66-147)||(42489256-42489338)
chr3 (66-147)||(54281672-54281756)
chr3 (86-147)||(4996371-4996432)
chr3 (86-147)||(4996893-4996954)
chr3 (86-147)||(23485500-23485561)
chr3 (86-147)||(31091329-31091390)
chr3 (86-147)||(41780392-41780453)
chr3 (86-147)||(44878986-44879047)
chr3 (235-335)||(4494133-4494233)
chr3 (70-145)||(34985101-34985177)
chr3 (66-110)||(53841017-53841061)
chr3 (86-145)||(48045639-48045698)
chr3 (282-352)||(5114135-5114205)
chr3 (86-147)||(1984847-1984908)
chr3 (86-131)||(3990842-3990887)
chr3 (86-147)||(8482558-8482619)
chr3 (86-147)||(23143518-23143579)
chr3 (86-147)||(25166743-25166804)
chr3 (281-314)||(39099413-39099446)
chr3 (86-147)||(41354775-41354836)
chr3 (102-147)||(53427978-53428023)
chr3 (86-131)||(54600150-54600195)
chr3 (87-147)||(25165900-25165960)
[»] chr1 (38 HSPs)
chr1 (86-145)||(39841264-39841323)
chr1 (235-351)||(7918958-7919074)
chr1 (67-147)||(30856098-30856178)
chr1 (86-147)||(46047276-46047337)
chr1 (86-147)||(21081040-21081101)
chr1 (66-147)||(46728691-46728774)
chr1 (86-145)||(1743209-1743268)
chr1 (66-129)||(39025394-39025459)
chr1 (86-147)||(171437-171498)
chr1 (66-144)||(29373932-29374012)
chr1 (86-147)||(30856894-30856955)
chr1 (86-147)||(41147275-41147336)
chr1 (86-147)||(51465752-51465813)
chr1 (67-148)||(1743995-1744078)
chr1 (70-147)||(43380516-43380595)
chr1 (66-147)||(51466437-51466521)
chr1 (235-316)||(5771640-5771721)
chr1 (86-147)||(16878746-16878807)
chr1 (86-147)||(19439269-19439330)
chr1 (282-351)||(35529323-35529392)
chr1 (86-147)||(43379770-43379831)
chr1 (239-351)||(48858882-48858994)
chr1 (281-348)||(4857972-4858039)
chr1 (281-348)||(40439782-40439849)
chr1 (284-347)||(50726194-50726257)
chr1 (305-351)||(33100866-33100912)
chr1 (305-351)||(35369758-35369804)
chr1 (86-147)||(21080376-21080437)
chr1 (282-351)||(23645469-23645538)
chr1 (86-147)||(26252804-26252864)
chr1 (86-147)||(37910732-37910793)
chr1 (90-147)||(39840511-39840568)
chr1 (86-147)||(39958001-39958062)
chr1 (86-147)||(39958605-39958666)
chr1 (86-147)||(46727929-46727990)
chr1 (86-147)||(50126444-50126505)
chr1 (84-132)||(23551686-23551734)
chr1 (86-130)||(30984145-30984189)
[»] chr6 (16 HSPs)
chr6 (67-144)||(544343-544422)
chr6 (67-141)||(3184691-3184765)
chr6 (232-351)||(8645367-8645486)
chr6 (86-147)||(1175100-1175161)
chr6 (281-348)||(18065032-18065099)
chr6 (86-147)||(476922-476983)
chr6 (86-147)||(477647-477708)
chr6 (281-349)||(8505716-8505784)
chr6 (282-347)||(8990970-8991035)
chr6 (282-347)||(9015417-9015482)
chr6 (86-131)||(9699153-9699198)
chr6 (86-147)||(24051256-24051317)
chr6 (86-147)||(29979222-29979283)
chr6 (86-147)||(31170213-31170274)
chr6 (86-147)||(32403976-32404037)
chr6 (86-146)||(2812494-2812554)
[»] scaffold0618 (1 HSPs)
scaffold0618 (235-348)||(8849-8962)
[»] scaffold0201 (1 HSPs)
scaffold0201 (235-351)||(8531-8647)
[»] scaffold0785 (1 HSPs)
scaffold0785 (86-148)||(1568-1630)
[»] scaffold0014 (1 HSPs)
scaffold0014 (66-147)||(135484-135566)
[»] scaffold0187 (1 HSPs)
scaffold0187 (86-147)||(28284-28345)
[»] scaffold0141 (2 HSPs)
scaffold0141 (86-147)||(10307-10368)
scaffold0141 (86-131)||(11135-11180)
[»] scaffold0432 (1 HSPs)
scaffold0432 (235-351)||(6416-6532)
[»] scaffold0276 (1 HSPs)
scaffold0276 (239-335)||(1719-1815)
[»] scaffold0184 (1 HSPs)
scaffold0184 (281-345)||(13499-13563)
[»] scaffold0078 (1 HSPs)
scaffold0078 (281-345)||(59281-59345)


Alignment Details
Target: chr2 (Bit Score: 171; Significance: 9e-92; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 86 - 349
Target Start/End: Original strand, 39233928 - 39234190
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagctnnnnnnntaataatatttcagcagcctatcatttatg 185  Q
    ||||||| | |||||||||| |||| || |||||||||||||||||| ||||||||||||||        |||||||||||| |||||||||||||||||    
T  39233928 ttttttatatggacgaaaatcaaaattgaaccaaattacagggacgattatcatatttaagc-caaaaaataataatatttccgcagcctatcatttatg 39234026  T
Q  186 ttatttaaaatatagtattgacaatttgcagtattataaagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataataca 285  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||| |||| | |||||||||    
T  39234027 ttatttaaaatatagtattgacaatttgcagtaatataaagggcattgatatttgaacaacattttcttgtgacaacctattagacaaccaaataataca 39234126  T
Q  286 aagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtga 349  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||    
T  39234127 aagaaatttaggtggtggcacaaaaatcaaaacattggagagaaaaagtagaaggacaatgtga 39234190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 224 - 351
Target Start/End: Complemental strand, 18510861 - 18510734
Alignment:
Q  224 aagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattgg 323  Q
    ||||||| || |||||||||||| ||||||||||||| ||||||| |||| | ||||||||||||||||||||||  ||  ||||||||||||  | | |    
T  18510861 aagggcaatgttatttgaacaacattttcttgtgacaacctattagacaaccaaataatacaaagaaatttaggtaatgacacaaaaatcaaagaagtag 18510762  T
Q  324 agagagaaagtagaaagacaatgtgagt 351  Q
    ||||||||||||||| ||||||||||||    
T  18510761 agagagaaagtagaaggacaatgtgagt 18510734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 3835009 - 3834927
Alignment:
Q  66 cagggatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| |||||| |||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  3835009 cagggatgtatttcaaagtttttttttacagggacgaaaatcaaaactagaccaaattacagggacgattatcatatttaagc 3834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 18234271 - 18234191
Alignment:
Q  67 agggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| |||||||  | |||||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||||||    
T  18234271 agggatgtatttcaattttttttttacagggacgaaaatcaaaactggtccaaattacagagacgaatatcatatttaagc 18234191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 330
Target Start/End: Complemental strand, 14872046 - 14871951
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagaga 330  Q
    ||||||||||||| |||||||| ||| | | ||| |||||| ||| |||||||||||||||||| |||| ||||||||||||||| | ||||||||    
T  14872046 tatttgaacaaccatttcttgtaacaacttgttagacaatcaaattatacaaagaaatttaggtagtggcacaaaaatcaaaacaatagagagaga 14871951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 28784793 - 28784875
Alignment:
Q  66 cagggatgcatttcaaagtatttt-ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| |||| |||||||||||||||| |||||| ||||||||||||| ||||| ||| ||||||||||    
T  28784793 cagggatgtatttcaaagtttttttttacagggacgaaaatcaaaacttgaccaaattacagagacgattataatatttaagc 28784875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 8873747 - 8873686
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||||||||| || |||||||||||||||||  |||||||||||||    
T  8873747 ttttttacagggacgaaaattaaaacgggtccaaattacagggacgaaaatcatatttaagc 8873686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 27352710 - 27352771
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||||||||    
T  27352710 ttttttacagggacgaaaattcaaactggatcaaattatagggacgattatcatatttaagc 27352771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 44075897 - 44075836
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  44075897 ttttttatagagacgaaaatcaaaactggaccaaattacagggacgattatcatatttaagc 44075836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 5429111 - 5429050
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| | | ||||||||||||    
T  5429111 ttttttacagggacgaaaatcaaaactgaaccaaattacagggacaattttcatatttaagc 5429050  T

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Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 16011427 - 16011366
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||||| |||||||| | |||| ||||||||||||||    
T  16011427 ttttttacagggacgaaaatcaaaactggactaaattacaagaacgattatcatatttaagc 16011366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 28783868 - 28783807
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| ||||||||||||||| ||||| |||||||| |||||| ||||||||||||||    
T  28783868 ttttttacatggacgaaaattaaaattggactaaattacatggacgattatcatatttaagc 28783807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 4069681 - 4069609
Alignment:
Q  75 atttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| | |||||||||| |||||||||||||||||  |||||||| |||||| | ||||||||||||||    
T  4069681 atttcaaatttttttttacagagacgaaaattaaaactgacccaaattatagggacaattatcatatttaagc 4069609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 148
Target Start/End: Complemental strand, 39475483 - 39475404
Alignment:
Q  70 gatgcatttcaaagtattttt-tacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    |||| |||||||||| ||||| |||||| |||||||| ||||||||| |||||||||| ||||| ||| |||||||||||    
T  39475483 gatgtatttcaaagtttttttctacaggaacgaaaatcaaaactggatcaaattacagagacgattattatatttaagct 39475404  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 148
Target Start/End: Original strand, 5429798 - 5429856
Alignment:
Q  90 ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    |||| ||||||||||| |||| |||||||||||| |||||||| |||||||||||||||    
T  5429798 ttactgggacgaaaatcaaaattggaccaaattatagggacgattatcatatttaagct 5429856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 2075735 - 2075674
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| |||||||||||| |||||||  | ||||||||||||||| ||||||||||||||    
T  2075735 ttttttatagggacgaaaatcaaaactgacctaaattacagggacgattatcatatttaagc 2075674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 2076405 - 2076466
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||||| ||||||||||||||||| |||||| | ||||||||| ||||    
T  2076405 ttttttacaaggacgaaaatcaaaactggaccaaattatagggacaattatcatattaaagc 2076466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 22387069 - 22387126
Alignment:
Q  90 ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||||||||||||  | |||||||||||||||||  |||||||||||||    
T  22387069 ttacagggacgaaaattaaaacgagtccaaattacagggacgaaaatcatatttaagc 22387126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 2215018 - 2215093
Alignment:
Q  67 agggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatattt 143  Q
    ||||||| |||||||| | |||||| |||| |||||||| |||||||| ||||||||||||||||| ||| ||||||    
T  2215018 agggatgtatttcaaaattttttttgcagg-acgaaaatcaaaactggcccaaattacagggacgattattatattt 2215093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 14877164 - 14877080
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaaca 319  Q
    ||||||||||||| |||||||||||| | | ||| |||| | |||   |||||||||||||||| |||| |||||||||||||||    
T  14877164 tatttgaacaaccatttcttgtgacaacttgttagacaaccaaatttaacaaagaaatttaggtagtggcacaaaaatcaaaaca 14877080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 148
Target Start/End: Original strand, 15994460 - 15994540
Alignment:
Q  69 ggatgcatttcaaagtatttt-ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||| |||||||||| |||| |||||||||||||||| |||||||   ||||||| | |||||| |||||||||||||||    
T  15994460 ggatgtatttcaaagtttttttttacagggacgaaaatcaaaactgactcaaattatatggacgattatcatatttaagct 15994540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 30831929 - 30831813
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||| | ||| |||||||| | | ||| |||||| ||| ||||||||  |||||| | |||| ||||||||||||  | | ||||||||||||    
T  30831929 tatttgaacaatcatttattgtgacaacttcttatacaatcaaattatacaaagggatttagatagtggcacaaaaatcaaagtaatagagagagaaagt 30831830  T
Q  335 agaaagacaatgtgagt 351  Q
    ||||  |||||||||||    
T  30831829 agaagaacaatgtgagt 30831813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 914890 - 914949
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||| ||||| |||||||||||||| | | ||||||||||||||| ||||||||||||    
T  914890 ttttttgcagggtcgaaaattaaaactagccaaaattacagggacgattatcatatttaa 914949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 26240991 - 26241073
Alignment:
Q  66 cagggatgcatttcaaagtatttt-ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| | |||||||| |||| |||||||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  26240991 cagggatgtaattcaaagtttttttttacagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 26241073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 348
Target Start/End: Complemental strand, 11965968 - 11965855
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||  ||||||| | | ||  |||| |  || ||||| |||||||||| | |||| |||||||||||| || | ||||||||||||    
T  11965968 tatttgaacaacctttttatgtgacaacttgttggacaaccacattatacatagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagt 11965869  T
Q  335 agaaagacaatgtg 348  Q
    ||||  ||||||||    
T  11965868 agaagaacaatgtg 11965855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 26882735 - 26882796
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| |  |||||||||| ||||||  |||||||||||||    
T  26882735 ttttttacagggacgaaaatcaaaacggacccaaattacatggacgaaaatcatatttaagc 26882796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 348
Target Start/End: Original strand, 37731096 - 37731209
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||  ||||||| | | ||  |||| |  || |||||||||||||||||| |||| ||||| |||||| || | ||||| ||||||    
T  37731096 tatttgaacaacctttttatgtgacaacttgttgcacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagagagcgaaagt 37731195  T
Q  335 agaaagacaatgtg 348  Q
    ||||  ||||||||    
T  37731196 agaagaacaatgtg 37731209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 147
Target Start/End: Original strand, 25456608 - 25456668
Alignment:
Q  87 tttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||||||| | |||||||| |||| |||||  ||||| ||||||||||||||    
T  25456608 tttttacagggacgaaattgaaaactggtccaagttacactgacgattatcatatttaagc 25456668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 235 - 330
Target Start/End: Original strand, 36587367 - 36587462
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagaga 330  Q
    ||||||||||||| |||||| ||||| ||| ||  ||||   ||| |||||||||||||||| | |||| |||||||||||| || | ||||||||    
T  36587367 tatttgaacaaccatttcttctgacaaccttttggacaactaaattatacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagaga 36587462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 37316757 - 37316824
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtg 348  Q
    |||||||||||||||||| |||  ||||| |||||| || | ||||||||||||||||  ||||||||    
T  37316757 atacaaagaaatttaggtagtgacacaaatatcaaagcaatagagagagaaagtagaagaacaatgtg 37316824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 2238819 - 2238880
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  2238819 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 2238880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 338
Target Start/End: Complemental strand, 8847616 - 8847559
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaa 338  Q
    |||||||||||||||| | |||||| ||| |||||| || | ||||||||||||||||    
T  8847616 atacaaagaaatttagatagtggtataaatatcaaagcaatagagagagaaagtagaa 8847559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 20651545 - 20651484
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||||||   | ||||||||||| | ||||||||||||||    
T  20651545 ttttttacagggacgaaattcaaaactggcttatattacagggactaatatcatatttaagc 20651484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 28916347 - 28916286
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  28916347 ttttttacagggacgaaaatcaaaattcgtccaaattacagggacggtttgcatatttaagc 28916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 28917102 - 28917163
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  28917102 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 28917163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 35908420 - 35908481
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||||| |||||| | |||||||||| |||| | | ||||||||||||    
T  35908420 ttttttacaaggacgaaaatcaaaactcgcccaaattacatggacaaatgtcatatttaagc 35908481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 3838847 - 3838891
Alignment:
Q  305 acaaaaatcaaaacattggagagagaaagtagaaagacaatgtga 349  Q
    ||||||||||||||| | ||||||||||||| ||||| |||||||    
T  3838847 acaaaaatcaaaacaatagagagagaaagtaaaaagataatgtga 3838891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 26480986 - 26481102
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| ||| |||||||| | | ||| |||| | ||| ||||||||  |||||| | |||  ||||||||||||  | | |||| |||||||    
T  26480986 tatttgaacaaccctttattgtgacaacttcttatacaaccaaattatacaaagggatttagatagtgacacaaaaatcaaagtaatagagaaagaaagt 26481085  T
Q  335 agaaagacaatgtgagt 351  Q
    ||||| |||| ||||||    
T  26481086 agaaaaacaacgtgagt 26481102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 35907418 - 35907366
Alignment:
Q  95 gggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| |||||| |||||| ||||||||||||||||| | ||||||||| ||||    
T  35907418 gggatgaaaatcaaaactagaccaaattacagggacaattatcatattgaagc 35907366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 223 - 353
Target Start/End: Complemental strand, 4672178 - 4672048
Alignment:
Q  223 aaagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattg 322  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||||||||    
T  4672178 aaagggcattgatatttgaacaactttttcttgtgacaccctattagacaaccaaataatacaaagaaatttaggcggtggtacaaaaatcaaaacattg 4672079  T
Q  323 gagagagaaagtagaaagacaatgtgagtga 353  Q
    |||||||||||||||| ||||||||||||||    
T  4672078 gagagagaaagtagaaggacaatgtgagtga 4672048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 33451461 - 33451575
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||||||||| | | ||| |||||| ||| ||||||||||| |||||| |||| |||||||||||| || | ||||||||||||    
T  33451461 tatttgaacaaccctttcttgtgacaacttgttagacaatcaaattatacaaagaaa-ttaggtagtggcacaaaaatcaaagcaatagagagagaaagt 33451559  T
Q  335 agaaagacaatgtgagt 351  Q
    || ||||||||||||||    
T  33451560 ag-aagacaatgtgagt 33451575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 7601706 - 7601767
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  7601706 ttttttacagggacgaaaatcaaaactggcccaaattacagggacgattatcatatttaagc 7601767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 25987683 - 25987799
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||||||||| ||| || |||||   ||| |||||||||||||||||| |||  |||||||||||| || | |||||| |||||    
T  25987683 tatttgaacaaccatttcttgtgacaaccttttgaacaactaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagt 25987782  T
Q  335 agaaagacaatgtgagt 351  Q
    |||| || |||||||||    
T  25987783 agaatgataatgtgagt 25987799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 148
Target Start/End: Original strand, 11596549 - 11596632
Alignment:
Q  66 cagggatgcatttcaaagtatttt-ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    |||||||| |||||||||| |||| |||||||||||||||| |||||||| ||||||||| ||||||| | |||||||||||||    
T  11596549 cagggatgtatttcaaagtttttttttacagggacgaaaatcaaaactggtccaaattactgggacgattctcatatttaagct 11596632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 40784864 - 40784809
Alignment:
Q  90 ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  40784864 ttacagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaa 40784809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 30427142 - 30427080
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  30427142 ttttttacaaggacgaaaataaaaactgaaccaaattacagggacgattatcatatttaagct 30427080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 42093505 - 42093429
Alignment:
Q  70 gatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||| |||||||||| |||||| |||||||||||||| ||||||||  |||||||||||||||| ||||||||||||    
T  42093505 gatgtatttcaaagtttttttttacagggacgaaaatcaaaactggttcaaattacagggacgattatcatatttaa 42093429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 14445310 - 14445251
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    ||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||||||    
T  14445310 ttttttacagggacgaaaattaaaacttgaccaaattacaaagacgattatcatatttaa 14445251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 319
Target Start/End: Original strand, 28772019 - 28772106
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaaca 319  Q
    |||||||||||||||| |||||||||||| ||| ||  ||||   ||| |||||||||||||||||| |||| |||||||||||||||    
T  28772019 tgatatttgaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaaca 28772106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 15224813 - 15224751
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||  ||||||||||||||    
T  15224813 ttttttacagggacgaaaatcaaaacgggcccaaattacagggacgaaaatcatatttaagct 15224751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 349
Target Start/End: Original strand, 2730854 - 2730971
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaa 331  Q
    |||||||||||||||  |||||||||||| ||| || || ||   ||| ||||||| |||||||| | |||| |||||||||||| || | |||||||||    
T  2730854 tgatatttgaacaacaatttcttgtgacaaccttttgaataactaaattatacaaataaatttagatagtggcacaaaaatcaaagcagttgagagagaa 2730953  T
Q  332 agtagaaagacaatgtga 349  Q
    |||| ||||| |||||||    
T  2730954 agtaaaaagataatgtga 2730971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 41723270 - 41723209
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| ||||||| |||| |||||| ||||||||||||||||||| ||||||||||||||    
T  41723270 ttttttatagggacggaaatcaaaacttgaccaaattacagggacgattatcatatttaagc 41723209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 348
Target Start/End: Complemental strand, 44091061 - 44090948
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||| ||||||| | | ||  |||| |  || |||||||||||||||||| |||  |||||||||||| || | ||||||||||||    
T  44091061 tatttgaacaaccttttcatgtgacaactttttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagagaaagt 44090962  T
Q  335 agaaagacaatgtg 348  Q
    ||||  ||||||||    
T  44090961 agaagaacaatgtg 44090948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 35627036 - 35627107
Alignment:
Q  76 tttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| ||||||||||| |||||||| |||||||  |||||||||||||||||  ||||| |||||||    
T  35627036 tttcaaagttttttttacaggaacgaaaatcaaaactgatccaaattacagggacgaaaatcatgtttaagc 35627107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 348
Target Start/End: Complemental strand, 1068781 - 1068668
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||  ||||||| | | ||  |||| |  || |||||||||||||||||| ||| |||||| |||||| || | ||||||||||||    
T  1068781 tatttgaacaacctttttatgtgacaacttgttggacaaccacattatacaaagaaatttaggtagtgttacaaatatcaaagcaatagagagagaaagt 1068682  T
Q  335 agaaagacaatgtg 348  Q
    ||||  ||||||||    
T  1068681 agaagaacaatgtg 1068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 14446047 - 14446108
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||| |||||| |||| ||| ||||||||||||||||| ||||||||||||||    
T  14446047 ttttttacggggatgaaaatcaaaattggcccaaattacagggacgattatcatatttaagc 14446108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 37727163 - 37727102
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||| | |||||||| ||||||  |||||||||||||    
T  37727163 ttttttacagggacgaaaatcaaaactggtctaaattacatggacgaaaatcatatttaagc 37727102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 39528925 - 39528864
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||| ||||| |||||||  |||||||||||||||||  |||||||||||||    
T  39528925 ttttttacagggacaaaaatcaaaactgacccaaattacagggacgaaaatcatatttaagc 39528864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 39529560 - 39529621
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||  ||||||||||||||| |  |||||||||||||    
T  39529560 ttttttacagggacgaaaatcaaaactgatccaaattacagggacaaaaatcatatttaagc 39529621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 147
Target Start/End: Original strand, 42095028 - 42095107
Alignment:
Q  69 ggatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||| |||||||||| |||||| | || |||||||||||||||| || |||||||||| ||||| ||| ||||||||||    
T  42095028 ggatgtatttcaaagtttttttttatagagacgaaaattaaaactagatcaaattacagagacgattattatatttaagc 42095107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 5339950 - 5339868
Alignment:
Q  66 cagggatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| | |||||||| |||||| |||||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  5339950 cagggatgtaattcaaagtttttttttacagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 5339868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 347
Target Start/End: Original strand, 15716918 - 15716984
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgt 347  Q
    |||||||||||||||||| ||| |||||| |||||| || | ||||||||||||||||  |||||||    
T  15716918 atacaaagaaatttaggtagtgatacaaatatcaaagcaatagagagagaaagtagaagaacaatgt 15716984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 147
Target Start/End: Complemental strand, 30136177 - 30136099
Alignment:
Q  70 gatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| |||||||||| |||||| |||||||||||||| | || | || |||||||||| ||||| ||||||||||||||    
T  30136177 gatgtatttcaaagtttttttttacagggacgaaaatcataatttgatcaaattacagagacgattatcatatttaagc 30136099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 30136694 - 30136776
Alignment:
Q  66 cagggatgcatttcaaagtatttt-ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| |||| |||||||||  ||||| |||| |||  ||||||||| |||||| ||||||||||||||    
T  30136694 cagggatgtatttcaaagtttttttttacagggataaaaatcaaaattggttcaaattacatggacgattatcatatttaagc 30136776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 10499919 - 10499858
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  10499919 ttttttacagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 10499858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 23404315 - 23404254
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||| |||||| ||||  || |||||||||||||||||  |||||||||||||    
T  23404315 ttttttacagggaggaaaatgaaaatgggtccaaattacagggacgaaaatcatatttaagc 23404254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 23404928 - 23404989
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||| |||||||| ||||| || | |||||||||||||||  |||||||||||||    
T  23404928 ttttttacaggaacgaaaatcaaaacgggccaaaattacagggacgaaaatcatatttaagc 23404989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 24700483 - 24700422
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  24700483 ttttttacagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 24700422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 348
Target Start/End: Original strand, 34435633 - 34435746
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||  ||||||| | | ||  |||| |  || |||||||||||||||||| |||| ||||| |||||| || | ||||| ||||||    
T  34435633 tatttgaacaacctttttatgtgacaacttgttgcacaaccacattatacaaagaaatttaggtagtggcacaaatatcaaagcaatagagagcgaaagt 34435732  T
Q  335 agaaagacaatgtg 348  Q
    ||||  ||||||||    
T  34435733 agaagaacaatgtg 34435746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 351
Target Start/End: Original strand, 45405950 - 45405996
Alignment:
Q  305 acaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||||||||||| | |||||||||||||||| | ||||||||||    
T  45405950 acaaaaatcaaaacaatagagagagaaagtagaagggcaatgtgagt 45405996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 5340540 - 5340601
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||||| ||||| || |||||||||||| ||||  || ||||||||||    
T  5340540 ttttttacaaggacgaaaatcaaaacgggcccaaattacaggaacgaaaatgatatttaagc 5340601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 24701124 - 24701185
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||||| ||||| |  |||||||||||||||||  || ||||||||||    
T  24701124 ttttttacaaggacgaaaatcaaaacggacccaaattacagggacgaaaatgatatttaagc 24701185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 26636256 - 26636301
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacg 131  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||    
T  26636256 ttttttacagggacgaaaatcaaaattagcccaaattacagggacg 26636301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 31249468 - 31249537
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||| || | |||| |||||||||||| |||| || | ||||||||||||| ||||| |||||||||    
T  31249468 tacaaaggaaatgaggtagtggtacaaaaaccaaagcaatagagagagaaagtaaaaagataatgtgagt 31249537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 36187179 - 36187240
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| ||||| |||||| |||||||  | |||||||||||||||  |||||||||||||    
T  36187179 ttttttatagggatgaaaatcaaaactgatctaaattacagggacgaaaatcatatttaagc 36187240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 5600930 - 5600986
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaa 338  Q
    ||||||||||||||| |||||  |||||||||||| || |  |||||||||||||||    
T  5600930 tacaaagaaatttagatggtgacacaaaaatcaaagcaataaagagagaaagtagaa 5600986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 5639690 - 5639634
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaa 338  Q
    ||||||||||||||| |||||  |||||||||||| || |  |||||||||||||||    
T  5639690 tacaaagaaatttagatggtgacacaaaaatcaaagcaataaagagagaaagtagaa 5639634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 351
Target Start/End: Complemental strand, 10692553 - 10692497
Alignment:
Q  295 aggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    |||| |||| ||||||| ||||||| | ||||||||||||| ||||| |||||||||    
T  10692553 aggtagtggcacaaaaaccaaaacaatagagagagaaagtaaaaagataatgtgagt 10692497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 13388432 - 13388372
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaag 146  Q
    |||||||||||||||||| | ||||| |  ||||||||||| ||| | |||||||||||||    
T  13388432 ttttttacagggacgaaattcaaaaccgacccaaattacagagactaatatcatatttaag 13388372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 2004085 - 2004201
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||||||||| | ||||||| |||||| ||||||| |||||||||||||| ||| ||||||||||||| || || |||||||||||    
T  2004085 tatttgaacaaccttttcttgtgataacctattagacaatcaaataatataaagaaatttaggtagtgatacaaaaatcaaagcaatgtagagagaaagt 2004184  T
Q  335 agaaagacaatgtgagt 351  Q
    |||| | ||||||||||    
T  2004185 agaagggcaatgtgagt 2004201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 226 - 351
Target Start/End: Original strand, 41262232 - 41262357
Alignment:
Q  226 gggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggag 325  Q
    ||||| || |||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||| |  ||| |||||||||||| || | |||    
T  41262232 gggcaatgttatttgaacaaccttttcttgtgacaacctattagacaaccaaataatacaaagaaatttagataatggcacaaaaatcaaagcaatagag 41262331  T
Q  326 agagaaagtagaaagacaatgtgagt 351  Q
    | ||||||||||| ||||||||||||    
T  41262332 aaagaaagtagaaggacaatgtgagt 41262357  T

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Target: chr4; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 29145212 - 29145295
Alignment:
Q  66 cagggatgcatttcaaagtatttttt--acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| ||||||  |||||||||||||| |||| | ||||||||||||||||||| ||||||||||||||    
T  29145212 cagggatgtatttcaaagtttttttttcacagggacgaaaatcaaaatttgaccaaattacagggacgattatcatatttaagc 29145295  T

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Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 29144824 - 29144907
Alignment:
Q  66 cagggatgcatttcaaagtatttttt--acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| ||||||  |||||||||||||| |||| | || |||||||||||||||| ||||||||||||||    
T  29144824 cagggatgtatttcaaagtttttttttcacagggacgaaaatcaaaatttgatcaaattacagggacgattatcatatttaagc 29144907  T

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Target: chr4; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 9170666 - 9170744
Alignment:
Q  66 cagggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||| ||| |||||||||| |||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||    
T  9170666 caggaatgtatttcaaagt-ttttttacagggacgaaaatcaaaactggaccaaaatacaagaacgattatcatatttaa 9170744  T

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Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 54110480 - 54110539
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||||||||||||||| ||||||| | |||||||||||||||| ||||||||||||    
T  54110480 ttttttacagggacgaaaatcaaaactgaaacaaattacagggacgattatcatatttaa 54110539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 39263688 - 39263626
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||||||||| |||||||| |||||||| |||||||||||||||||  ||||||||||||||    
T  39263688 ttttttacaggaacgaaaatcaaaactggtccaaattacagggacgaaaatcatatttaagct 39263626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 865477 - 865416
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||  |||||||||||||| || ||||||||||||||    
T  865477 ttttttacagggacgaaaatcaaaactgacccaaattacagggatgattatcatatttaagc 865416  T

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Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 29517831 - 29517892
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| || |||||||||||||||||| ||||||||| ||||    
T  29517831 ttttttacagggacgaaaatcaaaattgaaccaaattacagggacgattatcatattaaagc 29517892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 39158280 - 39158164
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| ||| |||||||| | ||||  |||| | ||| |||||||||||||||||| | || ||||||| ||||||| | || |||||||||    
T  39158280 tatttgaacaaccatttattgtgacaacttattggacaaccaaattatacaaagaaatttaggtagcggcacaaaaaccaaaacaatagaaagagaaagt 39158181  T
Q  335 agaaagacaatgtgagt 351  Q
    ||||  | |||||||||    
T  39158180 agaagaataatgtgagt 39158164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 866269 - 866328
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    ||||||||| |||||||||| |||||| ||| ||||||||||||||| ||||||||||||    
T  866269 ttttttacaaggacgaaaatcaaaactagactaaattacagggacgattatcatatttaa 866328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 51577792 - 51577689
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaa 331  Q
    ||||||||||| |||| |||||||||||| ||| ||  ||||   ||| ||| |||||||||||||| |||| |||||||||||| || | |||||||||    
T  51577792 tgatatttgaataaccatttcttgtgacaaccttttggacaactaaattatataaagaaatttaggtagtggcacaaaaatcaaagcaatagagagagaa 51577693  T
Q  332 agta 335  Q
    ||||    
T  51577692 agta 51577689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 2738164 - 2738278
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||| ||||| | |||||||||||| ||| ||  |||||  ||| |||||||||| ||||||| |||| |||| |||||||  | | ||||||||||||    
T  2738164 tatttaaacaatcatttcttgtgacaaccttttggacaattaaattatacaaagaattttaggttgtggcacaacaatcaaagaaatagagagagaaagt 2738263  T
Q  335 agaaagacaatgtga 349  Q
    ||||||| |||||||    
T  2738264 agaaagataatgtga 2738278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 572176 - 572229
Alignment:
Q  94 agggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||| ||||||||||||||||| |||||| | ||||||||||||||    
T  572176 agggacgaaaatcaaaactggaccaaattatagggacaattatcatatttaagc 572229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 24573810 - 24573729
Alignment:
Q  66 cagggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||  | ||||||||| | |||||||| |||||||||||||||||||| |||   ||||||||||||||    
T  24573810 cagggatgtatttcaattttttttttacacgtacgaaaatcaaaactggaccaaattacagagacagttatcatatttaagc 24573729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 44876147 - 44876066
Alignment:
Q  66 cagggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| ||||||||||| |||||||  |||||||  |||||||||| | || | ||||||||||||||    
T  44876147 cagggatgtatttcaaagttttttttacaggaacgaaaagcaaaactgacccaaattacaagaacaattatcatatttaagc 44876066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 48614275 - 48614226
Alignment:
Q  97 gacgaaaattaaaactggaccaaattacagggacgactatcatatttaag 146  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  48614275 gacgaaaattaaaactggaccaatttacacggacgattatcatatttaag 48614226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 48615217 - 48615278
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||| |||||| |||||| | |||||||||| |||||| ||||||||||||||    
T  48615217 ttttttacagggatgaaaatcaaaactcgtccaaattacatggacgaatatcatatttaagc 48615278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 53535596 - 53535657
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||  || ||||||||||    
T  53535596 ttttttacagggacgaaaatcaaaacgggcccaaattacagggacgaaaatgatatttaagc 53535657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 52205025 - 52204909
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||| |||||||| ||| | | | ||  |||| | ||| ||| ||||||||||| || |||  |||||||||||| || | ||||||||||||    
T  52205025 tatttgaacaatcttttcttatgataacttgttggacaaccaaattataaaaagaaatttaagtagtgacacaaaaatcaaagcaatagagagagaaagt 52204926  T
Q  335 agaaagacaatgtgagt 351  Q
    ||||| |||||||||||    
T  52204925 agaaaaacaatgtgagt 52204909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 335
Target Start/End: Complemental strand, 5386550 - 5386447
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaa 331  Q
    |||||||||||||||| |||||||||||| | | ||| ||||   ||| |||||||||||||||| | ||   |||||||||||| || | |||||||||    
T  5386550 tgatatttgaacaaccatttcttgtgacaactttttagacaactaaattatacaaagaaatttagatagtaacacaaaaatcaaagcaatagagagagaa 5386451  T
Q  332 agta 335  Q
    ||||    
T  5386450 agta 5386447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 42712130 - 42712189
Alignment:
Q  86 ttttttac-agggacgaaaattaaaactggaccaaattacagggacgactatcatattta 144  Q
    |||||||| |||||| ||||| |||||||| |||||||||| ||||||||||||||||||    
T  42712130 ttttttactagggacaaaaatcaaaactggtccaaattacaaggacgactatcatattta 42712189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 12658447 - 12658385
Alignment:
Q  86 ttttttacagggacgaaaattaaaac-tggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||  ||| |||||||||| |||||| ||||||||||||||    
T  12658447 ttttttacagggacgaaaataaaaaaatggcccaaattacatggacgattatcatatttaagc 12658385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 54109559 - 54109498
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||||||||||  |||||| |||||||||  ||||||||||||||| |||||||||||||||    
T  54109559 ttttttacagggt-gaaaatcaaaactggagtaaattacagggacgattatcatatttaagct 54109498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 6056471 - 6056410
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||| ||||||||| |||||||  | |||||| |||||||| ||||||||||||||    
T  6056471 ttttttacagtgacgaaaatcaaaactgccctaaattatagggacgattatcatatttaagc 6056410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 38657889 - 38657828
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||    |||||||||||||||||  |||||||||||||    
T  38657889 ttttttacagggacgaaaatcaaaacgaacccaaattacagggacgaaaatcatatttaagc 38657828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 51162909 - 51162970
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| |  |||||||||| ||||||  |||||||||||||    
T  51162909 ttttttacagggacgaaaatcaaaacggacccaaattacaaggacgaaaatcatatttaagc 51162970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 11701680 - 11701736
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatt 142  Q
    |||| |||| |||||||||| |||||||| ||||||||||||||||| ||| |||||    
T  11701680 ttttctacatggacgaaaatcaaaactggtccaaattacagggacgattataatatt 11701736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Complemental strand, 18316112 - 18316012
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||| ||||| | | ||  |||| | ||| |||||||||||||||||| |||  |||||||||||| || | || |||||||||    
T  18316112 tatttgaacaaccatttcttatgacaacttgttggacaaccaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagagaaagt 18316013  T
Q  335 a 335  Q
    |    
T  18316012 a 18316012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 51255874 - 51255818
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaa 338  Q
    ||||||||||||||| | |||| |||||||||||| || | ||||||||||||||||    
T  51255874 tacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagtagaa 51255818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 29227185 - 29227252
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtg 348  Q
    |||||||||||||||||| |||  ||||| |||||| || | ||||||||||||||||  ||||||||    
T  29227185 atacaaagaaatttaggtagtgacacaaatatcaaagcaatagagagagaaagtagaagaacaatgtg 29227252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 147
Target Start/End: Original strand, 6711118 - 6711172
Alignment:
Q  93 cagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||| | |||||||| ||||||||||||||| |  |||||||||||||    
T  6711118 cagggacgaaattcaaaactggtccaaattacagggacaaaaatcatatttaagc 6711172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 50064669 - 50064731
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||||||| |||||||||| |||||  | ||||||||||||||||| |  ||||||||||||    
T  50064669 ttttttacaaggacgaaaatcaaaacgcgcccaaattacagggacgaattgcatatttaagct 50064731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 15807718 - 15807657
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  15807718 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 15807657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 47864551 - 47864490
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  47864551 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 47864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 335
Target Start/End: Complemental strand, 14443385 - 14443273
Alignment:
Q  223 aaagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattg 322  Q
    |||| ||| |||||||||||||||| ||| |||||||| ||| ||  ||||   ||| |||||||| ||||||||| ||||   |||||| ||| || |     
T  14443385 aaagagcaatgatatttgaacaaccattttttgtgacaaccttttggacaactaaattatacaaaggaatttaggtagtggcgtaaaaattaaagcaata 14443286  T
Q  323 gagagagaaagta 335  Q
    |||||||||||||    
T  14443285 gagagagaaagta 14443273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 316
Target Start/End: Original strand, 19651812 - 19651896
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaa 316  Q
    |||||||||||||||| ||| |||||||| ||| ||  ||||   ||| |||||||||||||||||| |||  | ||||||||||    
T  19651812 tgatatttgaacaaccattttttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtgacataaaaatcaaa 19651896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 22813618 - 22813734
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||| |||||| ||||||||||||| | | ||  |||||  ||| ||| |||||||||||||| |||  |||||||||||| || | || ||| |||||    
T  22813618 tatttaaacaactttttcttgtgacaacttgttggacaattaaattatataaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagaaaaagt 22813717  T
Q  335 agaaagacaatgtgagt 351  Q
    | || |||||| |||||    
T  22813718 aaaatgacaatatgagt 22813734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 38519921 - 38519865
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaa 338  Q
    ||||||||||||||  | |||| |||||||||||| || | ||||||||||||||||    
T  38519921 tacaaagaaatttaaatagtggcacaaaaatcaaagcaatagagagagaaagtagaa 38519865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 38658498 - 38658558
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaag 146  Q
    ||||||||| |||||||| | ||||| |  ||||||||||||||| | |||||||||||||    
T  38658498 ttttttacaaggacgaaattcaaaaccgatccaaattacagggactaatatcatatttaag 38658558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 54000873 - 54000757
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||  ||| |||||||| ||| ||  ||||   ||| |||||||||||||||||| |||| ||| ||||  || || | ||||||||||||    
T  54000873 tatttgaacaactatttattgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacacaaatttaagcaatagagagagaaagt 54000774  T
Q  335 agaaagacaatgtgagt 351  Q
    | || || |||||||||    
T  54000773 aaaatgataatgtgagt 54000757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 224 - 351
Target Start/End: Original strand, 42446176 - 42446303
Alignment:
Q  224 aagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattgg 323  Q
    ||||||| || |||||||||||| ||||||||||||| ||||||| |||| | ||||||||||||||||||||||  ||| |||||||||||| || | |    
T  42446176 aagggcaatgttatttgaacaacattttcttgtgacaacctattagacaaccaaataatacaaagaaatttaggtaatggcacaaaaatcaaagcaatag 42446275  T
Q  324 agagagaaagtagaaagacaatgtgagt 351  Q
    ||||| ||||||||| ||||||||||||    
T  42446276 agagaaaaagtagaaggacaatgtgagt 42446303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 3099086 - 3099147
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  3099086 ttttttacagggacgaaaattaaaactggaccaaattacatggacgattatcatatttaagc 3099147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 3098386 - 3098306
Alignment:
Q  66 cagggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaag 146  Q
    |||||||| |||||||||| |||||||||| ||||||||| |||||||  | ||||||||||||||| |||||||||||||    
T  3098386 cagggatgtatttcaaagttttttttacagagacgaaaatcaaaactgacctaaattacagggacgattatcatatttaag 3098306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 13089678 - 13089794
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||| ||||| ||| || ||||||  ||| |||||||||||||||||| |||  |||||||||||| || | |||||| |||||    
T  13089678 tatttgaacaaccatttcttatgacaaccttttgaacaattaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagataaagt 13089777  T
Q  335 agaaagacaatgtgagt 351  Q
    |||| || |||||||||    
T  13089778 agaatgataatgtgagt 13089794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 16899966 - 16899910
Alignment:
Q  91 tacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  16899966 tacagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaagc 16899910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 40366321 - 40366260
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||  ||||||||||||||||| ||||||||||||||    
T  40366321 ttttttacagggacgaaaatcaaaactgacccaaattacagggacgattatcatatttaagc 40366260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 6895197 - 6895256
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  6895197 ttttttactgggacgaaaatcaaaactggaccaaattacaaggacgattatcatatttaa 6895256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 235 - 338
Target Start/End: Complemental strand, 21210993 - 21210890
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||  ||||||| | |||| ||||| |  || |||||||||||||||||| || |||||||||| ||| || | ||||||||||||    
T  21210993 tatttgaacaacctttttatgtgacaacttattgaacaaccacattatacaaagaaatttaggtagtagtacaaaaattaaagcaatagagagagaaagt 21210894  T
Q  335 agaa 338  Q
    ||||    
T  21210893 agaa 21210890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 19432540 - 19432601
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||| ||||| ||||||| ||||||||||||| |||| ||||||||||||||    
T  19432540 ttttttacagggacaaaaatcaaaactgaaccaaattacaggaacgattatcatatttaagc 19432601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 39084311 - 39084370
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||||||||||||||| |||| ||| |||||||| |||||||| ||||||||||||    
T  39084311 ttttttacagggacgaaaatcaaaattggcccaaattagagggacgattatcatatttaa 39084370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 31559033 - 31559094
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| |||||||||||| |||||||| | ||||||||| ||||| ||||||||||||||    
T  31559033 ttttttatagggacgaaaatcaaaactggccaaaattacagtgacgattatcatatttaagc 31559094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 38914273 - 38914334
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||| | |||||| ||||||||  |||||||||||||    
T  38914273 ttttttacagggacgaaaatcaaaactggtctaaattatagggacgaaaatcatatttaagc 38914334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 6894434 - 6894352
Alignment:
Q  66 cagggatgcatttcaaagtatttttt--acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaag 146  Q
    |||||||| |||||||||| |||||   |||||||||||||| |||||||| | |||||| ||||| || |||||||||||||    
T  6894434 cagggatgtatttcaaagtttttttataacagggacgaaaatcaaaactggcctaaattagagggatgattatcatatttaag 6894352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 29096889 - 29096830
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    ||||||||||| || ||||| ||||||||||||||||||| |||||| | ||||||||||    
T  29096889 ttttttacaggaacaaaaatcaaaactggaccaaattacatggacgattttcatatttaa 29096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 334
Target Start/End: Complemental strand, 31748511 - 31748412
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||| | ||| |||||||| | ||||  |||||| ||| |||||||||||||||||| || | |||||||||||| || | || |||||||||    
T  31748511 tatttgaacaatcattttttgtgacaacttattggacaatcaaattatacaaagaaatttaggttgtagcacaaaaatcaaagcaatagatagagaaagt 31748412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 31558321 - 31558239
Alignment:
Q  66 cagggatgcatttcaaagtattt-tttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||  ||||||||| ||| |||||| |||||||||| |||||||   |||||||||| ||||| ||||||||||||||    
T  31558321 cagggatgtgtttcaaagtttttgtttacatggacgaaaatcaaaactgactcaaattacagtgacgattatcatatttaagc 31558239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 32694748 - 32694830
Alignment:
Q  66 cagggatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| ||||||| || |||||| | || ||||||||| |||||||| ||||| ||||||| ||| ||||||||||||||    
T  32694748 cagggatgtatttcaatgtttttttttaaagagacgaaaatcaaaactggcccaaactacaggggcgattatcatatttaagc 32694830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 3779479 - 3779540
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | || ||||||||  |||||| ||||||||||||||    
T  3779479 ttttttacagggacgaaaatcaaaatttgatcaaattactaggacgattatcatatttaagc 3779540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 351
Target Start/End: Complemental strand, 5168310 - 5168241
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    |||||||||| | |||| |||| |||||||||||| || | ||||||||||||| ||||| |||||||||    
T  5168310 tacaaagaaaatgaggtagtggcacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagt 5168241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 11120271 - 11120210
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || ||||||||||| || ||  |||||||||||||    
T  11120271 ttttttacagggacgaaaatcaaaacgggcccaaattacagagatgaaaatcatatttaagc 11120210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 611993 - 611923
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    |||||||||||||||||| |||  |||||||||||| || | |||||||||| || || || |||||||||    
T  611993 atacaaagaaatttaggtagtgacacaaaaatcaaagcagtagagagagaaaataaaatgataatgtgagt 611923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 17097744 - 17097814
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||||||| |||||| |||  ||||||||||||  | | || ||||||||||||| ||||||||||||    
T  17097744 atacaaagaaaattaggtagtgacacaaaaatcaaagtaatagaaagagaaagtagaatgacaatgtgagt 17097814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 13911234 - 13911173
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  |||||||||| |||| | ||||||||||||||    
T  13911234 ttttttacagggacgaaattcaaaaccgacccaaattacatggactaatatcatatttaagc 13911173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 24052407 - 24052452
Alignment:
Q  85 attttttacagggacgaaaattaaaactggaccaaattacagggac 130  Q
    ||||||||||||||||||||| |||||  | |||||||||||||||    
T  24052407 attttttacagggacgaaaatcaaaacgcgtccaaattacagggac 24052452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 26710261 - 26710200
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || ||||||||| |||| ||  || ||||||||||    
T  26710261 ttttttacagggacgaaaatcaaaacgggcccaaattactgggatgaaaatgatatttaagc 26710200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 26979995 - 26979934
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || ||||||||| |||| ||  || ||||||||||    
T  26979995 ttttttacagggacgaaaatcaaaacgggcccaaattactgggatgaaaatgatatttaagc 26979934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 35989579 - 35989624
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacg 131  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||    
T  35989579 ttttttacagggacgaaaatcaaaattagcccaaattacagggacg 35989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 39195873 - 39195824
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagaga 330  Q
    |||||||||||||||||| ||| ||||||||||||| || | ||||||||    
T  39195873 atacaaagaaatttaggtagtgatacaaaaatcaaagcaatagagagaga 39195824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 222 - 351
Target Start/End: Complemental strand, 33057567 - 33057438
Alignment:
Q  222 taaagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacatt 321  Q
    ||||||||| || ||||||||||| |||||||||||||| ||||||| |||| | ||||||||||||||||||||||  |   |||||||||||| || |    
T  33057567 taaagggcaatgttatttgaacaatcttttcttgtgacaacctattagacaaccaaataatacaaagaaatttaggtaataacacaaaaatcaaagcaat 33057468  T
Q  322 ggagagagaaagtagaaagacaatgtgagt 351  Q
     |||||||||||||| |||||||| |||||    
T  33057467 agagagagaaagtaggaagacaatatgagt 33057438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 147
Target Start/End: Complemental strand, 26828843 - 26828766
Alignment:
Q  69 ggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||| |||||||| | ||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||    
T  26828843 ggatgtatttcaaatt-ttttttacagggaagaaaatcaaaactggaccaaattacagggacaattatcatatttaagc 26828766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 235 - 349
Target Start/End: Original strand, 45419957 - 45420071
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||| ||||| ||| ||  ||||   ||| |||||||||||||||||| |||| ||||||||||||||| | ||||||||||||    
T  45419957 tatttgaacaaccatttcttttgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaacaatagagagagaaagt 45420056  T
Q  335 agaaagacaatgtga 349  Q
    | || || |||||||    
T  45420057 aaaatgataatgtga 45420071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 351
Target Start/End: Complemental strand, 13152771 - 13152651
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaa-cattggagagaga 330  Q
    |||||||||||||||| |||||| ||||| ||| ||  ||||   ||| |||||||||||||||||| |||| ||||||||||||| || | ||||||||    
T  13152771 tgatatttgaacaaccatttcttatgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaatcaaaagcaatagagagaga 13152672  T
Q  331 aagtagaaagacaatgtgagt 351  Q
    ||||| || || |||||||||    
T  13152671 aagtaaaaggataatgtgagt 13152651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 32777603 - 32777719
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||| |||||||||| | | | | ||  |||| | ||| |||||||||||||||||| |||| ||||||||||||  | ||||||||||||||    
T  32777603 tatttgaacaatcttttcttgtaataacttgttggacaaccaaattatacaaagaaatttaggtagtggcacaaaaatcaaagtaatggagagagaaagt 32777702  T
Q  335 agaaagacaatgtgagt 351  Q
    |||| |||| |||||||    
T  32777703 agaaggacagtgtgagt 32777719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 351
Target Start/End: Complemental strand, 34978483 - 34978355
Alignment:
Q  223 aaagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattg 322  Q
    |||| ||| |||||||| ||||||| |||||||||||| ||| ||  ||||   ||| |||||||||||||||||| |||| ||||||| |||| || |     
T  34978483 aaagagcaatgatattttaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtggcacaaaaaacaaagcaata 34978384  T
Q  323 gagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||||||||| || || |||||||||    
T  34978383 gagagagaaagtaaaaggataatgtgagt 34978355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 14419473 - 14419392
Alignment:
Q  66 cagggatgcatttcaaagta--ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||| ||||||||||   |||||||||||||||||||| |||||||  ||||| ||||||||||| ||||||||||||    
T  14419473 cagggatgtatttcaaagttctttttttacagggacgaaaatcaaaactgccccaaaatacagggacgattatcatatttaa 14419392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 6822666 - 6822605
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||  |||||| ||||||||||||||||| | ||||||||||||||    
T  6822666 ttttttacagggacgaaaaccaaaacttgaccaaattacagggacaattatcatatttaagc 6822605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 21985575 - 21985636
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||  |||||||||||||    
T  21985575 ttttttacagggacgaaaatcaaaacgggtccaaattacagggacgaaaatcatatttaagc 21985636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 41345436 - 41345489
Alignment:
Q  94 agggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||    
T  41345436 agggacgaaaatcaaaactggaccaaattatagggacgattatcatatttaagc 41345489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 349
Target Start/End: Complemental strand, 37352285 - 37352171
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| ||||||||  || | | ||  |||| | ||| ||||||| |||||||||| |||  ||||||||||||||| | ||||||||||||    
T  37352285 tatttgaacaaccatttcttgtaccaacttgttggacaaccaaattatacaaataaatttaggtagtgacacaaaaatcaaaacagtagagagagaaagt 37352186  T
Q  335 agaaagacaatgtga 349  Q
    |||| | ||||||||    
T  37352185 agaagggcaatgtga 37352171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 41567920 - 41567982
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    |||||||||||||||||||| ||||| || |||||||||||||| ||  ||||||||||||||    
T  41567920 ttttttacagggacgaaaatcaaaacgggcccaaattacagggatgaaaatcatatttaagct 41567982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 11337708 - 11337769
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||  || ||||||||||    
T  11337708 ttttttacagggacgaaaatcaaaacgggcccaaattacagggacgaaaatgatatttaagc 11337769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 17995911 - 17995850
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| ||  |||||||||||||||||  |||||||||||||    
T  17995911 ttttttacagggacgaaaatcaaaattgacccaaattacagggacgaaaatcatatttaagc 17995850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 37796651 - 37796598
Alignment:
Q  94 agggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||| |||||||  ||||||||||||||||| ||||||||||||||    
T  37796651 agggacgaaaatcaaaactgacccaaattacagggacgattatcatatttaagc 37796598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 132
Target Start/End: Complemental strand, 21984920 - 21984874
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacga 132  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||    
T  21984920 ttttttacagggacgaaaatcaaaacgggcccaaattacagggacga 21984874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 40193943 - 40193861
Alignment:
Q  66 cagggatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| ||| |||||||||| |||||| ||||| |||||||| |||| ||  ||||||||||| ||||| ||||||||||||||    
T  40193943 caggaatgtatttcaaagtttttttttacaggaacgaaaatcaaaattgacccaaattacagcgacgattatcatatttaagc 40193861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 47448955 - 47448885
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    |||||||||||||||||| |||| ||||||| |||| || | |||| |||||||| ||| |||||||||||    
T  47448955 atacaaagaaatttaggtagtggcacaaaaaccaaagcaatagagaaagaaagtaaaaacacaatgtgagt 47448885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 789360 - 789299
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| ||||| |||||| |||||||  |||||||||||||||||  |||||||||||||    
T  789360 ttttttagagggatgaaaatcaaaactgacccaaattacagggacgaaaatcatatttaagc 789299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 12007129 - 12007198
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||||||||||| | |||| |||||||||||| || | |||||||||||||||| ||  ||||||||    
T  12007129 tacaaagaaatttagatagtggcacaaaaatcaaagcaatagagagagaaagtagaatgatcatgtgagt 12007198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 26829629 - 26829674
Alignment:
Q  102 aaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| |||||||||| ||||||||||||||| ||||||||||||||    
T  26829629 aaatcaaaactggactaaattacagggacgattatcatatttaagc 26829674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 32497062 - 32497001
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||| |||||| |||||||  |||||||||||| || | ||||||||||||||    
T  32497062 ttttttacagggatgaaaatcaaaactgacccaaattacaggaacaattatcatatttaagc 32497001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 42276591 - 42276530
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || | ||||||||| |||||  |||||||||||||    
T  42276591 ttttttacagggacgaaaatcaaaacgggtctaaattacagagacgaaaatcatatttaagc 42276530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 47723476 - 47723536
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||| |||||||| |||||||| |||||||| ||||||||  |||||||||||||    
T  47723476 ttttttacagg-acgaaaatcaaaactggtccaaattatagggacgaaaatcatatttaagc 47723536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 46196746 - 46196794
Alignment:
Q  97 gacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    ||||||||| |||  ||||||||||||||||||||| ||||||||||||    
T  46196746 gacgaaaataaaatttggaccaaattacagggacgattatcatatttaa 46196794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 7945395 - 7945334
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||||| |||||  | ||||||||||||||||| |  |||||||||||    
T  7945395 ttttttacaaggacgaaaatcaaaacgtgtccaaattacagggacgaattgcatatttaagc 7945334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 23966377 - 23966316
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  23966377 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 23966316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 26585536 - 26585475
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  | ||||||||||||| | ||||||||||||||    
T  26585536 ttttttacagggacgaaattcaaaaccgacctaaattacagggactaatatcatatttaagc 26585475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 28763037 - 28762976
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | |||||    ||||||||||||||| | ||||||||||||||    
T  28763037 ttttttacagggacgaaattcaaaaccaacccaaattacagggactaatatcatatttaagc 28762976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 34458851 - 34458908
Alignment:
Q  90 ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||| |||| || ||||||||| || || || ||||||||||||||    
T  34458851 ttacagggacgaaaatcaaaattgaaccaaattatagagatgattatcatatttaagc 34458908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 35088435 - 35088374
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||  |||||||| |  |||||  |||||||||||||    
T  35088435 ttttttacagggacgaaaatcaaaactgatccaaattataatgacgaaaatcatatttaagc 35088374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 16779769 - 16779849
Alignment:
Q  66 cagggatgcatttcaaagtatttt-ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||| | |||||||| |||| |||||||||||||| | ||||| |  |||||||||| |||| | ||||||||||||    
T  16779769 cagggatgtaattcaaagtttttttttacagggacgaaattcaaaaccgacccaaattacaaggactaatatcatatttaa 16779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 29723868 - 29723916
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagaga 330  Q
    ||||||||||||||| | ||||||||||||||||| || | ||||||||    
T  29723868 tacaaagaaatttagatagtggtacaaaaatcaaagcaatagagagaga 29723916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 9e-21; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 54280927 - 54280853
Alignment:
Q  75 atttcaaagtatttttta--cagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  54280927 atttcaaagttttttttatacagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaagc 54280853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 21103601 - 21103662
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||||    
T  21103601 ttttttacagggacgaaaatcaaaactggtccaaattacagggacgaaaatcatatttaagc 21103662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 34307437 - 34307553
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||| | |||||||||||| | ||||  |||| | ||| |||||||||||||||||| ||| |||||||| |||| || | || |||||||||    
T  34307437 tatttgaacaatcctttcttgtgacaacttattggacaaccaaattatacaaagaaatttaggtagtgatacaaaaaccaaagcaatagaaagagaaagt 34307536  T
Q  335 agaaagacaatgtgagt 351  Q
    ||||  |||||||||||    
T  34307537 agaagaacaatgtgagt 34307553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 42121735 - 42121797
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||||||| | ||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  42121735 ttttttacatgaacgaaaattaaaactggtccaaattatagggacgattatcatatttaagct 42121797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 51218188 - 51218107
Alignment:
Q  66 cagggatgcatttcaaagtatttttt--acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||| |||||||||| ||||||  ||||||||||| || ||||||||||||||||| |||||| | ||||||||||||    
T  51218188 cagggatgtatttcaaagttttttttttacagggacgaatatcaaaactggaccaaattatagggacaattatcatatttaa 51218107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 347
Target Start/End: Complemental strand, 31104839 - 31104727
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||| |||||||||||||   | ||  ||||   ||| |||| ||||||||||||| |||  ||||||||||||||| | ||||||||||||    
T  31104839 tatttgaacaactttttcttgtgacaatttgtttgacaactaaattatacgaagaaatttaggtagtgacacaaaaatcaaaacaatagagagagaaagt 31104740  T
Q  335 agaaagacaatgt 347  Q
    |||| ||||||||    
T  31104739 agaaggacaatgt 31104727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 335
Target Start/End: Original strand, 41443075 - 41443187
Alignment:
Q  223 aaagggcattgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattg 322  Q
    |||| ||| |||||||||||||| | |||||||||||| ||| ||  ||||   ||| ||||||||||||||||||  | | ||||||||||||||| |     
T  41443075 aaagagcaatgatatttgaacaatcatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtatttgcacaaaaatcaaaacaata 41443174  T
Q  323 gagagagaaagta 335  Q
    |||||||||||||    
T  41443175 gagagagaaagta 41443187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 54295093 - 54295153
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaag 146  Q
    |||||||||||||||||||| |||||||  |||||||||| |||||| |||||||||||||    
T  54295093 ttttttacagggacgaaaatcaaaactgacccaaattacatggacgattatcatatttaag 54295153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 43631210 - 43631269
Alignment:
Q  88 ttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||| ||||||||||||||| ||| |||||| ||||||||||||||    
T  43631210 ttttacaggaacgaaaatcaaaactggaccaaatcacatggacgattatcatatttaagc 43631269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 235 - 349
Target Start/End: Complemental strand, 9692900 - 9692786
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||||||||| ||| ||| ||||   ||| ||||||||||| |||||  |||  |||||||||||| || | ||||||||||||    
T  9692900 tatttgaacaaccatttcttgtgacaaccttttagacaactaaattatacaaagaaagttaggcagtgacacaaaaatcaaagcaatagagagagaaagt 9692801  T
Q  335 agaaagacaatgtga 349  Q
    | || || |||||||    
T  9692800 aaaatgataatgtga 9692786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 43656191 - 43656272
Alignment:
Q  66 cagggatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| |||||| ||||| |||||||| |||||||  |||||||||| |||||| ||||||||||||||    
T  43656191 cagggatgtatttcaaagtttttttttacagg-acgaaaatcaaaactgtcccaaattacaaggacgattatcatatttaagc 43656272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 15951512 - 15951573
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || |||||||||||||||||  || ||||||||||    
T  15951512 ttttttacagggacgaaaatcaaaacgggcccaaattacagggacgaaaatgatatttaagc 15951573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 31090735 - 31090674
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| |||||||||||| ||||| || |||||||||||||||||  |||||||||||||    
T  31090735 ttttttatagggacgaaaatcaaaacgggtccaaattacagggacgaaaatcatatttaagc 31090674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 44706972 - 44706911
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| |  |||||||||||||||||  |||||||||||||    
T  44706972 ttttttacagggacgaaaatcaaaacggacccaaattacagggacgaaaatcatatttaagc 44706911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 44707547 - 44707608
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||  || |||||||||||||||||  |||||||||||||    
T  44707547 ttttttacagggacgaaaatcaaaatgggtccaaattacagggacgaaaatcatatttaagc 44707608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 11058420 - 11058499
Alignment:
Q  67 agggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||  ||||||||| ||||||||||||||| |||| |||||||  | |||||||||||||||  |||||||||||||    
T  11058420 agggatgtttttcaaagt-ttttttacagggacggaaatcaaaactgatctaaattacagggacgaaaatcatatttaagc 11058499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 338
Target Start/End: Original strand, 32145929 - 32145985
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaa 338  Q
    ||||||||||||||||| |||  ||||||||||||||| | ||||||||||||||||    
T  32145929 tacaaagaaatttaggtagtgacacaaaaatcaaaacaatagagagagaaagtagaa 32145985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 351
Target Start/End: Complemental strand, 34456968 - 34456849
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaa 331  Q
    ||||||||||||||   ||||||||||||  || ||| ||||   ||| ||||||||||||||||||  ||| |||||||| ||| || | |||||||||    
T  34456968 tgatatttgaacaattatttcttgtgacaatcttttagacaactaaattatacaaagaaatttaggtattggcacaaaaattaaagcaatagagagagaa 34456869  T
Q  332 agtagaaagacaatgtgagt 351  Q
    |||| ||||| ||| |||||    
T  34456868 agtaaaaagataatatgagt 34456849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 53427487 - 53427407
Alignment:
Q  66 cagggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    |||||||| |||||||  | |||||||||  || |||||| ||||||| || |||||||||| ||||||||||||||||||||    
T  53427487 cagggatgtatttcaa--ttttttttacatagatgaaaatcaaaactgaactaaattacaggaacgactatcatatttaagct 53427407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 25188310 - 25188384
Alignment:
Q  225 agggcattgatatttgaacaaccttttctt-gtgacaccctattaaacaatctaataatacaaagaaatttaggt 298  Q
    |||||| || ||||||||||||||||| || |||||| ||||||| ||||   ||||||||||||||||||||||    
T  25188310 agggcaatgttatttgaacaaccttttttttgtgacaacctattagacaactaaataatacaaagaaatttaggt 25188384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 42489256 - 42489338
Alignment:
Q  66 cagggatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||  |||||||||| |||||| || ||||||||||| |||||||  |||||||||| |||| | ||||||||||||||    
T  42489256 cagggatatatttcaaagtttttttttacggggacgaaaatcaaaactgacccaaattacaaggacaattatcatatttaagc 42489338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 54281672 - 54281756
Alignment:
Q  66 cagggatgcatttcaaagtatttt---ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| ||||   |||||||||||||||| |||  ||| |||||| ||||| |||| ||||||||||||||    
T  54281672 cagggatgtatttcaaagtttttttttttacagggacgaaaatcaaatttggcccaaataacaggaacgattatcatatttaagc 54281756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 4996432 - 4996371
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | |||||||  |||||||||||| || | ||||||||||||||    
T  4996432 ttttttacagggacgaaattcaaaactgacccaaattacaggaactaatatcatatttaagc 4996371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 4996893 - 4996954
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||| ||||||||| |||||  | |||||||||||||||||  |||||||||||||    
T  4996893 ttttttacagtgacgaaaatcaaaacgagcccaaattacagggacgaaaatcatatttaagc 4996954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 23485561 - 23485500
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  23485561 ttttttacagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 23485500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 31091329 - 31091390
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || ||||||||||  |||||  |||||||||||||    
T  31091329 ttttttacagggacgaaaatcaaaacgggcccaaattacaaagacgaaaatcatatttaagc 31091390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 41780392 - 41780453
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| ||||||||| ||||| ||||| || |||||||||||||||||  |||||||||||||    
T  41780392 ttttctacagggacaaaaatcaaaacgggtccaaattacagggacgaaaatcatatttaagc 41780453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 44878986 - 44879047
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  44878986 ttttttacagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 44879047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 335
Target Start/End: Original strand, 4494133 - 4494233
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||| ||||| | | ||  |||| | ||| |||||||||||||||||| |||  |||||||||||| || | || |||||||||    
T  4494133 tatttgaacaaccatttcttatgacaacttgttggacaaccaaattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagaaagagaaagt 4494232  T
Q  335 a 335  Q
    |    
T  4494233 a 4494233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 34985177 - 34985101
Alignment:
Q  70 gatgcatttcaaagtatttttt-acagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||| |||||||||| |||||| ||| |||||||||| |||| ||||||||||||||  ||||| ||| ||||||||    
T  34985177 gatgtatttcaaagtttttttttacatggacgaaaatcaaaattggaccaaattacacagacgattattatatttaa 34985101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 53841017 - 53841061
Alignment:
Q  66 cagggatgcatttcaaagtattttttacagggacgaaaattaaaa 110  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||    
T  53841017 cagggatgcatttcaaagttttttttacagggactaaaatcaaaa 53841061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 48045639 - 48045698
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||| ||||||| ||| |||||  |||||||||||||| |||| ||||||||||||    
T  48045639 ttttttacggggacgacaatcaaaacgagaccaaattacaggaacgattatcatatttaa 48045698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 5114205 - 5114135
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagtg 352  Q
    |||||||||| | |||| |||  |||||||||||| || | ||||||||||||| ||||| ||||||||||    
T  5114205 tacaaagaaaatgaggtagtgacacaaaaatcaaagcaatagagagagaaagtaaaaagataatgtgagtg 5114135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 1984908 - 1984847
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||||| ||||  || ||||||||||||||||| |  |||||||||||    
T  1984908 ttttttacaaggacgaaaatcaaaatgggcccaaattacagggacgaattgcatatttaagc 1984847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 3990842 - 3990887
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacg 131  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||    
T  3990842 ttttttacagggacgaaaatcaaaattagcccaaattacagggacg 3990887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 8482558 - 8482619
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||| |||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  8482558 ttttttacagggaggaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 8482619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 23143518 - 23143579
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  ||||||||||||||| |  |||||||||||||    
T  23143518 ttttttacagggacgaaattcaaaaccgacccaaattacagggactaaaatcatatttaagc 23143579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 25166743 - 25166804
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  25166743 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 25166804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 314
Target Start/End: Complemental strand, 39099446 - 39099413
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatca 314  Q
    |||||||||||||||||| |||||||||||||||    
T  39099446 atacaaagaaatttaggtagtggtacaaaaatca 39099413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 41354775 - 41354836
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||||   ||| |||||||||||||| |||| | |||| ||||||||||||||    
T  41354775 ttttttacagggacatgaatcaaaactggaccaaagtacatgaacgattatcatatttaagc 41354836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 53427978 - 53428023
Alignment:
Q  102 aaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| ||||||||||||||||||||  |||| ||||||||||||||    
T  53427978 aaatcaaaactggaccaaattacagaaacgattatcatatttaagc 53428023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 54600195 - 54600150
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacg 131  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||    
T  54600195 ttttttacagggacgaaaatcaaaattagcccaaattacagggacg 54600150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 147
Target Start/End: Complemental strand, 25165960 - 25165900
Alignment:
Q  87 tttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  25165960 tttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 25165900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 39841264 - 39841323
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  39841264 ttttttacagggacgaaaatcaaaactggaccaaattacagggacgattatcatatttaa 39841323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 7918958 - 7919074
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||| |||||||||||| | | ||| |||| | ||| |||||||||||||||||| |||| ||||||||||||  | | |||||| |||||    
T  7918958 tatttgaacaaccctttcttgtgacaacttgttagacaaccaaattatacaaagaaatttaggtagtggcacaaaaatcaaagtaatagagagataaagt 7919057  T
Q  335 agaaagacaatgtgagt 351  Q
    |||| |||||| |||||    
T  7919058 agaaggacaatatgagt 7919074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 30856178 - 30856098
Alignment:
Q  67 agggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||| | |||||| ||||| ||||||||    
T  30856178 agggatgtatttcaaagttttttttacagtgacgaaaattaaaactggcccaaattataaggacgattatcaaatttaagc 30856098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 46047276 - 46047337
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||||    
T  46047276 ttttttacagggacgaaaattaaaattggactaaattacatggacgattatcatatttaagc 46047337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 21081040 - 21081101
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| |||||||||  ||||||||||||||| | ||||||||||||||    
T  21081040 ttttttacagggacgaaatttaaaactgacccaaattacagggactaatatcatatttaagc 21081101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 46728691 - 46728774
Alignment:
Q  66 cagggatgcatttcaaagtatttttta--cagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| |||||||  ||||||||||||| |||||||  ||||| ||||| ||||| ||||||||||||||    
T  46728691 cagggatgtatttcaaagttttttttatacagggacgaaaatcaaaactgacccaaactacagtgacgattatcatatttaagc 46728774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 1743268 - 1743209
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaa 145  Q
    |||||||||||||||||||| ||||||| || |||||| |||||||| ||||||||||||    
T  1743268 ttttttacagggacgaaaatcaaaactgaactaaattatagggacgattatcatatttaa 1743209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 39025459 - 39025394
Alignment:
Q  66 cagggatgcatttcaaagtatttttt--acagggacgaaaattaaaactggaccaaattacaggga 129  Q
    |||||||| |||||||||| ||||||  |||||||||||||| |||| ||||||||||||||||||    
T  39025459 cagggatgtatttcaaagttttttttttacagggacgaaaatcaaaattggaccaaattacaggga 39025394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 171437 - 171498
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||   |||||||||| ||||| ||||||||||||||    
T  171437 ttttttacagggacgaaaatcaaaactgactcaaattacagagacgattatcatatttaagc 171498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 29373932 - 29374012
Alignment:
Q  66 cagggatgcatttcaaagtatttttt--acagggacgaaaattaaaactggaccaaattacagggacgactatcatattta 144  Q
    |||||||| |||||||||| ||||||  |||| ||||||||| |||||||  |||||||||| |||||| |||||||||||    
T  29373932 cagggatgtatttcaaagttttttttttacagtgacgaaaatcaaaactgatccaaattacaaggacgattatcatattta 29374012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 30856894 - 30856955
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||| |||||||| |||||| |||||||||| ||||| || ||||||||||||||    
T  30856894 ttttttacaggaacgaaaatcaaaactagaccaaattatagggaagattatcatatttaagc 30856955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 41147275 - 41147336
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| || |||||||| |||||||| |||||||||| |||||| ||||||||||||||    
T  41147275 ttttttaccggaacgaaaatcaaaactggcccaaattacaaggacgattatcatatttaagc 41147336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 51465813 - 51465752
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||| ||||||||||||| |||||||  ||||||||||||||| | ||||||||||||||    
T  51465813 ttttttgcagggacgaaaatcaaaactgatccaaattacagggactattatcatatttaagc 51465752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 148
Target Start/End: Original strand, 1743995 - 1744078
Alignment:
Q  67 agggatgcatttcaaagtattt--tttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||||| |||||||||| |||  |||||||| |||||||| |||||||| ||||||||||  || || |||||||||||||||    
T  1743995 agggatgtatttcaaagtttttcttttacaggaacgaaaatcaaaactggcccaaattacatagatgattatcatatttaagct 1744078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 70 - 147
Target Start/End: Original strand, 43380516 - 43380595
Alignment:
Q  70 gatgcatttcaaagtattttt--tacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| |||||||||| |||||  | ||| ||||||||| |||||||  ||||||||||||||||| ||||||||||||||    
T  43380516 gatgtatttcaaagtttttttgttgcagagacgaaaatcaaaactgatccaaattacagggacgattatcatatttaagc 43380595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 51466437 - 51466521
Alignment:
Q  66 cagggatgcatttcaaagtatttt---ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| |||||||||| ||||   |||||||||||||||| |||||||  | |||||| | |||||| ||||||||||||||    
T  51466437 cagggatgtatttcaaagtttttttttttacagggacgaaaatcaaaactgacctaaattataaggacgattatcatatttaagc 51466521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 5771640 - 5771721
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaa 316  Q
    ||||||||||| | |||||||||||| ||| ||| ||||   ||| |||||||||||||||||| |||| | ||||||||||    
T  5771640 tatttgaacaatcatttcttgtgacaaccttttagacaactaaattatacaaagaaatttaggtagtggcagaaaaatcaaa 5771721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 16878807 - 16878746
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| ||||||||||| ||||| ||  ||||||||||||||||  |||||||||||||    
T  16878807 ttttttactgggacgaaaatcaaaacgggttcaaattacagggacgaaaatcatatttaagc 16878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 19439269 - 19439330
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || |||||||||| | ||||  |||||||||||||    
T  19439269 ttttttacagggacgaaaatcaaaacgggcccaaattacaagaacgaaaatcatatttaagc 19439330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 35529323 - 35529392
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||||||||||||| |||| | ||||| |||  || ||||||||||||||| ||||| |||||||||    
T  35529323 tacaaagaaatttaggtagtggcataaaaaccaacgcaatggagagagaaagtaaaaagagaatgtgagt 35529392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 43379831 - 43379770
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||    ||||||||||||||  ||||||||||||||    
T  43379831 ttttttacagggacgaaaatcaaaactgtcaaaaattacagggacgtttatcatatttaagc 43379770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 351
Target Start/End: Complemental strand, 48858994 - 48858882
Alignment:
Q  239 tgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaa 338  Q
    ||||||||| |||||||||||| ||| ||  ||||   ||| |||||||||||||||| | |||  |||||||||||| || | ||||||| ||||| ||    
T  48858994 tgaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttagatagtgacacaaaaatcaaagcaatagagagaggaagtaaaa 48858895  T
Q  339 agacaatgtgagt 351  Q
     || |||||||||    
T  48858894 tgataatgtgagt 48858882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 348
Target Start/End: Complemental strand, 4858039 - 4857972
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtg 348  Q
    ||||||||||||||| || |||| ||||| |||||| || | ||||||||||||||||  ||||||||    
T  4858039 atacaaagaaatttaagtagtggcacaaatatcaaagcaatagagagagaaagtagaagaacaatgtg 4857972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 40439782 - 40439849
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtg 348  Q
    |||||||||||||||||| |||  ||||| |||||| || | ||||||||||||||||  ||||||||    
T  40439782 atacaaagaaatttaggtagtgtcacaaatatcaaagcaatagagagagaaagtagaagaacaatgtg 40439849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 347
Target Start/End: Original strand, 50726194 - 50726257
Alignment:
Q  284 caaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgt 347  Q
    |||||||| | |||| |||| ||||||||||||||| | ||||||||||||| ||||| |||||    
T  50726194 caaagaaaatgaggtagtggcacaaaaatcaaaacaatagagagagaaagtaaaaagataatgt 50726257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 351
Target Start/End: Complemental strand, 33100912 - 33100866
Alignment:
Q  305 acaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||||||||||| | ||||||||||||| ||||| |||||||||    
T  33100912 acaaaaatcaaaacaatagagagagaaagtaaaaagataatgtgagt 33100866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 351
Target Start/End: Complemental strand, 35369804 - 35369758
Alignment:
Q  305 acaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    |||||||||||| || | ||||||||||||| |||||||||||||||    
T  35369804 acaaaaatcaaagcaatagagagagaaagtaaaaagacaatgtgagt 35369758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 21080437 - 21080376
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| ||| |||||| ||||| |  |||||||||||||||||  |||||||||||||    
T  21080437 ttttttacaaggatgaaaatcaaaacggacccaaattacagggacgaaaatcatatttaagc 21080376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 351
Target Start/End: Complemental strand, 23645538 - 23645469
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtgagt 351  Q
    ||||||| || | |||| |||| ||||||| ||||||| | ||||||||||||| ||||| |||||||||    
T  23645538 tacaaaggaaatgaggtagtggcacaaaaaccaaaacaatagagagagaaagtaaaaagataatgtgagt 23645469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 26252804 - 26252864
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||||||   ||||||||| |||| | ||||||||||||||    
T  26252804 ttttttacagggacgaaaatcaaaactgactcaaattaca-ggacaattatcatatttaagc 26252864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 37910732 - 37910793
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| |  ||||||||| |||||||  || ||||||||||    
T  37910732 ttttttacagggacgaaaatcaaaacggatccaaattacggggacgaaaatgatatttaagc 37910793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 39840568 - 39840511
Alignment:
Q  90 ttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||| |||||||  | |||||||| ||| || ||||||||||||||    
T  39840568 ttacagggacgaaaatcaaaactgaccaaaattacatggatgattatcatatttaagc 39840511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 39958062 - 39958001
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||| |||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  39958062 ttttttatagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 39958001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 39958605 - 39958666
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||| |||||||||| ||||| || ||||||||||| |||||  || ||||||||||    
T  39958605 ttttttacaaggacgaaaatcaaaacgggcccaaattacagagacgaaaatgatatttaagc 39958666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 46727990 - 46727929
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| ||||||||||||||| |||||||  ||||||| ||| ||| | ||||||||||||||    
T  46727990 ttttatacagggacgaaaatcaaaactgtcccaaattccagtgactattatcatatttaagc 46727929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 50126444 - 50126505
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  |||||||||| |||| | ||||||||||||||    
T  50126444 ttttttacagggacgaaattcaaaaccgacccaaattacatggactaatatcatatttaagc 50126505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 23551734 - 23551686
Alignment:
Q  84 tattttttacagggacgaaaattaaaactggaccaaattacagggacga 132  Q
    ||||||||||| |||||||||| |||||  | |||||||||||||||||    
T  23551734 tattttttacaaggacgaaaatcaaaacgcgtccaaattacagggacga 23551686  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 30984145 - 30984189
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggac 130  Q
    |||||||||||||||||||| |||||  | |||||||||||||||    
T  30984145 ttttttacagggacgaaaatcaaaacgcgtccaaattacagggac 30984189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 6e-19; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 544422 - 544343
Alignment:
Q  67 agggatgcatttcaaagtatttttt--acagggacgaaaattaaaactggaccaaattacagggacgactatcatattta 144  Q
    ||||||| |||||||||| ||||||  |||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  544422 agggatgtatttcaaagttttttttttacagggacgaaaatcaaaactggaccaaattacagagacgattatcatattta 544343  T

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Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 3184765 - 3184691
Alignment:
Q  67 agggatgcatttcaaagtattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatat 141  Q
    ||||||| |||||||| | |||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||    
T  3184765 agggatgtatttcaaatttttttttacagggacgaaaatcaaaacttgtccaaattacagggacgattatcatat 3184691  T

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Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 351
Target Start/End: Complemental strand, 8645486 - 8645367
Alignment:
Q  232 tgatatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaa 331  Q
    |||||||||||||||| |||||||||||| ||| ||  ||||   ||| |||||||||||||||||| |||   || |||||||| || | |||||||||    
T  8645486 tgatatttgaacaaccatttcttgtgacaaccttttggacaactaaattatacaaagaaatttaggtagtgacgcataaatcaaagcaatagagagagaa 8645387  T
Q  332 agtagaaagacaatgtgagt 351  Q
    |||| || || |||||||||    
T  8645386 agtaaaaggataatgtgagt 8645367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 1175100 - 1175161
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    ||||||||||||| |||||| ||||| || |||||||||||||||||  |||||||||||||    
T  1175100 ttttttacagggatgaaaatcaaaacgggtccaaattacagggacgaaaatcatatttaagc 1175161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 281 - 348
Target Start/End: Original strand, 18065032 - 18065099
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtg 348  Q
    |||||||||||||||||| |||| ||||| |||||| || | ||||||||||||||||  ||||||||    
T  18065032 atacaaagaaatttaggtagtggcacaaatatcaaagcaatagagagagaaagtagaagaacaatgtg 18065099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 476983 - 476922
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| || ||||||||||||||| |  || ||||||||||    
T  476983 ttttttacagggacgaaaatcaaaacgggcccaaattacagggacaaaaatgatatttaagc 476922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 477647 - 477708
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  477647 ttttttacagggacgaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 477708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 8505716 - 8505784
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgtga 349  Q
    |||||||||||||||||| || |||||||||||||| || | |||||| |||||| || || |||||||    
T  8505716 atacaaagaaatttaggtagttgtacaaaaatcaaagcaatagagagaaaaagtaaaaggataatgtga 8505784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 8991035 - 8990970
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgt 347  Q
    |||||||||||| | || |||| ||||||||||||||| | || |||||||||| ||||| |||||    
T  8991035 tacaaagaaattaaagtagtggcacaaaaatcaaaacaatagaaagagaaagtaaaaagagaatgt 8990970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 9015482 - 9015417
Alignment:
Q  282 tacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaatgt 347  Q
    |||||||||||| | || |||| ||||||||||||||| | || |||||||||| ||||| |||||    
T  9015482 tacaaagaaattaaagtagtggcacaaaaatcaaaacaatagaaagagaaagtaaaaagagaatgt 9015417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 9699153 - 9699198
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacg 131  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||    
T  9699153 ttttttacagggacgaaaatcaaaattagcccaaattacagggacg 9699198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 24051317 - 24051256
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  24051317 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 24051256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Original strand, 29979222 - 29979283
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  29979222 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 29979283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 31170274 - 31170213
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||| ||||||| |  |||||||||||||||   |||| |||||||||    
T  31170274 ttttttacagggacgaaatttaaaaccgatccaaattacagggactgatatcttatttaagc 31170213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 32404037 - 32403976
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||| ||| ||||||||||| |||| ||| ||||||||||||||| |  |||||||||||||    
T  32404037 ttttctacggggacgaaaatcaaaagtggtccaaattacagggacaaaaatcatatttaagc 32403976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 2812494 - 2812554
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaag 146  Q
    ||||||||| |||||||||| |||||||  | |||||| ||||||||  ||||||||||||    
T  2812494 ttttttacaaggacgaaaatcaaaactgatctaaattatagggacgaaaatcatatttaag 2812554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 348
Target Start/End: Original strand, 8849 - 8962
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    |||||||||||||||||| ||||||| | | ||  |||| |  || |||||||||||||||||| |||  |||||||||||| || | ||||||||||||    
T  8849 tatttgaacaaccttttcatgtgacaactttttggacaaccacattatacaaagaaatttaggtagtgacacaaaaatcaaagcaatagagagagaaagt 8948  T
Q  335 agaaagacaatgtg 348  Q
    ||||  ||||||||    
T  8949 agaagaacaatgtg 8962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 8647 - 8531
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||  |||||||||||| | | ||| ||||   ||| ||| |||||||||||| |||||  |||||||||||| || | || |||||||||    
T  8647 tatttgaacaactatttcttgtgacaacttgttagacaactaaattatataaagaaatttagttggtgacacaaaaatcaaagcaatagaaagagaaagt 8548  T
Q  335 agaaagacaatgtgagt 351  Q
    |||| ||||||||||||    
T  8547 agaaggacaatgtgagt 8531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0785 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0785
Description:

Target: scaffold0785; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 148
Target Start/End: Original strand, 1568 - 1630
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagct 148  Q
    ||||||||| |||||||| | ||||| |  ||||||||||||||| | |||||||||||||||    
T  1568 ttttttacacggacgaaattcaaaaccgatccaaattacagggactaatatcatatttaagct 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 135566 - 135484
Alignment:
Q  66 cagggatgcatttcaaag-tattttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||| | ||||||| | |||||||||||||| ||| | ||||| |  ||||||||||||||| | ||||||||||||||    
T  135566 cagggatgtaattcaaagattttttttacagggacaaaattcaaaaccgacccaaattacagggactaatatcatatttaagc 135484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 28345 - 28284
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| ||||| |  ||||||||| |||||||  || ||||||||||    
T  28345 ttttttacagggacgaaaatcaaaacggatccaaattacggggacgaaaatgatatttaagc 28284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 10368 - 10307
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacgactatcatatttaagc 147  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||  |  |||||||||||    
T  10368 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacggtttgcatatttaagc 10307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Original strand, 11135 - 11180
Alignment:
Q  86 ttttttacagggacgaaaattaaaactggaccaaattacagggacg 131  Q
    |||||||||||||||||||| |||| | | ||||||||||||||||    
T  11135 ttttttacagggacgaaaatcaaaattcgcccaaattacagggacg 11180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 351
Target Start/End: Original strand, 6416 - 6532
Alignment:
Q  235 tatttgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagt 334  Q
    ||||||||||||||||| |||| ||| | | ||| |||| | ||  ||||||||  |||||| | |||  ||||||||||||  | | ||||||||||||    
T  6416 tatttgaacaaccttttattgttacaacttcttatacaaccaaactatacaaagggatttagatagtgacacaaaaatcaaagtaatagagagagaaagt 6515  T
Q  335 agaaagacaatgtgagt 351  Q
    ||||  |||||||||||    
T  6516 agaagaacaatgtgagt 6532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 1815 - 1719
Alignment:
Q  239 tgaacaaccttttcttgtgacaccctattaaacaatctaataatacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagta 335  Q
    ||||||||| ||||||| |||| ||| ||  ||||   ||| |||||||||||||||| | |||| |||||||||||| || |  ||||||||||||    
T  1815 tgaacaaccatttcttgcgacaaccttttggacaactaaattatacaaagaaatttagatagtggcacaaaaatcaaagcaataaagagagaaagta 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 13499 - 13563
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaat 345  Q
    |||||||||||||||||  ||| |||||||||| ||  | | || ||||||||||||||||||||    
T  13499 atacaaagaaatttaggcagtgatacaaaaatcgaagtaatagaaagagaaagtagaaagacaat 13563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 345
Target Start/End: Complemental strand, 59345 - 59281
Alignment:
Q  281 atacaaagaaatttaggtggtggtacaaaaatcaaaacattggagagagaaagtagaaagacaat 345  Q
    |||||||||||||||||  ||| |||||||||| ||  | | || ||||||||||||||||||||    
T  59345 atacaaagaaatttaggcagtgatacaaaaatcgaagtaatagaaagagaaagtagaaagacaat 59281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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