View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1583_low_47 (Length: 281)
Name: NF1583_low_47
Description: NF1583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1583_low_47 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 37032374 - 37032648
Alignment:
| Q |
1 |
tgcaatggaaactaacacctctactgccccaacaactacctctgcttcttctgctactactgatgctaaggttcaacgagtaacaaagaaatcttctgat |
100 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37032374 |
tgcaatggaaactaacaactctactgccccaacaactacctctgcttcttctgctactactgatgctaaggttcaacgagtaacaaagaaatcttctgac |
37032473 |
T |
|
| Q |
101 |
gagctactaaggaaatttgctgaagtgggtaccaatgagaagaaagagttacgtcttatcaaacgccgcaaaaagatgaaggaaaatcaatctgagagct |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37032474 |
gagctactaaggaaatttgctgaagtgggtaccaatgagaagaaagagttacgtcttatcaaacgccgcaaaaagatgaaggaaaatcaatctgagagct |
37032573 |
T |
|
| Q |
201 |
cttcaaacggcagcacagccgtcgtggaaaggaggtcgcttttgccggcaacagtgagccggaagtctgtgctcc |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37032574 |
cttcaaacggcagcacagccgtcgtggaaaggaggtcgcttttgccggcaacagtgagccggaagtctgtgctcc |
37032648 |
T |
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