View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1583_low_51 (Length: 269)
Name: NF1583_low_51
Description: NF1583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1583_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 8 - 253
Target Start/End: Original strand, 41735502 - 41735747
Alignment:
| Q |
8 |
atattattctaccatatgcctttgttgtcgaaccctcactgaggagttacatggatcatgaaaggattacaagaatcagttgaaacagaagtaatcacca |
107 |
Q |
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| T |
41735502 |
atattattctaccatatgcctttgttgtcgaaccctcactgagaagttacatggatcatgaaaggattacaagaatcagttgaaacagaagtaatcacca |
41735601 |
T |
|
| Q |
108 |
ttgataaatcttatcacaaaaaaggcttaacaaaagaggtaagatcacataccatgcgacaattatgttcctcgtgttactatgcccgcctttgtggtaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
41735602 |
ttgataaatcttatcacaaaaaaggcttaacaaaagaggtaagatcacataccatgcgacaattatgttcctcgtgttactatggccgcctttgtggtaa |
41735701 |
T |
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| Q |
208 |
gccaggtcatcatgcacctcagtgcaaacatcgcaagaggaaagac |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41735702 |
gccaggtcatcatgcacctcagtgcaaacatcgcaagaggaaagac |
41735747 |
T |
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