View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1583_low_8 (Length: 437)
Name: NF1583_low_8
Description: NF1583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1583_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 14 - 420
Target Start/End: Original strand, 39234229 - 39234637
Alignment:
| Q |
14 |
tggttgtttaaatatcgtttctatggtatatattataaaactttcctttgtaaaaagctgcatcaatcacactacactatatgtacttttttgcattgcc |
113 |
Q |
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|||||||| ||||||||||||| | |||| ||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
39234229 |
tggttgttcaaatatcgtttctctattataaattataaaattttcctttgcaaaaagttgcatcaatcacactacactatatgtacttttttgcattgcc |
39234328 |
T |
|
| Q |
114 |
gcatagacatttttgtccatgagctatg-cattgggctgattttttcgactcatcaaa-gcaaagtgatcaaagtatacaattcacataacttattatat |
211 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| |
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| T |
39234329 |
gcatagacatttttgtccatgagctatggcattgggctgattttttcaactcatcaaaagcaaagtgatcaaagtatacaattcatataacttattatat |
39234428 |
T |
|
| Q |
212 |
tttatttatcacattatacagctaaagtttgattacttttggaataatggacccttaatatgtttttaaaactttaaagtggatatatgctttaaaaatt |
311 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
39234429 |
tttatttatcacattatacggctaaagtttgattacttttggaataatggacccttaatatgtttttaaaactttaaggtggatatatgctttaaaaatt |
39234528 |
T |
|
| Q |
312 |
cccgtcacagtacttcacagttaatcattttcgcctcgccacatctggtatatatgaatgtgcttttcattctcatgctcattgttcaagtcctcctata |
411 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
39234529 |
cccgtcacagtacttcacagttaatcattttcgcctcgccacatctggtatatatgagtgtgcttttcattctcatgctcattgttcaagtcctcctata |
39234628 |
T |
|
| Q |
412 |
cttagtaat |
420 |
Q |
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||||||||| |
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| T |
39234629 |
cttagtaat |
39234637 |
T |
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