View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1584-INSERTION-1 (Length: 805)

Name: NF1584-INSERTION-1
Description: NF1584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1584-INSERTION-1
NF1584-INSERTION-1
[»] chr5 (71 HSPs)
chr5 (333-805)||(41170889-41171359)
chr5 (117-255)||(41170627-41170765)
chr5 (116-255)||(32487386-32487524)
chr5 (114-247)||(6500441-6500573)
chr5 (116-252)||(9498684-9498820)
chr5 (124-247)||(40296350-40296473)
chr5 (116-254)||(18603148-18603286)
chr5 (124-247)||(15370099-15370222)
chr5 (116-255)||(27502063-27502202)
chr5 (124-247)||(13415795-13415918)
chr5 (130-236)||(26074618-26074724)
chr5 (121-255)||(36492244-36492378)
chr5 (116-236)||(624188-624308)
chr5 (116-236)||(6500815-6500934)
chr5 (124-255)||(3295042-3295172)
chr5 (124-247)||(12662687-12662810)
chr5 (131-232)||(11417027-11417128)
chr5 (124-236)||(26074192-26074304)
chr5 (130-245)||(25327941-25328056)
chr5 (137-255)||(3295372-3295489)
chr5 (130-235)||(6224202-6224307)
chr5 (125-233)||(299490-299598)
chr5 (130-225)||(26075219-26075314)
chr5 (124-247)||(41632782-41632905)
chr5 (121-255)||(29549282-29549416)
chr5 (130-236)||(42405642-42405748)
chr5 (124-236)||(35150007-35150118)
chr5 (134-247)||(34753060-34753173)
chr5 (124-233)||(36568616-36568725)
chr5 (11-87)||(41170474-41170550)
chr5 (136-255)||(33747783-33747902)
chr5 (116-236)||(623810-623930)
chr5 (130-233)||(26074830-26074934)
chr5 (130-233)||(1028566-1028669)
chr5 (130-232)||(38427554-38427655)
chr5 (116-247)||(5723826-5723957)
chr5 (130-219)||(42508618-42508707)
chr5 (150-233)||(15370428-15370511)
chr5 (130-231)||(2411013-2411114)
chr5 (132-249)||(35914857-35914974)
chr5 (130-233)||(24489255-24489356)
chr5 (125-232)||(36521946-36522053)
chr5 (116-199)||(7768842-7768925)
chr5 (130-236)||(36522283-36522389)
chr5 (130-253)||(300965-301080)
chr5 (130-204)||(26074324-26074398)
chr5 (124-233)||(26590959-26591068)
chr5 (132-232)||(35167888-35167988)
chr5 (124-219)||(31509623-31509718)
chr5 (132-231)||(41635242-41635341)
chr5 (191-236)||(13042606-13042651)
chr5 (132-205)||(39309692-39309764)
chr5 (130-219)||(42524723-42524811)
chr5 (191-242)||(13112604-13112655)
chr5 (115-164)||(5660289-5660338)
chr5 (8-56)||(41168525-41168573)
chr5 (138-236)||(31509745-31509844)
chr5 (252-303)||(41168747-41168798)
chr5 (146-232)||(13786051-13786136)
chr5 (182-236)||(32445943-32445997)
chr5 (254-287)||(41170808-41170841)
chr5 (206-238)||(5963765-5963797)
chr5 (132-184)||(6225052-6225104)
chr5 (161-233)||(19275566-19275637)
chr5 (195-238)||(34103625-34103668)
chr5 (191-238)||(36389020-36389067)
chr5 (181-232)||(36527145-36527196)
chr5 (124-166)||(35150747-35150789)
chr5 (124-166)||(35151038-35151080)
chr5 (192-238)||(41341523-41341569)
chr5 (210-247)||(26900052-26900089)
[»] chr1 (66 HSPs)
chr1 (116-247)||(44290493-44290624)
chr1 (116-247)||(44290859-44290991)
chr1 (116-255)||(41759475-41759614)
chr1 (116-246)||(3550712-3550842)
chr1 (130-250)||(17294583-17294703)
chr1 (116-252)||(50052053-50052189)
chr1 (118-236)||(32594762-32594880)
chr1 (124-250)||(34364925-34365051)
chr1 (130-255)||(37556117-37556242)
chr1 (124-255)||(41157375-41157506)
chr1 (130-255)||(26661549-26661674)
chr1 (124-255)||(41142372-41142504)
chr1 (116-247)||(3537634-3537765)
chr1 (124-255)||(34364507-34364638)
chr1 (124-245)||(29798199-29798320)
chr1 (116-236)||(48588534-48588654)
chr1 (124-255)||(5319992-5320123)
chr1 (124-255)||(41156991-41157122)
chr1 (130-255)||(26661925-26662050)
chr1 (132-236)||(14318875-14318979)
chr1 (116-203)||(3537226-3537313)
chr1 (124-255)||(31767188-31767319)
chr1 (116-255)||(45494001-45494145)
chr1 (125-247)||(40082408-40082529)
chr1 (124-218)||(41184489-41184583)
chr1 (124-233)||(22077544-22077653)
chr1 (121-247)||(38804390-38804516)
chr1 (124-236)||(24600360-24600472)
chr1 (134-233)||(3875380-3875479)
chr1 (130-247)||(9955913-9956032)
chr1 (130-245)||(11977286-11977401)
chr1 (124-255)||(39066227-39066358)
chr1 (116-252)||(44043802-44043943)
chr1 (130-255)||(34649444-34649569)
chr1 (130-255)||(37555736-37555860)
chr1 (113-247)||(32168733-32168856)
chr1 (124-229)||(66525-66630)
chr1 (124-236)||(37850646-37850758)
chr1 (124-247)||(45084382-45084499)
chr1 (124-233)||(66136-66247)
chr1 (134-225)||(5528811-5528902)
chr1 (130-233)||(5575110-5575213)
chr1 (124-218)||(24132049-24132143)
chr1 (124-230)||(30630690-30630796)
chr1 (124-205)||(21378118-21378199)
chr1 (124-233)||(22077878-22077986)
chr1 (149-232)||(22077160-22077243)
chr1 (124-232)||(44685456-44685564)
chr1 (125-232)||(22793279-22793387)
chr1 (124-255)||(1188615-1188746)
chr1 (132-247)||(45839635-45839754)
chr1 (124-190)||(4878803-4878869)
chr1 (151-232)||(4956218-4956299)
chr1 (124-233)||(19283504-19283613)
chr1 (124-232)||(1187414-1187522)
chr1 (114-156)||(50051777-50051819)
chr1 (178-218)||(41184152-41184192)
chr1 (166-233)||(10351202-10351269)
chr1 (124-171)||(35154150-35154197)
chr1 (195-245)||(11977015-11977065)
chr1 (194-252)||(50051718-50051776)
chr1 (179-236)||(35154049-35154106)
chr1 (130-193)||(35530403-35530466)
chr1 (124-175)||(50469188-50469239)
chr1 (115-189)||(4266875-4266949)
chr1 (195-232)||(47380217-47380254)
[»] chr2 (69 HSPs)
chr2 (116-255)||(36178632-36178771)
chr2 (116-247)||(37106180-37106311)
chr2 (116-233)||(14745716-14745833)
chr2 (115-255)||(41283502-41283642)
chr2 (116-247)||(5542660-5542791)
chr2 (111-236)||(5543044-5543169)
chr2 (116-233)||(14745343-14745460)
chr2 (120-247)||(37105920-37106047)
chr2 (130-247)||(15880269-15880386)
chr2 (130-236)||(28254283-28254389)
chr2 (130-247)||(6421391-6421508)
chr2 (124-255)||(962598-962729)
chr2 (116-231)||(36178320-36178435)
chr2 (131-255)||(15511522-15511646)
chr2 (130-255)||(33731654-33731779)
chr2 (142-255)||(36178198-36178311)
chr2 (124-236)||(37632643-37632755)
chr2 (124-235)||(28531361-28531472)
chr2 (124-232)||(31468800-31468904)
chr2 (130-250)||(6712982-6713103)
chr2 (124-229)||(38796673-38796778)
chr2 (124-233)||(42514649-42514758)
chr2 (140-255)||(6422126-6422241)
chr2 (124-230)||(35580776-35580881)
chr2 (130-247)||(36005915-36006031)
chr2 (124-233)||(40679678-40679787)
chr2 (130-254)||(40733523-40733647)
chr2 (124-231)||(16542449-16542556)
chr2 (130-212)||(31899496-31899578)
chr2 (132-238)||(37895105-37895211)
chr2 (135-255)||(40163399-40163520)
chr2 (116-247)||(1769884-1770015)
chr2 (116-199)||(7598601-7598684)
chr2 (130-236)||(29676909-29677020)
chr2 (137-247)||(5367468-5367578)
chr2 (148-234)||(31259664-31259750)
chr2 (124-202)||(38796298-38796376)
chr2 (130-255)||(40733889-40734013)
chr2 (124-236)||(7598228-7598340)
chr2 (124-232)||(33561501-33561609)
chr2 (130-233)||(29874072-29874175)
chr2 (137-247)||(23346250-23346359)
chr2 (135-233)||(30313189-30313286)
chr2 (124-236)||(37894738-37894850)
chr2 (124-219)||(12529091-12529186)
chr2 (140-229)||(28254165-28254254)
chr2 (135-232)||(29873587-29873684)
chr2 (124-233)||(30323464-30323573)
chr2 (124-181)||(36785664-36785721)
chr2 (132-247)||(29676543-29676652)
chr2 (124-232)||(33953821-33953929)
chr2 (132-231)||(9231257-9231356)
chr2 (186-236)||(6421793-6421843)
chr2 (124-219)||(16590888-16590978)
chr2 (166-236)||(31385779-31385849)
chr2 (177-255)||(36784287-36784365)
chr2 (132-231)||(12910236-12910335)
chr2 (186-236)||(6421688-6421738)
chr2 (196-236)||(3672773-3672813)
chr2 (188-228)||(35580494-35580534)
chr2 (178-232)||(3673122-3673176)
chr2 (134-172)||(6421314-6421352)
chr2 (178-236)||(25390314-25390372)
chr2 (137-231)||(41678419-41678512)
chr2 (139-186)||(42515031-42515078)
chr2 (166-232)||(30312831-30312897)
chr2 (166-223)||(2336666-2336723)
chr2 (191-236)||(28226404-28226449)
chr2 (124-233)||(33954311-33954419)
[»] chr6 (47 HSPs)
chr6 (116-247)||(29518495-29518626)
chr6 (116-247)||(29518912-29519043)
chr6 (116-247)||(32741171-32741302)
chr6 (116-247)||(3409251-3409382)
chr6 (116-247)||(35210196-35210327)
chr6 (130-257)||(2377760-2377887)
chr6 (116-247)||(2378118-2378249)
chr6 (116-247)||(3058218-3058349)
chr6 (116-255)||(1127352-1127491)
chr6 (116-247)||(3409652-3409783)
chr6 (116-247)||(3415450-3415581)
chr6 (116-247)||(26544041-26544172)
chr6 (116-234)||(14748386-14748504)
chr6 (130-232)||(32460630-32460732)
chr6 (124-247)||(2579907-2580030)
chr6 (130-247)||(16107684-16107801)
chr6 (131-255)||(10074018-10074142)
chr6 (124-236)||(10074409-10074521)
chr6 (117-236)||(1846741-1846860)
chr6 (130-236)||(2578489-2578594)
chr6 (130-247)||(16454913-16455030)
chr6 (130-234)||(9062398-9062501)
chr6 (124-234)||(593757-593867)
chr6 (126-247)||(2843556-2843678)
chr6 (130-255)||(2579519-2579644)
chr6 (130-255)||(6999823-6999948)
chr6 (130-247)||(16454581-16454698)
chr6 (130-232)||(1950235-1950337)
chr6 (124-236)||(10073662-10073772)
chr6 (125-255)||(2578862-2578991)
chr6 (134-255)||(5832054-5832174)
chr6 (130-215)||(16108069-16108154)
chr6 (124-232)||(10911565-10911674)
chr6 (119-232)||(5958653-5958766)
chr6 (134-255)||(2579136-2579253)
chr6 (124-233)||(6071132-6071241)
chr6 (135-236)||(12092528-12092629)
chr6 (124-236)||(8481927-8482038)
chr6 (137-240)||(31714683-31714785)
chr6 (192-238)||(22605299-22605345)
chr6 (144-197)||(35210498-35210551)
chr6 (192-238)||(21130101-21130147)
chr6 (139-232)||(2975567-2975660)
chr6 (161-207)||(14789279-14789325)
chr6 (124-233)||(12085083-12085191)
chr6 (192-236)||(11637767-11637811)
chr6 (130-232)||(17135119-17135221)
[»] chr4 (90 HSPs)
chr4 (124-255)||(25483336-25483467)
chr4 (124-255)||(1731672-1731803)
chr4 (116-247)||(50630788-50630919)
chr4 (124-255)||(54017620-54017751)
chr4 (116-252)||(49880152-49880288)
chr4 (116-236)||(55933168-55933288)
chr4 (116-247)||(41370349-41370480)
chr4 (130-255)||(36629243-36629368)
chr4 (124-236)||(52884887-52885000)
chr4 (124-247)||(52884695-52884819)
chr4 (139-247)||(54108928-54109035)
chr4 (124-247)||(3340807-3340930)
chr4 (124-255)||(22027986-22028117)
chr4 (130-250)||(49302910-49303032)
chr4 (133-255)||(44620362-44620484)
chr4 (124-233)||(4955364-4955473)
chr4 (114-250)||(6975486-6975622)
chr4 (121-236)||(50002423-50002538)
chr4 (130-236)||(34646693-34646799)
chr4 (139-253)||(45496820-45496934)
chr4 (124-233)||(2741071-2741180)
chr4 (130-255)||(20825842-20825967)
chr4 (130-255)||(39404404-39404529)
chr4 (130-255)||(50459727-50459852)
chr4 (143-236)||(54936215-54936308)
chr4 (124-236)||(10245920-10246031)
chr4 (133-247)||(44621011-44621125)
chr4 (124-233)||(22183311-22183420)
chr4 (130-255)||(39792885-39793010)
chr4 (124-232)||(3244499-3244607)
chr4 (124-236)||(36608705-36608817)
chr4 (124-247)||(44620660-44620782)
chr4 (134-247)||(54343041-54343147)
chr4 (142-236)||(18932793-18932887)
chr4 (130-236)||(36572025-36572131)
chr4 (124-233)||(2740700-2740809)
chr4 (130-250)||(20826223-20826343)
chr4 (124-247)||(49076864-49076986)
chr4 (130-236)||(41707509-41707614)
chr4 (123-255)||(54108537-54108668)
chr4 (130-255)||(39404024-39404149)
chr4 (124-255)||(3341128-3341259)
chr4 (125-232)||(16888864-16888971)
chr4 (137-232)||(54017750-54017845)
chr4 (124-232)||(32941171-32941279)
chr4 (124-231)||(54741227-54741334)
chr4 (136-247)||(22028402-22028515)
chr4 (124-218)||(49076510-49076604)
chr4 (124-232)||(4390149-4390257)
chr4 (125-236)||(16889580-16889691)
chr4 (135-213)||(10246358-10246436)
chr4 (124-232)||(34004633-34004739)
chr4 (130-255)||(43174512-43174638)
chr4 (124-225)||(51768115-51768216)
chr4 (177-233)||(31691205-31691261)
chr4 (132-255)||(19504713-19504827)
chr4 (116-175)||(50788088-50788147)
chr4 (130-255)||(40067049-40067175)
chr4 (132-190)||(44620304-44620362)
chr4 (178-255)||(23817706-23817783)
chr4 (124-233)||(28034229-28034338)
chr4 (145-236)||(48111742-48111833)
chr4 (130-236)||(760195-760300)
chr4 (178-232)||(3271841-3271895)
chr4 (124-193)||(3700365-3700434)
chr4 (170-232)||(18879852-18879914)
chr4 (124-190)||(44621426-44621492)
chr4 (130-232)||(45489380-45489481)
chr4 (191-236)||(11197293-11197338)
chr4 (130-231)||(15841034-15841134)
chr4 (124-212)||(11348396-11348484)
chr4 (124-232)||(23556914-23557022)
chr4 (166-232)||(15841416-15841482)
chr4 (137-234)||(34544119-34544217)
chr4 (126-236)||(45489758-45489868)
chr4 (130-190)||(44620950-44621011)
chr4 (164-236)||(43827480-43827551)
chr4 (190-238)||(51681604-51681652)
chr4 (192-231)||(1868119-1868158)
chr4 (191-234)||(10396483-10396526)
chr4 (191-236)||(10396198-10396243)
chr4 (178-242)||(2891860-2891924)
chr4 (182-233)||(11706591-11706641)
chr4 (149-200)||(39699026-39699077)
chr4 (179-222)||(45484774-45484817)
chr4 (113-147)||(18933103-18933137)
chr4 (191-236)||(922485-922530)
chr4 (187-232)||(11783601-11783646)
chr4 (116-153)||(18932887-18932924)
chr4 (187-220)||(29802604-29802637)
[»] scaffold0702 (2 HSPs)
scaffold0702 (130-257)||(539-666)
scaffold0702 (116-194)||(230-308)
[»] chr8 (72 HSPs)
chr8 (116-247)||(3669679-3669810)
chr8 (116-247)||(3670052-3670183)
chr8 (116-255)||(20870600-20870741)
chr8 (116-247)||(30441073-30441208)
chr8 (130-255)||(3038317-3038442)
chr8 (131-255)||(34835216-34835340)
chr8 (132-255)||(33113394-33113517)
chr8 (130-255)||(34834882-34835007)
chr8 (131-255)||(70301-70425)
chr8 (130-247)||(147457-147574)
chr8 (124-236)||(45122103-45122215)
chr8 (130-236)||(30359277-30359383)
chr8 (116-232)||(1013921-1014037)
chr8 (116-236)||(1014291-1014411)
chr8 (136-232)||(5420663-5420759)
chr8 (124-236)||(9309355-9309467)
chr8 (134-247)||(18372029-18372142)
chr8 (131-255)||(34835481-34835606)
chr8 (131-255)||(34835747-34835872)
chr8 (130-243)||(37544529-37544642)
chr8 (124-233)||(45121959-45122068)
chr8 (138-255)||(45122638-45122755)
chr8 (124-255)||(6876889-6877021)
chr8 (149-236)||(9483233-9483320)
chr8 (130-232)||(25561865-25561968)
chr8 (132-234)||(1513963-1514065)
chr8 (124-246)||(9608745-9608867)
chr8 (130-232)||(40518588-40518690)
chr8 (130-255)||(30359615-30359740)
chr8 (131-247)||(9482639-9482755)
chr8 (131-236)||(18371707-18371807)
chr8 (130-255)||(40518075-40518202)
chr8 (116-255)||(6731896-6732026)
chr8 (124-255)||(8918791-8918922)
chr8 (118-236)||(40579552-40579670)
chr8 (130-236)||(43274825-43274931)
chr8 (130-235)||(18380064-18380169)
chr8 (124-229)||(9308977-9309084)
chr8 (124-255)||(41972158-41972292)
chr8 (116-202)||(41416251-41416335)
chr8 (124-228)||(45123006-45123108)
chr8 (130-236)||(8794117-8794223)
chr8 (118-250)||(32305478-32305603)
chr8 (130-252)||(32640562-32640679)
chr8 (147-255)||(9609108-9609216)
chr8 (130-232)||(18372656-18372754)
chr8 (130-228)||(18372988-18373083)
chr8 (141-232)||(45121706-45121797)
chr8 (130-196)||(18372785-18372851)
chr8 (124-233)||(4154715-4154824)
chr8 (131-247)||(6651510-6651617)
chr8 (161-233)||(9507819-9507891)
chr8 (124-247)||(5915872-5915990)
chr8 (130-196)||(18372342-18372408)
chr8 (137-214)||(3037776-3037853)
chr8 (124-236)||(147829-147932)
chr8 (134-197)||(25561729-25561792)
chr8 (130-229)||(20130455-20130553)
chr8 (130-238)||(43398112-43398223)
chr8 (124-232)||(4154331-4154438)
chr8 (124-236)||(12283873-12283984)
chr8 (124-219)||(9620739-9620834)
chr8 (130-168)||(18372485-18372523)
chr8 (160-216)||(18373236-18373292)
chr8 (195-238)||(12156702-12156745)
chr8 (166-223)||(40991795-40991852)
chr8 (132-232)||(5274783-5274883)
chr8 (199-247)||(40579304-40579352)
chr8 (201-236)||(20995462-20995497)
chr8 (206-255)||(8919171-8919220)
chr8 (182-223)||(11442911-11442952)
chr8 (202-255)||(41129066-41129119)
[»] chr3 (75 HSPs)
chr3 (116-247)||(22304561-22304692)
chr3 (116-236)||(39389062-39389182)
chr3 (124-233)||(33803301-33803410)
chr3 (130-247)||(35946528-35946645)
chr3 (130-255)||(37991004-37991129)
chr3 (130-247)||(43346826-43346943)
chr3 (124-255)||(29644608-29644739)
chr3 (124-255)||(29644929-29645060)
chr3 (116-250)||(4823647-4823781)
chr3 (130-252)||(37990669-37990791)
chr3 (124-255)||(15772854-15772985)
chr3 (116-255)||(39934982-39935123)
chr3 (124-236)||(12114608-12114720)
chr3 (124-232)||(25739475-25739583)
chr3 (124-255)||(32589704-32589834)
chr3 (124-255)||(54017843-54017974)
chr3 (130-232)||(52634682-52634783)
chr3 (131-247)||(3135108-3135224)
chr3 (124-236)||(8327904-8328016)
chr3 (124-232)||(42342438-42342546)
chr3 (124-255)||(54018225-54018356)
chr3 (124-232)||(15773192-15773300)
chr3 (143-255)||(41359792-41359904)
chr3 (124-230)||(21832395-21832501)
chr3 (130-247)||(32462935-32463053)
chr3 (115-208)||(51886552-51886645)
chr3 (124-245)||(53577364-53577485)
chr3 (116-247)||(50612482-50612618)
chr3 (130-247)||(22303990-22304100)
chr3 (124-236)||(45395699-45395811)
chr3 (124-230)||(1634366-1634473)
chr3 (124-247)||(31190017-31190132)
chr3 (130-236)||(49336733-49336839)
chr3 (124-236)||(39914252-39914364)
chr3 (130-249)||(45901719-45901839)
chr3 (124-247)||(42342125-42342248)
chr3 (125-236)||(53118021-53118131)
chr3 (134-236)||(42584868-42584970)
chr3 (130-233)||(32462607-32462711)
chr3 (130-232)||(33175711-33175816)
chr3 (115-197)||(37726495-37726577)
chr3 (182-243)||(22303698-22303759)
chr3 (130-247)||(25755400-25755517)
chr3 (124-236)||(9240149-9240261)
chr3 (150-226)||(33362349-33362425)
chr3 (116-231)||(3384317-3384432)
chr3 (130-236)||(11661957-11662064)
chr3 (116-175)||(22304238-22304297)
chr3 (130-191)||(11661541-11661602)
chr3 (124-233)||(47964567-47964676)
chr3 (132-216)||(7767380-7767464)
chr3 (130-236)||(3135500-3135613)
chr3 (124-221)||(44160605-44160702)
chr3 (130-238)||(46546369-46546477)
chr3 (124-231)||(39336280-39336387)
chr3 (124-233)||(47964964-47965073)
chr3 (177-234)||(52634993-52635050)
chr3 (124-180)||(43346650-43346706)
chr3 (179-237)||(17731949-17732007)
chr3 (179-237)||(19033180-19033238)
chr3 (194-236)||(54017594-54017636)
chr3 (130-234)||(25991409-25991513)
chr3 (191-236)||(53596027-53596072)
chr3 (191-236)||(53596342-53596387)
chr3 (166-233)||(12749211-12749278)
chr3 (191-242)||(48127855-48127906)
chr3 (192-238)||(16871003-16871049)
chr3 (192-238)||(17735035-17735081)
chr3 (192-238)||(19036304-19036350)
chr3 (166-236)||(39336016-39336086)
chr3 (191-236)||(53596542-53596587)
chr3 (195-238)||(16869841-16869884)
chr3 (191-237)||(16143505-16143551)
chr3 (130-236)||(25317164-25317270)
chr3 (207-236)||(11661603-11661632)
[»] chr7 (59 HSPs)
chr7 (124-236)||(7517580-7517692)
chr7 (118-246)||(29157559-29157687)
chr7 (124-255)||(1085643-1085774)
chr7 (116-247)||(37533046-37533176)
chr7 (124-245)||(23414-23535)
chr7 (124-253)||(7554025-7554154)
chr7 (124-255)||(36939760-36939891)
chr7 (124-233)||(22566711-22566820)
chr7 (131-247)||(11845198-11845314)
chr7 (116-236)||(14681502-14681622)
chr7 (127-255)||(19122735-19122862)
chr7 (130-236)||(30244276-30244382)
chr7 (134-236)||(6054570-6054672)
chr7 (130-236)||(30245083-30245189)
chr7 (130-236)||(47129101-47129207)
chr7 (115-236)||(37533410-37533531)
chr7 (130-255)||(45754722-45754846)
chr7 (124-247)||(22567074-22567196)
chr7 (124-236)||(16569196-16569308)
chr7 (124-236)||(16596354-16596466)
chr7 (132-247)||(24177443-24177558)
chr7 (124-235)||(36622960-36623071)
chr7 (124-247)||(40094809-40094932)
chr7 (130-236)||(34218080-34218186)
chr7 (134-232)||(45434646-45434744)
chr7 (124-245)||(40230328-40230449)
chr7 (130-247)||(45433247-45433364)
chr7 (139-243)||(1085287-1085391)
chr7 (124-255)||(8128468-8128599)
chr7 (130-246)||(9901651-9901765)
chr7 (124-233)||(118350-118459)
chr7 (134-255)||(24838728-24838850)
chr7 (130-232)||(30032573-30032675)
chr7 (136-233)||(36534833-36534930)
chr7 (130-219)||(41910657-41910746)
chr7 (124-212)||(28301613-28301701)
chr7 (124-225)||(43241495-43241596)
chr7 (130-247)||(20599320-20599439)
chr7 (166-236)||(30253534-30253604)
chr7 (124-197)||(30245494-30245567)
chr7 (124-197)||(30255339-30255412)
chr7 (132-232)||(41854643-41854742)
chr7 (124-194)||(30244701-30244771)
chr7 (124-192)||(36109007-36109075)
chr7 (130-229)||(44361517-44361615)
chr7 (170-233)||(28300302-28300366)
chr7 (145-247)||(37167808-37167904)
chr7 (191-236)||(21416187-21416232)
chr7 (193-232)||(23569052-23569091)
chr7 (191-236)||(21619091-21619136)
chr7 (118-161)||(14681281-14681324)
chr7 (178-236)||(4124134-4124192)
chr7 (192-238)||(27391813-27391859)
chr7 (166-232)||(37345960-37346026)
chr7 (124-174)||(40094502-40094552)
chr7 (205-247)||(47129450-47129492)
chr7 (192-255)||(40094440-40094503)
chr7 (207-255)||(28300595-28300644)
chr7 (130-167)||(36967344-36967381)
[»] scaffold0391 (3 HSPs)
scaffold0391 (130-255)||(1133-1258)
scaffold0391 (171-236)||(1737-1802)
scaffold0391 (130-176)||(3091-3137)
[»] scaffold0078 (2 HSPs)
scaffold0078 (124-236)||(5357-5469)
scaffold0078 (124-255)||(4982-5113)
[»] scaffold0734 (2 HSPs)
scaffold0734 (124-214)||(5777-5867)
scaffold0734 (124-247)||(5396-5520)
[»] scaffold0171 (1 HSPs)
scaffold0171 (124-236)||(17500-17614)
[»] scaffold0027 (1 HSPs)
scaffold0027 (124-247)||(47360-47483)
[»] scaffold0504 (1 HSPs)
scaffold0504 (130-201)||(10192-10263)


Alignment Details
Target: chr5 (Bit Score: 462; Significance: 0; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 462; E-Value: 0
Query Start/End: Original strand, 333 - 805
Target Start/End: Original strand, 41170889 - 41171359
Alignment:
Q  333 tacggaggataatactatgctttgtgcataactttttgatagtgctccaggtccgatggttttagtggtaactttttgggatattatttctacgtatgtt 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41170889 tacggaggataatactatgctttgtgcataactttttgatagtgctccaggtccgatggttttagtggtaactttttgggatattatttctacgtatgtt 41170988  T
Q  433 aagctgctgaataacatcaattccaacatgttggtgttaatccctgaaaagccaggatatatgatgctttgcaagattttcgtccctttaggttggctgc 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  41170989 aagctgctgaataacatcaattccaacatgttggtgttaatccctgaaaagccaggatat--gatgctttgcaagattttcgtccctttaggttggctgc 41171086  T
Q  533 tatttgctcctaaggtttcgttccaaggaaggaaaatttctgactgtattaatgttcttcatagaaaattttgattttgatcatcataaaaactatgatt 632  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41171087 tatttgctcctaaggtttcgttccaaggaaggaaaatttctgactgtattaatgttcttcatagaaaattttgattttgatcatcataaaaactatgatt 41171186  T
Q  633 atgcttcaagtaaacagagcaatattcattcacttaaaattatccaaacgactttgcaacatggtcacactcacaccaggtttgacccatggcaatgcaa 732  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41171187 atgcttcaagtaaacagagcaatattcattcacttaaaattatccaaacgactttgcaacatggtcacactcacaccaggtttgacccatggcaatgcaa 41171286  T
Q  733 gttcagctatttagaaactaaaccaatcatatgcttagattaagattaaagttcagctatctaaaaattatgt 805  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41171287 gttcagctatttagaaactaaaccaatcatatgcttagattaagattaaagttcagctatctaaaaattatgt 41171359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 41170627 - 41170765
Alignment:
Q  117 gttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggt 216  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41170627 gttggtttgtaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggt 41170726  T
Q  217 tttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  41170727 tttgggtaagagtgtggtgtttttcttgcttgtgtggtt 41170765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 32487386 - 32487524
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  32487386 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacct-ataagtaagaggacccataaacccattgccttaagg 32487484  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||||||||  || | ||||||||||||||||    
T  32487485 ttttgggtaagagtgtgacgtatctcttgcttatgtggtt 32487524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 114 - 247
Target Start/End: Original strand, 6500441 - 6500573
Alignment:
Q  114 aatgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 213  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||    
T  6500441 aatgttggtttgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaa 6500539  T
Q  214 ggttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||||| | ||||||||    
T  6500540 ggttttgggtaagagtgtggtgtctctcttgctt 6500573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 9498820 - 9498684
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  9498820 tgttggtttgcaaatgtgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaga 9498721  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtg 252  Q
    ||||||||||||||||||||| | ||||| |||||||    
T  9498720 ttttgggtaagagtgtggtgtctctcttgtttatgtg 9498684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 40296473 - 40296350
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  40296473 tgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgggt 40296374  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||| | ||||||||    
T  40296373 aagagtgtggtgtctctcttgctt 40296350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 116 - 254
Target Start/End: Complemental strand, 18603286 - 18603148
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    |||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  18603286 tgttagttttcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 18603187  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtggt 254  Q
    ||||||||||||||||||  | | |||||||| ||||||    
T  18603186 ttttgggtaagagtgtggcatctctcttgcttgtgtggt 18603148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 15370099 - 15370222
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||||||    
T  15370099 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggt 15370198  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||| | ||||||||    
T  15370199 aagagtgtggtgtctctcttgctt 15370222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 27502202 - 27502063
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||     
T  27502202 tgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaaga 27502103  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||| ||||| |||||||||| | |||||||| |||||||    
T  27502102 tttttggtaaaagtgtggtgtctctcttgcttgtgtggtt 27502063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 13415918 - 13415795
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  13415918 tgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggttttgggt 13415819  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    |||||||||| || | ||||||||    
T  13415818 aagagtgtggcgtctctcttgctt 13415795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 26074618 - 26074724
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26074618 tgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 26074717  T
Q  230 gtggtgt 236  Q
    |||||||    
T  26074718 gtggtgt 26074724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 36492378 - 36492244
Alignment:
Q  121 gtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttg 220  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||| |||| |||| ||||||||    
T  36492378 gtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttaggttttg 36492279  T
Q  221 ggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    | |||||||||||||| | |||||||| |||||||    
T  36492278 gataagagtgtggtgtctctcttgcttgtgtggtt 36492244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 624188 - 624308
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||||| |||    
T  624188 tgttggtttgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgagg 624287  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||    
T  624288 ttttgggtaagagtgtggtgt 624308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 6500815 - 6500934
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| |||||||||||||    
T  6500815 tgttggtttgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaagg 6500913  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    |||||| ||||||||||||||    
T  6500914 ttttggataagagtgtggtgt 6500934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 3295172 - 3295042
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  3295172 tgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggttttgggt 3295074  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    | ||||||||||| | ||||| || |||||||    
T  3295073 atgagtgtggtgtctctcttggttgtgtggtt 3295042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 12662810 - 12662687
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||| |||||| ||||||||    
T  12662810 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaagaaaacccataaatccattgtcttaagtttttgggt 12662711  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||  ||||||||||    
T  12662710 aagagtgtggtgcctttcttgctt 12662687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 11417128 - 11417027
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  11417128 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtg 11417029  T
Q  231 tg 232  Q
    ||    
T  11417028 tg 11417027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 26074304 - 26074192
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||||||| || ||| |||||||||||||| |||||||||||||||||||||||||    
T  26074304 tgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttgggt 26074205  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  26074204 aagagtgtggtgt 26074192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 25327941 - 25328056
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  25327941 tgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagt 25328040  T
Q  230 gtggtgtttttcttgc 245  Q
    ||||||| | ||||||    
T  25328041 gtggtgtctctcttgc 25328056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 137 - 255
Target Start/End: Complemental strand, 3295489 - 3295372
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||    
T  3295489 tatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggtttt-ggtaagagtgtgttgt 3295391  T
Q  237 ttttcttgcttatgtggtt 255  Q
     | |||||||| |||||||    
T  3295390 ctctcttgcttgtgtggtt 3295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 6224202 - 6224307
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  6224202 tgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttttggtaagagt 6224301  T
Q  230 gtggtg 235  Q
    ||||||    
T  6224302 gtggtg 6224307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 299490 - 299598
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggta 224  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| ||| |||||||||||||| |||    
T  299490 gcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggttttgtgta 299589  T
Q  225 agagtgtgg 233  Q
    |||||||||    
T  299590 agagtgtgg 299598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 130 - 225
Target Start/End: Complemental strand, 26075314 - 26075219
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaa 225  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26075314 tgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaa 26075219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 41632782 - 41632905
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| ||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  41632782 tgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggt 41632881  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||| | ||||||||    
T  41632882 aagagtgtggtgtctctcttgctt 41632905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 121 - 255
Target Start/End: Complemental strand, 29549416 - 29549282
Alignment:
Q  121 gtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttg 220  Q
    |||||||| |||||||||||||| ||| ||| |||||||||||||||| |||||| | ||||||||||| ||||||||||| |||| |||||||||||||    
T  29549416 gtttgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaacacattaccttaaggttttg 29549317  T
Q  221 ggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    | ||||||||||| || | ||||||||||||||||    
T  29549316 gataagagtgtggcgtctctcttgcttatgtggtt 29549282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 42405748 - 42405642
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||| | ||||||||||||||||||||||||    
T  42405748 tgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgggtaagagt 42405649  T
Q  230 gtggtgt 236  Q
    |||||||    
T  42405648 gtggtgt 42405642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 35150007 - 35150118
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||    
T  35150007 tgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga-gacccataaatccattgtcttaaggttttgggt 35150105  T
Q  224 aagagtgtggtgt 236  Q
    || ||||||||||    
T  35150106 aaaagtgtggtgt 35150118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 34753173 - 34753060
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||||||||| ||||| || |||||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  34753173 agttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtgg 34753074  T
Q  234 tgtttttcttgctt 247  Q
     || | ||||||||    
T  34753073 cgtctctcttgctt 34753060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 36568725 - 36568616
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||| || |||||| |||||||| ||||||||| ||| ||||| ||||||||||||||||||||||| |||    
T  36568725 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttggt 36568626  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  36568625 aagagtgtgg 36568616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 41170474 - 41170550
Alignment:
Q  11 tcatggttagagttatggcaggggaagctcctggaataaagtcaccgattaatgtatttggactttactcttaaaca 87  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41170474 tcatggttagagttatggctggggaagctcctggaataaagtcaccgattaatgtatttggactttactcttaaaca 41170550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 136 - 255
Target Start/End: Original strand, 33747783 - 33747902
Alignment:
Q  136 ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtg 235  Q
    ||||||||||||||||||||||||||||||||||| || |  ||||||||||||||| |||||||| |||||||||||| |||||| |||||||||||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtg 33747882  T
Q  236 tttttcttgcttatgtggtt 255  Q
    | | |||| |||||| ||||    
T  33747883 tctctcttccttatgcggtt 33747902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 623810 - 623930
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||  ||| |||||||  || ||||||||  || |||||||||    
T  623810 tgttggtttgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaagg 623909  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    ||||| |||||||||||||||    
T  623910 ttttgagtaagagtgtggtgt 623930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 26074934 - 26074830
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt-aagag 228  Q
    |||||||||||||||||||||||||||||| |||||||||||||||   |||||||| ||||||||||||||| |||| ||||||||||||||| |||||    
T  26074934 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggacccataaacctattgtcttaaggttttgggtaaagag 26074835  T
Q  229 tgtgg 233  Q
    |||||    
T  26074834 tgtgg 26074830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 1028669 - 1028566
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||||||| || |||||||| ||||||  ||||||||||||||||||||||||| ||  |||||||||||| |||||||||    
T  1028669 tgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaagagt 1028570  T
Q  230 gtgg 233  Q
    ||||    
T  1028569 gtgg 1028566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 38427554 - 38427655
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||||| || |||||| |||||||||||| ||||||||    
T  38427554 tgtgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataagt-agaggacccattaatccattgtcttaaggttttgtgtaagagt 38427652  T
Q  230 gtg 232  Q
    |||    
T  38427653 gtg 38427655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 5723957 - 5723826
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||  ||||| ||||||| |||||| ||   |||| |||||||    
T  5723957 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccattaatttattgtcttaagg 5723858  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||| |||||| | |||| | ||||||||    
T  5723857 ttttgggaaagagtatagtgtctctcttgctt 5723826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 42508618 - 42508707
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    ||||| |||||| |||||||||||||| || |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||    
T  42508618 tgtgaattatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaacccattgccttaaggtttt 42508707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 150 - 233
Target Start/End: Original strand, 15370428 - 15370511
Alignment:
Q  150 tcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||||| ||| |||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  15370428 tcggatgaaacagtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtgg 15370511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 130 - 231
Target Start/End: Original strand, 2411013 - 2411114
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| |||| ||||| |  |||||| |||||||||||| |||||||||| ||||||||||  ||||||||||||||||| ||||||||    
T  2411013 tgtgagttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaacttattgccttaaggttttgagtaagagt 2411112  T
Q  230 gt 231  Q
    ||    
T  2411113 gt 2411114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 35914857 - 35914974
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||| ||||| |||| |||||||| |||  | |||| ||||| |||    
T  35914857 tgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacccgtaaatccattgccctaaattattggataagaatgt 35914956  T
Q  232 ggtgtttttcttgcttat 249  Q
    ||| | | ||||||||||    
T  35914957 ggtatctctcttgcttat 35914974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 24489356 - 24489255
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||| |||| || || ||||||| |||| ||||| |||||||  ||||||||||||||||||||||| ||||| ||||||||    
T  24489356 tgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga--acccataaacccattgccttaagattttgcgtaagagt 24489259  T
Q  230 gtgg 233  Q
    ||||    
T  24489258 gtgg 24489255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 36522053 - 36521946
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca-tcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    |||| |||||||||||||||||||||| |||| || |||  |||||||||| |||| ||| | |||||||||||||||| ||||||||||||||||||||    
T  36522053 gcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacactctt-taaatgagaggacccataaaccaattgccttaaggttttgggt 36521955  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  36521954 aagagtgtg 36521946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 7768842 - 7768925
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataa 199  Q
    ||||||||| ||| |||||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  7768842 tgttggttttcaagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaaaaggacccataa 7768925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 36522389 - 36522283
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| ||||| ||||| || | |  | ||||||||| |||||||| |||||||| |||||||||||  |||||||||||||||||||||    
T  36522389 tgtgagttatatgtctcacattggatagaaaaatggaagttgaacattttataagtgagaggaccaataaacccattatcttaaggttttgggtaagagt 36522290  T
Q  230 gtggtgt 236  Q
    |||||||    
T  36522289 gtggtgt 36522283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 300965 - 301080
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||| | ||||||||||||||        || ||||||||||||| |||| |||||||||    
T  300965 tgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag--------aatccattgccttaagatttttggtaagagt 301056  T
Q  230 gtggtgtttttcttgcttatgtgg 253  Q
    ||||||| | |||||||| |||||    
T  301057 gtggtgtctctcttgcttgtgtgg 301080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 130 - 204
Target Start/End: Original strand, 26074324 - 26074398
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaaccca 204  Q
    |||||||||||||||||||||| |||| || | ||||| ||||||| ||||||||||||||||||||||||||||    
T  26074324 tgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaaccca 26074398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 26591068 - 26590959
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||| |||| ||| |||| ||  || ||||||||||||||| |||||||||||||||| |||||||  || ||||||||||||||| ||    
T  26591068 tgcaagtgtgatttaaatgttccatatcgaatcgaaaagtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagt 26590969  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  26590968 aagagtgtgg 26590959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 132 - 232
Target Start/End: Complemental strand, 35167988 - 35167888
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||| | || |||||| ||||||| ||||||||||||||| |||||||||| || |||||||||| | |||||||| | ||||| |||||||||||    
T  35167988 tgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaatctattgccttgatgtttttggtaagagtgt 35167889  T
Q  232 g 232  Q
    |    
T  35167888 g 35167888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 31509623 - 31509718
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    ||||| ||||||||||||||| ||||||||||| || |||  ||||||| ||  |||||||| ||||||| ||||||| ||||||||| |||||||    
T  31509623 tgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgccttgaggtttt 31509718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 231
Target Start/End: Complemental strand, 41635341 - 41635242
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    ||||||||||||  | |||| ||||||| |||||| |||||||| ||||||| |||||||| ||||||| |||||| |||||  |||| |||||||||||    
T  41635341 tgagttatatgtttcccatcagataaaagagtaaatgttgaacaccttataaataagaggatccataaatccattgtcttaaaattttaggtaagagtgt 41635242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 13042606 - 13042651
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  13042606 gacccataaacccattgccttaaggttttggataagagtgtggtgt 13042651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 39309692 - 39309764
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccat 205  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||  |||||| |||||||| ||||||||||||    
T  39309692 tgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataagagga-ccataaacccat 39309764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 42524723 - 42524811
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    ||||| ||||||||| ||||||||||| || ||||||| ||||||||||||| | ||||||||| |||||| |||||| || ||||||||    
T  42524723 tgtgaattatatgtctcacatcggatagaaaagtaaag-ttgaacatcttatgaataagaggactcataaatccattgtctgaaggtttt 42524811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 13112604 - 13112655
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttct 242  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||| |||||    
T  13112604 gacccataaacccattgtcttaaggttttggataagagtgtggtgtctttct 13112655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 5660289 - 5660338
Alignment:
Q  115 atgttggtttgcaattgtgagttatatgtcccacatcggataaaatagta 164  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  5660289 atgttggtttgcaaatgtgagttatatgttccacatcgaataaaatagta 5660338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 41168525 - 41168573
Alignment:
Q  8 gtatcatggttagagttatggcaggggaagctcctggaataaagtcacc 56  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  41168525 gtatcaaggttagagttattgcaggggaagctcttggaataaagtcacc 41168573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 236
Target Start/End: Original strand, 31509745 - 31509844
Alignment:
Q  138 atatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg-ttttgggtaagagtgtggtgt 236  Q
    ||||||| ||||||||||| || |||  ||||||| ||  |||||||| ||||||| ||||||| ||||||||| ||| |||| ||||||| ||||||||    
T  31509745 atatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaactcattgccttgaggttttttggtaagaatgtggtgt 31509844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 41168747 - 41168798
Alignment:
Q  252 ggttttgggatggtctagaggcatggaataaatattctaagatacttagatt 303  Q
    ||||| ||||||||||||||||||||||||| | ||||||| ||||||||||    
T  41168747 ggtttggggatggtctagaggcatggaataattcttctaaggtacttagatt 41168798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 13786136 - 13786051
Alignment:
Q  146 cacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||||||||||||| ||| | |||||||||  |||||||||||| ||||| |||| | |||| |||||| |||||| ||||||||||    
T  13786136 cacatcggataaaa-agtgatggttgaacactttataagtaagatgacccgtaaatctattgtcttaagattttggataagagtgtg 13786051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 32445943 - 32445997
Alignment:
Q  182 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||| ||||||||||||||||||  ||||||||||||||||| | ||||||||||    
T  32445943 aagtgagaggacccataaacccaacgccttaaggttttgggttaaagtgtggtgt 32445997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 254 - 287
Target Start/End: Original strand, 41170808 - 41170841
Alignment:
Q  254 ttttgggatggtctagaggcatggaataaatatt 287  Q
    ||||||||||||||||||||||||||||||||||    
T  41170808 ttttgggatggtctagaggcatggaataaatatt 41170841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 5963765 - 5963797
Alignment:
Q  206 tgccttaaggttttgggtaagagtgtggtgttt 238  Q
    |||||||||||||||||||||||||||||||||    
T  5963765 tgccttaaggttttgggtaagagtgtggtgttt 5963797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 6225052 - 6225104
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataag 184  Q
    |||||||||| ||||||||| ||||||| | ||||||||||||| ||||||||    
T  6225052 tgagttatatatcccacatcagataaaagaataaaggttgaacaccttataag 6225104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 19275566 - 19275637
Alignment:
Q  161 agtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||| |||||||||| |||||||| |||| ||||||||||  ||||| |||||| |||||||||||| |||||    
T  19275566 agtagaggttgaaca-cttataaggaagaagacccataaattcattgtcttaagattttgggtaagattgtgg 19275637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 34103625 - 34103668
Alignment:
Q  195 cataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||    
T  34103625 cataaactcattgccttaaggttttgaataagagtgtggtgttt 34103668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 36389067 - 36389020
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||||||| || ||||||| |||||||||| ||||||||||||||    
T  36389067 gacccataaactcagtgccttagggttttgggtcagagtgtggtgttt 36389020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 36527196 - 36527145
Alignment:
Q  181 taagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||| |||||| |||||||| |||||||||||| |||||| ||||||||||    
T  36527196 taagtgagaggatccataaacgcattgccttaagattttggataagagtgtg 36527145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 35150747 - 35150789
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaa 166  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  35150747 tgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 166
Target Start/End: Original strand, 35151038 - 35151080
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaa 166  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||    
T  35151038 tgcaagtgtgagttatatgtcccacatcgaataaaagagtaaa 35151080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 41341523 - 41341569
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||| || ||||||||||||||||| ||||||| ||||||||||    
T  41341523 acccatacactcattgccttaaggtttttggtaagaatgtggtgttt 41341569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 247
Target Start/End: Complemental strand, 26900089 - 26900052
Alignment:
Q  210 ttaaggttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  26900089 ttaaggttttgggtaagagtgtggtgtctctcttgctt 26900052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 6e-61; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 44290624 - 44290493
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44290624 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 44290525  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||| |||||| ||||||||||    
T  44290524 ttttgggtaagagtatggtgtctttcttgctt 44290493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 44290991 - 44290859
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44290991 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 44290892  T
Q  216 ttttgggt-aagagtgtggtgtttttcttgctt 247  Q
    |||||||| ||||||||||||| | ||||||||    
T  44290891 ttttgggtaaagagtgtggtgtatctcttgctt 44290859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 41759475 - 41759614
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| || ||||||| ||||||||||||||    
T  41759475 tgttggtttgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaagg 41759574  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  41759575 ttttgggtaagagtgtggtgtctctcttgcttatgtggtt 41759614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 116 - 246
Target Start/End: Original strand, 3550712 - 3550842
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    |||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |    
T  3550712 tgttggttggcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaag 3550811  T
Q  216 ttttgggtaagagtgtggtgtttttcttgct 246  Q
    ||||||||||||||||||||| | |||||||    
T  3550812 ttttgggtaagagtgtggtgtctctcttgct 3550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 17294583 - 17294703
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17294583 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 17294682  T
Q  230 gtggtgtttttcttgcttatg 250  Q
    ||||||| | ||| |||||||    
T  17294683 gtggtgtctctctcgcttatg 17294703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 50052189 - 50052053
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| |    
T  50052189 tgttggtttttaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacctattttcttaaag 50052090  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtg 252  Q
    ||||||||||||||||||||| | ||||| |||||||    
T  50052089 ttttgggtaagagtgtggtgtctctcttgtttatgtg 50052053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 32594880 - 32594762
Alignment:
Q  118 ttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtt 217  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  32594880 ttggtttgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggtt 32594781  T
Q  218 ttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||    
T  32594780 ttgggtaagagtgtggtgt 32594762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 34364925 - 34365051
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  34364925 tgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggt 34365024  T
Q  224 aagagtgtggtgtttttcttgcttatg 250  Q
    ||||||||||||| | ||| |||||||    
T  34365025 aagagtgtggtgtctctctcgcttatg 34365051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 37556117 - 37556242
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaa-tagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  37556117 tgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagaggacc-ataaacccatagccttaaggttttgggtaagag 37556215  T
Q  229 tgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||| | |||||||| |||||||    
T  37556216 tgtggtgtctctcttgcttgtgtggtt 37556242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 41157375 - 41157506
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||    
T  41157375 tgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttaggttttgagt 41157474  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | |||||||| |||||||    
T  41157475 aagagtgtggtgtctgtcttgcttgtgtggtt 41157506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 26661674 - 26661549
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  26661674 tgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaagagt 26661575  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | ||| |||| |||||||    
T  26661574 gtggtgtctctctcgcttgtgtggtt 26661549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 41142372 - 41142504
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||    
T  41142372 tgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttttggt 41142471  T
Q  224 -aagagtgtggtgtttttcttgcttatgtggtt 255  Q
     |||||||||| || | |||||||| |||||||    
T  41142472 aaagagtgtggcgtctctcttgcttgtgtggtt 41142504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 3537765 - 3537634
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    |||||||||| |  ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||| |||||||    
T  3537765 tgttggtttgtacgtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaagg 3537666  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||||||| || | ||||||||    
T  3537665 ttttgggtaagagtgtggcgtctctcttgctt 3537634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 34364507 - 34364638
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| |||||||||||||||||    
T  34364507 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgggt 34364606  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||| ||| | ||| ||||||| ||||    
T  34364607 aagagtgtgatgtctctctcgcttatgcggtt 34364638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 29798199 - 29798320
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |    
T  29798199 tgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggat 29798298  T
Q  224 aagagtgtggtgtttttcttgc 245  Q
    ||||||||||||| | ||||||    
T  29798299 aagagtgtggtgtctctcttgc 29798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 48588654 - 48588534
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||  |||||||||||||    
T  48588654 tgttggtttgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaagg 48588555  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||| |||||    
T  48588554 ttttgggtaagagtgcggtgt 48588534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 5320123 - 5319992
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| |||||||||||| || |||||| |||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  5320123 tgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggt 5320024  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||| |||| | ||||||||||||||||    
T  5320023 aagagtgtagtgtctctcttgcttatgtggtt 5319992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 41156991 - 41157122
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| |||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  41156991 tgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgggt 41157090  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | | |||||| |||||||    
T  41157091 aagagtgtggtgtctctattgcttgtgtggtt 41157122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 26662050 - 26661925
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||| ||||| ||| ||||||| ||||||||||||||| ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||    
T  26662050 tgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggtaagagt 26661951  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  26661950 gtggtgtctctcttgcttgtgtggtt 26661925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 14318875 - 14318979
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||||||||||||||||    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgt 14318974  T
Q  232 ggtgt 236  Q
    |||||    
T  14318975 ggtgt 14318979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 3537313 - 3537226
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaaccc 203  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3537313 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccc 3537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 31767319 - 31767188
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||| ||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||    
T  31767319 tgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggt 31767220  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||  || | |||||||| |||||||    
T  31767219 aagagtgtgacgtctatcttgcttgtgtggtt 31767188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 45494145 - 45494001
Alignment:
Q  116 tgttggtttgcaattgtgagtt-atatgtcccacatcggataaaatagtaaaggttgaacatc----ttataagtaagaggacccataaacccattgcct 210  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |     ||||||||||| || |||||||||||||||||    
T  45494145 tgttggtttgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaacaccatatatataagtaagatgatccataaacccattgcct 45494046  T
Q  211 taaggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||| ||||||| |||||||||||||| | |||| |||||||||||    
T  45494045 taaagttttggataagagtgtggtgtctctcttccttatgtggtt 45494001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 125 - 247
Target Start/End: Original strand, 40082408 - 40082529
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggta 224  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||    
T  40082408 gcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgccttaaggttttgggta 40082506  T
Q  225 agagtgtggtgtttttcttgctt 247  Q
    |||||||||| | | ||||||||    
T  40082507 agagtgtggtatctctcttgctt 40082529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 41184583 - 41184489
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttt 218  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  41184583 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttt 41184489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 22077653 - 22077544
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||    
T  22077653 tgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggt 22077554  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  22077553 aagagtgtgg 22077544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 121 - 247
Target Start/End: Complemental strand, 38804516 - 38804390
Alignment:
Q  121 gtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttg 220  Q
    |||| ||| ||||||||||| ||||||||||| |||||| |||||||||||||||  ||||||||||||||| ||||||||||||  |||||||||||||    
T  38804516 gtttacaagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttg 38804417  T
Q  221 ggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||| |||| | ||||||||    
T  38804416 ggtaagagtgtagtgtctctcttgctt 38804390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 24600472 - 24600360
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||| |||||||| || |||||||||||||||| ||||||||||||| || ||||||| ||||| |||||||||||| ||    
T  24600472 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggttttgtgt 24600373  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  24600372 aagagtgtggtgt 24600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 3875479 - 3875380
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  3875479 agttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtgg 3875380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 9955913 - 9956032
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaata-gtaaaggttgaacatcttataagtaagaggacccat-aaacccattgccttaaggttttgggtaaga 227  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  9955913 tgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaaga 9956012  T
Q  228 gtgtggtgtttttcttgctt 247  Q
    ||||| ||| | ||||||||    
T  9956013 gtgtgatgtctctcttgctt 9956032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 11977286 - 11977401
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||||| || |||||||| | ||||||||||||||||||||||||    
T  11977286 tgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaagagt 11977385  T
Q  230 gtggtgtttttcttgc 245  Q
    ||| ||| | ||||||    
T  11977386 gtgatgtctctcttgc 11977401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 39066358 - 39066227
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||| | |||||||||||| || ||||||||||||||| ||||||| ||||| ||||||||||  ||||| ||||||||||||| |    
T  39066358 tgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaaggttttggat 39066259  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | |||| |||||||||||    
T  39066258 aagagtgtggtgtctctcttacttatgtggtt 39066227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 252
Target Start/End: Complemental strand, 44043943 - 44043802
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaa------aggttgaacatcttataagtaagaggacccataaacccattgcc 209  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||||||||      | |||||||| ||||||||||||| ||||||||||||||||| |    
T  44043943 tgttggtttgcaagtgt-agttatatgtcccacatcgaataaaatagtaatagtaaatgttgaacaccttataagtaagatgacccataaacccattgtc 44043845  T
Q  210 ttaaggttttgggtaagagtgtggtgtttttcttgcttatgtg 252  Q
    ||||| ||||||||||||||||||||| | ||||| |||||||    
T  44043844 ttaagattttgggtaagagtgtggtgtctctcttgtttatgtg 44043802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 34649444 - 34649569
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||   || ||||||||||| | ||||||||||||||||||||||||    
T  34649444 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaagagt 34649543  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    | || || | |||||||  |||||||    
T  34649544 gaggcgtctctcttgctagtgtggtt 34649569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 37555736 - 37555860
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||| |||||||||||||||||||||| ||||||||| |  ||||||||||||||| || |||| || | |||||||||||||||||||||||    
T  37555736 tgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaagagga-ccttaaatccttagccttaaggttttgggtaagagt 37555834  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  37555835 gtggtgtctctcttgcttgtgtggtt 37555860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 113 - 247
Target Start/End: Complemental strand, 32168856 - 32168733
Alignment:
Q  113 taatgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgcctta 212  Q
    |||||||||||||||| |||||||||||||||||     |||||||||||||||||||||||| ||||      |||||||||||||||||||||||||     
T  32168856 taatgttggtttgcaagtgtgagttatatgtccc-----ggataaaatagtaaaggttgaacacctta------agaggacccataaacccattgccttg 32168768  T
Q  213 aggttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| || | ||||||||    
T  32168767 aggttttgggtaagagtgtggcgtctctcttgctt 32168733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 66630 - 66525
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| ||| |||||||| || ||||||||||||||| |||||||||||||||| ||||||||  || |||||||||||||||||    
T  66630 tgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaaggttttgggt 66531  T
Q  224 aagagt 229  Q
    ||||||    
T  66530 aagagt 66525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 37850758 - 37850646
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||| |||||| |||| |||||||||| |||||||||||||| ||||||||||| | ||  ||||||||| || |    
T  37850758 tgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcggat 37850659  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  37850658 aagagtgtggtgt 37850646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 45084382 - 45084499
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||       | |||||||||||||||    
T  45084382 tgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa------cgtcttaaggttttgggt 45084475  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||| ||||||| | ||||||||    
T  45084476 aagagagtggtgtctctcttgctt 45084499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 66247 - 66136
Alignment:
Q  124 tgcaattgtgagttat-atgtcccacatcggataaaatagtaaaggtt-gaacatcttataagtaagaggacccataaacccattgccttaaggttttgg 221  Q
    ||||| ||||||| || ||||| ||||||||||| || |||||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||    
T  66247 tgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttttgg 66148  T
Q  222 gtaagagtgtgg 233  Q
    ||||||||||||    
T  66147 gtaagagtgtgg 66136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 5528902 - 5528811
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaa 225  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||  |||||||||||||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaactcattttcttaaggttttgggtaa 5528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 5575110 - 5575213
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||| ||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||||| ||||| |||| || |||||||||||| |||||||    
T  5575110 tgtgaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagagt 5575209  T
Q  230 gtgg 233  Q
    ||||    
T  5575210 gtgg 5575213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 24132143 - 24132049
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttt 218  Q
    ||||| ||||||||||||||||| ||||||||| || ||||||||||||||| ||||||| |||| ||| |||||||| ||||||||||||||||    
T  24132143 tgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaaggttt 24132049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 30630796 - 30630690
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||||||||| |||||||||||||| | ||||||||  |||  ||||||||||||| |||||||||| ||||||||||| |||||||||    
T  30630796 tgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaagagaacccataaacacattgccttaaagttttgggt 30630697  T
Q  224 aagagtg 230  Q
    |||||||    
T  30630696 aagagtg 30630690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 21378199 - 21378118
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccat 205  Q
    ||||| ||| |||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||||||||||    
T  21378199 tgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaacccat 21378118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 22077986 - 22077878
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||   | |||||||| || | ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||||    
T  22077986 tgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatagcc-taaggtttggggt 22077888  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  22077887 aagagtgtgg 22077878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 22077243 - 22077160
Alignment:
Q  149 atcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||||||| || ||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  22077243 atcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtg 22077160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 44685456 - 44685564
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaagg-ttgaacatcttataagtaagaggacccataaacccattgccttaaggttttggg 222  Q
    ||||| |||||||||||||||||| |||||||| || |||||||| ||||| | |||||||||||||||||| |||||| ||||||||||| | ||||||    
T  44685456 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaagaggaccaataaactcattgccttaatg-tttggg 44685554  T
Q  223 taagagtgtg 232  Q
    ||| ||||||    
T  44685555 taacagtgtg 44685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 22793279 - 22793387
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaaccca-ttgccttaaggttttgggt 223  Q
    |||| ||||||||||||||||||||||| ||| || |||| |||||||| |  |||||||| |||||| ||||||||||| |||||||| ||||||| ||    
T  22793279 gcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccatttgccttacggttttgagt 22793378  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  22793379 aagagtgtg 22793387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 1188746 - 1188615
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| ||| |||||||| || |||  |||||||| || |||||||| ||| ||| ||||||| |||||| ||||||||||||||    
T  1188746 tgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaactcattgctttaaggttttgggt 1188647  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    || ||||||| || | |||  |||||||||||    
T  1188646 aaaagtgtggcgtctctctcacttatgtggtt 1188615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 45839635 - 45839754
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaa-----catcttataagtaagaggacccataaacccattgccttaaggttttgggtaag 226  Q
    ||||||||||||||||||||||||| || | |||||||||||     || ||||||||||||| ||||||||||   | |||||||||||||||||||||    
T  45839635 tgagttatatgtcccacatcggatagaaaa-taaaggttgaatcgaacaccttataagtaagaagacccataaatgtaatgccttaaggttttgggtaag 45839733  T
Q  227 agtgtggtgtttttcttgctt 247  Q
    | |||||||| | ||||||||    
T  45839734 attgtggtgtctctcttgctt 45839754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 4878803 - 4878869
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 190  Q
    |||||||||||||||||||| ||||||||||||||||||| ||| |||||||| |||||||| ||||    
T  4878803 tgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagtgagag 4878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 4956218 - 4956299
Alignment:
Q  151 cggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||||| || |||||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||| ||||| ||||||    
T  4956218 cggatagaaaagtaaaggttgaacatcttataagtaagaggatccataaactcattgctctaaagttttaggtaaaagtgtg 4956299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 19283613 - 19283504
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||| |||||| || |||  ||||||| ||  || ||| | ||||||| ||||||| ||| ||||||||||||||| |    
T  19283613 tgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacataaactcatcgccttaaggttttggat 19283514  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  19283513 aagagtgtgg 19283504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 1187522 - 1187414
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||||||||| ||||||| ||| || |||  ||||| ||||| |||||||| ||| ||||||||||| |||| ||||||| ||||| ||    
T  1187522 tgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaactcattaccttaagattttgagt 1187423  T
Q  224 aagagtgtg 232  Q
    || ||||||    
T  1187422 aaaagtgtg 1187414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 50051819 - 50051777
Alignment:
Q  114 aatgttggtttgcaattgtgagttatatgtcccacatcggata 156  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  50051819 aatgttggtttgcaagtgtgagttatatgtcccacatcggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 41184192 - 41184152
Alignment:
Q  178 ttataagtaagaggacccataaacccattgccttaaggttt 218  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  41184192 ttataagtaagaggatccataaacccattgccttaaggttt 41184152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 10351202 - 10351269
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||  |||||||| |||| |||||||||| |||| | ||||| ||||||||||||||||||    
T  10351202 aggttgaacactttataagtgagagaacccataaacacattactttaagattttgggtaagagtgtgg 10351269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 171
Target Start/End: Complemental strand, 35154197 - 35154150
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttg 171  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||||    
T  35154197 tgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 11977015 - 11977065
Alignment:
Q  195 cataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgc 245  Q
    |||||||| | ||||||||||||||||||||||||||||||| | ||||||    
T  11977015 cataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgc 11977065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 252
Target Start/End: Complemental strand, 50051776 - 50051718
Alignment:
Q  194 ccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttatgtg 252  Q
    |||||||||||||  |||||||||||| ||||||||||||||| | ||||| |||||||    
T  50051776 ccataaacccattatcttaaggttttgcgtaagagtgtggtgtctctcttgtttatgtg 50051718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 35154106 - 35154049
Alignment:
Q  179 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||| |||||||||  |||| ||||||||||| || |||||||||||||    
T  35154106 tataagtaagagggcccataaactgattgtcttaaggtttttggcaagagtgtggtgt 35154049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Complemental strand, 35530466 - 35530403
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggac 193  Q
    |||| |||||||||||||| ||| |||||| | | |||||||||||| ||||| ||||||||||    
T  35530466 tgtgtgttatatgtcccacgtcgaataaaaaaattaaggttgaacattttatatgtaagaggac 35530403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 175
Target Start/End: Complemental strand, 50469239 - 50469188
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 175  Q
    ||||| |||||||||||||||| ||||| ||||| | |||||||||||||||    
T  50469239 tgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaaca 50469188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 4266949 - 4266875
Alignment:
Q  115 atgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaaga 189  Q
    |||||| ||| ||| |||||||||||||||| ||||  ||||||| |||||| ||||||||  ||| ||||||||    
T  4266949 atgttgttttacaaatgtgagttatatgtcctacattagataaaagagtaaatgttgaacacattagaagtaaga 4266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 47380254 - 47380217
Alignment:
Q  195 cataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  47380254 cataaactcattgccttaaagttttgggtaagagtgtg 47380217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 1e-58; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 36178771 - 36178632
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36178771 tgttagtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 36178672  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||||||||||| | |||||||| |||||||    
T  36178671 ttttgggtaagagtgtggtgtctctcttgcttgtgtggtt 36178632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 37106180 - 37106311
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  37106180 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaagg 37106279  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||||| ||||||||    
T  37106280 ttttgggtaagagtgtggtgtttctcttgctt 37106311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 14745833 - 14745716
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14745833 tgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagg 14745734  T
Q  216 ttttgggtaagagtgtgg 233  Q
    ||||||||||||||||||    
T  14745733 ttttgggtaagagtgtgg 14745716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 115 - 255
Target Start/End: Complemental strand, 41283642 - 41283502
Alignment:
Q  115 atgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaag 214  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  41283642 atgttggtttgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaag 41283543  T
Q  215 gttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||| ||||||||||||| || | ||||| || |||||||    
T  41283542 gttttaggtaagagtgtggcgtctctcttgtttgtgtggtt 41283502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 5542791 - 5542660
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  5542791 tgttggtttgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaagg 5542692  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||| |||||||||||||||| | ||||||||    
T  5542691 tttttggtaagagtgtggtgtctctcttgctt 5542660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 5543169 - 5543044
Alignment:
Q  111 tataatgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgcct 210  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  5543169 tatagtgttggtttgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgcct 5543070  T
Q  211 taaggttttgggtaagagtgtggtgt 236  Q
    |||| |||||||||||||||||||||    
T  5543069 taagattttgggtaagagtgtggtgt 5543044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 116 - 233
Target Start/End: Complemental strand, 14745460 - 14745343
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  14745460 tgttggtttgcaactgtgagttatatgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaagg 14745361  T
Q  216 ttttgggtaagagtgtgg 233  Q
    ||||||||||||||||||    
T  14745360 ttttgggtaagagtgtgg 14745343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 120 - 247
Target Start/End: Original strand, 37105920 - 37106047
Alignment:
Q  120 ggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||| ||||    
T  37105920 ggtttgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagatttt 37106019  T
Q  220 gggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||| | ||||||||    
T  37106020 gggtaagagtgtggtgtctctcttgctt 37106047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 15880269 - 15880386
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15880269 tgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 15880368  T
Q  230 gtggtgtttttcttgctt 247  Q
    |||| || | ||||||||    
T  15880369 gtggcgtctctcttgctt 15880386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 28254389 - 28254283
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28254389 tgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgggtaagagt 28254290  T
Q  230 gtggtgt 236  Q
    |||||||    
T  28254289 gtggtgt 28254283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 6421391 - 6421508
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||    
T  6421391 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaagagt 6421490  T
Q  230 gtggtgtttttcttgctt 247  Q
    ||||||| | ||||||||    
T  6421491 gtggtgtctctcttgctt 6421508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 962598 - 962729
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||    
T  962598 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggt 962697  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||| |||   |||||||| |||||||    
T  962698 aagagtgtgttgtcactcttgcttgtgtggtt 962729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 36178435 - 36178320
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||| |||| ||||||||||||| |||||||    
T  36178435 tgttggtttgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggactcataaacccattgtcttaagg 36178336  T
Q  216 ttttgggtaagagtgt 231  Q
    ||||||||||||||||    
T  36178335 ttttgggtaagagtgt 36178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 15511646 - 15511522
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  15511646 gtgagttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtg 15511547  T
Q  231 tggtgtttttcttgcttatgtggtt 255  Q
    |||||| | |||||||| |||||||    
T  15511546 tggtgtctctcttgcttgtgtggtt 15511522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 33731654 - 33731779
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||| || |||||||||||||| |||||||||||| || |||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  33731654 tgtgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagagt 33731753  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
     |||||| | ||||||||||| ||||    
T  33731754 atggtgtctctcttgcttatgcggtt 33731779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 36178311 - 36178198
Alignment:
Q  142 gtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttc 241  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||  | ||    
T  36178311 gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtggtgcctctc 36178212  T
Q  242 ttgcttatgtggtt 255  Q
    |||||| |||||||    
T  36178211 ttgcttgtgtggtt 36178198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 37632755 - 37632643
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  37632755 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggttttgggt 37632656  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  37632655 aagagtgtggtgt 37632643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 28531472 - 28531361
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||| || || |||||||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  28531472 tgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgggt 28531373  T
Q  224 aagagtgtggtg 235  Q
    ||||||||||||    
T  28531372 aagagtgtggtg 28531361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 31468904 - 31468800
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    ||||||||||||||||| |||||||||||||||||||||    
T  31468904 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaatatctta----taagaggacccataaactcattgccttaaggttttgggt 31468809  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  31468808 aagagtgtg 31468800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 6712982 - 6713103
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg-ttttgggtaagag 228  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||| |||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  6712982 tgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggtaagag 6713081  T
Q  229 tgtggtgtttttcttgcttatg 250  Q
    |||| ||| | |||||||||||    
T  6713082 tgtgatgtctctcttgcttatg 6713103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 38796778 - 38796673
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  38796778 tgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggt 38796679  T
Q  224 aagagt 229  Q
    ||||||    
T  38796678 aagagt 38796673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 42514649 - 42514758
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| ||||| |||| || ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  42514649 tgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggt 42514748  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  42514749 aagagtgtgg 42514758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 6422126 - 6422241
Alignment:
Q  140 atgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttt 239  Q
    |||||||||||| ||||||| |||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||| |     
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctc 6422225  T
Q  240 tcttgcttatgtggtt 255  Q
    |||||||| |||||||    
T  6422226 tcttgcttgtgtggtt 6422241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 35580881 - 35580776
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||| | |||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35580881 tgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagtgagagga-ccataaacccattgccttaaggttttgggt 35580783  T
Q  224 aagagtg 230  Q
    |||||||    
T  35580782 aagagtg 35580776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 36006031 - 36005915
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||| ||| || |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  36006031 tgtgagttatatgtcccacatcgaatagaa-agtaaaagttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaaaagt 36005933  T
Q  230 gtggtgtttttcttgctt 247  Q
    |||| || | ||||||||    
T  36005932 gtggcgtctctcttgctt 36005915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 40679787 - 40679678
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||| |||||||| || ||||| ||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||    
T  40679787 tgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgggt 40679688  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  40679687 aagagtgtgg 40679678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 130 - 254
Target Start/End: Original strand, 40733523 - 40733647
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||| |   |||||| |||||||||||||||    
T  40733523 tgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggacccataaacctacaaccttaaagttttgggtaagagt 40733622  T
Q  230 gtggtgtttttcttgcttatgtggt 254  Q
    ||||||| | ||| |||| ||||||    
T  40733623 gtggtgtctctctcgcttgtgtggt 40733647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 16542449 - 16542556
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||  |||||| |||||||||||| ||||| ||    
T  16542449 tgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaactcattgccttaagattttgagt 16542548  T
Q  224 aagagtgt 231  Q
    ||||||||    
T  16542549 aagagtgt 16542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 31899578 - 31899496
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgcctta 212  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  31899578 tgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaactcattgcctta 31899496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 132 - 238
Target Start/End: Complemental strand, 37895211 - 37895105
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    ||||||||||||||||||||||||| || | |||| |||||| | |||| |||||| || || |||||||||||||||||||||||||||||||||||||    
T  37895211 tgagttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaaaagaacacataaacccattgccttaaggttttgggtaagagtgt 37895112  T
Q  232 ggtgttt 238  Q
    |||||||    
T  37895111 ggtgttt 37895105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 135 - 255
Target Start/End: Complemental strand, 40163520 - 40163399
Alignment:
Q  135 gttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattg-ccttaaggttttgggtaagagtgtgg 233  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||| |||| | || | |||||||||||||||| |||||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccattaacctagtgtctttaaggttttgggtaaaagtgtgg 40163421  T
Q  234 tgtttttcttgcttatgtggtt 255  Q
    ||| | |||||||| |||||||    
T  40163420 tgtctctcttgcttgtgtggtt 40163399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 1769884 - 1770015
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||| ||||||| ||| || || | |    
T  1769884 tgttggtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaactcatagctttgaag 1769983  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
     ||||  |||||||||||||| | ||||||||    
T  1769984 ctttgaataagagtgtggtgtctctcttgctt 1770015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 7598601 - 7598684
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataa 199  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||    
T  7598601 tgttggtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggacccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 29676909 - 29677020
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag-----gacccataaacccattgccttaaggttttgggta 224  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| |||||| || ||||     ||||||||||||||||||||||||| |||  |||    
T  29676909 tgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttataggtgagaggagaagacccataaacccattgccttaaggctttaagta 29677008  T
Q  225 agagtgtggtgt 236  Q
    ||||||||||||    
T  29677009 agagtgtggtgt 29677020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 5367468 - 5367578
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||| ||||||||||| || |||||||||||| ||||||||||||| || |||| ||| |||  |||||||||||||||||||||||||| ||    
T  5367468 tatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgggtaagagtgtggcgt 5367567  T
Q  237 ttttcttgctt 247  Q
     | ||||||||    
T  5367568 ctctcttgctt 5367578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 31259750 - 31259664
Alignment:
Q  148 catcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggt 234  Q
    |||||||||||| |||||||||| |||| ||||||||||||| |||||||||||| ||  |||||||||||||||||||||||||||    
T  31259750 catcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgggtaagagtgtggt 31259664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 38796376 - 38796298
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacc 202  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||    
T  38796376 tgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggacctataaacc 38796298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 40733889 - 40734013
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||| |||||| ||||||| || |||| ||||||||||||||| | ||| |||| |  ||||||| |||||||||||||||    
T  40733889 tgtgagttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagggctcat-aacctacagccttaaagttttgggtaagagt 40733987  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | ||| |||| |||||||    
T  40733988 gtggtgtctgtctcgcttgtgtggtt 40734013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 7598228 - 7598340
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| |||||||| | |||||| ||| || |||||||||| |||| ||||||| ||||||||||||||||| ||| |||||||||||||||||    
T  7598228 tgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttgggt 7598327  T
Q  224 aagagtgtggtgt 236  Q
    |||| | ||||||    
T  7598328 aagaatatggtgt 7598340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 33561609 - 33561501
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| ||||||| |||| || |||  ||||| ||||  |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  33561609 tgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaactcattgtcttaaggttttgggt 33561510  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  33561509 aagagtgtg 33561501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 29874175 - 29874072
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||| ||||||||||||||||| |||| || |||  ||||||||||  |||||| |  |||||||||||||||||||||||||||||||||| |||||||    
T  29874175 tgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaaggttttggataagagt 29874076  T
Q  230 gtgg 233  Q
    ||||    
T  29874075 gtgg 29874072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 137 - 247
Target Start/End: Original strand, 23346250 - 23346359
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||| ||||||| ||| || |||||||||| |||| ||||||| ||||||| ||||||||||||| ||||||||||||| |||||||||||| |||    
T  23346250 tatatgtctcacatcgtatagaaaagtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaaggttttcggtaagagtgtgatgt 23346348  T
Q  237 ttttcttgctt 247  Q
     | ||||||||    
T  23346349 ctctcttgctt 23346359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 30313189 - 30313286
Alignment:
Q  135 gttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||||||||| ||||||||||| || |||  |||||||||| ||||||||| |||||||||| |||| |||||||||||| ||||||||||||||||||    
T  30313189 gttatatgtctcacatcggatagaaaagtggaggttgaaca-cttataagtgagaggacccaaaaactcattgccttaagattttgggtaagagtgtgg 30313286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 37894850 - 37894738
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||| | ||| || |||||||| | || | ||||||||||||| ||| |||||| ||||||||||||| |||||| |    
T  37894850 tgcaaatgtgagttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataagtaagaagactcataaatccattgccttaagattttggtt 37894751  T
Q  224 aagagtgtggtgt 236  Q
    || ||||||||||    
T  37894750 aaaagtgtggtgt 37894738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 124 - 219
Target Start/End: Complemental strand, 12529186 - 12529091
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    ||||| |||||||||||||||| |||||  |||||| ||||||| ||||||| | ||||||||||||||| ||||||| ||||||||||| |||||    
T  12529186 tgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaactcattgccttaaagtttt 12529091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 28254254 - 28254165
Alignment:
Q  140 atgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||| ||||||||||| || |||||||||||||||  |||||||||||||||| ||||||| | ||||||||| |||| ||||||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaacactttgccttaaagtttagggtaagagt 28254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 29873684 - 29873587
Alignment:
Q  135 gttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||| |||||||||||| |||| || |||  ||||||||||| ||||||||  |||||| ||||||| |||||||||||||||||| |||||||||||    
T  29873684 gttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggactcataaactcattgccttaaggttttgagtaagagtgtg 29873587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 30323464 - 30323573
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||| ||||||||||||| ||| |||| || | |  ||||||||||  ||| |||| |||||||| |||||| |||||||||||||||||||||    
T  30323464 tgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagtgagaggacctataaactcattgccttaaggttttgggt 30323563  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  30323564 aagagtgtgg 30323573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 36785721 - 36785664
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttat 181  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36785721 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 29676543 - 29676652
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    ||||||||||||| ||||| |||||||| ||||||| |||||||  |||||||| |||| |||||||||| |||||||      ||||||||||||||||    
T  29676543 tgagttatatgtctcacattggataaaagagtaaagattgaacacattataagtgagagaacccataaactcattgcc------ttttgggtaagagtgt 29676636  T
Q  232 ggtgtttttcttgctt 247  Q
    ||||| | ||||||||    
T  29676637 ggtgtctctcttgctt 29676652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 33953929 - 33953821
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||| |||||||||| |||| || |||  ||||||||||   ||||||| ||||||||||||||||  |||||||||  ||||||||    
T  33953929 tgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaacctgttgccttaaaattttgggt 33953830  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  33953829 aagagtgtg 33953821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 9231257 - 9231356
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    ||||||||||||| || ||| |||| || |||||||||||||||| |||||| |||||||| |||| ||||||  ||||||| ||||||| |||||||||    
T  9231257 tgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataagaggatccatcaacccaccgccttaaagttttggttaagagtgt 9231356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 6421793 - 6421843
Alignment:
Q  186 aagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6421793 aagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgt 6421843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 16590888 - 16590978
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaata-gtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    ||||| ||||||||||||||||||||||  |||||| | ||||||||||||||      |||||||||||||||||||| |||||||||||||||||    
T  16590888 tgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca------aagtaagaggacccataaacacattgccttaaggtttt 16590978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 31385779 - 31385849
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||| || ||||||||| | |||||||||||||||||||||||||||||||||| |  ||||||||||    
T  31385779 aggttgagcaccttataagtgaaaggacccataaacccattgccttaaggttttgggaataagtgtggtgt 31385849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 177 - 255
Target Start/End: Complemental strand, 36784365 - 36784287
Alignment:
Q  177 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| ||||||||||||| ||| ||||||||||||| ||| ||||| |||| | |||||||| |||||||    
T  36784365 cttataagtaagatgacccataaaccctttgtcttaaggttttggataaaagtgttgtgtctctcttgcttgtgtggtt 36784287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 12910236 - 12910335
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||| |||||||||||  || |||| |||||||||  ||||||||| | | |||  |||||  ||||| |||||||||||||||||||||||    
T  12910236 tgagttatatgttccacatcggatggaaaagtacaggttgaaccccttataagtgaaatgacttataaattcattgtcttaaggttttgggtaagagtgt 12910335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 6421688 - 6421738
Alignment:
Q  186 aagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||| |||| || |||||||||||||||||||||||||    
T  6421688 aagaggacccataaacctattgactaaaggttttgggtaagagtgtggtgt 6421738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 3672773 - 3672813
Alignment:
Q  196 ataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  3672773 ataaacccattgccttaagattttgggtaagagtgtggtgt 3672813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 35580534 - 35580494
Alignment:
Q  188 gaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  35580534 gaggacccataaactcattgccttaaggttttgggtaagag 35580494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 3673122 - 3673176
Alignment:
Q  178 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||||||| |||||||| |||||| ||||| |||||| ||||||||||    
T  3673122 ttataagtaagaggatccataaactcattgctttaagattttggctaagagtgtg 3673176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 6421314 - 6421352
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttga 172  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  6421314 agttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 25390372 - 25390314
Alignment:
Q  178 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||| ||||| |||||||||||| |||| ||||||||||||||||  ||||||||||    
T  25390372 ttataactaagaagacccataaacctattgtcttaaggttttgggtagaagtgtggtgt 25390314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 41678512 - 41678419
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||| |||||| |||| || ||   ||||| ||||  |||||||| ||||||||||||||||  |||||||||||||||| ||||||||||    
T  41678512 tatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagaggacccataaacct-ttgccttaaggttttgagtaagagtgt 41678419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 42515031 - 42515078
Alignment:
Q  139 tatgtcccacatcggataaaatagtaaaggttgaacatcttataagta 186  Q
    |||||||||||||||||| || |||||||||| |||| ||||||||||    
T  42515031 tatgtcccacatcggatagaaaagtaaaggttaaacaccttataagta 42515078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 30312831 - 30312897
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||  |||||| | ||| |||||||||||  ||| |||||||||||||||||| ||||||    
T  30312831 aggttgaacactttataacttagatgacccataaacttatttccttaaggttttgggtaaaagtgtg 30312897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 2336666 - 2336723
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||||||||  |||||||| ||||||||||||||  || ||||||||| ||||||||    
T  2336666 aggttgaacactttataagtgagaggacccataaattcaatgccttaagattttgggt 2336723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 28226404 - 28226449
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||| ||||| |||| |||||| ||||||||||||||||    
T  28226404 gacccataaacacattgtcttagggttttaggtaagagtgtggtgt 28226449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 33954419 - 33954311
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| |||| || |||  ||||| |||||  ||||| | | | ||| |||||| | | ||||||| | ||||||||    
T  33954419 tgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttaaacattatataacttaaatgactcataaatcta-tgccttacgattttgggt 33954321  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  33954320 aagagtgtgg 33954311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 3e-56; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 29518495 - 29518626
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  29518495 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaagg 29518594  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  29518595 ttttgggtaagagtgtggtgtctctcttgctt 29518626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 29518912 - 29519043
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  29518912 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaagg 29519011  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  29519012 ttttgggtaagagtgtggtgtctctcttgctt 29519043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 32741171 - 32741302
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  32741171 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaagg 32741270  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  32741271 ttttgggtaagagtgtggtgtctctcttgctt 32741302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 3409251 - 3409382
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  3409251 tgttggtttgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaagg 3409350  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  3409351 ttttgggtaagagtgtggtgtctctcttgctt 3409382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 35210196 - 35210327
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  35210196 tgttggtttgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaagg 35210295  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||||| | ||||||    
T  35210296 ttttgggtaagagtgtggtgtttcttttgctt 35210327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 2377760 - 2377887
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377760 tgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 2377859  T
Q  230 gtggtgtttttcttgcttatgtggtttt 257  Q
    ||||||| ||||||||||  ||||||||    
T  2377860 gtggtgtctttcttgcttgagtggtttt 2377887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 2378118 - 2378249
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  2378118 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaagg 2378217  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||| ||||||| |||||||| | ||||||||    
T  2378218 ttttaggtaagaatgtggtgtctctcttgctt 2378249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 3058218 - 3058349
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||    
T  3058218 tgttggtttgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaagg 3058317  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  3058318 ttttgggtaagagtgtggtgtctctcttgctt 3058349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 1127352 - 1127491
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||    
T  1127352 tgttggtttgcaactgtgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaagg 1127451  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||||||||| || | |||| |||||||||||    
T  1127452 ttttgggtaagagtgtggcgtctctcttacttatgtggtt 1127491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 3409652 - 3409783
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |      
T  3409652 tgttggtttgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggacccataaacccattgcctttatt 3409751  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  3409752 ttttgggtaagagtgtggtgtctctcttgctt 3409783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 3415450 - 3415581
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  3415450 tgttggtttgcgagtgtgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaagg 3415549  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||| |||||||||||||||| | ||||||||    
T  3415550 tttttggtaagagtgtggtgtctctcttgctt 3415581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 26544041 - 26544172
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||  |||||||||    
T  26544041 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaagg 26544140  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||| ||||||||||| ||| | ||||||||    
T  26544141 ttttgagtaagagtgtgatgtctctcttgctt 26544172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 116 - 234
Target Start/End: Complemental strand, 14748504 - 14748386
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| ||||||    
T  14748504 tgttgatttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaagg 14748405  T
Q  216 ttttgggtaagagtgtggt 234  Q
    |||||||||||||||||||    
T  14748404 ttttgggtaagagtgtggt 14748386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 32460732 - 32460630
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32460732 tgtgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagt 32460633  T
Q  230 gtg 232  Q
    |||    
T  32460632 gtg 32460630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 2580030 - 2579907
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||  |||||||||||||||||    
T  2580030 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggt 2579931  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    |||| |||||||| | ||||||||    
T  2579930 aagaatgtggtgtctctcttgctt 2579907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 16107684 - 16107801
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||  |||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16107684 tgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagt 16107783  T
Q  230 gtggtgtttttcttgctt 247  Q
    ||||||| | ||||||||    
T  16107784 gtggtgtctctcttgctt 16107801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 10074142 - 10074018
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    ||||||||||| |||||||||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10074142 gtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtg 10074043  T
Q  231 tggtgtttttcttgcttatgtggtt 255  Q
    |||||| | ||| |||||| |||||    
T  10074042 tggtgtctctctcgcttatttggtt 10074018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 10074521 - 10074409
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||| | ||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  10074521 tgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 10074422  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  10074421 aagagtgtggtgt 10074409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 1846741 - 1846860
Alignment:
Q  117 gttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggt 216  Q
    ||||| |||||| ||||| || |||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  1846741 gttgggttgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggt 1846840  T
Q  217 tttgggtaagagtgtggtgt 236  Q
    ||||| ||||||||||||||    
T  1846841 tttggataagagtgtggtgt 1846860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 2578594 - 2578489
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2578594 tgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaagagt 2578496  T
Q  230 gtggtgt 236  Q
    |||||||    
T  2578495 gtggtgt 2578489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 16454913 - 16455030
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  16454913 tgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagt 16455012  T
Q  230 gtggtgtttttcttgctt 247  Q
    |||| || | ||||||||    
T  16455013 gtggcgtctctcttgctt 16455030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 9062501 - 9062398
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| |||    
T  9062501 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaactcattgtcttaa-gttttgggtaaaagt 9062403  T
Q  230 gtggt 234  Q
    |||||    
T  9062402 gtggt 9062398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 593867 - 593757
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||    
T  593867 tgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgggt 593768  T
Q  224 aagagtgtggt 234  Q
    || ||||||||    
T  593767 aatagtgtggt 593757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 126 - 247
Target Start/End: Original strand, 2843556 - 2843678
Alignment:
Q  126 caattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagagga-cccataaacccattgccttaaggttttgggta 224  Q
    ||||||||||||||||||  |||||||||||||||| |||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  2843556 caattgtgagttatatgtttcacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggta 2843655  T
Q  225 agagtgtggtgtttttcttgctt 247  Q
    |||||||||| | | ||||||||    
T  2843656 agagtgtggtatctctcttgctt 2843678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 2579644 - 2579519
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||||| |||| ||||||||| | | | ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||    
T  2579644 tgtgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgggtaaaagt 2579545  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
     |||||| | |||||||| |||||||    
T  2579544 atggtgtctctcttgcttgtgtggtt 2579519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 6999948 - 6999823
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||| |||||| ||||||||| |||||||| || |||||||||||||||| |||||||    
T  6999948 tgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataagagt 6999849  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    |||| || | ||||||| ||||||||    
T  6999848 gtggcgtctctcttgctaatgtggtt 6999823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 16454581 - 16454698
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||| ||||||||||| ||||||| | |||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  16454581 tgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagt 16454680  T
Q  230 gtggtgtttttcttgctt 247  Q
    |||| || | ||||||||    
T  16454681 gtggcgtctctcttgctt 16454698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 1950337 - 1950235
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||| ||||||| | | ||||||||||||||| ||||||||    
T  1950337 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaagagt 1950238  T
Q  230 gtg 232  Q
    |||    
T  1950237 gtg 1950235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 10073772 - 10073662
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| ||||||||||||||||||||| ||||  |||||||||||||| |||||||||||||||| |||||||| ||||| |||||| ||||||||    
T  10073772 tgcaagtgttagttatatgtcccacatcggagaaaa--gtaaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttgggt 10073675  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  10073674 aagagtgtggtgt 10073662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 125 - 255
Target Start/End: Complemental strand, 2578991 - 2578862
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggta 224  Q
    |||| ||||| ||||||||||| |||||||||||| |||||| |||||| | ||||||| |||||||| |||||||| |||| |||||||||||||||||    
T  2578991 gcaagtgtgatttatatgtccctcatcggataaaa-agtaaatgttgaataccttataaataagaggatccataaactcattaccttaaggttttgggta 2578893  T
Q  225 agagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||| | | |||||| |||||||    
T  2578892 agagtgtggtgtctcttttgcttgtgtggtt 2578862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 5832174 - 5832054
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| |||   ||||||| |||||||||| |||||||    
T  5832174 agttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaagcca-ccccttaagattttgggtaaaagtgtgg 5832076  T
Q  234 tgtttttcttgcttatgtggtt 255  Q
    ||| | |||| ||| |||||||    
T  5832075 tgtctctcttacttgtgtggtt 5832054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 130 - 215
Target Start/End: Original strand, 16108069 - 16108154
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    |||||||||||||| ||||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  16108069 tgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaacccattgccttaagg 16108154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 10911565 - 10911674
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaata-gtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttggg 222  Q
    ||||| |||||||||||||||| ||||| ||||||| | |||||||||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||      
T  10911565 tgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaagttttgaa 10911664  T
Q  223 taagagtgtg 232  Q
    ||||||||||    
T  10911665 taagagtgtg 10911674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 5958766 - 5958653
Alignment:
Q  119 tggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttt 218  Q
    |||| ||||||||||||||||||||   ||||||||||||| ||||||||||||||| ||||||| |||||| || ||||||| ||||| ||||| ||||    
T  5958766 tggtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaactcattgtcttaaagttt 5958667  T
Q  219 tgggtaagagtgtg 232  Q
    ||||  ||||||||    
T  5958666 tgggatagagtgtg 5958653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 2579253 - 2579136
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||||    |||||||| ||||||||||||  | |||||| ||||| |||||||||||    
T  2579253 agttatatgtcccacatcggataaaagagtaaaagttgaacacctta----taagaggaaccataaacccataactttaaggctttggctaagagtgtgg 2579158  T
Q  234 tgtttttcttgcttatgtggtt 255  Q
    ||| | |||||||  |||||||    
T  2579157 tgtctctcttgctcgtgtggtt 2579136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 6071132 - 6071241
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||| | ||| || |||  ||||||||||  |||||||| ||| || |||||||| |||||||||||| |||||| |    
T  6071132 tgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatgatccataaactcattgccttaagattttggat 6071231  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  6071232 aagagtgtgg 6071241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 12092629 - 12092528
Alignment:
Q  135 gttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggt 234  Q
    |||| ||||||||||||||||| || |||  ||||||| ||  |||||||| |||||| |||||||| |||||||||||||||||| |||||| ||||||    
T  12092629 gttagatgtcccacatcggatagaaaagtggaggttgagcactttataagtgagaggatccataaactcattgccttaaggttttgagtaagactgtggt 12092530  T
Q  235 gt 236  Q
    ||    
T  12092529 gt 12092528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 8481927 - 8482038
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| ||||| |||| || |||  ||||||||||  |||||| | ||| ||| ||||||| |||||||||||| ||||||||    
T  8481927 tgcaagtgtgagttatatgtcc-acatcagatataaaagtggaggttgaacactttataaatgagatgactcataaactcattgccttaagattttgggt 8482025  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  8482026 aagagtgtggtgt 8482038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 240
Target Start/End: Original strand, 31714683 - 31714785
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||| |||||||||| || |||  ||||||||| |  ||||| | ||||||||||| ||| |||||||||||||||||| |||||||||||| ||    
T  31714683 tatatgtcctacatcggatagaaaagtggaggttgaacgttatataa-tgagaggacccattaactcattgccttaaggttttgagtaagagtgtggcgt 31714781  T
Q  237 tttt 240  Q
    ||||    
T  31714782 tttt 31714785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 22605345 - 22605299
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  22605345 acccataaacccattgccttaaggttttgggtaagaatgtggtgttt 22605299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 35210498 - 35210551
Alignment:
Q  144 cccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccat 197  Q
    |||||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  35210498 cccacatcggataaaatagtaaaggttgaataccttgtaagtaagaggacccat 35210551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 21130147 - 21130101
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||    
T  21130147 acccataaatccattgccttaaggttttggataagagtgtggtgttt 21130101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 2975567 - 2975660
Alignment:
Q  139 tatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||||||||||||  ||| || |||||| |||||||| |||||||| |||| |||||||||| || ||| ||||| ||||||  ||||||||||    
T  2975567 tatgtcccacatcaaatagaaaagtaaatgttgaacaccttataagcaagatgacccataaatcctttgtcttaaagttttgaataagagtgtg 2975660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 14789325 - 14789279
Alignment:
Q  161 agtaaaggttgaacatcttataagtaagaggacccataaacccattg 207  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  14789325 agtaaaggttgaacaccttacaagtaagaggacccataaaccaattg 14789279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 12085191 - 12085083
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||  |||| |||| || |||  || |||||||  ||||||   | ||||| |||||| |||| |||||||||||||||||    
T  12085191 tgcaagtgtgagttatatgtcctgcatcagatagaa-agtggagtttgaacactttataatagaaaggactcataaaaccatggccttaaggttttgggt 12085093  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  12085092 aagagtgtgg 12085083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 11637811 - 11637767
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||    
T  11637811 acccataaacccattgtcttaagattttggataagagtgtggtgt 11637767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 17135221 - 17135119
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| ||||||||||| |  |||||| ||| || | |||||||| |||||||  ||||||| |||||    || ||||||| |||||||    
T  17135221 tgtgagttatatgtctcacatcggatagagaagtaaatgtttaataccttataagcaagaggattcataaactcattgttagaaagttttggataagagt 17135122  T
Q  230 gtg 232  Q
    |||    
T  17135121 gtg 17135119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 8e-54; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 25483336 - 25483467
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25483336 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggt 25483435  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | |||||||| |||||||    
T  25483436 aagagtgtggtgtctctcttgcttgtgtggtt 25483467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 1731803 - 1731672
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  1731803 tgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgggt 1731704  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||||| |||||||| |||||||    
T  1731703 aagagtgtggtgtttctcttgcttgtgtggtt 1731672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 50630919 - 50630788
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  50630919 tgttggtttgcaagcgtgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaagg 50630820  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  50630819 ttttgggtaagagtgtggtgtctctcttgctt 50630788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 54017751 - 54017620
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  54017751 tgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttaggt 54017652  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||| ||| | ||||||||||||||||    
T  54017651 aagagtgtgatgtctctcttgcttatgtggtt 54017620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 116 - 252
Target Start/End: Original strand, 49880152 - 49880288
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  49880152 tgttggtttgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaagg 49880251  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtg 252  Q
    ||||||||||||| ||||||| | ||||| |||||||    
T  49880252 ttttgggtaagagcgtggtgtctctcttgtttatgtg 49880288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 55933288 - 55933168
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  55933288 tgttggtttgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaag 55933189  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||    
T  55933188 ttttgggtaagagtgtggtgt 55933168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 41370349 - 41370480
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| |    
T  41370349 tgttggtttgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaag 41370448  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||||| |||| | ||||||||    
T  41370449 ttttgggtaagagtgtagtgtctctcttgctt 41370480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 36629243 - 36629368
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||||||| || |||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36629243 tgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagt 36629342  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  36629343 gtggtgtctctcttgcttgtgtggtt 36629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 52884887 - 52885000
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt-ggg 222  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||    
T  52884887 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgggg 52884986  T
Q  223 taagagtgtggtgt 236  Q
    ||||| ||||||||    
T  52884987 taagaatgtggtgt 52885000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 52884695 - 52884819
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt-ggg 222  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||||||||||||||||||||| |||    
T  52884695 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttgggg 52884794  T
Q  223 taagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||| | ||||||||    
T  52884795 taagagtgtggtgtctctcttgctt 52884819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 54108928 - 54109035
Alignment:
Q  139 tatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |    
T  54108928 tatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaa-gttttgggtaagagtgtggtgtct 54109026  T
Q  239 ttcttgctt 247  Q
     ||||||||    
T  54109027 ctcttgctt 54109035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 3340807 - 3340930
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||| |||| ||| ||| |||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||    
T  3340807 tgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggt 3340906  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||| ||||||||||    
T  3340907 aagagtgtggtgtctttcttgctt 3340930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 22028117 - 22027986
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||    
T  22028117 tgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaaggttttgggt 22028018  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||| |||||||| | ||| ||||||||||||    
T  22028017 aagaatgtggtgtctctctcgcttatgtggtt 22027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 49302910 - 49303032
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataa--gtaagaggacccataaacccattgccttaaggttttgggtaaga 227  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  49302910 tgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgggtaaga 49303009  T
Q  228 gtgtggtgtttttcttgcttatg 250  Q
    ||||||||| | |||| ||||||    
T  49303010 gtgtggtgtatctcttacttatg 49303032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 133 - 255
Target Start/End: Original strand, 44620362 - 44620484
Alignment:
Q  133 gagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgtg 44620461  T
Q  233 gtgtttttcttgcttatgtggtt 255  Q
     ||||| |||||||| |||||||    
T  44620462 atgtttctcttgcttgtgtggtt 44620484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 4955473 - 4955364
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  4955473 tgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggt 4955374  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  4955373 aagagtgtgg 4955364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 6975622 - 6975486
Alignment:
Q  114 aatgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 213  Q
    |||||| |||||||| ||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||  |||||    
T  6975622 aatgttagtttgcaaatgtgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaatccattatcttaa 6975523  T
Q  214 ggttttgggtaagagtgtggtgtttttcttgcttatg 250  Q
    | |||||||||||||||||| || | |||||||||||    
T  6975522 gattttgggtaagagtgtggcgtctctcttgcttatg 6975486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 121 - 236
Target Start/End: Original strand, 50002423 - 50002538
Alignment:
Q  121 gtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttg 220  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||||||||||||  || |||||||||||||||||||| |||||| ||||||||||||    
T  50002423 gtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttg 50002522  T
Q  221 ggtaagagtgtggtgt 236  Q
    ||||||||||||||||    
T  50002523 ggtaagagtgtggtgt 50002538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 34646799 - 34646693
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  34646799 tgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggttttgggtaagagt 34646700  T
Q  230 gtggtgt 236  Q
    |||||||    
T  34646699 gtggtgt 34646693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 139 - 253
Target Start/End: Original strand, 45496820 - 45496934
Alignment:
Q  139 tatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||| |    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtct 45496919  T
Q  239 ttcttgcttatgtgg 253  Q
     |||||||| |||||    
T  45496920 ctcttgcttgtgtgg 45496934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 2741071 - 2741180
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||    
T  2741071 tgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggttttgggt 2741170  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  2741171 aagagtgtgg 2741180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 20825842 - 20825967
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| |||||| |||||||||||  | |||||||||||||||||||||||    
T  20825842 tgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacctttagccttaaggttttgggtaagagt 20825941  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||| |||| |||||| ||||    
T  20825942 gtggtgtttctcttccttatgcggtt 20825967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 39404404 - 39404529
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||| ||||||| ||||||||| ||||| |||||||||||||||||||||||||| || |||||||||||||||| |||| |    
T  39404404 tgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaacctatagccttaaggttttgggcaagaat 39404503  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  39404504 gtggtgtctctcttgcttgtgtggtt 39404529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 50459727 - 50459852
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||||||||     
T  50459727 tgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccattatcttaaggttttaggtaagagc 50459826  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  50459827 gtggtgtctctcttgcttgtgtggtt 50459852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 54936215 - 54936308
Alignment:
Q  143 tcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54936215 tcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 54936308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 10245920 - 10246031
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||    
T  10245920 tgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaagagga-ccataaacccaaagccttaaggttttgggt 10246018  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  10246019 aagagtgtggtgt 10246031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 44621011 - 44621125
Alignment:
Q  133 gagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||||||| | ||||||| ||||| ||||||||||||||||||||||||    
T  44621011 gagttgtatgacccacatcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtgtg 44621110  T
Q  233 gtgtttttcttgctt 247  Q
    |||||| ||||||||    
T  44621111 gtgtttctcttgctt 44621125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 22183420 - 22183311
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||| ||||||||||||||||| |||||| ||||||||  |||||||||| ||||||||||||||||||||||||||||||||| |    
T  22183420 tgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttggat 22183321  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  22183320 aagagtgtgg 22183311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 39793010 - 39792885
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||| |||| || |||||| |||||||| |||||||| ||||||| || ||||| |||||||||||||||||||||||||||    
T  39793010 tgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaagaggaaccgtaaactcattgccttaaggttttgggtaagagt 39792911  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  39792910 gtggtgtctctcttgcttgtgtggtt 39792885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 3244607 - 3244499
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  3244607 tgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgtcttaaagttttgggt 3244508  T
Q  224 aagagtgtg 232  Q
    |||| ||||    
T  3244507 aagaatgtg 3244499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 36608817 - 36608705
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| ||||||||||||| |||||| |||||||| || ||||||||||||| ||||||| |||||| |||||||||||||||    
T  36608817 tgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgggt 36608718  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  36608717 aagagtgtggtgt 36608705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 44620660 - 44620782
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||| ||||  ||||||||||||||||    
T  44620660 tgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccataaa-ccataaccttaaggttttgggt 44620758  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||| | | ||||||||    
T  44620759 aagagtgtggtttctctcttgctt 44620782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 54343147 - 54343041
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggac-------cccattgccttaaggttttgggtaagagtgtgg 54343055  T
Q  234 tgtttttcttgctt 247  Q
    ||| | ||||||||    
T  54343054 tgtctctcttgctt 54343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 142 - 236
Target Start/End: Complemental strand, 18932887 - 18932793
Alignment:
Q  142 gtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||| ||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18932887 gtcctacatcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgt 18932793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 36572025 - 36572131
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||||    
T  36572025 tgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggttagagt 36572124  T
Q  230 gtggtgt 236  Q
     ||||||    
T  36572125 atggtgt 36572131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 2740700 - 2740809
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||||  |||||||||||||  ||    
T  2740700 tgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggttttacgt 2740799  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  2740800 aagagtgtgg 2740809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 130 - 250
Target Start/End: Original strand, 20826223 - 20826343
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||||||| |||||||  |||| |||||||||    
T  20826223 tgtgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaacccataaacccatagccttaacattttaggtaagagt 20826322  T
Q  230 gtggtgtttttcttgcttatg 250  Q
    ||| ||| | |||| ||||||    
T  20826323 gtgatgtctctcttccttatg 20826343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 49076986 - 49076864
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| ||| || || ||||||||||||||||||||| |||||| ||||||| ||||||||||||||  ||||||||||||||||    
T  49076986 tgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttata-gtaagagaacccataaacccataaccttaaggttttgggt 49076888  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
     |||||||||||| ||||||||||    
T  49076887 tagagtgtggtgtctttcttgctt 49076864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 41707614 - 41707509
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||| || |||||||||| ||||| ||||||||||| |||||||||    
T  41707614 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaaaagaacccataaactcattgtcttaaggtttt-ggtaagagt 41707516  T
Q  230 gtggtgt 236  Q
    |||||||    
T  41707515 gtggtgt 41707509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 123 - 255
Target Start/End: Original strand, 54108537 - 54108668
Alignment:
Q  123 ttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccat-aaacccattgccttaaggttttgg 221  Q
    |||||| ||||||||||  |||||| || |||||||||||||||||||||||| ||||||||||| ||||||||| |||  |||||||||||||||||||    
T  54108537 ttgcaagtgtgagttat--gtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacccataaaattcattgccttaaggttttgg 54108634  T
Q  222 gtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
     |||||||||||||| | |||||||| |||||||    
T  54108635 ctaagagtgtggtgtctatcttgcttgtgtggtt 54108668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 39404024 - 39404149
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| |||| | |||||| |||||||||||||||  |||||||||||||||| ||||||| ||| || ||||||||||||||||||||    
T  39404024 tgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaagagt 39404123  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    |||| || | |||||||| |||||||    
T  39404124 gtggcgtctctcttgcttgtgtggtt 39404149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 3341128 - 3341259
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||| ||||  ||||||||||||||||||||||   |||||  ||||| ||||||||    
T  3341128 tgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggacccataacatcattgttttaagattttgggt 3341227  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||| ||| ||||||  ||||||||||    
T  3341228 aagagtgtgatgtctttcttaattatgtggtt 3341259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 16888971 - 16888864
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggta 224  Q
    |||| ||||||||||||||||||||||||||| || ||||||||||||| | |||||||||||||| ||| |||||| ||||| |||| |||||||||||    
T  16888971 gcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggta 16888872  T
Q  225 agagtgtg 232  Q
    ||||||||    
T  16888871 agagtgtg 16888864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 54017845 - 54017750
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||| ||||||||||||    
T  54017845 tatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccatattcccattgtcttaaggttttaggtaagagtgtg 54017750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 32941279 - 32941171
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||  |||||||| | || ||||||||||||||| ||||||| ||||||| | ||||||| |||||||||||||||||||||    
T  32941279 tgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggttttgggt 32941180  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  32941179 aagagtgtg 32941171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 54741334 - 54741227
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||| ||  |||| ||||||||||||| |    
T  54741334 tgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccatacacagattgtcttaaggttttggat 54741235  T
Q  224 aagagtgt 231  Q
    ||||||||    
T  54741234 aagagtgt 54741227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 22028515 - 22028402
Alignment:
Q  136 ttatatgtcccacatcggataaaatag--taaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||||||||| ||||||||||||| |   ||||||||||||| ||||| ||||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  22028515 ttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtgg 22028416  T
Q  234 tgtttttcttgctt 247  Q
    ||| | ||||||||    
T  22028415 tgtctctcttgctt 22028402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 49076604 - 49076510
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttt 218  Q
    ||||| |||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||    
T  49076604 tgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaagaggacctataaacccattgtcttaaagttt 49076510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 4390257 - 4390149
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||| || ||||||||| ||||||| ||||||||||||||| |||||||||||||||| || | | | |||||| ||||||||||||||    
T  4390257 tgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaagaggatcctttagcacattgcgttaaggttttgggt 4390158  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  4390157 aagagtgtg 4390149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 16889691 - 16889580
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggta 224  Q
    |||| ||||||||||||||| || |||||||| || ||||||||||||| | ||||||||||||||||  |||||||| | |||||||| ||||||||||    
T  16889691 gcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggta 16889592  T
Q  225 agagtgtggtgt 236  Q
    ||||| ||||||    
T  16889591 agagtatggtgt 16889580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 10246358 - 10246436
Alignment:
Q  135 gttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 213  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10246358 gttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaacccatagccttaa 10246436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 34004739 - 34004633
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| |||||  ||||||| | ||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||| | |    
T  34004739 tgcaagtgtgagttatatgtcacacatatgataaaa-actaaaggttgaacaacttataagtaagaggacccataaactcatt-ccttaaggttttcgat 34004642  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  34004641 aagagtgtg 34004633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 43174512 - 43174638
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaat-agtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    ||||||||||||| | |||||| |||||||  ||||||||||||||| ||||||||||||||||| |||||||| ||  |||||| || |||||||||||    
T  43174512 tgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataaacctatgaccttaaagtgttgggtaagag 43174611  T
Q  229 tgtggtgtttttcttgcttatgtggtt 255  Q
    ||||| || | ||||| |||| |||||    
T  43174612 tgtggcgtctctcttgtttatatggtt 43174638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 124 - 225
Target Start/End: Complemental strand, 51768216 - 51768115
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| | |||| ||| || |||||| |||||||| ||||||| ||||||||| ||||||| ||||| |||||||||||||||    
T  51768216 tgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaactcattgtcttaaggttttgggt 51768117  T
Q  224 aa 225  Q
    ||    
T  51768116 aa 51768115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 31691205 - 31691261
Alignment:
Q  177 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31691205 cttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtgg 31691261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 132 - 255
Target Start/End: Original strand, 19504713 - 19504827
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||||||| |||||||||||||||||| ||||||||          ||||||||||||||| | |||||||||| |||||||||||||||||    
T  19504713 tgagttatatgtcccatatcggataaaatagtaaaagttgaacac---------aagaggacccataaatctattgccttaaagttttgggtaagagtgt 19504803  T
Q  232 ggtgtttttcttgcttatgtggtt 255  Q
    || || | |||||||| |||||||    
T  19504804 ggcgtctatcttgcttgtgtggtt 19504827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 50788147 - 50788088
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 175  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  50788147 tgttggtttgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaaca 50788088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 40067049 - 40067175
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaag-gttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    |||||||||||||| | |||||||||||||  |||||  ||||||||  |||||||||||||||| |||| | ||| | ||||||| |||||||||| ||    
T  40067049 tgtgagttatatgttctacatcggataaaagtgtaaaaagttgaacacattataagtaagaggacacatagatccactaccttaagattttgggtaaaag 40067148  T
Q  229 tgtggtgtttttcttgcttatgtggtt 255  Q
    |||| ||| | ||||||||||||||||    
T  40067149 tgtgatgtctctcttgcttatgtggtt 40067175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 44620304 - 44620362
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 190  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  44620304 tgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 23817783 - 23817706
Alignment:
Q  178 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||| | |||||||  |||||||    
T  23817783 ttataagtaagaggattcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttgctagtgtggtt 23817706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 28034229 - 28034338
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||||||||||| ||||||||| || |||  ||||||||||  |||||||| |||| ||||||||||  ||||| |||||||||| |||    
T  28034229 tgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaacttattgctttaaggttttaggt 28034328  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  28034329 aagagtgtgg 28034338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 145 - 236
Target Start/End: Complemental strand, 48111833 - 48111742
Alignment:
Q  145 ccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||| |||||||||| |||||||||||||||  |||||||||| |||||  ||||| ||||| |||||||||||| |||| |||||||||||    
T  48111833 ccacctcggataaaagagtaaaggttgaacacattataagtaaaaggacttataaatccattaccttaaggttttaggtatgagtgtggtgt 48111742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 760195 - 760300
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||| ||| || | | ||||||||  |  |||||||| ||||||||||||||| |||||||||||| |||| ||||| |||    
T  760195 tgtgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagaggacccataaactcattgccttaagatttt-ggtaaaagt 760293  T
Q  230 gtggtgt 236  Q
    |||||||    
T  760294 gtggtgt 760300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 3271841 - 3271895
Alignment:
Q  178 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  3271841 ttataagtaagagaacccataaacctattgccttaaggttttgggtaagagtgtg 3271895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 124 - 193
Target Start/End: Original strand, 3700365 - 3700434
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggac 193  Q
    ||||| |||||||||||||||| ||||||||||||| |||||| |||||||| ||||||||||| |||||    
T  3700365 tgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaaggac 3700434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 18879852 - 18879914
Alignment:
Q  170 tgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||||| ||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||||    
T  18879852 tgaacaccttataagtaagatgacctataaacctatttccttaaggttttgggtaagagtgtg 18879914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 44621426 - 44621492
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagag 190  Q
    ||||| |||||||||||||||| |||| |||||||| |||||||||| |||| ||||||||||||||    
T  44621426 tgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagag 44621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 45489481 - 45489380
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||| ||||||||| |||||||||||||| ||||||||||||||| | |||||||||||| || | |||||| | ||  ||||| |||| |||||||||    
T  45489481 tgtgaattatatgtctcacatcggataaaagagtaaaggttgaacaccatataagtaagagaactcttaaacctactg-tttaagatttttggtaagagt 45489383  T
Q  230 gtg 232  Q
    |||    
T  45489382 gtg 45489380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 11197293 - 11197338
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  11197293 gacccataaacccattgccttagggttttgggtaagagtgtggtgt 11197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 231
Target Start/End: Complemental strand, 15841134 - 15841034
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||| |||||||||||| ||| |||| || |||  ||| ||||||| |||||||| |||||| | ||||||||||||| |||| |||||||||||||||    
T  15841134 tgtgaattatatgtcccatatcagatagaaaagtggaggctgaacattttataagtgagaggatctataaacccattgctttaa-gttttgggtaagagt 15841036  T
Q  230 gt 231  Q
    ||    
T  15841035 gt 15841034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 11348484 - 11348396
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgcctta 212  Q
    |||||||||||||||||||| | ||||| |||||||||||  ||||||||||  |||||||| |||||| ||||| |  ||||||||||    
T  11348484 tgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagtgagaggatccatatattcattgcctta 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 23557022 - 23556914
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||| ||||   |||||||||| || |||  ||||||||||| |||||| |||||| | |||||||  ||||||||||| ||||||| |    
T  23557022 tgcaagtgtgagttaaatgttttacatcggatagaaaagtggaggttgaacattttataaataagagaatccataaaatcattgccttaaagttttggat 23556923  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  23556922 aagagtgtg 23556914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 15841482 - 15841416
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||  || ||||| ||||||  ||||||| ||||||||||||||||||||||||||||||    
T  15841482 aggttgaacactttgtaagtgagaggattcataaacacattgccttaaggttttgggtaagagtgtg 15841416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 234
Target Start/End: Original strand, 34544119 - 34544217
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg-ttttgggtaagagtgtggt 234  Q
    ||||| || ||||||| ||| || |||  ||||||| ||  |||||| | ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  34544119 tatatatctcacatcgaatagaaaagtggaggttgatcactttataaatgagaggacccataaactcattgccttaaggtttttgggtaagagtgtggt 34544217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 45489868 - 45489758
Alignment:
Q  126 caattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaa 225  Q
    ||||||||||||||||||  ||||| |||||||| ||||||| ||||| ||| ||||||||||| || || ||||||       ||||||||||||||||    
T  45489868 caattgtgagttatatgtatcacattggataaaagagtaaagattgaatatcatataagtaagatgatccttaaaccttaaagtttaaggttttgggtaa 45489769  T
Q  226 gagtgtggtgt 236  Q
     ||||||||||    
T  45489768 tagtgtggtgt 45489758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 44620950 - 44621011
Alignment:
Q  130 tgtgagttatatgtccca-catcggataaaatagtaaaggttgaacatcttataagtaagag 190  Q
    ||||||||| |||||||| ||||||||||||  |||||||||||||| ||||||||||||||    
T  44620950 tgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 43827480 - 43827551
Alignment:
Q  164 aaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||| ||||||  ||||||| ||||||||||||||||  ||||||||||||| ||||| ||||||||||||||    
T  43827480 aaagattgaactccttataaataagaggacccataaattcattgccttaagg-tttggataagagtgtggtgt 43827551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Original strand, 51681604 - 51681652
Alignment:
Q  190 ggacccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    |||| |||| ||||||||||||||| |||||||||||||||||||||||    
T  51681604 ggactcatatacccattgccttaagattttgggtaagagtgtggtgttt 51681652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 1868119 - 1868158
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  1868119 acccataaacccattgccttaaagttttgggtaagagtgt 1868158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 10396483 - 10396526
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggt 234  Q
    |||||||||||||||||||||| |||||||| ||||||||||||    
T  10396483 gacccataaacccattgccttagggttttggataagagtgtggt 10396526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 10396198 - 10396243
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||    
T  10396198 gacccataaacccattgccttagggttttaggtaagagggtggtgt 10396243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 2891924 - 2891860
Alignment:
Q  178 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttct 242  Q
    ||||||||||||||| ||||||||| | || ||||||||||||||| | |||||| ||| |||||    
T  2891924 ttataagtaagaggatccataaacctaatgtcttaaggttttgggttaaagtgtgatgtctttct 2891860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 11706641 - 11706591
Alignment:
Q  182 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||||  |||||| |||||| ||||||||||||||||||||||||    
T  11706641 aagtaagaggact-ataaactcattgctttaaggttttgggtaagagtgtgg 11706591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 39699077 - 39699026
Alignment:
Q  149 atcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 200  Q
    |||||||| || |||||||||||||||| || |||||||||||| |||||||    
T  39699077 atcggatataaaagtaaaggttgaacatattctaagtaagaggatccataaa 39699026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 45484774 - 45484817
Alignment:
Q  179 tataagtaagaggacccataaacccattgccttaaggttttggg 222  Q
    ||||||| |||| ||||||||||||| |||||||||||||||||    
T  45484774 tataagtgagagaacccataaacccaatgccttaaggttttggg 45484817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 147
Target Start/End: Complemental strand, 18933137 - 18933103
Alignment:
Q  113 taatgttggtttgcaattgtgagttatatgtccca 147  Q
    |||||||||||||||| ||||||||||||||||||    
T  18933137 taatgttggtttgcaagtgtgagttatatgtccca 18933103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 922485 - 922530
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||| |||| || ||||| ||||||||||||||    
T  922485 gacccataaacccattgtcttaggggtttggataagagtgtggtgt 922530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 11783646 - 11783601
Alignment:
Q  187 agaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||||||||||| ||| |||||| ||| ||||||||||||||||||    
T  11783646 agaggacccatacacctattgccataaagttttgggtaagagtgtg 11783601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 18932924 - 18932887
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcgg 153  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  18932924 tgttggtttgcaagtctgagttatatgtcccacatcgg 18932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 220
Target Start/End: Original strand, 29802604 - 29802637
Alignment:
Q  187 agaggacccataaacccattgccttaaggttttg 220  Q
    |||||||||||||||||| |||||||||||||||    
T  29802604 agaggacccataaacccaatgccttaaggttttg 29802637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 666 - 539
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  666 tgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 567  T
Q  230 gtggtgtttttcttgcttatgtggtttt 257  Q
    ||||||| ||||||||||  ||||||||    
T  566 gtggtgtctttcttgcttgagtggtttt 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 308 - 230
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacc 194  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  308 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 2e-51; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 3669679 - 3669810
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||    
T  3669679 tgttggtttgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaagg 3669778  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  3669779 ttttgggtaagagtgtggtgtctctcttgctt 3669810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 3670052 - 3670183
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||| ||| ||||||||    
T  3670052 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaagg 3670151  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  3670152 ttttgggtaagagtgtggtgtctctcttgctt 3670183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 20870741 - 20870600
Alignment:
Q  116 tgttggtttgcaattgtgagttatat--gtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 213  Q
    ||||||||||||| ||||||||||||  || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20870741 tgttggtttgcaagtgtgagttatatatgttccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaa 20870642  T
Q  214 ggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    | |||||| |||||||||||||| | |||||||| |||||||    
T  20870641 gattttggataagagtgtggtgtctctcttgcttgtgtggtt 20870600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 30441073 - 30441208
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatctta----taagtaagaggacccataaacccattgcctt 211  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||    ||||||||||| |||||||||||||||||||    
T  30441073 tgttggtttgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgcctt 30441172  T
Q  212 aaggttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||||||| | ||||||||    
T  30441173 aaggttttgggtaagagtgtggtgtctctcttgctt 30441208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 3038442 - 3038317
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3038442 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaagagt 3038343  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||  | | |||||||| |||||||    
T  3038342 gtggcatctctcttgcttgtgtggtt 3038317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 131 - 255
Target Start/End: Original strand, 34835216 - 34835340
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  34835216 gtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtg 34835315  T
Q  231 tggtgtttttcttgcttatgtggtt 255  Q
    ||||||   |||||||| |||||||    
T  34835316 tggtgtcactcttgcttgtgtggtt 34835340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 132 - 255
Target Start/End: Complemental strand, 33113517 - 33113394
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  33113517 tgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagattttgggtaagagtgt 33113418  T
Q  232 ggtgtttttcttgcttatgtggtt 255  Q
    ||||| | |||||||  |||||||    
T  33113417 ggtgtctctcttgctagtgtggtt 33113394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 34834882 - 34835007
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  34834882 tgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaagagt 34834981  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  34834982 gtggtgtctctcttgcttgtgtggtt 34835007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 70425 - 70301
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  70425 gtgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagtg 70326  T
Q  231 tggtgtttttcttgcttatgtggtt 255  Q
    ||  || | |||||||| |||||||    
T  70325 tgacgtctatcttgcttgtgtggtt 70301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 147457 - 147574
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  147457 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaagagt 147556  T
Q  230 gtggtgtttttcttgctt 247  Q
    |||| || | ||||||||    
T  147557 gtggcgtctctcttgctt 147574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 45122215 - 45122103
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||  |||||||||||||||    
T  45122215 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttttgggt 45122116  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  45122115 aagagtgtggtgt 45122103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 30359277 - 30359383
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  30359277 tgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaagagt 30359376  T
Q  230 gtggtgt 236  Q
    |||||||    
T  30359377 gtggtgt 30359383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 116 - 232
Target Start/End: Complemental strand, 1014037 - 1013921
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | |||||||||||||||| |||||||||||||||||  |    
T  1014037 tgttggtttgcaagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaagaggaccaataaacccattgccttagag 1013938  T
Q  216 ttttgggtaagagtgtg 232  Q
    ||||| |||||||||||    
T  1013937 ttttgagtaagagtgtg 1013921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 1014411 - 1014291
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| | || |||||| |    
T  1014411 tgttggtttgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaag 1014312  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||    
T  1014311 ttttgggtaagagtgtggtgt 1014291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 136 - 232
Target Start/End: Original strand, 5420663 - 5420759
Alignment:
Q  136 ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||    
T  5420663 ttatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgtaagagtgtg 5420759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 9309355 - 9309467
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||| |||||||||||||| | ||||    
T  9309355 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggacccttaaactcattgccttaaggtgtcgggt 9309454  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  9309455 aagagtgtggtgt 9309467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 18372142 - 18372029
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||||||||| |||||||  |||||||||||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||    
T  18372142 agttatatgtaccacatccaataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtgg 18372043  T
Q  234 tgtttttcttgctt 247  Q
    ||||| ||| ||||    
T  18372042 tgtttctctcgctt 18372029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 131 - 255
Target Start/End: Original strand, 34835481 - 34835606
Alignment:
Q  131 gtgagttatatgtcccacatcg-gataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||| ||  |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  34835481 gtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagt 34835580  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    |||||||   |||||||| |||||||    
T  34835581 gtggtgtcactcttgcttgtgtggtt 34835606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 131 - 255
Target Start/End: Original strand, 34835747 - 34835872
Alignment:
Q  131 gtgagttatatgtcccacatcg-gataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||| ||  |||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  34835747 gtgagttatatgtcccacgtcccgataaaatagtaaaggtttaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagt 34835846  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    |||||||   |||||||| |||||||    
T  34835847 gtggtgtcactcttgcttgtgtggtt 34835872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 130 - 243
Target Start/End: Complemental strand, 37544642 - 37544529
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||| | ||||||||||||||||||||    
T  37544642 tgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaagagt 37544543  T
Q  230 gtggtgtttttctt 243  Q
    ||||||| ||||||    
T  37544542 gtggtgtctttctt 37544529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 45122068 - 45121959
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||||| ||||||||    
T  45122068 tgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgggt 45121969  T
Q  224 aagagtgtgg 233  Q
    || |||||||    
T  45121968 aacagtgtgg 45121959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 138 - 255
Target Start/End: Original strand, 45122638 - 45122755
Alignment:
Q  138 atatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtt 237  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| ||     
T  45122638 atatggcccgcatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtc 45122737  T
Q  238 tttcttgcttatgtggtt 255  Q
    | |||||||| |||||||    
T  45122738 tctcttgcttgtgtggtt 45122755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 6877021 - 6876889
Alignment:
Q  124 tgcaattgtgagttatat-gtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttggg 222  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||| |||||||| || ||||| |||| |||||||||    
T  6877021 tgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagggttttggg 6876922  T
Q  223 taagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||||||| ||||| || |||||||    
T  6876921 taagagtgtggtgtttctcttgtttgtgtggtt 6876889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 9483320 - 9483233
Alignment:
Q  149 atcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9483320 atcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgt 9483233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 25561968 - 25561865
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt-gggtaagag 228  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||    
T  25561968 tgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggtaagag 25561869  T
Q  229 tgtg 232  Q
    ||||    
T  25561868 tgtg 25561865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 1514065 - 1513963
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||| |||||    
T  1514065 tgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaaaagtgt 1513966  T
Q  232 ggt 234  Q
    |||    
T  1513965 ggt 1513963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 9608745 - 9608867
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||    
T  9608745 tgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggt 9608844  T
Q  224 aagagtgtggtgtttttcttgct 246  Q
    | |||||||| || | |||||||    
T  9608845 atgagtgtggcgtctctcttgct 9608867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 40518588 - 40518690
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||| |||| || ||||||||||||||| ||||||| |||||||||||||||||||| || |||||||||||||||||||||    
T  40518588 tgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaagagt 40518687  T
Q  230 gtg 232  Q
    |||    
T  40518688 gtg 40518690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 30359615 - 30359740
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| |||||| ||||||| |||||| |||||||| ||||||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  30359615 tgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagt 30359714  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||| |||||| ||||    
T  30359715 gtggtgtctctcttacttatgcggtt 30359740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 9482755 - 9482639
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||  ||||||||    
T  9482755 gtgagttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgcctaaagattttgtataagagtg 9482656  T
Q  231 tggtgtttttcttgctt 247  Q
    |||| | | ||||||||    
T  9482655 tggtatctctcttgctt 9482639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 18371807 - 18371707
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    ||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  18371807 gtgagttatatgtcacacatcggataaaatagtaaaggttgaacat----taagtaagaagacccataaaccca-tgccttaaggttttgggtaagagtg 18371713  T
Q  231 tggtgt 236  Q
    ||||||    
T  18371712 tggtgt 18371707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 40518075 - 40518202
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaata--gtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaaga 227  Q
    |||||||||||||| |||||| |||||||| |  |||||||||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  40518075 tgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggtaaga 40518174  T
Q  228 gtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||| || | |||||||| |||||||    
T  40518175 gtgtggcgtctctcttgcttgtgtggtt 40518202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 255
Target Start/End: Original strand, 6731896 - 6732026
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||||||  |||||||||||||    
T  6731896 tgttgttttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttga---------aagtaagagaacccataaattcattgccttaagg 6731986  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||| ||||||||||||||| | ||||||||||| ||||    
T  6731987 ttttgagtaagagtgtggtgtctctcttgcttatgcggtt 6732026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 8918922 - 8918791
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||| |||||||||||| ||||  | |||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||||||||    
T  8918922 tgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggttttgggt 8918823  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||  || |||||||| | |||||||    
T  8918822 aagagtgtgacgtctttcttgcgtgtgtggtt 8918791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 118 - 236
Target Start/End: Complemental strand, 40579670 - 40579552
Alignment:
Q  118 ttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtt 217  Q
    ||||||| ||| ||||| ||||||||  || || |||||||||||||||||||||||| |||||||||||||||||||||||||  ||||| ||||||||    
T  40579670 ttggtttccaagtgtgaattatatgtttcatattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacttattgctttaaggtt 40579571  T
Q  218 ttgggtaagagtgtggtgt 236  Q
    || ||||||||||||||||    
T  40579570 ttaggtaagagtgtggtgt 40579552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 43274931 - 43274825
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||  |||||| ||||||| ||||||||||||| || ||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  43274931 tgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggttttgagtaagagt 43274832  T
Q  230 gtggtgt 236  Q
    |||||||    
T  43274831 gtggtgt 43274825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 18380169 - 18380064
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||| || || ||||||||| | ||||||||||||| ||||||||    
T  18380169 tgtgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaacccactaccttaaggttttgagtaagagt 18380070  T
Q  230 gtggtg 235  Q
    ||||||    
T  18380069 gtggtg 18380064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 124 - 229
Target Start/End: Original strand, 9308977 - 9309084
Alignment:
Q  124 tgcaattgtgagttatatgtcc--cacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgg 221  Q
    ||||| ||||||||||||||||  |||||| ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  9308977 tgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaacccattgcctaaaggttttgg 9309076  T
Q  222 gtaagagt 229  Q
    | ||||||    
T  9309077 gcaagagt 9309084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 41972158 - 41972292
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtt---ttg 220  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| | ||||||||||||||||||||| ||| |||   |||    
T  41972158 tgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccattgccataaagttttgttg 41972257  T
Q  221 ggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| ||   |||||||| |||||||    
T  41972258 ggtaagagtgtggcgtcactcttgcttgtgtggtt 41972292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 116 - 202
Target Start/End: Complemental strand, 41416335 - 41416251
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacc 202  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  41416335 tgttggtttgcaa--gtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacc 41416251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 45123006 - 45123108
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||| |||||||||||| |||  |||||||||||||||    
T  45123006 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacacct--taagtaagatgacccataaacctattttcttaaggttttgggt 45123103  T
Q  224 aagag 228  Q
    |||||    
T  45123104 aagag 45123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 8794117 - 8794223
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||||||| |||||||| | |  ||||||||||||||| |||||    
T  8794117 tgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgggtgagagt 8794216  T
Q  230 gtggtgt 236  Q
    | |||||    
T  8794217 gcggtgt 8794223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 118 - 250
Target Start/End: Original strand, 32305478 - 32305603
Alignment:
Q  118 ttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtt 217  Q
    ||||||||||| |||||||||||||||       |||||||||||||||||||||||| ||||||||||||| |||| ||||||||||| ||||||| ||    
T  32305478 ttggtttgcaagtgtgagttatatgtc-------ggataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagatt 32305570  T
Q  218 ttgggtaagagtgtggtgtttttcttgcttatg 250  Q
    |||| ||||||||||| || ||| || ||||||    
T  32305571 ttggataagagtgtggcgtctttattacttatg 32305603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 32640679 - 32640562
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||     | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32640679 tgtgagttatctgtctcacatcggataaaagagtaaaggttgaacat-----aggtaagaggaccgataaacccattgccttaaggttttgggtaagagt 32640585  T
Q  230 gtggtgtttttcttgcttatgtg 252  Q
    || | || | |||||||| ||||    
T  32640584 gttgcgtctctcttgcttttgtg 32640562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 147 - 255
Target Start/End: Original strand, 9609108 - 9609216
Alignment:
Q  147 acatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgct 246  Q
    ||||| |||| || ||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||| ||||||||||||| || | |||||||    
T  9609108 acatcagatagaaaagtaaaggttgaacatcttataagtaagatgacccataaacccatcgccttaatgttttcggtaagagtgtggcgtctctcttgct 9609207  T
Q  247 tatgtggtt 255  Q
      |||||||    
T  9609208 agtgtggtt 9609216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 18372754 - 18372656
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||| |||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||   |||||||||||||||||    
T  18372754 tgtgatttatatgttccatttcggataaaatagtaaaggttgaaca-cttataagtaagaggactcataaacccattgcc---aggttttgggtaagagt 18372659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 18373083 - 18372988
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||   ||||||||||||||||    
T  18373083 tgtgatttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggactcataaactcattgcc---aggttttgggtaagag 18372988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 141 - 232
Target Start/End: Complemental strand, 45121797 - 45121706
Alignment:
Q  141 tgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||| |  |||||||||||||| |||||||||||    
T  45121797 tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggatccataaacctacagccttaaggttttgagtaagagtgtg 45121706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 18372851 - 18372785
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggaccca 196  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18372851 tgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccca 18372785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 4154824 - 4154715
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| |||| || |||  ||||||||||  |||||||| | ||||||||||||| |||||||  ||||||||||||    
T  4154824 tgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagtgaaaggacccataaactcattgccccaaggttttgggt 4154725  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  4154724 aagagtgtgg 4154715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 6651510 - 6651617
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||         ||||| |||||||||  ||||||||||||||||||||||||||||    
T  6651510 gtgagttatatgtctcacatcggataaaatagtaaaggttgaaaat---------aagagaacccataaattcattgccttaaggttttgggtaagagtg 6651600  T
Q  231 tggtgtttttcttgctt 247  Q
    |||||| | ||||||||    
T  6651601 tggtgtctctcttgctt 6651617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 9507819 - 9507891
Alignment:
Q  161 agtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9507819 agtaaaggttgaataccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtgg 9507891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 5915872 - 5915990
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| |||| ||||||||  |||||| || ||||  |||||||    ||||||||||||| |||||||||||||||||||||    
T  5915872 tgcaagtgtgagttatatgtcctacattggataaaaatgtaaagttt-aacactttataag----aggacccataaactcattgccttaaggttttgggt 5915966  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||| | ||||||||    
T  5915967 aagagtgtggtgtctctcttgctt 5915990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 130 - 196
Target Start/End: Complemental strand, 18372408 - 18372342
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggaccca 196  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  18372408 tgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaagaccca 18372342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 3037853 - 3037776
Alignment:
Q  137 tatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaag 214  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||    
T  3037853 tatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacccattgtcttaag 3037776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 147829 - 147932
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| ||||||| |||||| |||||||| | |||||         |||||||||| ||||||||||||||||||||    
T  147829 tgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaacaacatataa---------cccataaacctattgccttaaggttttgggt 147919  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  147920 aagagtgtggtgt 147932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 25561792 - 25561729
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccat 197  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagtacccat 25561729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 20130455 - 20130553
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||| |||||||| |||||||||||||| |||||| |||||||| ||| ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  20130455 tgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 20130553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 43398223 - 43398112
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaa---gaggacccataaacccattgccttaaggttttgggtaag 226  Q
    |||||||||||| || || |||||||| || ||||||||||||||| ||||||| |||   |||||||||||||  ||||||||||| ||||||| ||||    
T  43398223 tgtgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataagaggaggacccataaattcattgccttaaagttttggataag 43398124  T
Q  227 agtgtggtgttt 238  Q
    | ||||| ||||    
T  43398123 aatgtggcgttt 43398112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 4154438 - 4154331
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| ||||| |||| || |||  ||||||||||  |||||||| ||| ||||||||||| |||||||||||  ||||||||    
T  4154438 tgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagtgaga-gacccataaactcattgccttaatattttgggt 4154340  T
Q  224 aagagtgtg 232  Q
    ||| |||||    
T  4154339 aagtgtgtg 4154331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 12283873 - 12283984
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| ||||||||||||||| || ||||||| |||||| |||||| |||||| |||||| | ||| ||||||| ||  | ||||||||||||| |    
T  12283873 tgcaagtgtaagttatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagtaaaatgacacataaactca-agtcttaaggttttggat 12283971  T
Q  224 aagagtgtggtgt 236  Q
    |||||||| ||||    
T  12283972 aagagtgtagtgt 12283984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 219
Target Start/End: Complemental strand, 9620834 - 9620739
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    ||||| ||||||||||||||| |||| | |||| || |||| | ||||| ||  |||||||| ||||||||||||||| |||||||||||| ||||    
T  9620834 tgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaactcattgccttaagatttt 9620739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 168
Target Start/End: Complemental strand, 18372523 - 18372485
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaagg 168  Q
    |||||||||||||||||||||||||||||||||||||||    
T  18372523 tgtgagttatatgtcccacatcggataaaatagtaaagg 18372485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Complemental strand, 18373292 - 18373236
Alignment:
Q  160 tagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggt 216  Q
    |||||||||||||||| ||||||| |||||||| |||| ||||||||| ||||||||    
T  18373292 tagtaaaggttgaacaccttataaataagaggatccattaacccattgtcttaaggt 18373236  T

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Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 12156745 - 12156702
Alignment:
Q  195 cataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  12156745 cataaacccattgtcttaaggttttgggtaagagtgtgatgttt 12156702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 223
Target Start/End: Original strand, 40991795 - 40991852
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||||||||  | |||||| |||||||||||||||||| ||||| ||||||||||||    
T  40991795 aggttgaacacttcataagtgagaggacccataaacccaatgcctcaaggttttgggt 40991852  T

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Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 5274783 - 5274883
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||| | |||| | |||||| || | ||||||||||  |||||| |  || ||||||||||  |||||||||||| ||||| ||||||||||    
T  5274783 tgagttatatgttctacattgaataaaaaaggagaggttgaacactttataaatgggaagacccataaaatcattgccttaagattttgagtaagagtgt 5274882  T
Q  232 g 232  Q
    |    
T  5274883 g 5274883  T

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Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 40579352 - 40579304
Alignment:
Q  199 aacccattgccttaaggttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||| | ||||||||||||||||||||| | ||||||||    
T  40579352 aacccattgccttaggattttgggtaagagtgtggtgtctctcttgctt 40579304  T

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Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 20995497 - 20995462
Alignment:
Q  201 cccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||||||||||||| ||||||||    
T  20995497 cccattgccttaaggttttgggtaagaatgtggtgt 20995462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 8919220 - 8919171
Alignment:
Q  206 tgccttaaggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||||||| |||||||||||||| | | |||||| |||||||    
T  8919220 tgccttaaggttttggataagagtgtggtgtctcttttgcttgtgtggtt 8919171  T

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Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 11442911 - 11442952
Alignment:
Q  182 aagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    |||| ||||||||||||||| || ||||||||||||||||||    
T  11442911 aagtgagaggacccataaactcaatgccttaaggttttgggt 11442952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 41129066 - 41129119
Alignment:
Q  202 ccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||| |||||||||||||||| ||||||||||| | |||| ||| |||||||    
T  41129066 ccattgtcttaaggttttgggtatgagtgtggtgtctctcttacttgtgtggtt 41129119  T

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Target: chr3 (Bit Score: 104; Significance: 2e-51; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 116 - 247
Target Start/End: Original strand, 22304561 - 22304692
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  22304561 tgttggtttgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaagg 22304660  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||||||||||| | ||||||||    
T  22304661 ttttgggtaagagtgtggtgtctctcttgctt 22304692  T

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Target: chr3; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 39389062 - 39389182
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| |||||||    
T  39389062 tgttggtttgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaagg 39389161  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||    
T  39389162 ttttgggtaagagtgtggtgt 39389182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 33803410 - 33803301
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| ||||||    
T  33803410 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgggt 33803311  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  33803310 aagagtgtgg 33803301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 35946528 - 35946645
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  35946528 tgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagt 35946627  T
Q  230 gtggtgtttttcttgctt 247  Q
    ||||||| | ||||||||    
T  35946628 gtggtgtctctcttgctt 35946645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 37991129 - 37991004
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  37991129 tgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaagagt 37991030  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | ||||||||||||||||    
T  37991029 gtggtgtctctcttgcttatgtggtt 37991004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 43346943 - 43346826
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  43346943 tgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagt 43346844  T
Q  230 gtggtgtttttcttgctt 247  Q
    ||||||| | ||||||||    
T  43346843 gtggtgtctctcttgctt 43346826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 29644739 - 29644608
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||    
T  29644739 tgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttttgggt 29644640  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||| || | ||||||||||| ||||    
T  29644639 aagagtgtggcgtctctcttgcttatgcggtt 29644608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 29645060 - 29644929
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  29645060 tgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggt 29644961  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||| || | ||||||||||| ||||    
T  29644960 aagagtgtggcgtctctcttgcttatgcggtt 29644929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 116 - 250
Target Start/End: Original strand, 4823647 - 4823781
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||| ||||||||||||     
T  4823647 tgttggtttgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaactcattgccttaaga 4823746  T
Q  216 ttttgggtaagagtgtggtgtttttcttgcttatg 250  Q
    ||||||||||||||||||||| ||| |||||||||    
T  4823747 ttttgggtaagagtgtggtgtcttttttgcttatg 4823781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 37990791 - 37990669
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  37990791 tgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagt 37990692  T
Q  230 gtggtgtttttcttgcttatgtg 252  Q
    ||||||| | |||||||| ||||    
T  37990691 gtggtgtctctcttgcttgtgtg 37990669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 15772854 - 15772985
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||||||||||||||||| |||||| |||||||||||| |    
T  15772854 tgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggat 15772953  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | |||||||| |||||||    
T  15772954 aagagtgtggtgtctctcttgcttgtgtggtt 15772985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 116 - 255
Target Start/End: Complemental strand, 39935123 - 39934982
Alignment:
Q  116 tgttggtttgcaattgtgag--ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaa 213  Q
    ||||||||||||| ||||||  |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  39935123 tgttggtttgcaagtgtgagagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaa 39935024  T
Q  214 ggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
     |||||| ||||||||||| ||| | |||||||| |||||||    
T  39935023 agttttgagtaagagtgtgatgtctctcttgcttgtgtggtt 39934982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 12114720 - 12114608
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| |||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  12114720 tgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggt 12114621  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  12114620 aagagtgtggtgt 12114608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 25739583 - 25739475
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| || |||||||||||    
T  25739583 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggttttgggt 25739484  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  25739483 aagagtgtg 25739475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 32589704 - 32589834
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||| |||||||||||||  ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32589704 tgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 32589802  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | ||| | |||||||| |||||||    
T  32589803 aagagtgcgatgtctctcttgcttgtgtggtt 32589834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 54017974 - 54017843
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||| |  |||||||||||||||||    
T  54017974 tgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttgggt 54017875  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | |||| ||| |||||||    
T  54017874 aagagtgtggtgtctctcttacttgtgtggtt 54017843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 52634682 - 52634783
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  52634682 tgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga-gacccataaacccattgccttaaggttttgggtaagagt 52634780  T
Q  230 gtg 232  Q
    |||    
T  52634781 gtg 52634783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 3135224 - 3135108
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||||||| |||| |||||||||| |||||||||    
T  3135224 gtgagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtg 3135125  T
Q  231 tggtgtttttcttgctt 247  Q
    |||||| | ||||||||    
T  3135124 tggtgtctctcttgctt 3135108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 8327904 - 8328016
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||  | ||||||||||||||||||    
T  8327904 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggttttgggt 8328003  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  8328004 aagagtgtggtgt 8328016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 42342546 - 42342438
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||||| |||||| |||||||||||||||    
T  42342546 tgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttgggt 42342447  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  42342446 aagagtgtg 42342438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 54018356 - 54018225
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||  |||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |  |||||||||||||||||    
T  54018356 tgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggttttgggt 54018257  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | || ||||| |||||||    
T  54018256 aagagtgtggtgtctctcatgcttgtgtggtt 54018225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 15773192 - 15773300
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||| ||||| | ||||||||||| |||||||||    
T  15773192 tgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaagttttgggt 15773291  T
Q  224 aagagtgtg 232  Q
    |||||||||    
T  15773292 aagagtgtg 15773300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 41359904 - 41359792
Alignment:
Q  143 tcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttct 242  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || | |||    
T  41359904 tcccacatcggatacaatagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctct 41359805  T
Q  243 tgcttatgtggtt 255  Q
     |||| |||||||    
T  41359804 cgcttgtgtggtt 41359792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 21832501 - 21832395
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||| ||||| || ||||||||||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  21832501 tgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggttttgggt 21832402  T
Q  224 aagagtg 230  Q
    |||||||    
T  21832401 aagagtg 21832395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 32463053 - 32462935
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaa-ggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    ||||||||||||||||||||||||||| || |||||| ||||||| | ||||||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  32463053 tgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttttgagtaagag 32462954  T
Q  229 tgtggtgtttttcttgctt 247  Q
    |||||||| | ||||||||    
T  32462953 tgtggtgtctctcttgctt 32462935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 51886552 - 51886645
Alignment:
Q  115 atgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgc 208  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  51886552 atgttggtttgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaactcattgc 51886645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 53577364 - 53577485
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| || |||| ||| ||||||||  ||||||||||||| ||||||    
T  53577364 tgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttgggt 53577463  T
Q  224 aagagtgtggtgtttttcttgc 245  Q
    ||||||||||||| | ||||||    
T  53577464 aagagtgtggtgtctctcttgc 53577485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 50612618 - 50612482
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccata-----aacccattgcct 210  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||     |||  |||  ||    
T  50612618 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaatctaacatattatct 50612519  T
Q  211 taaggttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||||||||||| ||| | ||||||||    
T  50612518 taaggttttgggtaagagtgtgatgtctctcttgctt 50612482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 22304100 - 22303990
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||| |||||||||||||||||       |||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  22304100 tgtgagttatatgtcccacatcagataaaatagtaaaggt-------cttataagtaagcggacccataaacccattgccttaaggttttggataagagt 22304008  T
Q  230 gtggtgtttttcttgctt 247  Q
    ||||||| | ||||||||    
T  22304007 gtggtgtctctcttgctt 22303990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 45395811 - 45395699
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| |||||||| |||||||||| |||||| |||||||||| ||||  ||||||||||||||| |||||||||||||| ||||| |||||||||    
T  45395811 tgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgttttgggt 45395712  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  45395711 aagagtgtggtgt 45395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 1634473 - 1634366
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaa-ggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttggg 222  Q
    ||||| ||||||||||||||||||||||||||| || | |||| |||| ||||  |||||||||||||||||||||||||||||| ||||||||||||||    
T  1634473 tgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttggg 1634374  T
Q  223 taagagtg 230  Q
    ||||||||    
T  1634373 taagagtg 1634366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 31190017 - 31190132
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||        |||||||||||||||||    
T  31190017 tgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata--------gccttaaggttttgggt 31190108  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||| | ||||||||    
T  31190109 aagagtgtggtgtctctcttgctt 31190132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 49336839 - 49336733
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||| ||||| ||||||||||| || |||||||||||| || ||||||||||||||||||||||||||||| | ||||| ||| |||||||||||    
T  49336839 tgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaagagt 49336740  T
Q  230 gtggtgt 236  Q
    |||||||    
T  49336739 gtggtgt 49336733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 39914252 - 39914364
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| |||||| ||||||| |||| |||||||||| ||||||| |||||||||||||||||| | ||||||||  |||||| |    
T  39914252 tgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaatattttggat 39914351  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  39914352 aagagtgtggtgt 39914364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 45901719 - 45901839
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaa-ggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    |||||||||||||||||||||||||||||| |  ||| ||||||||| ||||||||||||||||| ||||||| ||| ||||||| ||||| ||||||||    
T  45901719 tgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaactcatggccttaaagtttttggtaagag 45901818  T
Q  229 tgtggtgtttttcttgcttat 249  Q
    |||||||| | |||| |||||    
T  45901819 tgtggtgtctctcttacttat 45901839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 42342248 - 42342125
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| | |||||| ||||||||||||||| |||||| ||| ||   ||||||||||||||||| ||||||| |||||||||||||||||||||    
T  42342248 tgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggactcataaactcattgccttaaggttttgggt 42342149  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    |||||||||| || | ||||||||    
T  42342148 aagagtgtggcgtctctcttgctt 42342125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 125 - 236
Target Start/End: Complemental strand, 53118131 - 53118021
Alignment:
Q  125 gcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggta 224  Q
    |||| |||||||||||||| ||| ||||||||||| ||||||||||||||| ||||||||| ||||||  || ||||||||||||||||| |||||||||    
T  53118131 gcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtgagaggattca-aaacccattgccttaagattttgggta 53118033  T
Q  225 agagtgtggtgt 236  Q
    ||||||| ||||    
T  53118032 agagtgtagtgt 53118021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 42584970 - 42584868
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||||||||||||||| || ||||||| ||||||| |||||||||||||||| ||||||||| |||| |||||| ||||| | ||||||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaaccaattgtcttaagattttgagaaagagtgtgg 42584871  T
Q  234 tgt 236  Q
    |||    
T  42584870 tgt 42584868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 130 - 233
Target Start/End: Complemental strand, 32462711 - 32462607
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaa-ggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagag 228  Q
    ||||||||||||||||||||||| || ||| |||||| ||||||||| ||||||||||||| || ||||||||| ||||| |||||||||||| ||||||    
T  32462711 tgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatgatccataaacctattgctttaaggttttggataagag 32462612  T
Q  229 tgtgg 233  Q
    |||||    
T  32462611 tgtgg 32462607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 33175816 - 33175711
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggaccc---ataaacccattgccttaaggttttgggtaag 226  Q
    ||||||||||||||| |||||| |||| || ||||||||||||||| |||||||||||||| ||||   |||||| ||| ||||||||||||||||||||    
T  33175816 tgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaagagaacccataataaactcatagccttaaggttttgggtaag 33175717  T
Q  227 agtgtg 232  Q
    ||||||    
T  33175716 agtgtg 33175711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 37726495 - 37726577
Alignment:
Q  115 atgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccat 197  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||| ||||    
T  37726495 atgttggtttgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaagaggatccat 37726577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 22303759 - 22303698
Alignment:
Q  182 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttctt 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22303759 aagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttctctt 22303698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 25755400 - 25755517
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||| | ||||||||||||||||| |||||| |||||| | ||| ||| ||||||| |||    
T  25755400 tgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaaaagt 25755499  T
Q  230 gtggtgtttttcttgctt 247  Q
    |||| || | ||||||||    
T  25755500 gtggcgtctctcttgctt 25755517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 9240149 - 9240261
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| |||||||||||| |  |||||| | |||||| |||||||||||||||||||||||| ||||| ||||||| ||| || |    
T  9240149 tgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggacccataaatccattaccttaagatttcggat 9240248  T
Q  224 aagagtgtggtgt 236  Q
    |||| ||||||||    
T  9240249 aagaatgtggtgt 9240261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 33362425 - 33362349
Alignment:
Q  150 tcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaag 226  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  33362425 tcggataaaataataaaggttgaataccttataagtaagaggacccataaacccatttccttaagattttgggtaag 33362349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 3384432 - 3384317
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||| |||||  ||||||||||||||||||||  ||||||| |||| ||||| ||||  ||||||| ||||||||||||||||  | |||||||| |    
T  3384432 tgttggtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaacttaatgccttaaag 3384333  T
Q  216 ttttgggtaagagtgt 231  Q
    ||||||||||||||||    
T  3384332 ttttgggtaagagtgt 3384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 11661957 - 11662064
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg-ttttgggtaagag 228  Q
    ||||||||| ||| ||||||| |||||||| ||||||||||||||| |||| |||| ||||| | |||||||| |||||||||||| |||||||||||||    
T  11661957 tgtgagttaaatgccccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgccttaaggtttttgggtaagag 11662056  T
Q  229 tgtggtgt 236  Q
    || |||||    
T  11662057 tgaggtgt 11662064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 22304238 - 22304297
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 175  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22304238 tgttggtttgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaaca 22304297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 11661541 - 11661602
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagagg 191  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  11661541 tgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaagagg 11661602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 47964676 - 47964567
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||| |||||||| ||||||||| ||  ||  |||||||||    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  47964676 tgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattgccttaaggttttgggt 47964577  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  47964576 aagagtgtgg 47964567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 7767464 - 7767380
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggt 216  Q
    ||||||||||||||||||||||||| || ||||||||||| |||  |||||| ||||||||| ||||||||||||| ||||||||    
T  7767464 tgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacccattgtcttaaggt 7767380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 3135613 - 3135500
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataa-----gtaagaggaccc--ataaacccattgccttaaggttttggg 222  Q
    ||||||||||||||||||| || ||||||| |||||| |||||||| ||||| |     ||||||||||||  |||||||||||||||||||||||| |     
T  3135613 tgtgagttatatgtcccacctcagataaaagagtaaaagttgaacaccttattatattagtaagaggacccccataaacccattgccttaaggttttaga 3135514  T
Q  223 taagagtgtggtgt 236  Q
    ||||||||||||||    
T  3135513 taagagtgtggtgt 3135500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 124 - 221
Target Start/End: Complemental strand, 44160702 - 44160605
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgg 221  Q
    ||||| ||| ||||||||||  || || |||||||| | ||||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||    
T  44160702 tgcaagtgtcagttatatgtttcatattggataaaacaataaaggttgaacaccttataaataagaggatccataaacccattgtcttaaggttttgg 44160605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 46546477 - 46546369
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| |||| ||||  ||  ||  ||||||||||  |||||||| |||| | ||||||||||||||||||||||||||| ||||||||    
T  46546477 tgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataagttagagaatccataaacccattgccttaaggttttgtgtaagagt 46546378  T
Q  230 gtggtgttt 238  Q
    ||| |||||    
T  46546377 gtgatgttt 46546369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 39336387 - 39336280
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||| ||   |  ||||||||||  |||||||| |||||| |||||||| |||||| |||||||||||| |    
T  39336387 tgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaactcattgctttaaggttttggat 39336288  T
Q  224 aagagtgt 231  Q
    || |||||    
T  39336287 aatagtgt 39336280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 47965073 - 47964964
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||   |||||||||| || |||  ||||| |||||  ||||||| ||||| | ||||| |||||||||||||| ||||||||    
T  47965073 tgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataagcccattgccttaagattttgggt 47964974  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  47964973 aagagtgtgg 47964964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 52634993 - 52635050
Alignment:
Q  177 cttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggt 234  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  52634993 cttataaataagaggacccataaactcattgccttaagattttgggtaagagtgtggt 52635050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 43346650 - 43346706
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatctta 180  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  43346650 tgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacacctta 43346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 17732007 - 17731949
Alignment:
Q  179 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtt 237  Q
    |||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  17732007 tataagaaagggaacccataaacccattgccttaaggttttgagtaagagtgtggtgtt 17731949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 237
Target Start/End: Complemental strand, 19033238 - 19033180
Alignment:
Q  179 tataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtt 237  Q
    |||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  19033238 tataagaaagggaacccataaacccattgccttaaggttttgagtaagagtgtggtgtt 19033180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 54017636 - 54017594
Alignment:
Q  194 ccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  54017636 ccataaacccattgccttaaggttttgggtaagagtgtggtgt 54017594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 25991409 - 25991513
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||| ||||||||||||||  |||||  ||| || ||| ||||| |||||||| |||| ||| ||||||| | |||||||||||||||||| | |||    
T  25991409 tgtgagtaatatgtcccacatcaaataaacaagttaatgttaaacattttataagtgagagaacctataaacctaatgccttaaggttttgggttaaagt 25991508  T
Q  230 gtggt 234  Q
    |||||    
T  25991509 gtggt 25991513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 53596027 - 53596072
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||| || |||||||||||||||||||||||||||||    
T  53596027 gacccataaacccgttaccttaaggttttgggtaagagtgtggtgt 53596072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 53596342 - 53596387
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||| || |||||||||||||||||||||||||||||    
T  53596342 gacccataaacccgttaccttaaggttttgggtaagagtgtggtgt 53596387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 12749211 - 12749278
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||  ||||||||  ||||||||||||||| ||||| |||||||||| | |||||||||||    
T  12749211 aggttgaacactttataagtgtgaggacccataaaccaattgcattaaggtttttgataagagtgtgg 12749278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 48127906 - 48127855
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttct 242  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||| |||||    
T  48127906 gacccataaacccattgctttaatgttttggataagagtgtggtgtctttct 48127855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 16871049 - 16871003
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||    
T  16871049 acccataaactcattgccttaaggttttaggtaagagtgtcgtgttt 16871003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 17735081 - 17735035
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||    
T  17735081 acccataaactcattgacttaaggttttgggtaagagtgcggtgttt 17735035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 19036350 - 19036304
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||    
T  19036350 acccataaactcattgacttaaggttttgggtaagagtgcggtgttt 19036304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 39336086 - 39336016
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||  |||||| | | | ||| ||||||  ||||||||||||||||||||||||||||||||||    
T  39336086 aggttgaacactttataaatgataagactcataaaatcattgccttaaggttttgggtaagagtgtggtgt 39336016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 53596542 - 53596587
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  53596542 gacccataaacccattgacttaagattttaggtaagagtgtggtgt 53596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 238
Target Start/End: Complemental strand, 16869884 - 16869841
Alignment:
Q  195 cataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||| |||||||||||||||||| | |||||||||||||||    
T  16869884 cataaactcattgccttaaggttttgagcaagagtgtggtgttt 16869841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 16143505 - 16143551
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgtt 237  Q
    ||||||||| | ||||||||||| ||||||||||||||||| |||||    
T  16143505 gacccataagctcattgccttaaagttttgggtaagagtgtagtgtt 16143551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 25317164 - 25317270
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||| ||||||||| | |||  || |||  ||||||| ||  || ||| | |||||||||||||||   ||||||||||||||||||||| |||    
T  25317164 tgtgagttatgtgtcccacaccagatggaaaagtggaggttgagcactttgtaactgagaggacccataaacttgttgccttaaggttttgggtaaaagt 25317263  T
Q  230 gtggtgt 236  Q
    || ||||    
T  25317264 gtagtgt 25317270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 236
Target Start/End: Original strand, 11661603 - 11661632
Alignment:
Q  207 gccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||||||||||||||||    
T  11661603 gccttaaggttttgggtaagagtgtggtgt 11661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 1e-49; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 7517580 - 7517692
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7517580 tgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 7517679  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  7517680 aagagtgtggtgt 7517692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 118 - 246
Target Start/End: Original strand, 29157559 - 29157687
Alignment:
Q  118 ttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtt 217  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  29157559 ttggtttgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggtt 29157658  T
Q  218 ttgggtaagagtgtggtgtttttcttgct 246  Q
    ||||||||||||||||||| | |||||||    
T  29157659 ttgggtaagagtgtggtgtctctcttgct 29157687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 1085774 - 1085643
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  1085774 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggt 1085675  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||| || | |||| ||| |||||||    
T  1085674 aagagtgtggcgtctctcttacttgtgtggtt 1085643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 37533176 - 37533046
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  37533176 tgttggtttgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaagg 37533077  T
Q  216 ttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||||||||| |||||||||| | ||||||||    
T  37533076 ttttgggtaa-agtgtggtgtctctcttgctt 37533046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 23535 - 23414
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  23535 tgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgggt 23436  T
Q  224 aagagtgtggtgtttttcttgc 245  Q
    ||||||||||||| | ||||||    
T  23435 aagagtgtggtgtctctcttgc 23414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 124 - 253
Target Start/End: Original strand, 7554025 - 7554154
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||    
T  7554025 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgggt 7554124  T
Q  224 aagagtgtggtgtttttcttgcttatgtgg 253  Q
    ||||||||||||| | ||| |||| |||||    
T  7554125 aagagtgtggtgtctctctcgcttgtgtgg 7554154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 36939891 - 36939760
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  36939891 tgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggt 36939792  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    || |||||||||||| ||||||||||| ||||    
T  36939791 aaaagtgtggtgtttctcttgcttatgcggtt 36939760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 22566820 - 22566711
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22566820 tgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggt 22566721  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  22566720 aagagtgtgg 22566711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 11845198 - 11845314
Alignment:
Q  131 gtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtg 230  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  11845198 gtgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtg 11845297  T
Q  231 tggtgtttttcttgctt 247  Q
    |||||| | ||||||||    
T  11845298 tggtgtctctcttgctt 11845314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 116 - 236
Target Start/End: Original strand, 14681502 - 14681622
Alignment:
Q  116 tgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg 215  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||||    
T  14681502 tgttggtttgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaagg 14681601  T
Q  216 ttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||    
T  14681602 ttttgggtaagagtgtggtgt 14681622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 19122735 - 19122862
Alignment:
Q  127 aattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaag 226  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  19122735 aattatgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaag 19122833  T
Q  227 agtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||| | |||||||| |||||||    
T  19122834 agtgtggtgtctatcttgcttgtgtggtt 19122862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 30244276 - 30244382
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30244276 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagt 30244375  T
Q  230 gtggtgt 236  Q
    |||||||    
T  30244376 gtggtgt 30244382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 134 - 236
Target Start/End: Original strand, 6054570 - 6054672
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6054570 agttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtgg 6054669  T
Q  234 tgt 236  Q
    |||    
T  6054670 tgt 6054672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 30245083 - 30245189
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  30245083 tgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaagagt 30245182  T
Q  230 gtggtgt 236  Q
    |||||||    
T  30245183 gtggtgt 30245189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 47129101 - 47129207
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  47129101 tgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccatcgctttaaggttttgggtaggagt 47129200  T
Q  230 gtggtgt 236  Q
    |||||||    
T  47129201 gtggtgt 47129207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 37533531 - 37533410
Alignment:
Q  115 atgttggtttgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaag 214  Q
    |||||| |||| || |||||||||||||| | |||| | |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  37533531 atgttgatttgtaagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaag 37533432  T
Q  215 gttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||||||||    
T  37533431 gttttgggtaagagtgtggtgt 37533410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 130 - 255
Target Start/End: Original strand, 45754722 - 45754846
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||    
T  45754722 tgtgagttatatgtcc-acatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaagagt 45754820  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
    ||||||| | |||||||| |||||||    
T  45754821 gtggtgtctctcttgcttgtgtggtt 45754846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 22567196 - 22567074
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||    
T  22567196 tgcaagtgtgagtaatatgtcc-acatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttttggt 22567098  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    ||||||||||||| | ||||||||    
T  22567097 aagagtgtggtgtctctcttgctt 22567074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 16569196 - 16569308
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||    
T  16569196 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggt 16569295  T
Q  224 aagagtgtggtgt 236  Q
    ||||||| |||||    
T  16569296 aagagtgcggtgt 16569308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 16596466 - 16596354
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| ||||||||||| || ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||    
T  16596466 tgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggt 16596367  T
Q  224 aagagtgtggtgt 236  Q
    ||||||| |||||    
T  16596366 aagagtgcggtgt 16596354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 24177443 - 24177558
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  24177443 tgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaagtttttggtaagagtgt 24177542  T
Q  232 ggtgtttttcttgctt 247  Q
    || || | ||||||||    
T  24177543 ggcgtctctcttgctt 24177558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 36622960 - 36623071
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  36622960 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttttgggt 36623059  T
Q  224 aagagtgtggtg 235  Q
    | |||| |||||    
T  36623060 aggagtatggtg 36623071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 40094932 - 40094809
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||||||||||||| ||||||| |||||| |||||||||| |||| ||||||||||||||||||||||||||||| | |||||||||||||||    
T  40094932 tgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggttttgggt 40094833  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    |||||||||| || | ||||||||    
T  40094832 aagagtgtggcgtctctcttgctt 40094809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 34218186 - 34218080
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  34218186 tgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagt 34218087  T
Q  230 gtggtgt 236  Q
    |||||||    
T  34218086 gtggtgt 34218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 45434646 - 45434744
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  45434646 agttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaagagtgtg 45434744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 40230449 - 40230328
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| ||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  40230449 tgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttgggt 40230350  T
Q  224 aagagtgtggtgtttttcttgc 245  Q
    || ||| |||||| | ||||||    
T  40230349 aaaagtctggtgtctctcttgc 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 45433247 - 45433364
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||| ||||||||||| ||||||||||||||    
T  45433247 tgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaagagt 45433346  T
Q  230 gtggtgtttttcttgctt 247  Q
    ||||||| | ||||||||    
T  45433347 gtggtgtctctcttgctt 45433364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 139 - 243
Target Start/End: Complemental strand, 1085391 - 1085287
Alignment:
Q  139 tatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||||| |||||||||||||||||| |||||||| || ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  1085391 tatgtcccatatcggataaaatagtaaaagttgaacaactcataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgttt 1085292  T
Q  239 ttctt 243  Q
     ||||    
T  1085291 ctctt 1085287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 8128599 - 8128468
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||||||| |||||||| || | ||||||||||||| |||||| ||||||||||||||||||||||  |||||||||||||| |    
T  8128599 tgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttggtt 8128500  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||||   ||| ||||||||||||    
T  8128499 aagagtgtggtgtcactctcgcttatgtggtt 8128468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 9901651 - 9901765
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||| ||||| |||||||| ||||| |||||||||||||||||||||    
T  9901651 tgtgagttatatgtcc-acatcggataaaacagtaaaggttgaacatcttatacgta-gaggatccataaactcattgtcttaaggttttgggtaagagt 9901748  T
Q  230 gtggtgtttttcttgct 246  Q
    ||||||| | |||||||    
T  9901749 gtggtgtctctcttgct 9901765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 118459 - 118350
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||| |||||||||||||||||| |||| || ||||||||||||||| || ||||||||||||| ||||||||||||| || |||||||||||||    
T  118459 tgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgggt 118360  T
Q  224 aagagtgtgg 233  Q
    ||||||||||    
T  118359 aagagtgtgg 118350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 134 - 255
Target Start/End: Complemental strand, 24838850 - 24838728
Alignment:
Q  134 agttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaag-aggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||| ||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||||||| ||| ||||||||||||||||||||||||    
T  24838850 agttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaagagtgtg 24838751  T
Q  233 gtgtttttcttgcttatgtggtt 255  Q
      || | |||||||| |||||||    
T  24838750 acgtctctcttgcttgtgtggtt 24838728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 30032573 - 30032675
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||||| | ||||||||| || |||||||||||||||||||||||    
T  30032573 tgtgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgggtaagagt 30032672  T
Q  230 gtg 232  Q
    |||    
T  30032673 gtg 30032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 36534930 - 36534833
Alignment:
Q  136 ttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    ||||||||||||| |||||||||| |||| |||||||||| |||||||||||||||||||||||||| |  | |||||||||||||||||||||||||    
T  36534930 ttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttgggtaagagtgtgg 36534833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 41910746 - 41910657
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggtttt 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | ||||||| | ||||||||||||||||||||| |||||| ||||    
T  41910746 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaacccattggcttaagatttt 41910657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 28301701 - 28301613
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgcctta 212  Q
    ||||| ||||||||||||||| ||||||||||| || |||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  28301701 tgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaacccattgcctta 28301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 124 - 225
Target Start/End: Original strand, 43241495 - 43241596
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| ||||||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||  |||| ||||||||||| |||    
T  43241495 tgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattgacttaaggttttaggt 43241594  T
Q  224 aa 225  Q
    ||    
T  43241595 aa 43241596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 20599320 - 20599439
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggta--aga 227  Q
    |||||||||||||||||| ||||||||||| |||||||| | ||||  |||||| |||||||||  |||||| ||||||||||| ||||||||||  |||    
T  20599320 tgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataagaggacatataaactcattgccttaacgttttgggtaagaga 20599419  T
Q  228 gtgtggtgtttttcttgctt 247  Q
    ||||||||| | ||||||||    
T  20599420 gtgtggtgtctctcttgctt 20599439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 30253534 - 30253604
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||| | |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30253534 aggttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgt 30253604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 30245494 - 30245567
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccat 197  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||| |||||    
T  30245494 tgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagagggcccat 30245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 124 - 197
Target Start/End: Original strand, 30255339 - 30255412
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccat 197  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||    
T  30255339 tgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagggcccat 30255412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 41854643 - 41854742
Alignment:
Q  132 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgt 231  Q
    |||||||||||||||||||| | ||||| ||||||||||||||| |||||||| |||| |||| |||||   | ||||||||||||||||||||||||||    
T  41854643 tgagttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataagcaagatgacctataaatataatgccttaaggttttgggtaagagtgt 41854741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 124 - 194
Target Start/End: Original strand, 30244701 - 30244771
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacc 194  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||||||||||    
T  30244701 tgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggacc 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 36109075 - 36109007
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagagga 192  Q
    ||||| |||||||||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||    
T  36109075 tgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 44361615 - 44361517
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    |||||| |||||||| |||||||||||||| |||||| |||||||| ||| ||||||||| || ||||||||||||  ||||| |||||| |||||||||    
T  44361615 tgtgagatatatgtctcacatcggataaaagagtaaaagttgaacacctt-taagtaagatgatccataaacccataaccttacggttttaggtaagagt 44361517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 28300366 - 28300302
Alignment:
Q  170 tgaacatcttataagtaagaggaccc-ataaacccattgccttaaggttttgggtaagagtgtgg 233  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||    
T  28300366 tgaacaccttataagtaagagaaccccataaacccattgccttaagattttgggtaagagtgtgg 28300302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 37167808 - 37167904
Alignment:
Q  145 ccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttg 244  Q
    ||||||| |||||||||||||| ||||||||       |||||||||| ||||||| |||||| ||||| |||||||||||||||||||||| | |||||    
T  37167808 ccacatcagataaaatagtaaatgttgaacag------agtaagaggatccataaatccattgacttaaagttttgggtaagagtgtggtgtctctcttg 37167901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 21416232 - 21416187
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  21416232 gacccataaacccattgccttagggttttgggtaagagtgtggtgt 21416187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 23569091 - 23569052
Alignment:
Q  193 cccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  23569091 cccataaacccattgccttaaggttttgggtaagagtgtg 23569052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 21619136 - 21619091
Alignment:
Q  191 gacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  21619136 gacccataaacccattgtcttaaggttttgggtaaaagtgtggtgt 21619091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 14681281 - 14681324
Alignment:
Q  118 ttggtttgcaattgtgagttatatgtcccacatcggataaaata 161  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||    
T  14681281 ttggtttgcaagtgtgagttatatgtcccacattggataaaata 14681324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 4124192 - 4124134
Alignment:
Q  178 ttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    |||||||| |||||||| |||||| |||||| |||||||||||| ||| ||||||||||    
T  4124192 ttataagtgagaggaccaataaactcattgcattaaggttttggataaaagtgtggtgt 4124134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 27391859 - 27391813
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgttt 238  Q
    ||||||||| ||| |||||||||||||| ||||||||||||||||||    
T  27391859 acccataaatccactgccttaaggttttaggtaagagtgtggtgttt 27391813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 37345960 - 37346026
Alignment:
Q  166 aggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 232  Q
    ||||| ||||| |||||||| ||| |||||||||||  |||||||||| |||||| |||||||||||    
T  37345960 aggttaaacattttataagtgagaagacccataaacatattgccttaaagttttgagtaagagtgtg 37346026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 174
Target Start/End: Complemental strand, 40094552 - 40094502
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaac 174  Q
    ||||| |||||||||||||||| ||||| ||||||| ||||||||||||||    
T  40094552 tgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 47129450 - 47129492
Alignment:
Q  205 ttgccttaaggttttgggtaagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||||||||||||||||||||| | ||||||||    
T  47129450 ttgccttaaggttttgggtaagagtgtggtgtctctcttgctt 47129492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 40094503 - 40094440
Alignment:
Q  192 acccataaacccattgccttaaggttttgggtaagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||| |||| | |||| ||||||||||||||||||  || |||||| |||||||||||    
T  40094503 acccataaactcattactttaaagttttgggtaagagtgtgacgtctttcttacttatgtggtt 40094440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 28300644 - 28300595
Alignment:
Q  207 gccttaaggttttggg-taagagtgtggtgtttttcttgcttatgtggtt 255  Q
    |||||||||||||||| |||||||||||||| | |||||||| |||||||    
T  28300644 gccttaaggttttggggtaagagtgtggtgtctctcttgcttgtgtggtt 28300595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 36967381 - 36967344
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaag 167  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  36967381 tgtgagttatatgtctcacatcggataaaaaagtaaag 36967344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 86; Significance: 1e-40; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 130 - 255
Target Start/End: Complemental strand, 1258 - 1133
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 229  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||||    
T  1258 tgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgggtaagagt 1159  T
Q  230 gtggtgtttttcttgcttatgtggtt 255  Q
     |||||| | ||||| ||||||||||    
T  1158 atggtgtctctcttgtttatgtggtt 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 1802 - 1737
Alignment:
Q  171 gaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgt 236  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1802 gaacaccttataagtgagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgt 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 3137 - 3091
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacat 176  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  3137 tgtgagttatatgtcccacatcggataaaagagtaaaggttgaacat 3091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 85; Significance: 4e-40; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 5357 - 5469
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| |||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |    
T  5357 tgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggat 5456  T
Q  224 aagagtgtggtgt 236  Q
    |||||||||||||    
T  5457 aagagtgtggtgt 5469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 4982 - 5113
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||||||||| ||||||||| | || |||||||||| || ||||||||||||| | ||||||||||| |||||||||| ||||||||||    
T  4982 tgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaactcattgccttatggttttgggt 5081  T
Q  224 aagagtgtggtgtttttcttgcttatgtggtt 255  Q
    ||||||||||||| | ||| ||||||| ||||    
T  5082 aagagtgtggtgtctctctcgcttatgcggtt 5113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 79; Significance: 2e-36; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 124 - 214
Target Start/End: Original strand, 5777 - 5867
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaag 214  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5777 tgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaag 5867  T

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Target: scaffold0734; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 5396 - 5520
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgcctt-aaggttttggg 222  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||| ||| ||| |||||||    
T  5396 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagggcccataaacatattgtcttaaagtttttggg 5495  T
Q  223 taagagtgtggtgtttttcttgctt 247  Q
    |||||||||||||| | ||||||||    
T  5496 taagagtgtggtgtctctcttgctt 5520  T

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Target: scaffold0171 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 17614 - 17500
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaagg--ttttgg 221  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||  ||||||    
T  17614 tgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccatagccttaaggttttttgg 17515  T
Q  222 gtaagagtgtggtgt 236  Q
    |||||||| ||||||    
T  17514 gtaagagtatggtgt 17500  T

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Target: scaffold0027 (Bit Score: 68; Significance: 6e-30; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 124 - 247
Target Start/End: Original strand, 47360 - 47483
Alignment:
Q  124 tgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 223  Q
    ||||| ||||| ||| ||||| |||||| ||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||| |||||||||    
T  47360 tgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaagagaatccataaacccattgccttaaagttttgggt 47459  T
Q  224 aagagtgtggtgtttttcttgctt 247  Q
    || | |||||||| | ||||||||    
T  47460 aaaaatgtggtgtctctcttgctt 47483  T

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Target: scaffold0504 (Bit Score: 56; Significance: 9e-23; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 130 - 201
Target Start/End: Complemental strand, 10263 - 10192
Alignment:
Q  130 tgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaac 201  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||    
T  10263 tgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaac 10192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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