View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15840_high_12 (Length: 286)
Name: NF15840_high_12
Description: NF15840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15840_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 5836225 - 5836485
Alignment:
| Q |
14 |
aattgaaaaatcttacactttgactaatagaaccaccattgtaactgaatccagctttggaagactcaaattccaacccaagttgaaaattctgtac--- |
110 |
Q |
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| T |
5836225 |
aattgaaaaatcttacactttgactaatagaaccaccattgtaactgaatccagctttggaagactcaaattccaacccaagttgaaaattctgtacctg |
5836324 |
T |
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| Q |
111 |
ctgttgttgaacaggaacaacactatcaccaacatagcttttttgaggaacaccataatgatcnnnnnnnnnnnnnnnnnnactatactcatcatgatga |
210 |
Q |
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| T |
5836325 |
ctgttgttgaacaggaacaacactatcaccaacatagcttttttgaggaacaccataatgatcttgttgttgttgttgttgactatactcatcatgatga |
5836424 |
T |
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| Q |
211 |
tgagtattattggtattgaaagtgttttcatcaccaccacaagaattacaatcaacaaggt |
271 |
Q |
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| T |
5836425 |
tgagtattattggtagtgaaagtgttttcatcaccaccacaagaattacaatcaacaaggt |
5836485 |
T |
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