View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15841_high_1 (Length: 315)
Name: NF15841_high_1
Description: NF15841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15841_high_1 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 82 - 315
Target Start/End: Original strand, 38052025 - 38052258
Alignment:
| Q |
82 |
tgtcaagagcacaagattcaattctcaaatacatgatgaagattatgacaatatgcaaagctcaaggttttgtctatggtattgttccagagaaaggaaa |
181 |
Q |
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| T |
38052025 |
tgtcaagagcacaagattcaattctcaaatacatgatgaagattatgacaatatgcaaagctcaaggttttgtctatggtattgttccagagaaaggaaa |
38052124 |
T |
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| Q |
182 |
accagtaacaggttcttcagaaagcttgcgtgaatggtggaaagaacaagttaaattcagtcaaaatgcaccagctgcagtttccaaatacttaccatca |
281 |
Q |
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| T |
38052125 |
accagtaacaggttcttcagaaagcttgcgtgaatggtggaaagaacaagttaaattcagtcaaaatgcaccagctgcagtttccaaatacttaccatca |
38052224 |
T |
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| Q |
282 |
tcactcttagaaaatcaacaagagttagaattat |
315 |
Q |
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| T |
38052225 |
tcactcttagaaaatcaacaagagttagaattat |
38052258 |
T |
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