View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15841_high_4 (Length: 224)
Name: NF15841_high_4
Description: NF15841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15841_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 5162237 - 5162443
Alignment:
| Q |
1 |
tatgcagactcagaaatattgaagacttcattatgaacttaatatcatgttaatagtctcattgaaatgtggttgtacttgtacacttgtactagttaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5162237 |
tatgcagactcagaaatattgaagacttcattatgaacttaatatcatgttaatagtctcattgaaatgtggttgtacttgtacacttgtactagttaat |
5162336 |
T |
|
| Q |
101 |
tatgttatcaattatcttagtactggacctcgactaagtatgagaatgatgttagtttattgtaacacgtattattatcaaatctcttattatttgtggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
5162337 |
tatgttatcaattatcttagtactggacctcgactaagtatgagaatgatgttagtttattgtaacacgtattattatcaaatctcttattatttgtggt |
5162436 |
T |
|
| Q |
201 |
ttctttc |
207 |
Q |
| |
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||||||| |
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|
| T |
5162437 |
ttctttc |
5162443 |
T |
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