View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15843_low_8 (Length: 219)
Name: NF15843_low_8
Description: NF15843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15843_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 38816344 - 38816155
Alignment:
| Q |
18 |
ttggctactttttgtggttacagttggtatacatcacggccttatgtaaattaaactgactttgtctgttagagaagggtatatagttgtatgaggtttc |
117 |
Q |
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| T |
38816344 |
ttggctactttttgtggttacagttggtatacatcacggccttatgtaaattaaactgactttgtctgttagagaagggtatatagttgtatgaggtttc |
38816245 |
T |
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| Q |
118 |
tttgggtaggtgagaaattgaggttcaaaggatacaatataccttttcttgcattttctttcactgagttatgataattgtgcatgtgat |
207 |
Q |
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| T |
38816244 |
tttgggtaggtgagaaattgaggttcaaaggatacaatataccttttcttgcattttctttcactgagttatgataattgtgcatgtgat |
38816155 |
T |
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