View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15845_low_19 (Length: 209)
Name: NF15845_low_19
Description: NF15845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15845_low_19 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 44954897 - 44954804
Alignment:
| Q |
34 |
cagagtaagaaatagcagaggaaagtgaagggaagtgaaaaaccttactctatgatgggg-atatatagtaaaatttcacacgttcttttgcag |
126 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
44954897 |
cagagtaagaaatagcagaggaaagtgaagggaagtgaaaatccttactctatgatggggtatatatagtaaaatttcacacgttcttttgcag |
44954804 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University