View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15847_low_12 (Length: 210)
Name: NF15847_low_12
Description: NF15847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15847_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 113 - 195
Target Start/End: Complemental strand, 26579414 - 26579332
Alignment:
| Q |
113 |
tagccatcatttctcaataatagaaccaattacttaccttaccaaacatatcaaccttattgttattatttaattaaacaaac |
195 |
Q |
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| T |
26579414 |
tagccatcatttctcaataatagaaccaattacttaccttaccaaacatatcaaccttattgttattatttaattaaacaaac |
26579332 |
T |
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Target: chr6; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 26579514 - 26579454
Alignment:
| Q |
13 |
gagatgaatagttgaatctgtttgttttgatgcacagaaccagacaagttctacttttcat |
73 |
Q |
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| T |
26579514 |
gagatgaatagttgaatctgtttgttttgatgcacagaaccagacaagttctacttttcat |
26579454 |
T |
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