View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15849_high_7 (Length: 348)
Name: NF15849_high_7
Description: NF15849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15849_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 319
Target Start/End: Complemental strand, 5942000 - 5941682
Alignment:
| Q |
1 |
gtttcaaataaagtggtgtacattaaagctaatgttagttttaatatgtacaaaactacaagaaacgtaacctatcaatgttggtccactattattgtat |
100 |
Q |
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| T |
5942000 |
gtttcaaataaagtggtgtacattaaagctaatgttggttttaatatgtacaaaactacaagaaatgtaacctatcaatgttggtccactattattgtat |
5941901 |
T |
|
| Q |
101 |
ggtcaatttaatattttggagacagtgttataaacaatttttattgatgttataatgtattgtaccggacgaactatcttttcctttgtatattagggta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
5941900 |
ggtcaatttaatattttggagacagtgttataaacaatttttattgatgttataatgtattgtaccggacgaattatcttttcctttgtatattagggta |
5941801 |
T |
|
| Q |
201 |
acataaataagaagttgttgtaatgagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattcaaattattt |
300 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5941800 |
acataaataaggagttgttgtaatgagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattcaaattattt |
5941701 |
T |
|
| Q |
301 |
tattaatcaatgttatggt |
319 |
Q |
| |
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||||||||||||||||||| |
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| T |
5941700 |
tattaatcaatgttatggt |
5941682 |
T |
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