View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15855_high_1 (Length: 756)

Name: NF15855_high_1
Description: NF15855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15855_high_1
NF15855_high_1
[»] chr6 (69 HSPs)
chr6 (18-325)||(4563525-4563832)
chr6 (18-252)||(4592118-4592352)
chr6 (529-740)||(4461384-4461592)
chr6 (529-740)||(4613381-4613589)
chr6 (529-720)||(4579713-4579901)
chr6 (529-740)||(4598432-4598640)
chr6 (531-724)||(4592508-4592698)
chr6 (529-720)||(4557406-4557594)
chr6 (529-724)||(4563988-4564180)
chr6 (531-740)||(4602050-4602256)
chr6 (529-721)||(4626231-4626420)
chr6 (539-740)||(4585897-4586095)
chr6 (529-721)||(4514784-4514973)
chr6 (529-724)||(3172018-3172210)
chr6 (530-720)||(4571253-4571440)
chr6 (529-740)||(4470064-4470272)
chr6 (529-724)||(4574585-4574777)
chr6 (530-740)||(4480954-4481161)
chr6 (531-740)||(4266831-4267037)
chr6 (529-724)||(4622419-4622611)
chr6 (531-721)||(4299486-4299673)
chr6 (531-721)||(4457874-4458061)
chr6 (18-142)||(4585633-4585757)
chr6 (539-724)||(4560783-4560964)
chr6 (529-725)||(4259817-4260010)
chr6 (529-721)||(4506137-4506326)
chr6 (531-739)||(4568318-4568523)
chr6 (529-740)||(4490018-4490226)
chr6 (531-740)||(4516582-4516788)
chr6 (531-740)||(4617283-4617489)
chr6 (19-156)||(4579414-4579552)
chr6 (18-142)||(4560503-4560627)
chr6 (18-142)||(4613729-4613853)
chr6 (18-142)||(4557122-4557246)
chr6 (531-740)||(4504062-4504268)
chr6 (18-139)||(4480693-4480814)
chr6 (48-141)||(4570970-4571063)
chr6 (18-142)||(4574305-4574429)
chr6 (447-518)||(4572206-4572277)
chr6 (626-740)||(4256371-4256482)
chr6 (18-133)||(4504408-4504523)
chr6 (18-142)||(4598168-4598292)
chr6 (32-139)||(4617022-4617129)
chr6 (18-136)||(3171744-3171862)
chr6 (44-139)||(4492955-4493050)
chr6 (447-518)||(4586872-4586943)
chr6 (197-325)||(4613888-4614017)
chr6 (610-740)||(4493216-4493343)
chr6 (447-518)||(4558365-4558436)
chr6 (322-373)||(4563395-4563446)
chr6 (278-325)||(4592069-4592116)
chr6 (18-139)||(4516321-4516442)
chr6 (44-136)||(4267203-4267295)
chr6 (18-133)||(4490366-4490481)
chr6 (88-139)||(4515202-4515253)
chr6 (20-139)||(4601789-4601908)
chr6 (83-142)||(4606967-4607026)
chr6 (33-135)||(4392052-4392154)
chr6 (18-136)||(4622145-4622263)
chr6 (18-139)||(4461123-4461244)
chr6 (78-139)||(4505857-4505918)
chr6 (18-136)||(4625954-4626072)
chr6 (83-136)||(4299816-4299869)
chr6 (447-518)||(4612541-4612612)
chr6 (44-133)||(4469809-4469898)
chr6 (640-718)||(4391901-4391976)
chr6 (49-120)||(4568072-4568143)
chr6 (447-518)||(4581254-4581325)
chr6 (413-446)||(4591878-4591911)
[»] scaffold0477 (2 HSPs)
scaffold0477 (527-740)||(4347-4557)
scaffold0477 (22-136)||(4701-4815)
[»] scaffold0288 (2 HSPs)
scaffold0288 (531-721)||(3384-3571)
scaffold0288 (18-136)||(3730-3848)
[»] chr3 (2 HSPs)
chr3 (531-740)||(1281375-1281581)
chr3 (18-139)||(1281114-1281235)
[»] chr8 (8 HSPs)
chr8 (531-740)||(1674487-1674693)
chr8 (529-740)||(20863506-20863714)
chr8 (539-720)||(16685940-16686118)
chr8 (18-139)||(1674226-1674347)
chr8 (32-142)||(20863868-20863978)
chr8 (72-142)||(16686332-16686402)
chr8 (447-515)||(16685104-16685172)
chr8 (669-707)||(1969143-1969181)
[»] chr5 (4 HSPs)
chr5 (531-740)||(24103260-24103466)
chr5 (531-740)||(27999764-27999970)
chr5 (18-139)||(28000110-28000231)
chr5 (44-136)||(24103002-24103094)
[»] chr7 (2 HSPs)
chr7 (531-706)||(3086715-3086887)
chr7 (44-133)||(3086426-3086515)
[»] scaffold0475 (2 HSPs)
scaffold0475 (670-718)||(3485-3533)
scaffold0475 (529-618)||(3172-3261)


Alignment Details
Target: chr6 (Bit Score: 284; Significance: 1e-159; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 18 - 325
Target Start/End: Complemental strand, 4563832 - 4563525
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4563832 gaaagaagatgcggcaaaaggcaattgagttgaagaagaaagtggaggaaaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 4563733  T
Q  118 ggaggttttgcttaaacaaaatcaatttaagtaacttttttatgcaattcagttcaacgataagtcattgatcttcccctattgaatttaagttctgatg 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  4563732 ggaggttttgcttaaacaaaatcaatttaagtaacttttttatgcaattcagttcaacgataattaattgatcttcccctattgaatttaagttctgatg 4563633  T
Q  218 taagtgaagtcatcttcagcaagagttcctgaacttaaatagtgattcttgctaattttaaatgttttgaatatatgcatattggataattatatggcat 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4563632 taagtgaagtcatcttcagcaagagttcctgaacttaaatagtgattcttgctaattttaagtgttttgaatatatgcatattggataattatatggcat 4563533  T
Q  318 gtatatta 325  Q
    ||||||||    
T  4563532 gtatatta 4563525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 4592352 - 4592118
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| |  |||||||||| |||||||||||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  4592352 gaaagaagatgaggaaaaaggcaatcgagttgaagaagaaggcagaggagaacacgagacctggaggttgttcatatatgaacttggacaaattgatcaa 4592253  T
Q  118 ggaggttttgcttaaacaaaatc-aatttaagtaacttttttatgcaattcagttcaacgataagtcattgatcttcccctattgaatttaagttctgat 216  Q
    |||||| ||||||||| |||||| ||||||||||| ||||||||||||  ||||||||| |||| | |||||||||||||||||||||||||||  ||||    
T  4592252 ggaggtgttgcttaaataaaatcaaatttaagtaa-ttttttatgcaaagcagttcaacaataattgattgatcttcccctattgaatttaagtgatgat 4592154  T
Q  217 gtaagtgaagtcatcttcagcaagagttcctgaact 252  Q
    ||||||||| ||||||||||||||||||||| ||||    
T  4592153 gtaagtgaactcatcttcagcaagagttcctaaact 4592118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 529 - 740
Target Start/End: Complemental strand, 4461592 - 4461384
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||| | |||||||||| |||||||||||||||| |||||  || |||||||||| ||||||||||||||||||||| |||||||||||||| | ||    
T  4461592 cctttttatggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaag 4461493  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccaga 728  Q
     | ||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||    
T  4461492 ctggtgtccgcaagagcaagtactgaaccacccttca---attggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctgga 4461396  T
Q  729 gtgccgatgttg 740  Q
    ||||||||||||    
T  4461395 gtgccgatgttg 4461384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 529 - 740
Target Start/End: Original strand, 4613381 - 4613589
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||  ||||    
T  4613381 cctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcgag 4613480  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccaga 728  Q
     | |||||  |||||||||||| | ||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  4613481 ctggtgtcctcaagagcaagtattaaaccacccttca---attggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctgga 4613577  T
Q  729 gtgccgatgttg 740  Q
    ||||| ||||||    
T  4613578 gtgccaatgttg 4613589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 529 - 720
Target Start/End: Complemental strand, 4579901 - 4579713
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| | ||||||||||| || ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  4579901 cctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacgag 4579802  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatat 720  Q
     | ||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  4579801 ctggtgtccgcaagagcaagtactgaaccacccttca---attggtggattcttgactcattgcggatggaactcaatcactgaaagcatat 4579713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 529 - 740
Target Start/End: Complemental strand, 4598640 - 4598432
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| || |  | ||    
T  4598640 cctttttgtggatcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcttagttgcaag 4598541  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccaga 728  Q
     | ||||||||||||||||||| | ||||| ||||||   |||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| ||    
T  4598540 ctggtgtctgcaagagcaagtattaaaccatccttca---attggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccgga 4598444  T
Q  729 gtgccgatgttg 740  Q
    ||||| ||||||    
T  4598443 gtgccaatgttg 4598432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 531 - 724
Target Start/End: Complemental strand, 4592698 - 4592508
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| |||||||||| |||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||| ||||  |||| |    
T  4592698 tttttgtggatcattaggcctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagct 4592599  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgc 724  Q
     |||||  |||||||||||| | ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4592598 ggtgtcctcaagagcaagtattaaaccacccttca---attggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgc 4592508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 529 - 720
Target Start/End: Complemental strand, 4557594 - 4557406
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||  || |    
T  4557594 cctttttgtggatcattaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcggg 4557495  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatat 720  Q
     | ||| | ||||||||||||| | ||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4557494 ctggtgcccgcaagagcaagtattaaaccatccttca---attggtggattcttgactcattgtggatggaactcaaccactgaaagcatat 4557406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 529 - 724
Target Start/End: Complemental strand, 4564180 - 4563988
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||||  | ||    
T  4564180 cctttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaag 4564081  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgc 724  Q
    || |||||  || ||| ||||| ||||||||||||||   ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4564080 ttggtgtccacaggagaaagtattgaaccacccttca---attggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgc 4563988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 531 - 740
Target Start/End: Complemental strand, 4602256 - 4602050
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| |||||||||| |||||||||||||||||||||||||  |||||||||| ||||||   |||||||||||| |||||||||||||| | ||||    
T  4602256 tttttgtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagtt 4602157  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||| ||||  |||||||||||||    || || ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  4602156 ggtgtccacaagagaaagtgttgaaccacccttc---gatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagt 4602060  T
Q  731 gccgatgttg 740  Q
    ||||||||||    
T  4602059 gccgatgttg 4602050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 529 - 721
Target Start/End: Complemental strand, 4626420 - 4626231
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||||||||| |||||||||||| || ||| |||||||||||||| ||||||||||||| |||||||||||||  | ||    
T  4626420 cctttttgtggatcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaag 4626321  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatg 721  Q
     | ||||| ||||||| ||||||||||||| ||||||   |||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  4626320 ctggtgtccgcaagagaaagtactgaaccatccttca---attggtggattcttaactcattgtggatggaactcaaccattgaaagcatatg 4626231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 539 - 740
Target Start/End: Complemental strand, 4586095 - 4585897
Alignment:
Q  539 gatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagttcgtgtctg 638  Q
    |||||||||  ||||||||||||||||||| ||  | ||||||||||| ||||||  ||||||||||||| |||||||||||||  || ||| ||| | |    
T  4586095 gatcattagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccg 4585996  T
Q  639 caagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagtgccgatgt 738  Q
    |||||||||||| ||||||||||||||   |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||| ||||    
T  4585995 caagagcaagtattgaaccacccttca---attggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgt 4585899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 529 - 721
Target Start/End: Original strand, 4514784 - 4514973
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||| | |||||||||| ||||||||||||||||||||||||| |||||||| || |||||||||||||||||| || |||||||||||||| | ||    
T  4514784 cctttttatggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaag 4514883  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatg 721  Q
    || |||||  |||||| ||||  ||||||||||||||   ||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4514884 ttggtgtccacaagagaaagttttgaaccacccttca---attggcggattcttgactcattgcggatggaactcaaccactgagagcatatg 4514973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 529 - 724
Target Start/End: Complemental strand, 3172210 - 3172018
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| ||| |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||| | ||    
T  3172210 cctttttgtggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaag 3172111  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgc 724  Q
    || ||||| ||||||| ||||  ||||||| ||||||   ||||| |||||||||||||| || ||||||||||||||||| |||||  |||||||    
T  3172110 ttggtgtccgcaagagaaagtgttgaaccatccttca---attggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgc 3172018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 530 - 720
Target Start/End: Complemental strand, 4571440 - 4571253
Alignment:
Q  530 ctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagt 629  Q
    |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||  |  ||    
T  4571440 ctttttgtggatcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggt 4571341  T
Q  630 tcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatat 720  Q
    | |||   ||||||| ||||| ||||||| ||||||   |||||||| ||||||||||| ||||||||||||||||| || ||||||||||    
T  4571340 tggtgctcgcaagagaaagtattgaaccatccttca---attggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatat 4571253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 529 - 740
Target Start/End: Complemental strand, 4470272 - 4470064
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| | |||||||||||||| ||||| || ||||| ||||| ||| |||| |||| ||||||| |||||||||||||   ||     
T  4470272 cctttttgtggatcattaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtgaa 4470173  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccaga 728  Q
     | |||||  |||||||||||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||  ||    
T  4470172 ctggtgtcctcaagagcaagtactgaaccacccttcaatc---ggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctgga 4470076  T
Q  729 gtgccgatgttg 740  Q
    ||||| ||||||    
T  4470075 gtgccaatgttg 4470064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 529 - 724
Target Start/End: Complemental strand, 4574777 - 4574585
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||||||||||||||||||||| || ||||| ||||| || ||| |||| ||||||||| ||||||| |||||| | ||    
T  4574777 cctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaag 4574678  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgc 724  Q
    || |||||  |||||| ||||| ||||||||| ||||    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4574677 ttggtgtccacaagagaaagtattgaaccacctttca---gtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgc 4574585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 530 - 740
Target Start/End: Complemental strand, 4481161 - 4480954
Alignment:
Q  530 ctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagt 629  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||| || |||||||| |||| | |||| ||||||||| |||||||||||||| | |||    
T  4481161 ctttttgtggattattaggtctaatcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagt 4481062  T
Q  630 tcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagag 729  Q
    | |||||  |||||| ||||  ||||||||||||||   || || ||||||||||||||||| |||||||||||||||||||||||  |||||||  |||    
T  4481061 tggtgtccacaagagaaagttttgaaccacccttca---atcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggag 4480965  T
Q  730 tgccgatgttg 740  Q
    |||| ||||||    
T  4480964 tgccaatgttg 4480954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 531 - 740
Target Start/End: Original strand, 4266831 - 4267037
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||| |||||| |||||||||||||||| |||||||||||||||||||| || ||| | || ||||||||| ||||||| |||||| | ||||    
T  4266831 tttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagtt 4266930  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||  ||||  |||||||||||||    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  ||||    
T  4266931 ggtgtccacaagataaagtgttgaaccacccttc---gattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagt 4267027  T
Q  731 gccgatgttg 740  Q
    ||| ||||||    
T  4267028 gccaatgttg 4267037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 529 - 724
Target Start/End: Complemental strand, 4622611 - 4622419
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||| |||||||| || |||||  || |||||||||| ||||||| |||||||||||||  ||||||||||||  |  |    
T  4622611 cctttttgtggatcattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcagg 4622512  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgc 724  Q
    || |||||  |||||| ||||||| ||||||||| |||||   ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  4622511 ttggtgtccacaagaggaagtacttaaccaccctgcaatt---ggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgc 4622419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 531 - 721
Target Start/End: Original strand, 4299486 - 4299673
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| |||||||||| | || ||||||||||| ||||   || |||||||||| ||||||| ||||||||||||| ||||||||||||   | || |    
T  4299486 tttttgtggatcattaggccagaccttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagct 4299585  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatg 721  Q
     |||||  ||||| ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  4299586 agtgtccacaagaacaagtactgaaccacccttcaatt---ggtggattcttgactcactgtggatggaactcaaccattgaaagcatatg 4299673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 531 - 721
Target Start/End: Complemental strand, 4458061 - 4457874
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||| | |||| |||||||||||||||||||||| |||||||||||||| || ||||||||||||| |||  |||||||| ||||| | ||||    
T  4458061 tttttgtggataactaggcctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagtt 4457962  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatg 721  Q
     |||||  |||||  ||||  ||||||||||||||   || || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4457961 ggtgtccacaagataaagtgttgaaccacccttca---atcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatg 4457874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 4585757 - 4585633
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | ||||||||||| |||||||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||| |||||||| ||    
T  4585757 gaaagaagatgaggcaaaaggcaatcgagttgaagaagaaggcggaggaggacacgagacctggaggttgttcatacataaacttggaaaaagtgattaa 4585658  T
Q  118 ggaggttttgcttaaacaaaatcaa 142  Q
    |||||||||||||||| ||||||||    
T  4585657 ggaggttttgcttaaataaaatcaa 4585633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 539 - 724
Target Start/End: Complemental strand, 4560964 - 4560783
Alignment:
Q  539 gatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagttcgtgtctg 638  Q
    |||||||||| |||||||||||||||||||||| || ||||| ||||| || ||| |||| ||||||||| ||||||| |||||| | |||| |||||      
T  4560964 gatcattaggcctgatcttgtcattggtggctcggtggttttctcatctga-tttttgaaagaaatttcagatagaggactaatagcaagttggtgtcca 4560866  T
Q  639 caagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgc 724  Q
    |||||| ||||| |||||||||| |||    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4560865 caagagaaagtattgaaccacccatca---gtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgc 4560783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 529 - 725
Target Start/End: Original strand, 4259817 - 4260010
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||| ||  | |||||||||||  || |||||||||| ||||||| || |||||||||  |||||||||||||  ||||    
T  4259817 cctttttgtggatcattaggcctgacctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcgag 4259916  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgcc 725  Q
     | ||||| |||||||||||||||||||||| |||||    ||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||    
T  4259917 ctggtgtccgcaagagcaagtactgaaccactcttca---gttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgcc 4260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 529 - 721
Target Start/End: Complemental strand, 4506326 - 4506137
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||| |||||||| || |||||||  |||||||||||| ||||| |||| ||| | ||    
T  4506326 cctttttgtggatcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagccttatagcaag 4506227  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatg 721  Q
     | ||||   |||||| ||||  | || |||||||||   ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4506226 ctggtgttcacaagagaaagtgttaaatcacccttca---attggtggattcttgactcattgcggatggaactcaaccactgaaagcatatg 4506137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 531 - 739
Target Start/End: Complemental strand, 4568523 - 4568318
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| |||||||||| || | ||||||||||||||||||||| |||||||||||||||||||||||| || |||  ||||||||| |||| | || |    
T  4568523 tttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatagcaagct 4568424  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     ||||| ||||||||||||  ||||||||||||||    ||||  |||||||||||||||||||||||||||| ||    |||||||| |||||||||||    
T  4568423 ggtgtccgcaagagcaagtgttgaaccacccttca---gttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagt 4568327  T
Q  731 gccgatgtt 739  Q
     || |||||    
T  4568326 accaatgtt 4568318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 529 - 740
Target Start/End: Original strand, 4490018 - 4490226
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||||||||| ||||||||||||   || |||||||| || ||| |||| ||||||||| ||||||| |||||| | ||    
T  4490018 cctttttgtggatcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagaggactaatagcaag 4490117  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccaga 728  Q
    || |||||  |||||| | ||| |||| |||||||||   ||||||||||||||||||||||||||||||||||||| ||  || || ||||||||  ||    
T  4490118 ttggtgtccacaagagaaggtattgaatcacccttca---attggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctgga 4490214  T
Q  729 gtgccgatgttg 740  Q
    ||||| ||||||    
T  4490215 gtgccaatgttg 4490226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 531 - 740
Target Start/End: Complemental strand, 4516788 - 4516582
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||| |||||| |||| ||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||  |||||||| ||||| | || |    
T  4516788 tttttgtggattattaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagct 4516689  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     ||||| ||||||| ||||  ||||||| ||||||    |||| ||||||||||||||||||||||||||||| || |  |||||||| |||||| ||||    
T  4516688 ggtgtccgcaagagaaagtgttgaaccatccttca---gttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagt 4516592  T
Q  731 gccgatgttg 740  Q
     || ||||||    
T  4516591 accaatgttg 4516582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 531 - 740
Target Start/End: Complemental strand, 4617489 - 4617283
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||  |||| ||||| ||||||   ||||||||| || |||||||||||||| | ||||    
T  4617489 tttttgtggatcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagtt 4617390  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||  ||||  ||||||||||||||   || || ||||||||||||||||| |||||||| |||||||||||||| ||||| ||  ||||    
T  4617389 ggtgtccacaagacaaagtgttgaaccacccttca---atcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagt 4617293  T
Q  731 gccgatgttg 740  Q
    ||| ||||||    
T  4617292 gccaatgttg 4617283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 4579552 - 4579414
Alignment:
Q  19 aaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaag 118  Q
    |||||||||| | |||||||||||||||||||||||||| | ||||||| |||||||| ||||||| |||||||||||||||||||| |||||||| |||    
T  4579552 aaagaagatgaggcaaaaggcaattgagttgaagaagaaggtggaggaggacacgagacctggaggctgttcatacatgaacttggagaaagtgattaag 4579453  T
Q  119 gaggttttgcttaaacaaaatc-aatttaagtaactttt 156  Q
    ||||| || || |||||||||| || |||||| ||||||    
T  4579452 gaggtgttactcaaacaaaatcgaacttaagtgactttt 4579414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 4560627 - 4560503
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | |||||||| || ||| ||||||| || ||||||| | |||||||| |||||||||||||||||||||||||||| |||||||| ||    
T  4560627 gaaagaagatgaggcaaaaggccatggagctgaagaaaaaggcggaggtgtacacgagacctggaggttgttcatacatgaacttggagaaagtgattaa 4560528  T
Q  118 ggaggttttgcttaaacaaaatcaa 142  Q
    |||||| ||||||||||||||||||    
T  4560527 ggaggtgttgcttaaacaaaatcaa 4560503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 4613729 - 4613853
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||| ||| | |||||||||||||||||||||||||| || |||||| |||||||| | |||||||||||||| |||||||||||||||||||||||    
T  4613729 gaaagaaaatgaggcaaaaggcaattgagttgaagaagaaggcagaggaggacacgagaccaggaggttgttcatatatgaacttggacaaagtgatcaa 4613828  T
Q  118 ggaggttttgcttaaacaaaatcaa 142  Q
     |||||  |||| ||||||||||||    
T  4613829 tgaggtgctgctgaaacaaaatcaa 4613853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 4557246 - 4557122
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| |  |||||  ||||||| |||||| ||| ||||||||| |||||||| |||| ||||||||||||||||| ||||| |||||||| ||    
T  4557246 gaaagaagatgtggaaaaagataattgagatgaagacgaaggcggaggaggacacgagacctggtggttgttcatacatgaatttggaaaaagtgattaa 4557147  T
Q  118 ggaggttttgcttaaacaaaatcaa 142  Q
    |||||||||||||||||||||||||    
T  4557146 ggaggttttgcttaaacaaaatcaa 4557122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 531 - 740
Target Start/End: Original strand, 4504062 - 4504268
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||| |||||| |||||||||| |||||||||||||  || |||||||| || ||||||||||||| |||  ||||||| ||  || | ||||    
T  4504062 tttttgtggattattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagaggacttgtagcaagtt 4504161  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||  ||||  ||||||||||||||||    || |||||||||||||||||||||||||||||||||||||||||  | |||||  ||||    
T  4504162 ggtgtccacaagataaagtgttgaaccacccttcaatc---ggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagt 4504258  T
Q  731 gccgatgttg 740  Q
    ||| ||||||    
T  4504259 gccaatgttg 4504268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 4480814 - 4480693
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    |||||||||||   |||||||| || |||||||||||||  || |||||| |||| ||| |||| |||||||||||||||||||||||||||||||| ||    
T  4480814 gaaagaagatgaagcaaaaggccatggagttgaagaagatggcagaggaggacacaagacctggtggttgttcatacatgaacttggacaaagtgattaa 4480715  T
Q  118 ggaggttttgcttaaacaaaat 139  Q
    |||||| |||||||||||||||    
T  4480714 ggaggtcttgcttaaacaaaat 4480693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 48 - 141
Target Start/End: Complemental strand, 4571063 - 4570970
Alignment:
Q  48 tgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatca 141  Q
    |||||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||    
T  4571063 tgaagaagaaggcggaggaggacacgagacctggtggttgttcatacatgaacttggaaaaagtgattaaggaggttttgcttaaataaaatca 4570970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 4574429 - 4574305
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | ||||| || |||||| |||||||||| | ||||| | |||||||| ||||||||||||||||||  |||||||| |||||||| ||    
T  4574429 gaaagaagatgaggcaaaaagccattgagctgaagaagaaggtggaggtggacacgagacctggaggttgttcatacacaaacttggagaaagtgattaa 4574330  T
Q  118 ggaggttttgcttaaacaaaatcaa 142  Q
    |||||| ||||||||||||||||||    
T  4574329 ggaggtgttgcttaaacaaaatcaa 4574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 4572277 - 4572206
Alignment:
Q  447 gctctttgtaaatcaatcaggaagaattttctacaacctttccacgaacttcttgctagacttgatgactct 518  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  4572277 gctctttgtaaatcaatcaggaagaattttctacaacctttccgcgaacttcttgctagacttaatgactct 4572206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 626 - 740
Target Start/End: Original strand, 4256371 - 4256482
Alignment:
Q  626 gagttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgcc 725  Q
    ||||| ||||| |||||||||||||||||||||| ||||| ||   |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  4256371 gagttggtgtccgcaagagcaagtactgaaccactcttcagtt---ggtggattcttgactcattgaggatggaactcaaccattgaaagcatttgtgcc 4256467  T
Q  726 agagtgccgatgttg 740  Q
     |||| || ||||||    
T  4256468 ggagttccaatgttg 4256482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 4504408 - 4504523
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | |||||||| || |||||||||||||| || |||||| |||| |||  ||| |||||||||||||||||||||||||||||||| ||    
T  4504408 gaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggaggacacaagacttggtggttgttcatacatgaacttggacaaagtgattaa 4504507  T
Q  118 ggaggttttgcttaaa 133  Q
    ||| || |||||||||    
T  4504508 ggacgtcttgcttaaa 4504523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 4598292 - 4598168
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||| ||| | |||||| ||||||| ||||||| ||| ||||||||| | ||||||  |||||||||||||||||||||||| || |||||||| ||    
T  4598292 gaaagaaaatgaggcaaaagacaattgatttgaagatgaaggcggaggaggaaacgagacttggaggttgttcatacatgaacttagagaaagtgattaa 4598193  T
Q  118 ggaggttttgcttaaacaaaatcaa 142  Q
    |||||| || |||||||| ||||||    
T  4598192 ggaggtgtttcttaaacagaatcaa 4598168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 4617129 - 4617022
Alignment:
Q  32 caaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgctta 131  Q
    |||||||| || |||||||||||||| || ||||||||||| ||| | || ||||||||||||||||||||| ||||||| || ||||| || |||||||    
T  4617129 caaaaggccatggagttgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttgaacaaagttattaaggatgtgttgctta 4617030  T
Q  132 aacaaaat 139  Q
    ||||||||    
T  4617029 aacaaaat 4617022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 3171862 - 3171744
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | |||| ||| || |||||||||||||| || |||||| | || |||  ||| ||||||||||||||||||||||| |||||||| ||    
T  3171862 gaaagaagatgaggcaaagggccatggagttgaagaagaaggcagaggaggatacaagatttggtggttgttcatacatgaacttggataaagtgattaa 3171763  T
Q  118 ggaggttttgcttaaacaa 136  Q
    |||||| ||||||||||||    
T  3171762 ggaggtcttgcttaaacaa 3171744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 4493050 - 4492955
Alignment:
Q  44 gagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 139  Q
    |||||||| ||||| || |||||| ||||   | |||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  4493050 gagttgaaaaagaaggcagaggaggacacagtacctggtggttgttcatacatgaacttggacaaagtgatcaaggatgtcttgcttaaacaaaat 4492955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 4586943 - 4586872
Alignment:
Q  447 gctctttgtaaatcaatcaggaagaattttctacaacctttccacgaacttcttgctagacttgatgactct 518  Q
    |||||||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||| ||||||||    
T  4586943 gctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttcttgctagacttaatgactct 4586872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 197 - 325
Target Start/End: Original strand, 4613888 - 4614017
Alignment:
Q  197 tattgaatttaagttctgatgtaagtgaagtcatcttcagcaagagttcctgaacttaaa-tagtgattcttgctaattttaaatgttttgaatatatgc 295  Q
    ||||||||||||||  |||||||| |||| | |||||||||||||| |  | |||||||| ||  |||||||||| || || |||| |||||||||||||    
T  4613888 tattgaatttaagtgatgatgtaaatgaactgatcttcagcaagagatggtaaacttaaaataacgattcttgcttatcttgaatggtttgaatatatgc 4613987  T
Q  296 atattggataattatatggcatgtatatta 325  Q
    | ||||||||||||||| ||| ||||||||    
T  4613988 acattggataattatatagcaggtatatta 4614017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 610 - 740
Target Start/End: Complemental strand, 4493343 - 4493216
Alignment:
Q  610 atagaggcctaataacgagttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccac 709  Q
    |||||||||||||  | |||| |||||  |||||| || | |||||||||| ||| |||   ||||||||||||||||||||||||||||||||||| ||    
T  4493343 atagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgatt---ggtggattcttgactcattgtggatggaactcaactac 4493247  T
Q  710 tgaaagcatatgtgccagagtgccgatgttg 740  Q
      ||| |||||||||| ||||||| ||||||    
T  4493246 caaaaacatatgtgccggagtgccaatgttg 4493216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 4558436 - 4558365
Alignment:
Q  447 gctctttgtaaatcaatcaggaagaattttctacaacctttccacgaacttcttgctagacttgatgactct 518  Q
    |||||||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||||  ||||||||    
T  4558436 gctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttcttgctagactaaatgactct 4558365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 4563446 - 4563395
Alignment:
Q  322 attatcatgtgaaggatccattttttcaaaaaatcatatgtatactagttta 373  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4563446 attatcatgtgaaggatccattttgtcaaaaaatcatatgtatactagttta 4563395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 278 - 325
Target Start/End: Complemental strand, 4592116 - 4592069
Alignment:
Q  278 aatgttttgaatatatgcatattggataattatatggcatgtatatta 325  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4592116 aatgttttgaatatatgcatattggataattatatggcatgtatatta 4592069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 4516442 - 4516321
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | |||||||| || || ||||||||||| || |||||| |||| ||| | || |||||||||||  |||||||||| |||||||| ||    
T  4516442 gaaagaagatgaggcaaaaggccatggaattgaagaagaaggcagaggaggacacaagaccaggtggttgttcatatgtgaacttggaaaaagtgattaa 4516343  T
Q  118 ggaggttttgcttaaacaaaat 139  Q
    ||||||  |||| |||||||||    
T  4516342 ggaggtgctgctcaaacaaaat 4516321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Original strand, 4267203 - 4267295
Alignment:
Q  44 gagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 136  Q
    |||||||||| ||| || || |||||||| ||| |||| |||| |||||||||||||||||||||||| || ||||||||  |||||||||||    
T  4267203 gagttgaagaggaaggcagaagagaacacaagacctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 4267295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 4490366 - 4490481
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | |||||||| |  |||||||||||||| || | |||| ||||||||   || ||| |||||||||||||||||||||||||||| ||    
T  4490366 gaaagaagatgaggcaaaaggcgacggagttgaagaagaaggcagcggaggacacgagactcggtggtagttcatacatgaacttggacaaagtgattaa 4490465  T
Q  118 ggaggttttgcttaaa 133  Q
    ||| ||  ||||||||    
T  4490466 ggatgtcatgcttaaa 4490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 4515202 - 4515253
Alignment:
Q  88 ttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 139  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  4515202 ttcatacttgaacttggacaaagtgatcaaggaggtgttgcttaaacaaaat 4515253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 4601908 - 4601789
Alignment:
Q  20 aagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaagg 119  Q
    ||||||||| | |||||||| || |||||||||||||  ||  |||||| ||| |||   || ||||||||||||| |||| |||||||||| || ||||    
T  4601908 aagaagatgaggcaaaaggccatggagttgaagaagatggcaaaggagagcactagactaggtggttgttcatacaagaacctggacaaagttattaagg 4601809  T
Q  120 aggttttgcttaaacaaaat 139  Q
    |||| |||||||||||||||    
T  4601808 aggtgttgcttaaacaaaat 4601789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Original strand, 4606967 - 4607026
Alignment:
Q  83 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 142  Q
    |||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||||||    
T  4606967 ggtttttcatacatgaacttggaaaaagtgattaagaaggttttgcttaaacaaaatcaa 4607026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 135
Target Start/End: Original strand, 4392052 - 4392154
Alignment:
Q  33 aaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaa 132  Q
    ||||||| || |||||||||||||| ||  ||||| ||||  || |||| |||| ||||| |||||||||||||||| |||| |||||||| ||||||||    
T  4392052 aaaaggcgatcgagttgaagaagaaggcaaaggaggacacatgacctggtggttcttcattcatgaacttggacaaactgattaaggaggtcttgcttaa 4392151  T
Q  133 aca 135  Q
    |||    
T  4392152 aca 4392154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 4622263 - 4622145
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| |||||||||| || ||||||||| |||| || || ||||  || ||  |||| |||||||||||||  |||||||||||||| || ||    
T  4622263 gaaagaagatgagacaaaaggccatggagttgaaggagaaggcagatgagacgaccagccctggtggttgttcatacaacaacttggacaaagttattaa 4622164  T
Q  118 ggaggttttgcttaaacaa 136  Q
    ||||||  |||||||||||    
T  4622163 ggaggtcatgcttaaacaa 4622145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 4461244 - 4461123
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | |||||||  || || || |||||||| | ||||||| | || ||| ||||||||  |||||||| ||||||||||||||| || ||    
T  4461244 gaaagaagatgaggcaaaaggtcatggaattcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcattaa 4461145  T
Q  118 ggaggttttgcttaaacaaaat 139  Q
    ||| || |||||||||||||||    
T  4461144 ggatgtcttgcttaaacaaaat 4461123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 4505918 - 4505857
Alignment:
Q  78 ctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaat 139  Q
    |||| |||||||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  4505918 ctggtggttgttcattcatgaacttggacaaagttattaaggaggtgttgcttaaacaaaat 4505857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 4626072 - 4625954
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | |||||||| || |||||||||||||| || ||||||||||  ||  | || |||||||||||||||||  |||| ||| |||| ||    
T  4626072 gaaagaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacattagtcccggtggttgttcatacatgaatatggataaactgattaa 4625973  T
Q  118 ggaggttttgcttaaacaa 136  Q
     || || ||||||||||||    
T  4625972 tgatgtcttgcttaaacaa 4625954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 4299816 - 4299869
Alignment:
Q  83 ggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 136  Q
    |||||||| |||||||||||||||||||| || ||||||||| |||||||||||    
T  4299816 ggttgttcgtacatgaacttggacaaagttattaaggaggttctgcttaaacaa 4299869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 447 - 518
Target Start/End: Original strand, 4612541 - 4612612
Alignment:
Q  447 gctctttgtaaatcaatcaggaagaattttctacaacctttccacgaacttcttgctagacttgatgactct 518  Q
    ||||||||| |||||||||| ||||| || ||||||||||| | ||||||| || |||||||| ||||||||    
T  4612541 gctctttgtgaatcaatcagaaagaacttcctacaaccttttcgcgaacttatttctagacttaatgactct 4612612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 4469898 - 4469809
Alignment:
Q  44 gagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaa 133  Q
    ||||| |||||||| | ||||||| | || ||| ||||||||  |||||||| ||||||||||||||| || ||||| || |||||||||    
T  4469898 gagttcaagaagaaggtggaggaggataccagacctggaggtgtttcatacaagaacttggacaaagtcattaaggatgtcttgcttaaa 4469809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 640 - 718
Target Start/End: Original strand, 4391901 - 4391976
Alignment:
Q  640 aagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcat 718  Q
    ||||||||||| |||||||||||| ||||    |||||||||| || ||||||||||| |||||| ||| |||||||||    
T  4391901 aagagcaagtattgaaccacccttgaattt---gtggattcttaacgcattgtggatgaaactcacccattgaaagcat 4391976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 4568143 - 4568072
Alignment:
Q  49 gaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaagga 120  Q
    ||||||||| || ||| || |||| ||| |||| | || ||||||||||||||||||||||||||| |||||    
T  4568143 gaagaagaaggcagagaaggacacaagacctggtgattcttcatacatgaacttggacaaagtgattaagga 4568072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 4581325 - 4581254
Alignment:
Q  447 gctctttgtaaatcaatcaggaagaattttctacaacctttccacgaacttcttgctagacttgatgactct 518  Q
    ||||| ||| |||||||||| ||||| || |||||||||||    |||||||||||||||||| ||||||||    
T  4581325 gctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttcttgctagacttaatgactct 4581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 413 - 446
Target Start/End: Complemental strand, 4591911 - 4591878
Alignment:
Q  413 taggcagaaatacattgcagagattaattgctga 446  Q
    ||||||||||||| ||||||||||||||||||||    
T  4591911 taggcagaaatactttgcagagattaattgctga 4591878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 112; Significance: 3e-56; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 527 - 740
Target Start/End: Original strand, 4347 - 4557
Alignment:
Q  527 atcctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacg 626  Q
    ||||||||||| |||||||||| |||| ||||||||||| |||||  || |||||||||| ||||||| ||||||||||||| |||||||||||||  ||    
T  4347 atcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcg 4446  T
Q  627 agttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgcca 726  Q
    || | |||||  |||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||       
T  4447 agctggtgtccacaagagcaagtactgaaccacccttca---attggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtag 4543  T
Q  727 gagtgccgatgttg 740  Q
    ||||||| ||||||    
T  4544 gagtgccaatgttg 4557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 4701 - 4815
Alignment:
Q  22 gaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggag 121  Q
    ||||||| | |||||||| || |||||||||||||| || ||||||||||| ||  |||| || ||||||||||||||||||||||||||||| ||||||    
T  4701 gaagatgaggcaaaaggccatggagttgaagaagaaggcagaggagaacaccagttctggtggctgttcatacatgaacttggacaaagtgattaaggag 4800  T
Q  122 gttttgcttaaacaa 136  Q
    ||  |||||||||||    
T  4801 gtcatgcttaaacaa 4815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288 (Bit Score: 105; Significance: 5e-52; HSPs: 2)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 531 - 721
Target Start/End: Original strand, 3384 - 3571
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| |||||||||| |||||||||||||||| |||||  || |||||||||| || |||| ||||||||||||| ||||||||||||| || || |    
T  3384 tttttgtggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagct 3483  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatg 721  Q
     |||||  |||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3484 ggtgtccacaagagcaagtactgatccacccttca---attggtggattcttgactcattgtggatggaattcaaccactgaaagcatatg 3571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0288; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 3730 - 3848
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||||||| | ||||||||  | ||||| |||||||| || ||||||||||| ||| | || ||| |||||||||||||| |||||||||| || ||    
T  3730 gaaagaagatgaggcaaaaggccgtggagttaaagaagaaggcagaggagaacactagaccaggtggtcgttcatacatgaacctggacaaagttattaa 3829  T
Q  118 ggaggttttgcttaaacaa 136  Q
    |||||||||||||||||||    
T  3830 ggaggttttgcttaaacaa 3848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 531 - 740
Target Start/End: Complemental strand, 1281581 - 1281375
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||||| |||| |||||||||||||||| ||||||||  |||||||||| || |||| ||||||||||||| |||||||||||||| | ||||    
T  1281581 tttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagtt 1281482  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||| ||||  ||||||||||||||   || |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  1281481 ggtgtccacaagagaaagtgttgaaccacccttca---atcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagt 1281385  T
Q  731 gccgatgttg 740  Q
    ||| ||||||    
T  1281384 gccaatgttg 1281375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 1281235 - 1281114
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    ||||||| ||| || ||||||| || || |||||||||   |||||||||||||| ||| | || |||||||||||||||||||| ||||||||||| ||    
T  1281235 gaaagaatatgagagaaaaggccatggaattgaagaaggcggcggaggagaacactagaccgggtggttgttcatacatgaacttcgacaaagtgattaa 1281136  T
Q  118 ggaggttttgcttaaacaaaat 139  Q
    |||  | |||||||||||||||    
T  1281135 ggaaatgttgcttaaacaaaat 1281114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 3e-44; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 531 - 740
Target Start/End: Complemental strand, 1674693 - 1674487
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||| |||| ||||||||| |||||||||||||| | | ||    
T  1674693 tttttgtggatcactaggcctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaatatcaaatt 1674594  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||| ||||  ||||||||||||||   || || ||||||||||| || || ||||||||||||||||||||||||||||| ||  ||||    
T  1674593 ggtgtccacaagagaaagtgttgaaccacccttca---atcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagt 1674497  T
Q  731 gccgatgttg 740  Q
    ||| ||||||    
T  1674496 gccaatgttg 1674487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 529 - 740
Target Start/End: Original strand, 20863506 - 20863714
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgag 628  Q
    ||||||||| |||||||||| |||||||||||||||||||||| ||  |||| ||||| | ||||||||||||||||||| |||||||||||||  ||||    
T  20863506 cctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgcgtttgtgaatgaaatttcagatagaggcctaatcgcgag 20863605  T
Q  629 ttcgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccaga 728  Q
    || |||||  |||||| | ||  ||||||| ||||||   |||||||||||  | ||||||||||||||||||||||||| ||| |||||||||||  ||    
T  20863606 ttggtgtccacaagagaaggtgttgaaccatccttca---attggtggatttctaactcattgtggatggaactcaaccattgagagcatatgtgctgga 20863702  T
Q  729 gtgccgatgttg 740  Q
    ||||| ||||||    
T  20863703 gtgccaatgttg 20863714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 539 - 720
Target Start/End: Original strand, 16685940 - 16686118
Alignment:
Q  539 gatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagttcgtgtctg 638  Q
    ||||||||||||||||||||||||| | || || || ||||||||||| ||||||  ||||||||| ||| ||||| |||||||  |||| | ||| | |    
T  16685940 gatcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccg 16686039  T
Q  639 caagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatat 720  Q
    |||||||||||| | ||||| ||||||   || ||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  16686040 caagagcaagtattaaaccatccttca---atcggtggattcttaactcattgtggatggaactcaaccactgaaagtatat 16686118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 1674347 - 1674226
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    |||| |||||| | |||||||| || || ||||||||||| || ||||||||||| ||| | || |||||||||||||||||||||||||||||||| ||    
T  1674347 gaaaaaagatgaggcaaaaggccatggaattgaagaagaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaa 1674248  T
Q  118 ggaggttttgcttaaacaaaat 139  Q
    ||| || |||||||||||||||    
T  1674247 ggaagtgttgcttaaacaaaat 1674226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 20863868 - 20863978
Alignment:
Q  32 caaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgctta 131  Q
    |||||| ||| ||||||||||||||| || |||||| |||| ||| | | |||| ||||||| |||||||||||||||||||| |||||||| |||||||    
T  20863868 caaaagacaaatgagttgaagaagaaggcagaggaggacacaagaccggaaggtggttcatatatgaacttggacaaagtgattaaggaggtgttgctta 20863967  T
Q  132 aacaaaatcaa 142  Q
    |||||||||||    
T  20863968 aacaaaatcaa 20863978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 16686332 - 16686402
Alignment:
Q  72 cgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaaaatcaa 142  Q
    ||||| |||| ||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||    
T  16686332 cgagacctggtggttgttcatacatgaacttggaaaaagtgattatggaggttttgcttaaacaaaatcaa 16686402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 447 - 515
Target Start/End: Original strand, 16685104 - 16685172
Alignment:
Q  447 gctctttgtaaatcaatcaggaagaattttctacaacctttccacgaacttcttgctagacttgatgac 515  Q
    |||||||||||||||||||| ||||| || || ||||| || | ||||| ||||||||||||| |||||    
T  16685104 gctctttgtaaatcaatcagaaagaacttcctccaaccctttcgcgaacatcttgctagacttcatgac 16685172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 669 - 707
Target Start/End: Original strand, 1969143 - 1969181
Alignment:
Q  669 attggtggattcttgactcattgtggatggaactcaacc 707  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  1969143 attggtggattcttgactcattgtggctggaattcaacc 1969181  T

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Target: chr5 (Bit Score: 88; Significance: 7e-42; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 531 - 740
Target Start/End: Complemental strand, 24103466 - 24103260
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||| |||||| |||||||||||||||| |||||||||||||||||||| || ||| | || ||| ||||| ||||||| |||||| | ||||    
T  24103466 tttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcagatagaggactaatagcaagtt 24103367  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||  ||||  | ||||||||||| |||   |||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  24103366 ggtgtccacaagataaagtgttaaaccacccttcgatt---ggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagt 24103270  T
Q  731 gccgatgttg 740  Q
    ||| ||||||    
T  24103269 gccaatgttg 24103260  T

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Target: chr5; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 531 - 740
Target Start/End: Original strand, 27999764 - 27999970
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| ||||| |||| || |||||||||||||||||||||| ||||||||||| ||||||  ||| ||||||||| |||||||||||||| | | ||    
T  27999764 tttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatagaggcctaatatcaaatt 27999863  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgccagagt 730  Q
     |||||  |||||| ||||  |||||||||||||||| |   | || ||||||||||| || ||||||||||||||||| ||||||||||| ||  ||||    
T  27999864 ggtgtccacaagagaaagttttgaaccacccttcaatca---gcgggttcttgactcactgcggatggaactcaaccaccgaaagcatatgcgctggagt 27999960  T
Q  731 gccgatgttg 740  Q
    ||| ||||||    
T  27999961 gccaatgttg 27999970  T

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Target: chr5; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 28000110 - 28000231
Alignment:
Q  18 gaaagaagatgcgacaaaaggcaattgagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaa 117  Q
    |||| |||||| | |||||||| || ||||||||||| || || ||||||||||| ||| | || |||||||||||||||||||||||||||||||| ||    
T  28000110 gaaaaaagatgaggcaaaaggccatggagttgaagaaaaaggcagaggagaacactagaccaggtggttgttcatacatgaacttggacaaagtgattaa 28000209  T
Q  118 ggaggttttgcttaaacaaaat 139  Q
    ||| || ||| |||||||||||    
T  28000210 ggaagtgttgtttaaacaaaat 28000231  T

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Target: chr5; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 24103094 - 24103002
Alignment:
Q  44 gagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaacaa 136  Q
    ||||| |||||||| || || |||||||| ||| |||| |||| |||||||||||||||||||||||| || ||||||||  |||||||||||    
T  24103094 gagttcaagaagaaggcagaagagaacacaagatctggtggtttttcatacatgaacttggacaaagttattaaggaggtcatgcttaaacaa 24103002  T

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Target: chr7 (Bit Score: 82; Significance: 3e-38; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 531 - 706
Target Start/End: Complemental strand, 3086887 - 3086715
Alignment:
Q  531 tttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcctaataacgagtt 630  Q
    ||||||| |||||||||| |||||||||||||||| |||||  || || ||||||| ||||||| ||| ||||||||| ||||||| |||||  | || |    
T  3086887 tttttgtggatcattaggcctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagct 3086788  T
Q  631 cgtgtctgcaagagcaagtactgaaccacccttcaattattggtggattcttgactcattgtggatggaactcaac 706  Q
     ||||| ||||||||||||| |||| |||||||||   ||||||||||||||||||||||||||||||||||||||    
T  3086787 ggtgtccgcaagagcaagtattgaatcacccttca---attggtggattcttgactcattgtggatggaactcaac 3086715  T

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Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 3086515 - 3086426
Alignment:
Q  44 gagttgaagaagaaagcggaggagaacacgagagctggaggttgttcatacatgaacttggacaaagtgatcaaggaggttttgcttaaa 133  Q
    ||||| ||||||||||| || |||||||| ||    || ||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  3086515 gagttaaagaagaaagcagaagagaacaccagtatcggtggttgttcatacatgaacttggacaaagttattaaggaggtcttgcttaaa 3086426  T

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Target: scaffold0475 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 670 - 718
Target Start/End: Original strand, 3485 - 3533
Alignment:
Q  670 ttggtggattcttgactcattgtggatggaactcaaccactgaaagcat 718  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  3485 ttggtggattcttaactcattgtggatggaactcaaccattgaaagcat 3533  T

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Target: scaffold0475; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 529 - 618
Target Start/End: Original strand, 3172 - 3261
Alignment:
Q  529 cctttttgtagatcattaggtctgatcttgtcattggtggctcagttgttttgtcatccgagtttgtgaatgaaatttcacatagaggcc 618  Q
    ||||| ||| ||||||||||||||| ||||||||||| || |||  || ||||| ||  ||||||| |||||||| |||| |||||||||    
T  3172 cctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggcc 3261  T

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