View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15856_high_18 (Length: 301)

Name: NF15856_high_18
Description: NF15856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15856_high_18
NF15856_high_18
[»] chr5 (59 HSPs)
chr5 (147-277)||(21150556-21150687)
chr5 (147-277)||(21157697-21157828)
chr5 (145-276)||(25785972-25786104)
chr5 (149-277)||(18392997-18393126)
chr5 (147-279)||(11413554-11413687)
chr5 (147-269)||(18676439-18676562)
chr5 (147-277)||(4609088-4609219)
chr5 (154-262)||(40927232-40927340)
chr5 (147-262)||(8849162-8849279)
chr5 (1-106)||(5402769-5402875)
chr5 (175-263)||(7408409-7408498)
chr5 (153-263)||(3243874-3243985)
chr5 (171-271)||(4985223-4985324)
chr5 (147-263)||(24229026-24229143)
chr5 (172-263)||(4175529-4175621)
chr5 (172-263)||(34261390-34261482)
chr5 (31-106)||(25836936-25837011)
chr5 (174-263)||(25344038-25344128)
chr5 (171-263)||(16124308-16124401)
chr5 (171-271)||(36239528-36239629)
chr5 (147-211)||(4440220-4440284)
chr5 (219-263)||(4688895-4688939)
chr5 (172-263)||(9076149-9076241)
chr5 (219-263)||(12664936-12664980)
chr5 (171-275)||(26906558-26906661)
chr5 (175-263)||(4098409-4098498)
chr5 (149-261)||(13957186-13957299)
chr5 (183-263)||(28463445-28463526)
chr5 (147-263)||(42911628-42911745)
chr5 (219-263)||(1088030-1088074)
chr5 (219-263)||(1297835-1297879)
chr5 (219-263)||(7403930-7403974)
chr5 (219-263)||(8825135-8825179)
chr5 (219-263)||(18794861-18794905)
chr5 (219-263)||(22582550-22582594)
chr5 (219-263)||(37303204-37303248)
chr5 (219-262)||(38502897-38502940)
chr5 (174-251)||(4427457-4427535)
chr5 (183-264)||(13461087-13461169)
chr5 (147-240)||(19831566-19831660)
chr5 (171-264)||(24074886-24074980)
chr5 (150-263)||(28024286-28024400)
chr5 (175-263)||(4017492-4017581)
chr5 (149-241)||(25027601-25027694)
chr5 (183-263)||(38297676-38297757)
chr5 (220-269)||(38702213-38702262)
chr5 (172-244)||(39073141-39073214)
chr5 (171-263)||(40198866-40198959)
chr5 (219-263)||(4694842-4694886)
chr5 (219-271)||(5144095-5144147)
chr5 (172-251)||(6072542-6072622)
chr5 (219-263)||(6754276-6754320)
chr5 (219-263)||(7579765-7579809)
chr5 (172-263)||(12869948-12870040)
chr5 (219-263)||(18020865-18020909)
chr5 (219-263)||(26854192-26854235)
chr5 (219-263)||(32440009-32440053)
chr5 (219-263)||(38017374-38017418)
chr5 (219-263)||(38910352-38910395)
[»] chr7 (48 HSPs)
chr7 (148-277)||(8965931-8966061)
chr7 (147-276)||(26803460-26803590)
chr7 (153-276)||(46563159-46563283)
chr7 (147-276)||(3178013-3178143)
chr7 (147-277)||(48981409-48981540)
chr7 (4-106)||(20884534-20884637)
chr7 (147-216)||(22786024-22786092)
chr7 (157-262)||(30586716-30586822)
chr7 (183-269)||(35684243-35684330)
chr7 (147-244)||(9142294-9142391)
chr7 (175-262)||(46715360-46715448)
chr7 (171-271)||(26724012-26724113)
chr7 (154-262)||(32049510-32049618)
chr7 (171-271)||(33257969-33258070)
chr7 (147-244)||(47408228-47408326)
chr7 (3-104)||(21148386-21148487)
chr7 (147-259)||(28608694-28608807)
chr7 (171-263)||(35112525-35112618)
chr7 (219-263)||(32528431-32528475)
chr7 (171-250)||(33921828-33921908)
chr7 (172-249)||(33099890-33099968)
chr7 (175-263)||(17896581-17896670)
chr7 (199-263)||(31430655-31430720)
chr7 (171-271)||(36298228-36298329)
chr7 (1-94)||(38073660-38073753)
chr7 (172-263)||(7312713-7312805)
chr7 (64-104)||(11667053-11667093)
chr7 (219-263)||(18470403-18470447)
chr7 (219-263)||(20035144-20035188)
chr7 (219-263)||(20045555-20045599)
chr7 (219-263)||(22950921-22950965)
chr7 (219-263)||(26632283-26632327)
chr7 (219-263)||(32966152-32966196)
chr7 (219-263)||(33173903-33173947)
chr7 (7-87)||(38652726-38652806)
chr7 (172-263)||(41889372-41889464)
chr7 (219-263)||(44480245-44480289)
chr7 (147-261)||(9601923-9602038)
chr7 (147-261)||(9829494-9829609)
chr7 (220-263)||(12838182-12838225)
chr7 (168-242)||(33072162-33072237)
chr7 (225-263)||(31399040-31399078)
chr7 (171-263)||(37353924-37354017)
chr7 (219-263)||(3837958-3838002)
chr7 (171-250)||(7477252-7477332)
chr7 (219-263)||(8381922-8381966)
chr7 (219-263)||(29497637-29497681)
chr7 (219-263)||(36922335-36922379)
[»] chr8 (72 HSPs)
chr8 (145-276)||(38074359-38074491)
chr8 (147-277)||(11163348-11163479)
chr8 (147-269)||(8954726-8954849)
chr8 (147-277)||(41890604-41890735)
chr8 (147-262)||(29125999-29126114)
chr8 (147-277)||(9301570-9301701)
chr8 (147-262)||(42352835-42352950)
chr8 (154-262)||(27193088-27193196)
chr8 (6-106)||(30069778-30069878)
chr8 (147-262)||(11727680-11727795)
chr8 (148-263)||(43553135-43553251)
chr8 (147-259)||(2888495-2888608)
chr8 (147-259)||(17074609-17074722)
chr8 (147-259)||(17573548-17573661)
chr8 (171-259)||(18842629-18842718)
chr8 (150-269)||(12248800-12248920)
chr8 (147-270)||(45317741-45317865)
chr8 (149-263)||(23855653-23855768)
chr8 (183-264)||(9687577-9687659)
chr8 (171-263)||(167529-167621)
chr8 (147-259)||(8554043-8554156)
chr8 (147-263)||(32010111-32010228)
chr8 (219-263)||(3513453-3513497)
chr8 (4-104)||(11257852-11257952)
chr8 (219-263)||(23430005-23430049)
chr8 (172-263)||(26062803-26062895)
chr8 (6-94)||(37456102-37456190)
chr8 (147-261)||(13132143-13132258)
chr8 (220-263)||(35052149-35052192)
chr8 (23-104)||(35507031-35507109)
chr8 (34-104)||(1042784-1042854)
chr8 (219-269)||(40603951-40604001)
chr8 (220-269)||(4057378-4057427)
chr8 (147-263)||(14061176-14061293)
chr8 (175-263)||(14263640-14263729)
chr8 (147-263)||(33935087-33935204)
chr8 (172-260)||(43553502-43553591)
chr8 (219-263)||(9808074-9808118)
chr8 (219-263)||(9954745-9954789)
chr8 (219-271)||(11707585-11707637)
chr8 (171-262)||(12342665-12342757)
chr8 (219-263)||(12763530-12763574)
chr8 (219-271)||(15623711-15623763)
chr8 (219-271)||(15647499-15647551)
chr8 (219-263)||(34046947-34046991)
chr8 (219-263)||(36058328-36058372)
chr8 (219-263)||(38482892-38482936)
chr8 (219-263)||(40228391-40228435)
chr8 (171-269)||(1245402-1245501)
chr8 (220-263)||(13327875-13327918)
chr8 (147-269)||(23848583-23848706)
chr8 (220-263)||(27518814-27518857)
chr8 (51-106)||(31410912-31410967)
chr8 (173-263)||(35029643-35029733)
chr8 (220-274)||(10086256-10086310)
chr8 (174-263)||(15281475-15281565)
chr8 (174-263)||(15461844-15461934)
chr8 (199-264)||(15596439-15596505)
chr8 (219-269)||(33314634-33314684)
chr8 (7-104)||(5896076-5896173)
chr8 (219-271)||(8453336-8453386)
chr8 (171-263)||(10180466-10180559)
chr8 (171-251)||(18291571-18291652)
chr8 (171-263)||(21651797-21651890)
chr8 (199-263)||(35296140-35296205)
chr8 (219-263)||(2335529-2335573)
chr8 (219-263)||(13174025-13174069)
chr8 (219-263)||(14228422-14228466)
chr8 (219-263)||(16700993-16701037)
chr8 (219-263)||(25703678-25703721)
chr8 (219-263)||(25812849-25812892)
chr8 (219-263)||(34981925-34981969)
[»] scaffold0006 (1 HSPs)
scaffold0006 (147-277)||(96089-96220)
[»] chr3 (71 HSPs)
chr3 (148-277)||(23771369-23771499)
chr3 (147-277)||(2642792-2642915)
chr3 (145-268)||(7678102-7678224)
chr3 (147-262)||(34750752-34750867)
chr3 (169-252)||(53055338-53055422)
chr3 (6-106)||(13863667-13863766)
chr3 (147-262)||(26748450-26748565)
chr3 (1-104)||(7681620-7681723)
chr3 (1-99)||(28451800-28451898)
chr3 (6-104)||(36923585-36923683)
chr3 (147-251)||(29458236-29458341)
chr3 (147-271)||(40139867-40139992)
chr3 (147-259)||(41425729-41425842)
chr3 (30-101)||(8702079-8702150)
chr3 (30-101)||(9053966-9054037)
chr3 (2-104)||(21490365-21490467)
chr3 (149-261)||(24099-24212)
chr3 (147-251)||(33074311-33074416)
chr3 (219-271)||(27039712-27039764)
chr3 (219-263)||(32980736-32980780)
chr3 (172-263)||(45513673-45513765)
chr3 (21-104)||(28963442-28963525)
chr3 (147-261)||(35077485-35077600)
chr3 (147-261)||(35458537-35458652)
chr3 (172-249)||(27483846-27483924)
chr3 (171-260)||(41351251-41351341)
chr3 (174-263)||(45101418-45101508)
chr3 (171-264)||(54911358-54911452)
chr3 (175-263)||(19550342-19550431)
chr3 (171-263)||(35315228-35315321)
chr3 (147-251)||(36370861-36370966)
chr3 (64-101)||(50524321-50524358)
chr3 (147-263)||(52663538-52663655)
chr3 (199-263)||(55141561-55141626)
chr3 (6-106)||(12568684-12568784)
chr3 (219-263)||(13168113-13168157)
chr3 (6-106)||(13545148-13545248)
chr3 (219-263)||(20105288-20105332)
chr3 (219-263)||(24981386-24981430)
chr3 (219-271)||(27028121-27028173)
chr3 (219-263)||(28885774-28885818)
chr3 (219-263)||(29651764-29651808)
chr3 (219-263)||(41168857-41168901)
chr3 (6-94)||(43310341-43310429)
chr3 (171-262)||(43775447-43775539)
chr3 (219-263)||(47069963-47070007)
chr3 (219-263)||(49123619-49123663)
chr3 (219-263)||(51244720-51244764)
chr3 (219-263)||(54106359-54106403)
chr3 (219-263)||(54898192-54898236)
chr3 (173-251)||(8236954-8237033)
chr3 (175-241)||(44544088-44544155)
chr3 (10-104)||(50360645-50360739)
chr3 (219-252)||(3376410-3376443)
chr3 (199-263)||(5244020-5244085)
chr3 (37-106)||(13433734-13433803)
chr3 (171-263)||(17102850-17102943)
chr3 (163-200)||(29748778-29748815)
chr3 (172-244)||(34266498-34266571)
chr3 (199-263)||(40010749-40010814)
chr3 (199-263)||(42671975-42672040)
chr3 (175-263)||(48152081-48152170)
chr3 (183-251)||(50092053-50092122)
chr3 (219-263)||(7328551-7328595)
chr3 (172-263)||(13158497-13158589)
chr3 (162-261)||(24569648-24569748)
chr3 (219-263)||(27992336-27992380)
chr3 (219-263)||(43945475-43945519)
chr3 (219-263)||(51697670-51697714)
chr3 (219-263)||(52627344-52627387)
chr3 (219-271)||(53282067-53282119)
[»] chr4 (93 HSPs)
chr4 (147-267)||(1180929-1181050)
chr4 (145-277)||(6150779-6150912)
chr4 (147-277)||(1615083-1615212)
chr4 (147-277)||(3802245-3802376)
chr4 (147-252)||(56499640-56499746)
chr4 (147-277)||(1146074-1146208)
chr4 (147-277)||(9746313-9746444)
chr4 (147-277)||(41813728-41813861)
chr4 (165-277)||(43086490-43086601)
chr4 (150-269)||(54029191-54029314)
chr4 (154-271)||(38865994-38866110)
chr4 (147-263)||(27654772-27654889)
chr4 (153-269)||(34925376-34925493)
chr4 (147-277)||(37551694-37551824)
chr4 (169-277)||(20294369-20294480)
chr4 (145-263)||(37502121-37502240)
chr4 (4-114)||(38793719-38793829)
chr4 (149-262)||(39309031-39309144)
chr4 (147-259)||(55430335-55430444)
chr4 (153-262)||(48509904-48510013)
chr4 (147-262)||(51654901-51655016)
chr4 (147-261)||(8456939-8457054)
chr4 (31-106)||(20574935-20575010)
chr4 (172-263)||(38617360-38617452)
chr4 (220-263)||(44014015-44014058)
chr4 (171-268)||(44176641-44176739)
chr4 (147-201)||(53855528-53855582)
chr4 (147-271)||(22828429-22828554)
chr4 (219-263)||(354065-354109)
chr4 (34-106)||(14958399-14958471)
chr4 (147-263)||(26933800-26933916)
chr4 (172-263)||(44217805-44217897)
chr4 (219-271)||(47885089-47885141)
chr4 (1-104)||(22409407-22409510)
chr4 (171-261)||(23719836-23719927)
chr4 (147-261)||(38009794-38009909)
chr4 (150-216)||(46870925-46870991)
chr4 (219-262)||(47251513-47251556)
chr4 (219-269)||(4201419-4201469)
chr4 (6-104)||(10109218-10109316)
chr4 (1-87)||(11873064-11873150)
chr4 (219-261)||(22678410-22678452)
chr4 (6-104)||(30538004-30538102)
chr4 (6-104)||(32318515-32318612)
chr4 (219-269)||(39671418-39671468)
chr4 (172-269)||(50623507-50623604)
chr4 (1-87)||(53039476-53039562)
chr4 (199-263)||(13629273-13629338)
chr4 (147-271)||(42099799-42099924)
chr4 (171-269)||(45725629-45725728)
chr4 (171-271)||(52061649-52061750)
chr4 (175-271)||(55703011-55703108)
chr4 (219-263)||(5374451-5374495)
chr4 (219-263)||(8735488-8735532)
chr4 (219-263)||(8741725-8741769)
chr4 (219-263)||(16464883-16464927)
chr4 (219-263)||(29295453-29295497)
chr4 (219-263)||(35232399-35232443)
chr4 (219-263)||(35381516-35381560)
chr4 (219-263)||(36750276-36750320)
chr4 (219-263)||(39683815-39683859)
chr4 (219-263)||(44069130-44069174)
chr4 (172-263)||(46872020-46872112)
chr4 (219-263)||(47428628-47428672)
chr4 (219-263)||(52677246-52677290)
chr4 (219-271)||(52978327-52978379)
chr4 (147-261)||(1391199-1391314)
chr4 (220-263)||(6195123-6195166)
chr4 (147-261)||(14090341-14090456)
chr4 (147-261)||(14949112-14949227)
chr4 (147-261)||(18091343-18091458)
chr4 (220-263)||(26906491-26906534)
chr4 (147-261)||(34603725-34603840)
chr4 (51-106)||(45850175-45850230)
chr4 (154-262)||(56486485-56486590)
chr4 (147-240)||(26916046-26916140)
chr4 (221-267)||(53855484-53855530)
chr4 (171-263)||(19093205-19093298)
chr4 (183-271)||(36750640-36750729)
chr4 (171-263)||(44549742-44549835)
chr4 (171-216)||(47596665-47596710)
chr4 (183-263)||(52257855-52257936)
chr4 (175-263)||(53599842-53599931)
chr4 (64-104)||(4960432-4960472)
chr4 (219-263)||(6091454-6091498)
chr4 (219-263)||(9834363-9834407)
chr4 (220-264)||(13435263-13435307)
chr4 (219-263)||(16664340-16664384)
chr4 (6-86)||(26533186-26533266)
chr4 (219-263)||(34464376-34464420)
chr4 (219-263)||(48782299-48782342)
chr4 (219-263)||(55147162-55147206)
chr4 (219-263)||(56576205-56576248)
[»] scaffold0003 (1 HSPs)
scaffold0003 (147-277)||(252676-252807)
[»] scaffold0036 (1 HSPs)
scaffold0036 (147-276)||(23219-23349)
[»] chr1 (62 HSPs)
chr1 (147-276)||(11248864-11248994)
chr1 (145-277)||(50152515-50152648)
chr1 (153-262)||(8973482-8973591)
chr1 (6-106)||(298198-298298)
chr1 (154-244)||(10630526-10630616)
chr1 (149-216)||(45230662-45230728)
chr1 (2-115)||(5467164-5467277)
chr1 (169-262)||(2572068-2572162)
chr1 (145-262)||(38569643-38569760)
chr1 (147-259)||(31487803-31487916)
chr1 (147-262)||(41155372-41155487)
chr1 (171-269)||(51974219-51974318)
chr1 (34-106)||(38788923-38788995)
chr1 (219-262)||(51972378-51972421)
chr1 (147-252)||(9127776-9127882)
chr1 (172-264)||(13566774-13566867)
chr1 (147-263)||(32348074-32348191)
chr1 (147-263)||(35700399-35700516)
chr1 (145-260)||(6931212-6931328)
chr1 (219-263)||(19349476-19349520)
chr1 (172-263)||(30686507-30686599)
chr1 (219-263)||(43500602-43500646)
chr1 (1-104)||(8550370-8550473)
chr1 (220-263)||(13507866-13507909)
chr1 (220-263)||(13515054-13515097)
chr1 (145-263)||(39412533-39412652)
chr1 (219-269)||(1677288-1677338)
chr1 (6-104)||(3491490-3491588)
chr1 (30-104)||(5198816-5198890)
chr1 (174-263)||(12124740-12124830)
chr1 (8-106)||(47588464-47588562)
chr1 (171-251)||(13699282-13699363)
chr1 (147-263)||(32994493-32994610)
chr1 (183-263)||(38597687-38597768)
chr1 (153-263)||(52649759-52649870)
chr1 (219-263)||(1024652-1024696)
chr1 (153-262)||(1859192-1859297)
chr1 (6-86)||(2692465-2692545)
chr1 (219-263)||(12231168-12231212)
chr1 (219-263)||(18033923-18033967)
chr1 (219-263)||(20605721-20605765)
chr1 (172-263)||(28679117-28679209)
chr1 (219-263)||(29830849-29830893)
chr1 (219-263)||(37609398-37609442)
chr1 (219-263)||(44818550-44818594)
chr1 (219-263)||(45226674-45226718)
chr1 (219-263)||(45368184-45368228)
chr1 (219-263)||(49497248-49497292)
chr1 (147-249)||(10506921-10507024)
chr1 (147-261)||(52759126-52759241)
chr1 (145-250)||(9362082-9362188)
chr1 (225-263)||(44182856-44182894)
chr1 (147-263)||(19929490-19929607)
chr1 (175-263)||(35255582-35255671)
chr1 (219-263)||(35483878-35483920)
chr1 (219-263)||(1427775-1427819)
chr1 (219-263)||(2059909-2059953)
chr1 (30-94)||(4051686-4051750)
chr1 (219-263)||(8464354-8464398)
chr1 (219-263)||(24781831-24781875)
chr1 (219-263)||(35531392-35531436)
chr1 (172-251)||(50825621-50825701)
[»] chr6 (40 HSPs)
chr6 (147-277)||(19812038-19812169)
chr6 (147-251)||(15432779-15432883)
chr6 (147-259)||(32250980-32251092)
chr6 (147-262)||(11000838-11000953)
chr6 (147-261)||(23777394-23777509)
chr6 (145-263)||(34730656-34730775)
chr6 (170-262)||(2381060-2381153)
chr6 (171-263)||(13597505-13597598)
chr6 (149-263)||(26470753-26470868)
chr6 (145-263)||(34607194-34607313)
chr6 (149-261)||(26485715-26485826)
chr6 (175-263)||(7056196-7056285)
chr6 (171-263)||(9838174-9838267)
chr6 (219-271)||(52751-52803)
chr6 (219-263)||(3621686-3621730)
chr6 (219-262)||(7632540-7632583)
chr6 (7-90)||(17506419-17506502)
chr6 (172-269)||(1751484-1751582)
chr6 (174-263)||(11431212-11431302)
chr6 (157-212)||(31282570-31282626)
chr6 (171-263)||(7235536-7235629)
chr6 (171-251)||(8992656-8992737)
chr6 (171-251)||(9017103-9017184)
chr6 (147-271)||(22050136-22050261)
chr6 (219-263)||(373819-373863)
chr6 (219-263)||(1923948-1923992)
chr6 (219-263)||(24663475-24663519)
chr6 (172-263)||(30237074-30237166)
chr6 (172-249)||(3850430-3850508)
chr6 (172-249)||(17124038-17124116)
chr6 (174-263)||(17193254-17193344)
chr6 (219-269)||(17835983-17836033)
chr6 (6-104)||(31767782-31767880)
chr6 (219-264)||(364643-364688)
chr6 (149-263)||(1249635-1249750)
chr6 (222-263)||(23923817-23923858)
chr6 (219-252)||(31854590-31854623)
chr6 (219-263)||(12732271-12732315)
chr6 (172-263)||(22784721-22784813)
chr6 (219-263)||(30388817-30388861)
[»] scaffold0236 (1 HSPs)
scaffold0236 (153-277)||(14284-14409)
[»] scaffold0002 (3 HSPs)
scaffold0002 (145-276)||(369488-369618)
scaffold0002 (219-263)||(138831-138875)
scaffold0002 (172-263)||(148399-148491)
[»] chr2 (55 HSPs)
chr2 (147-277)||(28967261-28967392)
chr2 (147-276)||(37077253-37077383)
chr2 (147-277)||(38148066-38148196)
chr2 (147-277)||(45065154-45065285)
chr2 (147-252)||(37660844-37660950)
chr2 (151-277)||(30544602-30544726)
chr2 (154-263)||(7529741-7529852)
chr2 (147-262)||(3041660-3041773)
chr2 (149-262)||(928066-928177)
chr2 (175-262)||(25787434-25787522)
chr2 (6-104)||(14776271-14776369)
chr2 (1-106)||(35327828-35327932)
chr2 (147-199)||(29056173-29056225)
chr2 (145-263)||(14541427-14541546)
chr2 (154-263)||(13000948-13001058)
chr2 (171-248)||(36404895-36404973)
chr2 (147-263)||(9706883-9707000)
chr2 (147-261)||(838100-838215)
chr2 (2-104)||(9374023-9374125)
chr2 (168-261)||(33947480-33947574)
chr2 (36-106)||(40534249-40534319)
chr2 (219-264)||(14308488-14308533)
chr2 (219-263)||(4883699-4883743)
chr2 (219-263)||(11222419-11222463)
chr2 (172-263)||(15183056-15183148)
chr2 (172-263)||(15893635-15893727)
chr2 (219-263)||(41885721-41885765)
chr2 (172-263)||(37093546-37093637)
chr2 (219-269)||(10812289-10812339)
chr2 (147-263)||(13754051-13754169)
chr2 (183-263)||(2012957-2013038)
chr2 (175-263)||(19594446-19594535)
chr2 (219-268)||(36375664-36375713)
chr2 (147-271)||(44360521-44360646)
chr2 (219-263)||(479076-479120)
chr2 (219-263)||(10263853-10263897)
chr2 (219-263)||(26342676-26342720)
chr2 (219-263)||(31025043-31025087)
chr2 (3-87)||(32656240-32656324)
chr2 (219-263)||(34399298-34399342)
chr2 (150-269)||(35158384-35158504)
chr2 (219-263)||(38072329-38072373)
chr2 (219-263)||(38186155-38186199)
chr2 (220-263)||(3363680-3363723)
chr2 (147-261)||(37354087-37354202)
chr2 (219-269)||(14288521-14288571)
chr2 (34-104)||(30326110-30326180)
chr2 (34-100)||(33830302-33830368)
chr2 (171-251)||(4654827-4654908)
chr2 (219-263)||(11560150-11560194)
chr2 (219-263)||(15677394-15677438)
chr2 (219-263)||(28145675-28145719)
chr2 (219-263)||(30264705-30264749)
chr2 (219-263)||(32543890-32543934)
chr2 (172-263)||(34357274-34357366)
[»] scaffold0274 (1 HSPs)
scaffold0274 (145-263)||(265-384)
[»] scaffold0154 (1 HSPs)
scaffold0154 (6-104)||(36410-36508)
[»] scaffold0102 (2 HSPs)
scaffold0102 (7-104)||(21233-21330)
scaffold0102 (175-211)||(21121-21157)
[»] scaffold0886 (1 HSPs)
scaffold0886 (149-263)||(4611-4726)
[»] scaffold0007 (1 HSPs)
scaffold0007 (172-263)||(77184-77276)
[»] scaffold0192 (1 HSPs)
scaffold0192 (171-263)||(14773-14866)
[»] scaffold0018 (1 HSPs)
scaffold0018 (183-263)||(184191-184272)
[»] scaffold0464 (1 HSPs)
scaffold0464 (6-94)||(6676-6764)
[»] scaffold0280 (1 HSPs)
scaffold0280 (219-263)||(8250-8294)
[»] scaffold1213 (1 HSPs)
scaffold1213 (171-263)||(19-112)
[»] scaffold0040 (1 HSPs)
scaffold0040 (219-263)||(69196-69240)
[»] scaffold0014 (1 HSPs)
scaffold0014 (219-263)||(195688-195731)


Alignment Details
Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 21150687 - 21150556
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||| |||||||||| |||    
T  21150687 acaaaccaagacaacaaatacattttactacttttgatacaacaattcatcttttttctataaaaaccttcatcatttaatatcttatttcatatactta 21150588  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||| |||||    
T  21150587 tctctctacaataaataatcaagggtaataaa 21150556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 21157828 - 21157697
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||||||| |||||||||| |||    
T  21157828 acaaaccaagacaacaaatacattttactacttttgatacaacaattcatcttttttctataaaaaccttcatcatttaatatcttatttcatatactta 21157729  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||| |||||    
T  21157728 tctctctacaataaataatcaagggtaataaa 21157697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 145 - 276
Target Start/End: Complemental strand, 25786104 - 25785972
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatt 243  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||    
T  25786104 atacaaaccaagacaccaaatgcattttactacttttgatacaacaatttttctttttcttataataaccttcctcatttaatatctcatttcatatatt 25786005  T
Q  244 tatctctctacaataaataatcaagggtgataa 276  Q
    | |||||||||||||||||||||||||| ||||    
T  25786004 tctctctctacaataaataatcaagggtaataa 25785972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 149 - 277
Target Start/End: Original strand, 18392997 - 18393126
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatc 247  Q
    ||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| || || ||    
T  18392997 aaaccaagacaacaaatactttttactacttttgatgcaacaattcatctttttcctataataaccttcatcatttaatatctcatttcatttacttctc 18393096  T
Q  248 tctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||| |||||    
T  18393097 tctctacaataaataatcaagggtaataaa 18393126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 11413554 - 11413687
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||| ||| ||     
T  11413554 acaaaccaagacaacaaatactttttactacttttgatacaacaattcatctttttcctataataaccttcatcatttaatatctaatttcacatacttc 11413653  T
Q  246 tctctctacaataaataatcaagggtgataaatg 279  Q
    |||||||| ||||||||||||| ||| |||||||    
T  11413654 tctctctataataaataatcaaaggtaataaatg 11413687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 18676439 - 18676562
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||  |||||||||| ||     
T  18676439 acaaatcaagacaacaaatactttttactacttttgatacaacaattcatctttttcctataataaccttcatcatttaatatcctatttcatatacttc 18676538  T
Q  246 tctctctacaataaataatcaagg 269  Q
    ||||||||||||||||||||||||    
T  18676539 tctctctacaataaataatcaagg 18676562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 4609219 - 4609088
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| |||||||||||||||||||| || ||     
T  4609219 acaaaccaagacaacacatactttttactacttttgatgcaacaattcatctttttcctgtaataaccttcatcatttaatatctcatttcatttacttc 4609120  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||| ||| |||||    
T  4609119 tctctctacaataaataatcaaaggtaataaa 4609088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 40927340 - 40927232
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctct 252  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||  |||||| |||||||  |||||||    
T  40927340 aagacaacaaatac-ttttactacttttgatgcaacaatttatctttttcctataataatcttaatcatttaatacttcattttatatattgctctctct 40927242  T
Q  253 acaataaata 262  Q
     |||||||||    
T  40927241 gcaataaata 40927232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 8849162 - 8849279
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaata--tctcatttcatatatt 243  Q
    ||||| || |||||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||| | |||||||||  |||||||||||| |||    
T  8849162 acaaatcatgacaacaaatac-ttttactacttttgatacaaaaaattatcttttttctataataaccttaatcatttaatacttctcatttcatacatt 8849260  T
Q  244 tatctctctacaataaata 262  Q
    | ||||||| |||||||||    
T  8849261 tctctctctgcaataaata 8849279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 5402875 - 5402769
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattac-tcaaattgtt 99  Q
    |||| ||||||||||||||  | ||||   ||||||||||||||| ||  |||||||||||| |||||||||| ||||||||||||||| |||| |||||    
T  5402875 taagggaaatgttaacttgtccccttaaggcacatgttaaaaattccattaatagtaattgtgtattggaaattgtgttaatttattacttcaagttgtt 5402776  T
Q  100 taatact 106  Q
    |||||||    
T  5402775 taatact 5402769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 7408498 - 7408409
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| |||||||  |||| |||||||||||||   |||||||||||||||||||||||||| |||||| | |||||||||    
T  7408498 tacttttgatacaataatttatacttttactataataaccttattcatttaatatctcatttcatatatttttctctccataataaataa 7408409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 263
Target Start/End: Complemental strand, 3243985 - 3243874
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    ||||||||  |||| || |||||| |||| |||||| ||||| | |||||||||||||| ||||   ||||||||||||||||| |||||||| ||||||    
T  3243985 caagacaattaataaatgttactattttttatacaataatttttgtttttcctataatagccttattcatttaatatctcattttatatatttttctctc 3243886  T
Q  252 tacaataaataa 263  Q
     |||||||||||    
T  3243885 cacaataaataa 3243874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 4985223 - 4985324
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||| ||| || |||| ||||| ||||||| |||||   |||||||||||| ||||||||||||| ||||||  ||||||||||| ||||    
T  4985223 ttactacttttgatgcaataagttatatttttactataatgaccttattcatttaatatcttatttcatatatttctctctcctcaataaataattaagg 4985322  T
Q  270 gt 271  Q
    ||    
T  4985323 gt 4985324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 24229143 - 24229026
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    |||||||||||||   |||| || |||||||||||||||||||||| ||   |||| |||||||||||||   |||| ||||||| |||||||||||||     
T  24229143 acaaaccaagacattcaataaatgttactacttttgatacaacaatatacacttttactataataaccttattcattcaatatctaatttcatatatttc 24229044  T
Q  246 tctctctacaataaataa 263  Q
    ||||||  ||||||||||    
T  24229043 tctctccgcaataaataa 24229026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 4175529 - 4175621
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||| ||  |||  |||| |||||||||||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  4175529 tactacttttgatacaataagctatacttttactataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 4175621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 34261482 - 34261390
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  34261482 tactacttttgatacaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 34261390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 25836936 - 25837011
Alignment:
Q  31 cacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    |||||||||| |||| ||| |||| ||||| | |||||||||  ||||| ||||||||||||||||||||||||||    
T  25836936 cacatgttaagaattccactaataataattatgtattggaaagtgtgttcatttattactcaaattgtttaatact 25837011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 25344128 - 25344038
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| ||| ||  ||| ||||| |||||||||||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  25344128 ctacttttgatgcaataagctatatttttactataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 25344038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 16124308 - 16124401
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| || || | ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  16124308 ttactacttttgatgcaataagttgtatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 16124401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 36239629 - 36239528
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||| ||| || |||| ||||| ||||||| |||||    ||||||||||| ||||||||||||| ||||||  ||||||||||| ||||    
T  36239629 ttactacttttgatgcaataagttatatttttactataatgaccttattaatttaatatcttatttcatatatttctctctccgcaataaataattaagg 36239530  T
Q  270 gt 271  Q
    ||    
T  36239529 gt 36239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 4440284 - 4440220
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataata 211  Q
    |||||||||||||  ||||  ||||||||||||||||||||| ||||||| |||| |||||||||    
T  4440284 acaaaccaagacactaaatgtattttactacttttgatacaataatttatgttttgcctataata 4440220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 4688895 - 4688939
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  4688895 catttaatatctcatttcatatatttttctctctgcaataaataa 4688939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 9076241 - 9076149
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  9076241 tactacttttgatgcaataaattatacttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 9076149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 12664980 - 12664936
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  12664980 catttaatatctcatttcatatatttctctctccacaataaataa 12664936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 26906661 - 26906558
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca--catttaatatctcatttcatatatttatctctctacaataaataatcaag 268  Q
    |||||||||||||||||| |||||||| |||||| |||||||| | ||  ||||||||||||  |||||||||||  |||||||  |||||||||  |||    
T  26906661 ttactacttttgatacaataatttatccttttccaataataacat-cattcatttaatatcttgtttcatatatt--tctctctgtaataaataactaag 26906565  T
Q  269 ggtgata 275  Q
    |||||||    
T  26906564 ggtgata 26906558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 4098498 - 4098409
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| || ||||   ||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  4098498 tacttttgatacaataagttatacctttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 4098409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 13957186 - 13957299
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatc 247  Q
    |||||||||||  ||||  |||| |||||||||||||||| || |||| |||| ||||||||| |||| |  ||||||||||  |||||||||| |  ||    
T  13957186 aaaccaagacactaaatgtatttcactacttttgatacaataacttatgttttgcctataatatccttgattatttaatatcatatttcatatactcttc 13957285  T
Q  248 tctctacaataaat 261  Q
    ||||| ||||||||    
T  13957286 tctcttcaataaat 13957299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 28463445 - 28463526
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||| |||||||  |||| |||||||||||||   |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  28463445 atacaataatttatacttttactataataaccttagtcatttaatatcttatttcatatatttctctctccgcaataaataa 28463526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 42911745 - 42911628
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  | |||||||||||||| ||| || ||||  |||| ||||||| | | |   ||||||| |||||||||||||||||||    
T  42911745 acaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgatcatattcatttaacatctcatttcatatattta 42911646  T
Q  246 tctctctacaataaataa 263  Q
    ||||||  ||||||||||    
T  42911645 tctctccgcaataaataa 42911628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 1088030 - 1088074
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  1088030 catttaatatctcatttcatatatttctctctccgcaataaataa 1088074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 1297835 - 1297879
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||||||||||   ||||||||||    
T  1297835 catttaatatctcatttcatatatttatctcttcgcaataaataa 1297879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 7403974 - 7403930
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||    
T  7403974 catttaatatctcatttcatatatttatttctccgcaataaataa 7403930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 8825179 - 8825135
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  8825179 catttaatatctcatttcatatatttctctctccgcaataaataa 8825135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 18794905 - 18794861
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||    
T  18794905 catttaatatcttatttcatatatttctctctccacaataaataa 18794861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 22582594 - 22582550
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  22582594 catttaatatctcatttcatatatttttctctccgcaataaataa 22582550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 37303204 - 37303248
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  37303204 catttaatatctcatttcatatatttctctctccgcaataaataa 37303248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 38502897 - 38502940
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    |||||||||||||||||||||||||| ||||||  |||||||||    
T  38502897 catttaatatctcatttcatatatttctctctccgcaataaata 38502940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 251
Target Start/End: Original strand, 4427457 - 4427535
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||||| || ||||  |||| ||||||| ||||  | ||||||| |||||||||||||||||| ||||||    
T  4427457 ctacttttgatacaataagttatacttttactataatgacctcactcatttaacatctcatttcatatatttctctctc 4427535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 13461169 - 13461087
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    |||||| ||||||| |||||  |||||||| |||   |||||||||||| |||| |||||||| |||||| ||||||||||||    
T  13461169 atacaataatttatatttttattataataatctttttcatttaatatcttattttatatatttctctctccacaataaataat 13461087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 240
Target Start/End: Original strand, 19831566 - 19831660
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatat 240  Q
    ||||||||||||||  |||| || ||| || ||||||||||| ||||||| | ||| ||||||| |||||   ||||||||||||||||| ||||    
T  19831566 acaaaccaagacaatcaataaatgttaatatttttgatacaataatttatatgtttactataatgaccttattcatttaatatctcatttaatat 19831660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 24074886 - 24074980
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    |||||||||||||| ||| || ||||  |||| ||||||| | |||   |||||||||||| ||||||||||||| ||||||  |||||||||||    
T  24074886 ttactacttttgatgcaataagttatacttttactataatgaacttattcatttaatatcttatttcatatatttctctctccgcaataaataat 24074980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 263
Target Start/End: Original strand, 28024286 - 28024400
Alignment:
Q  150 aaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatct 248  Q
    |||||||||||  ||||  | |||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||| ||||||||| |||||||| |||    
T  28024286 aaccaagacaatcaataattattactacttttgatgcaataagttatacttttactataatgaccttattcatttaacatctcattttatatatttctct 28024385  T
Q  249 ctctacaataaataa 263  Q
    |||  ||||||||||    
T  28024386 ctccgcaataaataa 28024400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 4017581 - 4017492
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| || ||||  |||| |||||||||||||   ||||||| |||||||||||||||||| ||| ||  ||||||||||    
T  4017581 tacttttgatgcaataagttattcttttactataataaccttattcatttaacatctcatttcatatatttctctttccgcaataaataa 4017492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 25027601 - 25027694
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatata 241  Q
    |||| |||||||  |||| || |||||||||||||||||| |||| ||  |||| |||||||| ||||   |||||||||| ||||||||||||    
T  25027601 aaactaagacaatcaataaatgttactacttttgatacaataattgatacttttactataatatccttattcatttaatatttcatttcatata 25027694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 38297676 - 38297757
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||| |||||||  |||| |||||||  |||| | ||| |||||||| ||||||||||||| |||||| |||||||||||    
T  38297676 atacaataatttatacttttactataatcgccttaatcatgtaatatcttatttcatatatttctctctccacaataaataa 38297757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 38702262 - 38702213
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    ||||||||||| ||||||||||||| ||||||  ||||||||||| ||||    
T  38702262 atttaatatcttatttcatatatttctctctccgcaataaataattaagg 38702213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 39073214 - 39073141
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattt 244  Q
    ||||||||||||| ||| ||  |||  |||| |||||||||||||   ||||||||||||||||||||||||||    
T  39073214 tactacttttgatgcaataagctatacttttactataataaccttattcatttaatatctcatttcatatattt 39073141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 40198959 - 40198866
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||| |||||||||||| ||||| ||||||  ||||||||||    
T  40198959 ttactacttttgatgcaataagttatacttttactataatgaccttattcatttaacatctcatttcatttatttctctctccgcaataaataa 40198866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 4694886 - 4694842
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||| |||||||||||||||||| ||||||  ||||||||||    
T  4694886 catttaacatctcatttcatatatttctctctccgcaataaataa 4694842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 5144095 - 5144147
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||   |||||||||| ||||||    
T  5144095 catttaatatcttatttcatatatttctctctccgtaataaataattaagggt 5144147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 251
Target Start/End: Complemental strand, 6072622 - 6072542
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||||||||||||| |||||||| ||||||    
T  6072622 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatttaatatatttctctctc 6072542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 6754276 - 6754320
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  6754276 catttaatatcttatttcatatatttctctctccgcaataaataa 6754320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 7579765 - 7579809
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||    
T  7579765 catttaatatctcatttcatatatttctctttccgcaataaataa 7579809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 12869948 - 12870040
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||| |||||| |||||||| ||||||  ||||||||||    
T  12869948 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatttcattttatatatttctctctccgcaataaataa 12870040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 18020865 - 18020909
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||| |||||||||||||||||||| ||||||  ||||||||||    
T  18020865 catttgatatctcatttcatatatttctctctccgcaataaataa 18020909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 26854192 - 26854235
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  26854192 catttaatatc-catttcatatatttctctctccacaataaataa 26854235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 32440009 - 32440053
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||| ||||| ||||||| ||||||||||    
T  32440009 catttaatatcttatttcatgtatttctctctctgcaataaataa 32440053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 38017374 - 38017418
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| ||||||  ||||||||||    
T  38017374 catttaatatcacatttcatatatttctctctccgcaataaataa 38017418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 38910395 - 38910352
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| ||||||||||||||||||||| | |||||||||    
T  38910395 catttaatatc-catttcatatatttatctctccataataaataa 38910352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 148 - 277
Target Start/End: Original strand, 8965931 - 8966061
Alignment:
Q  148 caaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttat 246  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| |    
T  8965931 caaaccaagacaacaaatactttttactacttttgatacaacaattcatctttttcctataataaccttcatcatttaatatcttatttcatgtatttct 8966030  T
Q  247 ctctctacaataaataatcaagggtgataaa 277  Q
    ||||||||||||||||||||||||| |||||    
T  8966031 ctctctacaataaataatcaagggtaataaa 8966061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 147 - 276
Target Start/End: Original strand, 26803460 - 26803590
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||     
T  26803460 acaaaccaagacaacaaatactttttactacttttgatacaacaattcatcttttccctataataaccttcatcatttaatatctcattttatatatttc 26803559  T
Q  246 tctctctacaataaataatcaagggtgataa 276  Q
    ||||||||| |||||||||||||||| ||||    
T  26803560 tctctctacgataaataatcaagggtaataa 26803590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 153 - 276
Target Start/End: Original strand, 46563159 - 46563283
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  46563159 caagacaacaaatgcattttactacttttgatataacaatttttctttttcctataataaccttcctcatttaatatctcatttcatatatttctctctc 46563258  T
Q  252 tacaataaataatcaagggtgataa 276  Q
    |||||||||||||||||||| ||||    
T  46563259 tacaataaataatcaagggtaataa 46563283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 3178143 - 3178013
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttc-acatttaatatctcatttcatatattta 245  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| || ||||||||||||     
T  3178143 acaaaccaagacaacaattacattttactacttttgatacaacaatttatcttttttctataataaccttcgtcatttaatatatcttttcatatatttc 3178044  T
Q  246 tctctctacaataaataatcaagggtgataa 276  Q
    ||||||| |||||||||| ||||||| ||||    
T  3178043 tctctctgcaataaataaccaagggtaataa 3178013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 48981409 - 48981540
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||||     
T  48981409 acaaaccaagacaacaattacattttactacttttgatacaacaatttatctttttcctataataaccttcatcatttaatattttttttcatatatttt 48981508  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
      ||||| ||||||||||  |||||| |||||    
T  48981509 catctctgcaataaataactaagggtaataaa 48981540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 20884637 - 20884534
Alignment:
Q  4 gagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaattta-ttactcaaattgtttaa 102  Q
    |||||||||||||||| || |||||  | |||||||| |||| ||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  20884637 gagaaatgttaacttgtgcgcttagggctcatgttaagaattccactaatagtaattgtatattggaaattgtgttaatttatttactcaaattgtttaa 20884538  T
Q  103 tact 106  Q
    ||||    
T  20884537 tact 20884534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 22786092 - 22786024
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt 216  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22786092 acaaaccaaaacaacaaatac-ttttactacttttgatacaacaatttatctttttcctataataacctt 22786024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 157 - 262
Target Start/End: Original strand, 30586716 - 30586822
Alignment:
Q  157 acaacaaatacattttactacttttgatacaacaatttatctttttc-ctataataaccttca-catttaatatctcatttcatatatttatctctctac 254  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||  ||||||||||||| | |||||||||||||||||||||||||| ||||||| |    
T  30586716 acaacaaatac-ttttactatttttgaaacaacaatttatctttttttctataataaccttaatcatttaatatctcatttcatatatttctctctctgc 30586814  T
Q  255 aataaata 262  Q
    | ||||||    
T  30586815 agtaaata 30586822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 269
Target Start/End: Complemental strand, 35684330 - 35684243
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    ||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  35684330 atacaacaattcatctttttcctataataatcttcgtcatttaatatctcatttcatatacttctctctctacaataaataataaagg 35684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 244
Target Start/End: Original strand, 9142294 - 9142391
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattt 244  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||| | |||||||||  |||||| ||||||||    
T  9142294 acaaatcaagacaacaaatac-ttttactacttttgatataacaatttatctttttcctataatatccttaatcatttaatacttcattttatatattt 9142391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 46715360 - 46715448
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    ||||||| |||||||||||||||||||||||||||||||||| |  ||||||||| | ||| ||||||||| ||||||  |||||||||    
T  46715360 tacttttcatacaacaatttatctttttcctataataaccttaataatttaatattttattccatatatttctctctcagcaataaata 46715448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 26724113 - 26724012
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||| ||||||||||||| |||||| |||||||||||| ||||    
T  26724113 ttactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatcttatttcatatatttctctctccacaataaataattaagg 26724014  T
Q  270 gt 271  Q
    ||    
T  26724013 gt 26724012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 32049618 - 32049510
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctct 252  Q
    |||||||||||||  ||||||||||||| | | | |||||||||||||| ||||||||  ||| | |||||||||  ||||||||| |||||||||||||    
T  32049618 aagacaacaaatat-ttttactacttttaacatagcaatttatcttttttctataatattcttaatcatttaatacttcatttcatgtatttatctctct 32049520  T
Q  253 acaataaata 262  Q
     |||||||||    
T  32049519 gcaataaata 32049510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 33258070 - 33257969
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||||||| | || ||  |||| |||||||||||||   ||||||||||||||||| |||||||| |||||| | ||||||||| |||||    
T  33258070 ttactacttttgatacaatacttcatacttttactataataaccttattcatttaatatctcattttatatatttctctctccataataaataaccaagg 33257971  T
Q  270 gt 271  Q
    ||    
T  33257970 gt 33257969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 244
Target Start/End: Complemental strand, 47408326 - 47408228
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattt 244  Q
    |||||||||||||   |||| || |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| |||||||||||||||    
T  47408326 acaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcatttcatatattt 47408228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 21148386 - 21148487
Alignment:
Q  3 agagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaa 102  Q
    ||||||||||||| ||| ||| |||  ||||||||||| |||| ||| ||||  |||| | ||||| |||| || ||||||||||||||||| |||||||    
T  21148386 agagaaatgttaagttgtgcttttaagacacatgttaagaattccactaataaaaattatgtattgaaaattgtattaatttattactcaaaatgtttaa 21148485  T
Q  103 ta 104  Q
    ||    
T  21148486 ta 21148487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 28608807 - 28608694
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||| ||||||||  |||| || || ||||||||||||||| ||||| | ||||| |||||||||||||    ||||||||| ||||| |||||||||     
T  28608807 acaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttactataataaccttatttatttaatatatcattacatatatttc 28608708  T
Q  246 tctctctacaataa 259  Q
    |||||| |||||||    
T  28608707 tctctccacaataa 28608694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 35112618 - 35112525
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||| | || || ||||| |||||||||| ||    |||||||||||||||| |||||||| |||||| |||||||||||    
T  35112618 ttactacttttgatacaatacttcatatttttactataataactttatttatttaatatctcattttatatatttttctctccacaataaataa 35112525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 32528431 - 32528475
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  32528431 catttaatatctcatttcatatatttctctctccacaataaataa 32528475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 33921828 - 33921908
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctct 250  Q
    |||||||||||||| ||| || |||| ||||| ||||||| |||||   |||||||||||||||||||||||||| |||||    
T  33921828 ttactacttttgatgcaataaattatatttttactataatgaccttattcatttaatatctcatttcatatatttctctct 33921908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 33099890 - 33099968
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctc 249  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||||||||||||||||||||||    
T  33099890 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatttcatatatttatctc 33099968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 17896581 - 17896670
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  17896581 tacttttgatgcaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 17896670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 31430720 - 31430655
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||| |||||||||||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  31430720 ttttactataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 31430655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 36298228 - 36298329
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||| ||| || |||| ||||| ||||||| || ||   |||||||||||| ||||||||||||| ||||||   |||||||||| ||||    
T  36298228 ttactacttttgatgcaataagttatatttttactataatgactttattcatttaatatcttatttcatatatttctctctccgaaataaataattaagg 36298327  T
Q  270 gt 271  Q
    ||    
T  36298328 gt 36298329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38073753 - 38073660
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaa 94  Q
    |||| |||||||||||||| || |||||  ||||||||||  ||||| | ||||| |||| | |||| ||||| ||||||||||||| ||||||    
T  38073753 taagggaaatgttaacttgtgcccttagggcacatgttaagcatttctctaatagaaattatgtattagaaattgtgttaatttattgctcaaa 38073660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 7312805 - 7312713
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  7312805 tactacttttgatgcaataagttatacttttactataatgaccttatttatttaatatctcatttcatatatttctctctccgcaataaataa 7312713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 11667053 - 11667093
Alignment:
Q  64 tattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  11667053 tattggaaattgtgttaatttattgctcaaattgtttaata 11667093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 18470447 - 18470403
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  18470447 catttaatatctcatttcatatatttctctctccgcaataaataa 18470403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 20035188 - 20035144
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  20035188 catttaatatctcatttcatatatttctctctccgcaataaataa 20035144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 20045599 - 20045555
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  20045599 catttaatatctcatttcatatatttctctctccgcaataaataa 20045555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 22950921 - 22950965
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    
T  22950921 catttaatatctcatttcatatatttctctctctgtaataaataa 22950965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 26632283 - 26632327
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  26632283 catttaatatctcatttcatatatttctctctccgcaataaataa 26632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 32966152 - 32966196
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    
T  32966152 catttaatatctcatttcatatatttctctctctgtaataaataa 32966196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 33173947 - 33173903
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||| |||||||||||||||||| ||||||| ||||||||||    
T  33173947 catttaaaatctcatttcatatatttctctctctgcaataaataa 33173903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 38652806 - 38652726
Alignment:
Q  7 aaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttatt 87  Q
    ||||||||||||| ||| ||||  |||||||||| |||| ||| ||||| |||| | |||||||||  |||||||||||||    
T  38652806 aaatgttaacttgtgcttttagggcacatgttaagaattccactaatagaaattatgtattggaaagtgtgttaatttatt 38652726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 41889372 - 41889464
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||| |||| ||  |||| ||||||||  |||   |||||||||||||||||||||||||| |||||   ||||||||||    
T  41889372 tactacttttgatacaataattgatacttttactataatagtcttattcatttaatatctcatttcatatatttctctcttcgcaataaataa 41889464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 44480245 - 44480289
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||  |||||||||||    
T  44480245 catttaatatctcatttcatatatttctctcttcacaataaataa 44480289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 9601923 - 9602038
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||||||| || ||||  ||| | ||||||| |||| |  ||||||||||  ||||| |||||||     
T  9601923 acaaaccaagacattaaatgtatttcactacttttgatacaataacttatggtttgcttataatatccttaattatttaatatcatatttcttatatttc 9602022  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  9602023 tctctctgcaataaat 9602038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 9829494 - 9829609
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||||||| || ||||  ||| | ||||||| |||| |  ||||||||||  ||||| |||||||     
T  9829494 acaaaccaagacattaaatgtatttcactacttttgatacaataacttatggtttgcttataatatccttaattatttaatatcatatttcttatatttc 9829593  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  9829594 tctctctgcaataaat 9829609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 12838182 - 12838225
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  12838182 atttaatatctcatttcatatatttctctctccgcaataaataa 12838225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 33072237 - 33072162
Alignment:
Q  168 attttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatat 242  Q
    ||||||||| ||||||||||| ||||||| |||| ||||||||| |||| |  ||||||||||  |||||||||||    
T  33072237 attttactatttttgatacaataatttatgttttgcctataatatccttaattatttaatatcatatttcatatat 33072162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Original strand, 31399040 - 31399078
Alignment:
Q  225 atatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  31399040 atatctcatttcatatatttatctctcctcaataaataa 31399078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 37353924 - 37354017
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||| |||| ||| || |||  ||||| ||||||| |||||   ||||||| || ||||||||||||||| |||||| |||||||||||    
T  37353924 ttactacttctgatgcaataagttacatttttactataatgaccttattcatttaacatttcatttcatatatttctctctccacaataaataa 37354017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 3838002 - 3837958
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||| |||||||||||||||||||||| ||  ||||||||||    
T  3838002 catttaacatctcatttcatatatttatctttccgcaataaataa 3837958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 7477252 - 7477332
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctct 250  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||    ||||||||||||||||||||||||| |||||    
T  7477252 ttactacttttgatgcaataagttatacttttactataatgaccttattaatttaatatctcatttcatatatttctctct 7477332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 8381966 - 8381922
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||| |  ||||||||||    
T  8381966 catttaatatctcatttcatatatttctctccccgcaataaataa 8381922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 29497637 - 29497681
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  29497637 catttaatatcttatttcatatatttctctctccgcaataaataa 29497681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 36922379 - 36922335
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| | ||||  ||||||||||    
T  36922379 catttaatatctcatttcatatatttctttctccgcaataaataa 36922335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 72)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 145 - 276
Target Start/End: Complemental strand, 38074491 - 38074359
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatt 243  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||    
T  38074491 atacaaatcaagacaacaaatatattttactacttttgatacaacaatttttctttttcctataataatcttgctcatttaatatctcatttcatatatt 38074392  T
Q  244 tatctctctacaataaataatcaagggtgataa 276  Q
    ||||||||| |||||||||||||||||| ||||    
T  38074391 tatctctctgcaataaataatcaagggtaataa 38074359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 11163479 - 11163348
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| || ||     
T  11163479 acaaaccaagacaacaaatactttttactacttttgatgcaacaattcatctttttcctataataaccttcatcatttaatatctcatttcatttacttc 11163380  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||| |||||    
T  11163379 tctctctacaataaataatcaagggtaataaa 11163348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 8954726 - 8954849
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||| |||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||||||| |||||||||| |||    
T  8954726 acaaactaagacaacaaatactttttactacttttgataaaacaatttatttttttcctataataatcttcatcatttaatatcttatttcatatactta 8954825  T
Q  246 tctctctacaataaataatcaagg 269  Q
    ||||||||||||||||||||||||    
T  8954826 tctctctacaataaataatcaagg 8954849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 41890735 - 41890604
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||  || ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||||||| |||    
T  41890735 acaaaccaaatcagcaaatactttttactacttttgatacaacaattcatcttttttctataataaccttcatcatttaatatcttatttcatatactta 41890636  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    ||||||||||| ||||||||||| || |||||    
T  41890635 tctctctacaagaaataatcaagtgtaataaa 41890604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 29126114 - 29125999
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||  |||||||||||||||     
T  29126114 acaaaccaagacaacaaatac-ttttactacttttgatacaacaatttatctttttcctatgataaccttaatcatttaatacttcatttcatatatttc 29126016  T
Q  246 tctctctacaataaata 262  Q
    ||||||| |||||||||    
T  29126015 tctctctgcaataaata 29125999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 9301570 - 9301701
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||| | ||||||  |||||||||||||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||     
T  9301570 acaaaccaagatatcaaatattttttactacttttgatgcaacaattcatatttttcctataataaccttcatcatttaatatctcatttcatatatttc 9301669  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||| ||||||| || |||||||||| |||||    
T  9301670 tctccctacaattaaaaatcaagggtaataaa 9301701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 42352950 - 42352835
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||   ||||||||| |||||||||||||||||    
T  42352950 acaaaccaaaacaacaaatac-ttttactacttttgatgcaacaatttatctttttcatataataaccttattcatttaatacctcatttcatatattta 42352852  T
Q  246 tctctctacaataaata 262  Q
    ||  ||| |||||||||    
T  42352851 tcattctgcaataaata 42352835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 27193088 - 27193196
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctct 252  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |  ||||||||  ||||| ||||||||| ||||||     
T  27193088 aagacaacaaatac-ttttactacttttgatacaacaatttatcttttacctataataaccttaataatttaatacttcattccatatatttctctctca 27193186  T
Q  253 acaataaata 262  Q
     |||||||||    
T  27193187 gcaataaata 27193196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 30069878 - 30069778
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatac 105  Q
    |||||||||||||| || ||||   |||||||||| |||| ||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  30069878 gaaatgttaacttgtgcccttaaggcacatgttaagaattccactaatagtaattgtgtattggaaattgtgttaatttattactcaagttgtttaatac 30069779  T
Q  106 t 106  Q
    |    
T  30069778 t 30069778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 11727795 - 11727680
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| ||||||||| ||| |  ||||||||  ||||| |||||||||     
T  11727795 acaaaccaagacaacaaatac-ttctactacttttgatacaaaaatttatcttttttctataataatcttaataatttaatacttcattccatatatttc 11727697  T
Q  246 tctctctacaataaata 262  Q
    ||||||  |||||||||    
T  11727696 tctctcagcaataaata 11727680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 43553251 - 43553135
Alignment:
Q  148 caaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttat 246  Q
    |||||||||||||  |||| || |||||||||||||||||| |||| ||  |||| |||||||| ||||   |||||||||| ||||||||||||||| |    
T  43553251 caaaccaagacaatcaataaatgttactacttttgatacaataattgatacttttactataatatccttattcatttaatatttcatttcatatatttct 43553152  T
Q  247 ctctctacaataaataa 263  Q
    |||||  ||||||||||    
T  43553151 ctctccgcaataaataa 43553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 2888495 - 2888608
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || || ||||||||||||||| ||||| | ||||| || ||||||||||    ||||||||||||||| |||||||||     
T  2888495 acaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactttaataaccttatttatttaatatctcattacatatatttc 2888594  T
Q  246 tctctctacaataa 259  Q
    |||||| |||||||    
T  2888595 tctctccacaataa 2888608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 17074609 - 17074722
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || || ||||||||||| ||| ||||| | ||||| |||||||||||||    ||||||||||||||| |||||||||     
T  17074609 acaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttactataataaccttatttatttaatatctcattacatatatttt 17074708  T
Q  246 tctctctacaataa 259  Q
    |||||| |||||||    
T  17074709 tctctccacaataa 17074722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 17573661 - 17573548
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || || ||||||||||| ||| ||||| | ||||| |||||||||||||    ||||||||||||||| |||||||||     
T  17573661 acaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttactataataaccttatttatttaatatctcattacatatatttt 17573562  T
Q  246 tctctctacaataa 259  Q
    |||||| |||||||    
T  17573561 tctctccacaataa 17573548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 259
Target Start/End: Complemental strand, 18842718 - 18842629
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataa 259  Q
    |||||||||||||||||| ||||| | ||||| |||||||||||||    ||||||||||||||| ||||||||| |||||| |||||||    
T  18842718 ttactacttttgatacaataatttttatttttactataataaccttatttatttaatatctcattacatatatttctctctccacaataa 18842629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 12248800 - 12248920
Alignment:
Q  150 aaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatct 248  Q
    ||||||||||   |||| || |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| |||||| |||||||| | |    
T  12248800 aaccaagacattcaataaatattactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcattttatatatttcttt 12248899  T
Q  249 ctctacaataaataatcaagg 269  Q
    ||| ||||||||||| |||||    
T  12248900 ctccacaataaataagcaagg 12248920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 270
Target Start/End: Complemental strand, 45317865 - 45317741
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||||||| || |||| |||| ||||||||| |||| |  ||||| ||||  |||||||||||||     
T  45317865 acaaaccaagacactaaatgtatttcactacttttgatacaataacttatgttttgcctataatatccttgattatttattatcatatttcatatatttt 45317766  T
Q  246 tctctctacaataaataatcaaggg 270  Q
    ||||||| |||||||| || |||||    
T  45317765 tctctctccaataaattattaaggg 45317741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 23855768 - 23855653
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatatttatc 247  Q
    ||||||| ||||  |||| || |||||||||||||||||| |  | ||  |||| |||||||||||||    |||||||||||||||| |||||||||||    
T  23855768 aaaccaatacaatcaataaatattactacttttgatacaatacgtcatacttttactataataaccttatttatttaatatctcattttatatatttatc 23855669  T
Q  248 tctctacaataaataa 263  Q
    |||| |||||||||||    
T  23855668 tctccacaataaataa 23855653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 9687577 - 9687659
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    |||||| |||||||  |||| |||||||||||||   |||||||||||| ||||||||||||| |||||| ||||||||||||    
T  9687577 atacaataatttatacttttactataataaccttagtcatttaatatcttatttcatatatttctctctccacaataaataat 9687659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 167529 - 167621
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||| | || | | |||| |||||||||||||    |||||||||||||||| ||||||||||||||| |||||||||||    
T  167529 ttactacttttgatacaatacttcaac-ttttactataataaccttattaatttaatatctcattttatatatttatctctccacaataaataa 167621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 8554043 - 8554156
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||| ||||||||  |||| || || ||||||||||||||| ||||| | ||||| |||||||||||||    |||||| |||||||| |||||||||     
T  8554043 acaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttactataataaccttatttatttaacatctcattacatatatttc 8554142  T
Q  246 tctctctacaataa 259  Q
    |||||| |||||||    
T  8554143 tctctccacaataa 8554156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 32010111 - 32010228
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  |  ||||||||||||| ||| |||||||  |||| ||||||| |||||   ||||||| ||||||||||||||||||     
T  32010111 acaaaccaagacaatcaataattgctactacttttgatgcaataatttatacttttactataatgaccttgttcatttaacatctcatttcatatatttc 32010210  T
Q  246 tctctctacaataaataa 263  Q
    ||||||  ||||||||||    
T  32010211 tctctccgcaataaataa 32010228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 3513497 - 3513453
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||||||||||||  |||||||||    
T  3513497 catttaatatctcatttcatatatttatctctctgtaataaataa 3513453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 11257852 - 11257952
Alignment:
Q  4 gagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaat 103  Q
    |||||||||||||||| || |||||  |||||||||| |||| ||| ||||| |||| | ||||  |||| ||||||||||||| || ||| ||||||||    
T  11257852 gagaaatgttaacttgtgcccttagggcacatgttaagaattccactaatagaaattatgtattataaattgtgttaatttattgcttaaaatgtttaat 11257951  T
Q  104 a 104  Q
    |    
T  11257952 a 11257952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 23430049 - 23430005
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  23430049 catttaatatctcatttcatatatttctctctctgcaataaataa 23430005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 26062895 - 26062803
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  26062895 tactacttttgatgcaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 26062803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 37456190 - 37456102
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaa 94  Q
    |||||| ||||||| || |||||  ||| |||||| |||| ||| ||||| |||| | |||||||||| ||||||||||||||||||||    
T  37456190 gaaatgctaacttgtgcccttagggcacgtgttaagaattccactaatagaaattatgtattggaaattgtgttaatttattactcaaa 37456102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 13132143 - 13132258
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||| ||| || |||| |||| ||||||||| |||| |  ||||||||||  ||||| |||||||     
T  13132143 acaaaccaagacactaaatgtatttcactacttttgatgcaataacttatgttttgcctataatatccttaattatttaatatcatatttcctatatttc 13132242  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  13132243 tctctctgcaataaat 13132258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 35052192 - 35052149
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  35052192 atttaatatctcatttcatatatttctctctccacaataaataa 35052149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 35507031 - 35507109
Alignment:
Q  23 tcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||| ||||||||||| ||||  || |||||||||   |||||| |||| ||||||||||||||||||| ||||||||||    
T  35507031 tcttaggacacatgttaagaattctaccaatagtaat---atattgaaaattgtgttaatttattactcaagttgtttaata 35507109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 1042854 - 1042784
Alignment:
Q  34 atgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||||||||| ||||| |||| | ||||| |||| ||||||||||||| || ||| |||||||||    
T  1042854 atgttaaaaatttcactaatagaaattatgtattgaaaattgtgttaatttattgcttaaaatgtttaata 1042784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 40603951 - 40604001
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||| ||||    
T  40603951 catttaatatttcatttcatatatttatctctccgcaataaataattaagg 40604001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 269
Target Start/End: Complemental strand, 4057427 - 4057378
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  4057427 atttaatatctcatttcatatatttctctctccgcaataaataattaagg 4057378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 14061176 - 14061293
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || |||||||||||||||||| |||||||  |||| |||||||| | ||   ||||||||||  ||||| || |||||     
T  14061176 acaaaccaagacaatcaataaatattactacttttgatacaataatttatacttttactataatagctttagtcatttaatattacattttatttatttc 14061275  T
Q  246 tctctctacaataaataa 263  Q
    |||||||  |||||||||    
T  14061276 tctctctgtaataaataa 14061293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 14263729 - 14263640
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  14263729 tacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 14263640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 33935087 - 33935204
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  |  ||||||||||||| ||| ||  |||  |||| ||||||| |||||   ||||||||||||||||||||||||||     
T  33935087 acaaaccaagacaatcaataattgatactacttttgatgcaataagctataattttactataatgaccttattcatttaatatctcatttcatatatttc 33935186  T
Q  246 tctctctacaataaataa 263  Q
    ||||||  ||||||||||    
T  33935187 tctctccgcaataaataa 33935204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 260
Target Start/End: Original strand, 43553502 - 43553591
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaa 260  Q
    ||||||||||||||||||||| || |  |||||||||||| ||||   |||| ||||||| ||||||||||||| ||||||  |||||||    
T  43553502 tactacttttgatacaacaatatacccatttcctataatagccttattcattcaatatctaatttcatatatttttctctccgcaataaa 43553591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 9808074 - 9808118
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  9808074 catttaatatctcatttcatatatttctctctccgcaataaataa 9808118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 9954789 - 9954745
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  9954789 catttaatatctcatttcatatatttctctctccgcaataaataa 9954745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 11707585 - 11707637
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||| ||||||    
T  11707585 catttaatatcttatttcatatatttctctctccgcaataaataattaagggt 11707637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 12342665 - 12342757
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    |||||||||||||| ||| || || |  |||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  |||||||||    
T  12342665 ttactacttttgatgcaataagttgtacttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaata 12342757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 12763574 - 12763530
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  12763574 catttaatatctcatttcatatatttctctctccgcaataaataa 12763530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 15623711 - 15623763
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||| ||||||    
T  15623711 catttaatatcttatttcatatatttctctctccgcaataaataattaagggt 15623763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 15647499 - 15647551
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||| ||||||    
T  15647499 catttaatatcttatttcatatatttctctctccgcaataaataattaagggt 15647551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 34046991 - 34046947
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  34046991 catttaatatctcatttcatatatttctctctccgcaataaataa 34046947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 36058372 - 36058328
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  36058372 catttaatatctcatttcatatatttctctctcagcaataaataa 36058328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 38482892 - 38482936
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  38482892 catttaatatctcatttcatatatttctctctccgcaataaataa 38482936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 40228435 - 40228391
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||    
T  40228435 catttaatatgtcatttcatatatttctctctccacaataaataa 40228391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 1245501 - 1245402
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||  ||||||||||||||||| || ||| |||||||||||| ||||    
T  1245501 ttactacttttgattcaataagttatacttttactataatgaccttattcatttaaattctcatttcatatatttttcactccacaataaataattaagg 1245402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 13327918 - 13327875
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  13327918 atttaatatctcatttcatatatttctctctccgcaataaataa 13327875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 269
Target Start/End: Original strand, 23848583 - 23848706
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  |  ||||||||||||| ||| ||  ||| |||||  |||||| |||||   |||||||||||| |||||||||||||     
T  23848583 acaaaccaagacaatcaataattgatactacttttgatgcaataaactatatttttattataatgaccttattcatttaatatcttatttcatatatttc 23848682  T
Q  246 tctctctacaataaataatcaagg 269  Q
    ||||||  |||||||||| |||||    
T  23848683 tctctccgcaataaataaccaagg 23848706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 27518814 - 27518857
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  27518814 atttaatatctcatttcatatatttctctctccgcaataaataa 27518857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Original strand, 31410912 - 31410967
Alignment:
Q  51 aatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    |||||||||| | |||||||||| |||||||||||||  ||||| |||||||||||    
T  31410912 aatagtaattatttattggaaattgtgttaatttattgttcaaaatgtttaatact 31410967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 263
Target Start/End: Complemental strand, 35029733 - 35029643
Alignment:
Q  173 actacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||| | || ||  |||| |||||||||||||   |||||||||| |||||| |||||||| |||||| |||||||||||    
T  35029733 actacttttgatacaatacttcatacttttactataataaccttattcatttaatatttcattt-atatatttctctctccacaataaataa 35029643  T

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Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 10086256 - 10086310
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataatcaagggtgat 274  Q
    ||||||||| | ||||||||||||| ||||||| ||||||||||| |||| ||||    
T  10086256 atttaatatattatttcatatatttctctctctgcaataaataattaaggatgat 10086310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 15281565 - 15281475
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||| |||||| ||||||| |||||  |||||||  |||   |||| |||||||||||| |||||||| ||| ||||||||||||||    
T  15281565 ctactttttatacaataatttatatttttattataatagtcttagtcattcaatatctcattttatatatttctctttctacaataaataa 15281475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 15461934 - 15461844
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||| |||||| ||||||| |||||  |||||||  |||   |||| |||||||||||| |||||||| ||| ||||||||||||||    
T  15461934 ctactttttatacaataatttatatttttattataatagtcttagtcattcaatatctcattttatatatttctctttctacaataaataa 15461844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 15596505 - 15596439
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    |||| |||||||||||||   |||||||||||| ||||||||||||| ||||||  |||||||||||    
T  15596505 ttttactataataaccttattcatttaatatcttatttcatatatttctctctccgcaataaataat 15596439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 33314684 - 33314634
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||||||||||||||| ||||||   |||||||||| ||||    
T  33314684 catttaatatctcatttcatatatttctctctccgtaataaataattaagg 33314634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 104
Target Start/End: Complemental strand, 5896173 - 5896076
Alignment:
Q  7 aaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    ||||||||||||| || ||||   ||||| ||||||||| ||  ||||| |||| | | ||| |||| ||||||||||||| |||||| |||||||||    
T  5896173 aaatgttaacttgcgcccttaaggcacatattaaaaattccattaatagaaattatttgttgaaaattgtgttaatttattgctcaaaatgtttaata 5896076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 8453336 - 8453386
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||||  |||| ||||||||||||| |||||    
T  8453336 catttaatatcttatttcatatattta--tctccacaataaataatcgagggt 8453386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 10180559 - 10180466
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| || || |  |||| ||||||| |||||   |||||||||||||||||||||||||| | ||||  ||||||||||    
T  10180559 ttactacttttgatgcaataagttgtacttttactataatgaccttattcatttaatatctcatttcatatatttctttctccgcaataaataa 10180466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 18291652 - 18291571
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||| ||||||||||||||| ||||||    
T  18291652 ttactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatttcatttcatatatttctctctc 18291571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 21651797 - 21651890
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| || || |  |||| ||||||| |||||   |||||||||||||||||||||||||| ||| ||  ||||||||||    
T  21651797 ttactacttttgatgcaataacttgtacttttactataatgaccttattcatttaatatctcatttcatatatttctctttccgcaataaataa 21651890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 35296205 - 35296140
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||| |||||||| |||| | |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  35296205 ttttactataatagccttaatcatttaatatcttatttcatatatttctctctccgcaataaataa 35296140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 2335573 - 2335529
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  2335573 catttaatatcttatttcatatatttctctctccgcaataaataa 2335529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 13174069 - 13174025
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  13174069 catttaatatcttatttcatatatttctctctccgcaataaataa 13174025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 14228422 - 14228466
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||    
T  14228422 catttaatatttcatttcatatatttctctctccgcaataaataa 14228466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 16700993 - 16701037
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  16700993 catttaatatcttatttcatatatttctctctccgcaataaataa 16701037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 25703678 - 25703721
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||    
T  25703678 catttaatat-tcatttcatatatttctctctccacaataaataa 25703721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 25812849 - 25812892
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||    
T  25812849 catttaatat-tcatttcatatatttctctctccacaataaataa 25812892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 34981969 - 34981925
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||| ||||| ||||||  ||||||||||    
T  34981969 catttaatatctcatttcatgtatttctctctccgcaataaataa 34981925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 96089 - 96220
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| || ||     
T  96089 acaaaccaagacaacaaatactttttactacttttgatgcaacaattcatctttttcctataataaccttcatcatttaatatctcatttcatttacttc 96188  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||| |||||    
T  96189 tctctctacaataaataatcaagggtaataaa 96220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 148 - 277
Target Start/End: Complemental strand, 23771499 - 23771369
Alignment:
Q  148 caaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttat 246  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||| ||||| |    
T  23771499 caaaccaagacaacatatactttttactacttttgatacaacaatttatcttttttctataataaccttcatcatttaatatcttatttcatgtatttct 23771400  T
Q  247 ctctctacaataaataatcaagggtgataaa 277  Q
    ||||||||||||||||||||||||| |||||    
T  23771399 ctctctacaataaataatcaagggtaataaa 23771369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 2642915 - 2642792
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||||||||||        
T  2642915 acaaaccaagacaacaaatactttttactacttttgatacaacaattcatctttttccaataataaccttcatcatttaatatcttatttcatata---- 2642820  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
        |||||||||||||||||||||| |||||    
T  2642819 ----tctacaataaataatcaagggtaataaa 2642792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 145 - 268
Target Start/End: Complemental strand, 7678224 - 7678102
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||  ||||||    
T  7678224 atacaaaccaagacaacaaatacattttactacttttaatacaacaatttatcttcttcctataataactttcatcatttaatatctcattt--tatatt 7678127  T
Q  244 tatctctctacaataaataatcaag 268  Q
    | | ||| | |||||||||| ||||    
T  7678126 tttttctttgcaataaataaccaag 7678102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 34750867 - 34750752
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |  |||||||   |||||||||||||||     
T  34750867 acaaatcaagacaacaaatac-ttttactacttttgatacaacaaattatctttttcctataataaccttaattatttaatgcttcatttcatatatttc 34750769  T
Q  246 tctctctacaataaata 262  Q
    ||||||| |||||||||    
T  34750768 tctctctgcaataaata 34750752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 53055422 - 53055338
Alignment:
Q  169 ttttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctct 252  Q
    ||||||||||||||||| ||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  53055422 ttttactacttttgataaaacaattcatcttttttctataataacctttatcatttaatatctcatttcatatatttatctctct 53055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 13863766 - 13863667
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatac 105  Q
    |||||||||||||| || |||||  |||||||||| |||| ||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  13863766 gaaatgttaacttgtgc-cttagggcacatgttaagaattccactaatagtaattgtgtattggaaattgtgttaatttattactcaagttgtttaatac 13863668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 26748565 - 26748450
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||||  ||||| |||||||||     
T  26748565 acaaatcaagacaacaaatgc-ttttactacttttgatacaacaatttatcttttttctataataaccttaataatttaatacttcattccatatatttc 26748467  T
Q  246 tctctctacaataaata 262  Q
    ||||||  |||||||||    
T  26748466 tctctcagcaataaata 26748450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 7681723 - 7681620
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttt 100  Q
    |||| ||||| |||||||| ||||||||| || ||||||  ||||  || |||||||||||| |||||||||| |||||||||||||| |||| | ||||    
T  7681723 taagggaaattttaacttgtgctcttagagcatatgttatgaattctactaatagtaattgtgtattggaaattgtgttaatttattattcaagtagttt 7681624  T
Q  101 aata 104  Q
    ||||    
T  7681623 aata 7681620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28451898 - 28451800
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtt 99  Q
    |||| |||||||||||||| || |||||  |||||||||| |||| ||| ||||  |||| |||||||||||| |||||||||||||| ||||| ||||    
T  28451898 taagggaaatgttaacttgtgcccttagggcacatgttaagaattccactaataaaaattatatattggaaattgtgttaatttattattcaaaatgtt 28451800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 36923683 - 36923585
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||| ||| ||||||||  ||||| |||| |||| ||| ||||| |||| | |||||||||| ||||||||||||| |||||| |||||||||    
T  36923683 gaaatgttaatttgtgctcttagggcacatattaagaattccactaatagaaattatgtattggaaattgtgttaatttattgctcaaaatgtttaata 36923585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 29458236 - 29458341
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || || ||||||||||||||| ||||| | ||||| |||||||||||||    ||||||||||||||| |||||||||     
T  29458236 acaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactataataaccttatttatttaatatctcattacatatatttc 29458335  T
Q  246 tctctc 251  Q
    ||||||    
T  29458336 tctctc 29458341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 40139867 - 40139992
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  | |||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||| |||||||||||||     
T  40139867 acaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatcttatttcatatatttc 40139966  T
Q  246 tctctctacaataaataatcaagggt 271  Q
    ||||||  ||||||||||| ||||||    
T  40139967 tctctccgcaataaataattaagggt 40139992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 259
Target Start/End: Complemental strand, 41425842 - 41425729
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || || ||||||||||||||| ||||| | ||||| || ||||||||||    ||||||||||||||| |||||||||     
T  41425842 acaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactttaataaccttatttatttaatatctcattacatatatttc 41425743  T
Q  246 tctctctacaataa 259  Q
    |||||| |||||||    
T  41425742 tctctccacaataa 41425729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 8702150 - 8702079
Alignment:
Q  30 acacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttta 101  Q
    |||||||||||||||| |||| |||||| || | ||||| |||| |||||||||||||||||||||| ||||    
T  8702150 acacatgttaaaaattccacagatagtatttatgtattgaaaattgtgttaatttattactcaaattattta 8702079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 9054037 - 9053966
Alignment:
Q  30 acacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttta 101  Q
    |||||||||||||||| |||| |||||| || | ||||| |||| |||||||||||||||||||||| ||||    
T  9054037 acacatgttaaaaattccacagatagtatttatgtattgaaaattgtgttaatttattactcaaattattta 9053966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 21490365 - 21490467
Alignment:
Q  2 aagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttta 101  Q
    |||| |||| |||||||| |  |||||| |||||||||| |||| ||| ||||  |||| |||||||||||| |||||||||||||  ||||| ||||||    
T  21490365 aagaaaaatattaacttgtgtccttagagcacatgttaagaattccactaatataaattatatattggaaattgtgttaatttattgttcaaaatgttta 21490464  T
Q  102 ata 104  Q
    |||    
T  21490465 ata 21490467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 24099 - 24212
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatc 247  Q
    |||||||||||   |||| || |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| ||||||||||||||| |     
T  24099 aaaccaagacatttaataaatattactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcatttcatatatttctt 24198  T
Q  248 tctctacaataaat 261  Q
    |||| | |||||||    
T  24199 tctccaaaataaat 24212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 33074311 - 33074416
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| ||  | ||||||||||||||| ||||| | ||||| |||||||||||||    ||||||||||||||| |||||||||     
T  33074311 acaaaccaagacaatcaataaatgctgctacttttgatacaataatttttatttttactataataaccttatttatttaatatctcattacatatatttc 33074410  T
Q  246 tctctc 251  Q
    ||||||    
T  33074411 tctctc 33074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 27039712 - 27039764
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||||||||||    
T  27039712 catttaatatcttatttcatatatttctctctccgcaataaataatcaagggt 27039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 32980780 - 32980736
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||    
T  32980780 catttaatatcttatttcatatatttctctctctacaataaataa 32980736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 45513673 - 45513765
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  45513673 tactacttttgatgcaataaactatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 45513765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 28963525 - 28963442
Alignment:
Q  21 gctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||| |||||||||||||||||||| ||||| |||  |  |||||||||   ||||||||||| || |||||||||||||    
T  28963525 gctcttaggacacatgttaaaaatttcactaatagaaatgatgcattggaaattaagttaatttattgcttaaattgtttaata 28963442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 35077600 - 35077485
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||| ||| || |||| |||| ||||||||| |||| |  ||||||||||  ||||| |||||||     
T  35077600 acaaaccaagacactaaatgtatttcactacttttgatgcaataacttatgttttgcctataatatccttaattatttaatatcatatttcctatatttc 35077501  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  35077500 tctctctgcaataaat 35077485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 35458537 - 35458652
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  || |  |||| |||||||||||||||| || |||| |||| ||||||||| |||| |  ||||||||||  |||||||||||||     
T  35458537 acaaaccaagacactaattgtatttcactacttttgatacaataacttatgttttgcctataatatccttaattatttaatatcatatttcatatatttt 35458636  T
Q  246 tctctctacaataaat 261  Q
    |||||||  |||||||    
T  35458637 tctctctctaataaat 35458652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 27483846 - 27483924
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctc 249  Q
    ||||||||||||| ||| || |||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||    
T  27483846 tactacttttgatgcaataagttatatttttactataatgaccttattcatttaatatctcatttcatatatttctctc 27483924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 260
Target Start/End: Original strand, 41351251 - 41351341
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaa 260  Q
    ||||||||||||||| || ||| |||  |||| |||||||||||||   |||||||||| ||||||||||||||| |||||  ||||||||    
T  41351251 ttactacttttgatataataatatatacttttactataataaccttattcatttaatatttcatttcatatatttctctcttcacaataaa 41351341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 45101418 - 45101508
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| ||| ||  |||  |||||||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  45101418 ctacttttgatgcaataagctatacttttcctataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 45101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 264
Target Start/End: Original strand, 54911358 - 54911452
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||| ||||||||||||| || ||| ||||||||||||    
T  54911358 ttactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatcttatttcatatatttctcactccacaataaataat 54911452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 19550431 - 19550342
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  19550431 tacttttgatgcaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 19550342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 35315321 - 35315228
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| || ||||  ||||  |||||| |||||   ||||||| |||||||||||||||||||||||||  ||||||||||    
T  35315321 ttactacttttgatgcaataagttatacttttattataatgaccttgttcatttaacatctcatttcatatatttatctctccgcaataaataa 35315228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 36370861 - 36370966
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || || ||||||||||||||| ||||| | ||||| || ||||||||||    ||||||||||||||  |||||||||     
T  36370861 acaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactttaataaccttatttatttaatatctcataacatatatttt 36370960  T
Q  246 tctctc 251  Q
    ||||||    
T  36370961 tctctc 36370966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 50524358 - 50524321
Alignment:
Q  64 tattggaaatcgtgttaatttattactcaaattgttta 101  Q
    |||||||||| |||||||||||||||||||||||||||    
T  50524358 tattggaaattgtgttaatttattactcaaattgttta 50524321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 52663655 - 52663538
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  |  ||||||||||||| ||| ||  |||  |||| ||||||| |||||   ||||||||||||||||||||||||||     
T  52663655 acaaaccaagacaatcaataattgatactacttttgatgcaataagctatacttttgctataatgaccttattcatttaatatctcatttcatatatttc 52663556  T
Q  246 tctctctacaataaataa 263  Q
    ||||||  ||||||||||    
T  52663555 tctctccgcaataaataa 52663538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 55141561 - 55141626
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||| |||||||||||||   ||||||||||||||||| |||||||||||| || |||||||||||    
T  55141561 ttttactataataaccttattcatttaatatctcattttatatatttatctttcaacaataaataa 55141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 12568784 - 12568684
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatac 105  Q
    |||||||||||||| || |||||  |||||||||| |||||||  ||||  |||| | ||||| |||| || |||||||||| |||||| | ||||||||    
T  12568784 gaaatgttaacttgtgcccttagggcacatgttaagaatttcattaataaaaattatttattgtaaattgtcttaatttattgctcaaaatatttaatac 12568685  T
Q  106 t 106  Q
    |    
T  12568684 t 12568684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 13168157 - 13168113
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    
T  13168157 catttaatatctcatttcatatatttctctctctgtaataaataa 13168113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 106
Target Start/End: Complemental strand, 13545248 - 13545148
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatac 105  Q
    |||||||||||||| || |||||  |||||||||| |||||||  ||||  |||| | ||||| |||| || |||||||||| |||||| | ||||||||    
T  13545248 gaaatgttaacttgtgcccttagggcacatgttaagaatttcattaataaaaattatttattgtaaattgtcttaatttattgctcaaaatatttaatac 13545149  T
Q  106 t 106  Q
    |    
T  13545148 t 13545148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 20105332 - 20105288
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  20105332 catttaatatcccatttcatatatttctctctccacaataaataa 20105288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 24981430 - 24981386
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||    
T  24981430 catttaatatatcatttcatatatttctctctctgcaataaataa 24981386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 27028121 - 27028173
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||  |||||||||| |||||||    
T  27028121 catttaatatcttatttcatatatttctctctccgcaataaataaccaagggt 27028173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 28885818 - 28885774
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  28885818 catttaatatctcatttcatatatttctctctccgcaataaataa 28885774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 29651808 - 29651764
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  29651808 catttaatatctcatttcatatatttctctctccgcaataaataa 29651764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 41168901 - 41168857
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  41168901 catttaatatctcatttcatatatttctctctccgcaataaataa 41168857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 43310341 - 43310429
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaa 94  Q
    |||||| ||||||| ||  ||||| |||||||||| ||||  || ||||| |||| | |||||||||| ||||||||||||| ||||||    
T  43310341 gaaatgctaacttgtgcctttagagcacatgttaagaattctactaatagaaattttgtattggaaattgtgttaatttattgctcaaa 43310429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 262
Target Start/End: Original strand, 43775447 - 43775539
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    |||||||||||||| ||| || || |  |||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  |||||||||    
T  43775447 ttactacttttgatgcaataagttgtacttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaata 43775539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 47069963 - 47070007
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  47069963 catttaatatctcatttcatatatttctctctccgcaataaataa 47070007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 49123663 - 49123619
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  49123663 catttaatatctcatttcatatatttctctctccgcaataaataa 49123619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 51244764 - 51244720
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  51244764 catttaatatctcatttcatatatttctctctccgcaataaataa 51244720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 54106403 - 54106359
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||    
T  54106403 catttaatatctcatttcatatatttctctctatgcaataaataa 54106359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 54898192 - 54898236
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  54898192 catttaatatctcatttcatatatttctctctccgcaataaataa 54898236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 251
Target Start/End: Original strand, 8236954 - 8237033
Alignment:
Q  173 actacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    |||||||||| || || |||||||  |||| |||||||||||||   |||||||||||| ||||||||||||| ||||||    
T  8236954 actacttttgttataataatttatacttttactataataaccttgttcatttaatatctaatttcatatatttttctctc 8237033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 44544088 - 44544155
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatata 241  Q
    |||||||||||||| || ||||  |||| |||||||||||||   |||||||||||||||||||||||    
T  44544088 tacttttgatacaataagttatacttttactataataacctttttcatttaatatctcatttcatata 44544155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 104
Target Start/End: Original strand, 50360645 - 50360739
Alignment:
Q  10 tgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||| || |||||  ||||| |||| ||||  || ||||  |||| ||||||| |||| ||||||||||||| |||||| |||||||||    
T  50360645 tgttaacttgtgcccttagggcacatattaagaattctactaatataaattatatattgaaaatggtgttaatttattgctcaaaatgtttaata 50360739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 3376410 - 3376443
Alignment:
Q  219 catttaatatctcatttcatatatttatctctct 252  Q
    |||||||||||||||||||||||||| |||||||    
T  3376410 catttaatatctcatttcatatatttttctctct 3376443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 5244020 - 5244085
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||| |||||||||||||   |||||||||||| ||| ||||||||| ||||||| ||||||||||    
T  5244020 ttttactataataaccttagtcatttaatatcttattccatatatttctctctctgcaataaataa 5244085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 106
Target Start/End: Complemental strand, 13433803 - 13433734
Alignment:
Q  37 ttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    |||| |||| ||| |||| ||||| | ||||| ||||  ||| |||||||||||||||||||||||||||    
T  13433803 ttaagaattccactaataataattttgtattgaaaattatgtgaatttattactcaaattgtttaatact 13433734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 17102943 - 17102850
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| |||||||  ||||  |||||| |||||   ||||||| |||||||||||||||||| ||| ||  ||||||||||    
T  17102943 ttactacttttgatgcaataatttatacttttattataatgaccttattcatttaacatctcatttcatatatttctctttccgcaataaataa 17102850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 29748778 - 29748815
Alignment:
Q  163 aatacattttactacttttgatacaacaatttatcttt 200  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  29748778 aatatattttactacttttgataaaacaatttatcttt 29748815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 34266498 - 34266571
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattt 244  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||||||||||||||||||||||    
T  34266498 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatttcatatattt 34266571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 40010749 - 40010814
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||| |||||||||||||   |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  40010749 ttttactataataaccttagtcatttaatatcttatttcatatatttctctctccgcaataaataa 40010814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 42671975 - 42672040
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||| |||||||||||||   |||||||||||| ||||||||||||| ||| ||| ||||||||||    
T  42671975 ttttactataataaccttattcatttaatatcttatttcatatatttctctttctgcaataaataa 42672040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 48152170 - 48152081
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| | || ||  |||| |||||||||||||   ||||| ||||||||||| |||||||| ||| || |||||||||||    
T  48152170 tacttttgatacaatacttcatacttttactataataaccttattcatttgatatctcattttatatatttctctttcaacaataaataa 48152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 251
Target Start/End: Complemental strand, 50092122 - 50092053
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    |||||| |||||||  |||| |||||||||||||   |||||||||||| ||||||||||||| ||||||    
T  50092122 atacaataatttatacttttactataataaccttagtcatttaatatcttatttcatatatttctctctc 50092053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 7328595 - 7328551
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||| |||||||||||||||||| ||||||  ||||||||||    
T  7328595 catttaacatctcatttcatatatttctctctccgcaataaataa 7328551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 13158497 - 13158589
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| || || ||||  |||| ||||||| |||||   |||||||||| ||||||| ||||||| ||||||  ||||||||||    
T  13158497 tactacttttgatataataagttatacttttactataatgaccttattcatttaatatatcatttcttatatttctctctccgcaataaataa 13158589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 24569748 - 24569648
Alignment:
Q  162 aaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatatttatctctctacaataaa 260  Q
    ||||| |||| | |||||||||||||| || |||| |||| |||||||||  ||| |  ||||||||||  ||||||||||||| | ||||| |||||||    
T  24569748 aaatatatttcattacttttgatacaataagttatgttttgcctataatattcttaattatttaatatcatatttcatatatttttgtctctgcaataaa 24569649  T
Q  261 t 261  Q
    |    
T  24569648 t 24569648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 27992380 - 27992336
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||    
T  27992380 catttaatatttcatttcatatatttctctctcggcaataaataa 27992336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 43945519 - 43945475
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||   ||||||||||    
T  43945519 catttaatatctcatttcatatatttctctcttcgcaataaataa 43945475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 51697670 - 51697714
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||| |  ||||||||||    
T  51697670 catttaatatctcatttcatatatttctctccccgcaataaataa 51697714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 52627344 - 52627387
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  52627344 catttaatatc-catttcatatatttctctctccacaataaataa 52627387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 53282119 - 53282067
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||   |||||||||| ||||||    
T  53282119 catttaatatcttatttcatatatttctctctccgtaataaataattaagggt 53282067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 7e-46; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 147 - 267
Target Start/End: Original strand, 1180929 - 1181050
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacc-ttcacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||     
T  1180929 acaaaccaagacaacaaatgcattttactacttttgatacaacaatttttctttttcctataataacctttctcatttaatatctcatttcatatatttc 1181028  T
Q  246 tctctctacaataaataatcaa 267  Q
    ||||||| ||||||||||||||    
T  1181029 tctctctgcaataaataatcaa 1181050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 145 - 277
Target Start/End: Complemental strand, 6150912 - 6150779
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    |||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||| || |    
T  6150912 atacaaactaagacaacaaatactttttactacttttgatgcaacaattcatctttttcctataataaccttcatcatttaatatctcacttcatttact 6150813  T
Q  244 tatctctctacaataaataatcaagggtgataaa 277  Q
    | |||||||||||||||||||||||||| |||||    
T  6150812 tctctctctacaataaataatcaagggtaataaa 6150779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 1615083 - 1615212
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| |||||||||||||||| ||||| || || ||||||||||||||||||||| |||||||||||||||||||||||||      
T  1615083 acaaaccaagacaacaaatactttttactacttttgatgcaacagttcatatttttcctataataaccttcatcatttaatatctcatttcatatatt-- 1615180  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||| ||| |||||    
T  1615181 tctctctacaataaataatcaatggtaataaa 1615212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 3802376 - 3802245
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| ||||| ||||||||||||| ||||  ||||||||| |||||||||||||| |||||||||| | |||||||||| ||     
T  3802376 acaaaccaagacaacaaatactttttattacttttgatacatcaatccatctttttcgtataataaccttcatcatttaatattttatttcatatacttc 3802277  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||| |||||    
T  3802276 tctctctacaataaataatcaagggtaataaa 3802245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 147 - 252
Target Start/End: Original strand, 56499640 - 56499746
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | | ||||||||||||||||||||||||||     
T  56499640 acaaaccaagacaacaaatacattttactatttttgatacaacaatttatctttttcctataatagccctaatcatttaatatctcatttcatatatttt 56499739  T
Q  246 tctctct 252  Q
    |||||||    
T  56499740 tctctct 56499746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 1146074 - 1146208
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataa---ccttca-catttaatatctcatttcatatat 242  Q
    ||||||||||| || |||||| |||||||||||||||| |||||||| || ||||| |||||||||   |||||| ||||||||||||||||||||||||    
T  1146074 acaaaccaagataataaatactttttactacttttgatgcaacaattcatattttttctataataattaccttcatcatttaatatctcatttcatatat 1146173  T
Q  243 ttatctctctacaataaataatcaagggtgataaa 277  Q
    || |||||||||||||||||||||||||| |||||    
T  1146174 ttctctctctacaataaataatcaagggtaataaa 1146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 9746444 - 9746313
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| ||||| ||| |||||| |||||||| |||||||||||||||||| ||||| |||||||||||||| ||||| || ||     
T  9746444 acaaaccaagacaacaaatactttttattacctttgatgcaacaattcatctttttcctataataatcttcatcatttaatatctcagttcatttacttc 9746345  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    | |||||||||||||||||||||||| |||||    
T  9746344 tttctctacaataaataatcaagggtaataaa 9746313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 41813861 - 41813728
Alignment:
Q  147 acaaaccaagacaacaaatacatttta--ctacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    |||||||||| ||| |||||| |||||  |||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| | |||||||| | |    
T  41813861 acaaaccaaggcaaaaaatactttttatactacttttgatataacaattcatctttttcctataataaccttcatcatttaatatattatttcatacact 41813762  T
Q  244 tatctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||||| |||||    
T  41813761 tatctctctacaataaataatcaagggtaataaa 41813728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 43086601 - 43086490
Alignment:
Q  165 tacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||  ||||||| || |||||||    
T  43086601 tacattttattacttttgatacaacaatttatctttttcctataataaccttcatcatttaatatttcttttcatatatt--tctctctgcagtaaataa 43086504  T
Q  264 tcaagggtgataaa 277  Q
    |||||||| |||||    
T  43086503 tcaagggtaataaa 43086490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 269
Target Start/End: Complemental strand, 54029314 - 54029191
Alignment:
Q  150 aaccaagacaacaaatacattt---tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||||||  |||   || || |||||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||||||||| |||    
T  54029314 aaccaagacaacaaatattttttagtattatttttgatataacaattcatctttttcctataataaccttcatcatttaatatcttatttcatataatta 54029215  T
Q  246 tctctctacaataaataatcaagg 269  Q
    ||||||||||||||||||||||||    
T  54029214 tctctctacaataaataatcaagg 54029191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 271
Target Start/End: Complemental strand, 38866110 - 38865994
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctct 252  Q
    |||||||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||||| ||||||||| |||||||    
T  38866110 aagacaacaaata--ttttactacttttgatgcaacaatttatcttttttctataataaccttaatcatttaatatctcattacatatatttctctctct 38866013  T
Q  253 acaataaataatcaagggt 271  Q
    |||| |||||  |||||||    
T  38866012 acaacaaatatccaagggt 38865994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 27654772 - 27654889
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||||||| |||| |||||||| | |||| |||||||||| ||||||||||||||||    
T  27654772 acaaactaagacaactaataaattttactacttttgatacaacaatttatcatttttctataatagctttcatcatttaatatttcatttcatatattta 27654871  T
Q  246 tctctctacaataaataa 263  Q
    ||  ||| ||||||||||    
T  27654872 tcaatctgcaataaataa 27654889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 34925376 - 34925493
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||| ||||||| || ||||||||||||||||| ||||||| ||||||||| ||| |  ||||||||||||||||||||||||| ||| ||    
T  34925376 caagacaacaaatgcattttattatttttgatacaacaatttttcttttttctataataatcttcctaatttaatatctcatttcatatatttctctttc 34925475  T
Q  252 tacaataaataatcaagg 269  Q
    | ||||||||||||||||    
T  34925476 tgcaataaataatcaagg 34925493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 37551694 - 37551824
Alignment:
Q  147 acaaaccaagacaacaaatacattttactactttt-gatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattt 244  Q
    ||||||||||||||||| |||||||||| | |||| ||| |||||| ||||||||||||||||||  |||||| |||||||||| ||||||||||| |||    
T  37551694 acaaaccaagacaacaattacattttaccattttttgattcaacaacttatctttttcctataat--ccttcatcatttaatatttcatttcatatgttt 37551791  T
Q  245 atctctctacaataaataatcaagggtgataaa 277  Q
     ||||||| |||||||||| ||||||| |||||    
T  37551792 ctctctctgcaataaataaccaagggtaataaa 37551824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 277
Target Start/End: Complemental strand, 20294480 - 20294369
Alignment:
Q  169 ttttactacttttgatacaacaatttatctttttcctataataaccttca-cat--ttaatatctcatttcatatatttatctctctacaataaataatc 265  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||||| |||  ||||||||||||||||||||||| ||| |||| |||||||||||    
T  20294480 ttttactacttttgatacaacaattcgtcttattcctataataaccttcatcattattaatatctcatttcatatatttctctttctagaataaataatc 20294381  T
Q  266 aagggtgataaa 277  Q
    | |||| |||||    
T  20294380 acgggtaataaa 20294369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 37502240 - 37502121
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatt 243  Q
    ||||||||||||||||  |||| || |||||||||||||||||| |||||||  |||| |||||||||||||   ||||||||||  |||||||||||||    
T  37502240 atacaaaccaagacaatcaataaatgttactacttttgatacaataatttatacttttactataataaccttattcatttaatattacatttcatatatt 37502141  T
Q  244 tatctctctacaataaataa 263  Q
    |||||||| | |||||||||    
T  37502140 tatctctccataataaataa 37502121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 38793719 - 38793829
Alignment:
Q  4 gagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaat 103  Q
    |||||||||||||||| || ||||| || |||||||| |||| ||| |||||||||||| ||||| |||| ||||||||||||| || || |||||||||    
T  38793719 gagaaatgttaacttgtgcccttaggactcatgttaagaattccactaatagtaattgtgtattgtaaattgtgttaatttattgcttaagttgtttaat 38793818  T
Q  104 actccatccgt 114  Q
    ||||| |||||    
T  38793819 actccttccgt 38793829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 39309144 - 39309031
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatc 247  Q
    |||| |||| ||||||||| |||||| |||||| ||| || ||||||||||||||||||||||||||| |  ||||||||  ||||||||||||||| ||    
T  39309144 aaactaagataacaaatac-ttttaccacttttaatataataatttatctttttcctataataaccttaataatttaatacttcatttcatatatttctc 39309046  T
Q  248 tctctacaataaata 262  Q
    ||||| |||||||||    
T  39309045 tctctgcaataaata 39309031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 55430335 - 55430444
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||| ||||||||| |||    | ||||||||||||||||||||||||||||||||||||||  | |||||||||  | ||||||||||||||    
T  55430335 acaaaccaagataacaaatactttt----atttttgatacaacaatttatctttttcctataataacctcaatcatttaatacttaatttcatatattta 55430430  T
Q  246 tctctctacaataa 259  Q
    |||||  |||||||    
T  55430431 tctcttcacaataa 55430444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 48509904 - 48510013
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||||  |||||||||||||||||||| |||||||| |||| ||||||||  ||| | |||||||||  ||||||||||||||| |||||     
T  48509904 caagacaacaaatat-ttttactacttttgatacaaaaatttatcatttttctataatattcttaatcatttaatacttcatttcatatatttctctcta 48510002  T
Q  252 tacaataaata 262  Q
    | |||||||||    
T  48510003 tgcaataaata 48510013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 51654901 - 51655016
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||| | || |||||| |||| ||||||||||||||||||||||||||||| || |||||||||| |  ||||||||  ||||| |||||||||     
T  51654901 acaaaccaaaataataaatacttttt-ctacttttgatacaacaatttatctttttactgtaataaccttaataatttaatagttcattccatatatttc 51654999  T
Q  246 tctctctacaataaata 262  Q
    ||||||  |||||||||    
T  51655000 tctctcagcaataaata 51655016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 8456939 - 8457054
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||||||| || |||| |||| ||||||||| |||| |  ||||||||||  |||||||||||||     
T  8456939 acaaaccaagacactaaatgtatttcactacttttgatacaataacttatgttttgcctataatatccttaattatttaatatcatatttcatatatttc 8457038  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  8457039 tctctctgcaataaat 8457054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 20575010 - 20574935
Alignment:
Q  31 cacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    |||||||||| |||| ||  |||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  20575010 cacatgttaagaattccattaataataattgtgtattggaaattgtgttaatttattactcaagttgtttaatact 20574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 38617360 - 38617452
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||||||||||  ||||||||||    
T  38617360 tactacttttgatgcaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttatctctccgcaataaataa 38617452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 44014015 - 44014058
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  44014015 atttaatatctcatttcatatatttatctctccacaataaataa 44014058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 268
Target Start/End: Original strand, 44176641 - 44176739
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaag 268  Q
    |||||||||||||||||| ||| |||  ||||  ||||||||| ||   |||||||||| ||||||||||||||| |||||| ||||||||||| ||||    
T  44176641 ttactacttttgatacaataatatatacttttattataataactttattcatttaatatttcatttcatatatttctctctccacaataaataagcaag 44176739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 53855582 - 53855528
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttt 201  Q
    ||||| |||||||||||||| ||||||| | ||||||||||||||||||||||||    
T  53855582 acaaatcaagacaacaaatatattttacaatttttgatacaacaatttatctttt 53855528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 271
Target Start/End: Original strand, 22828429 - 22828554
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||| ||||  |  ||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||| | |||||||||||||     
T  22828429 acaaaccaagacaaccaataattgctactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatattatttcatatatttc 22828528  T
Q  246 tctctctacaataaataatcaagggt 271  Q
    ||| ||| ||||||||||| ||||||    
T  22828529 tctatctgcaataaataattaagggt 22828554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 354109 - 354065
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  354109 catttaatatctcatttcatatatttatctctccgcaataaataa 354065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 14958471 - 14958399
Alignment:
Q  34 atgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    ||||||| |||||||| |||||||||  | ||||| |||| |||| |||||||||||||| ||||||||||||    
T  14958471 atgttaagaatttcactaatagtaatcatgtattgaaaattgtgtgaatttattactcaacttgtttaatact 14958399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 26933800 - 26933916
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcacatttaatatctcatttcatatatttat 246  Q
    ||||||||| ||||  |||| || ||||||||||||| |||| |||| ||  |||| |||||||| ||||    |||||||| ||||||||||||||| |    
T  26933800 acaaaccaaaacaatcaataaatgttactacttttgacacaataattgatacttttactataatatccttattctttaatatttcatttcatatatttct 26933899  T
Q  247 ctctctacaataaataa 263  Q
    |||||| | ||||||||    
T  26933900 ctctctgcgataaataa 26933916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 44217897 - 44217805
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| ||  |||  |||| ||||||| ||||||  |||||||||||||||||||||||||| ||||||  ||||||||||    
T  44217897 tactacttttgatgcaataagatatacttttactataatgaccttcttcatttaatatctcatttcatatatttctctctccgcaataaataa 44217805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 47885089 - 47885141
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||    
T  47885089 catttaatatcttatttcatatatttctctctctccaataaataattaagggt 47885141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 22409510 - 22409407
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttt 100  Q
    |||| |||||||||||||| || |||||  |||||||||| ||||  || ||||| |||  | |||||||||| ||||||||||||| || ||| |||||    
T  22409510 taagggaaatgttaacttgtgcccttagggcacatgttaagaattctactaatagaaatcatgtattggaaattgtgttaatttattgcttaaaatgttt 22409411  T
Q  101 aata 104  Q
    ||||    
T  22409410 aata 22409407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 261
Target Start/End: Original strand, 23719836 - 23719927
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaat 261  Q
    |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| || |||||||||||| | |||| |||||||||    
T  23719836 ttactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcttttcatatatttctttctccacaataaat 23719927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 38009794 - 38009909
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||||||| || |||| |||| ||||||||| | || |  ||||||||||  |||||||||| ||     
T  38009794 acaaaccaagacactaaatgtatttcactacttttgatacaataacttatgttttgcctataatatcattgattatttaatatcatatttcatatacttt 38009893  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  38009894 tctctctccaataaat 38009909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 46870991 - 46870925
Alignment:
Q  150 aaccaagacaacaaatacattttactactttt-gatacaacaatttatctttttcctataataacctt 216  Q
    |||||||| || |||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  46870991 aaccaagataataaatac-tttgactactttttgatacaacaatttatctttttcttataataacctt 46870925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 47251556 - 47251513
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    |||||||||||||||||||||||||||||||||  |||||||||    
T  47251556 catttaatatctcatttcatatatttatctctccgcaataaata 47251513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 4201419 - 4201469
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||| ||||||||||||||||||||||  ||||||||||| ||||    
T  4201419 catttaatatttcatttcatatatttatctctccgcaataaataattaagg 4201469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 10109218 - 10109316
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||||||| |  |||||  ||||| |||| |||| ||| ||||| |||| | ||||| |||| ||||||||||||| |||||| |||||||||    
T  10109218 gaaatgttaacttgtgtccttagggcacatattaagaattccactaatagaaattatgtattgaaaattgtgttaatttattgctcaaaatgtttaata 10109316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 11873064 - 11873150
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttatt 87  Q
    |||||||||| |||||||| || ||||  |||||||||||||||| |||  ||||  ||| |||||| ||||| |||||||||||||    
T  11873064 taagagaaatattaacttgtgcccttaagacacatgttaaaaattccactgatagagattatatattagaaattgtgttaatttatt 11873150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 22678410 - 22678452
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaat 261  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  22678410 catttaatatctcatttcatatatttatctctccgcaataaat 22678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 30538102 - 30538004
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||| |||  | ||||||| ||||||||| |||| ||  ||||| |||| | ||||| |||| ||||||||||||| |||||| |||||||||    
T  30538102 gaaatgttaatttgtacccttagaatacatgttaagaattccattaatagaaattatgtattgaaaattgtgttaatttattgctcaaaatgtttaata 30538004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 32318515 - 32318612
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||||||| || |||||  |||||||||| |||||||  ||||| |||| | ||||| |||| |||||||||||||  ||||| |||||||||    
T  32318515 gaaatgttaacttgtgcccttagc-cacatgttaagaatttcattaatagaaattatgtattgaaaattgtgttaatttattgttcaaaatgtttaata 32318612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 39671468 - 39671418
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||| ||||    
T  39671468 catttaatatctcatttcatatatttctttctctgcaataaataattaagg 39671418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 269
Target Start/End: Complemental strand, 50623604 - 50623507
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    ||||||||||||||||| ||  |||  |||| ||||||| |||||   |||||| ||||||||||||||||||||||||||  ||||||||||| ||||    
T  50623604 tactacttttgatacaataagctatacttttactataatgaccttattcattta-tatctcatttcatatatttatctctccgcaataaataattaagg 50623507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 53039562 - 53039476
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttatt 87  Q
    ||||||||||||||||||| |||||||    ||||||||| |||||||| ||||| |||| | |||||  ||| |||||||||||||    
T  53039562 taagagaaatgttaacttgtgctcttaaggtacatgttaagaatttcactaatagaaattatgtattgataattgtgttaatttatt 53039476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Original strand, 13629273 - 13629338
Alignment:
Q  199 ttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||| |||||||||||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  13629273 ttttactataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 13629338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 271
Target Start/End: Complemental strand, 42099924 - 42099799
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  | |||||||||||||| ||| || ||||  |||| || |||| |||||   |||||||||||| |||||||||||||     
T  42099924 acaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactgtaatgaccttattcatttaatatcttatttcatatatttc 42099825  T
Q  246 tctctctacaataaataatcaagggt 271  Q
    ||| ||  ||||||||||| ||||||    
T  42099824 tctttccgcaataaataattaagggt 42099799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 269
Target Start/End: Complemental strand, 45725728 - 45725629
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca--catttaatatctcatttcatatatttatctctctacaataaataatcaag 268  Q
    |||||||||||||||||| || ||||| |||||| ||||||||| |||  ||||||||||||  |||||  ||||| |||||||  |||||||||| |||    
T  45725728 ttactacttttgatacaataaattatcattttccaataataacc-tcattcatttaatatcttgtttcaattatttctctctctgtaataaataattaag 45725630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 52061750 - 52061649
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||| ||| || ||||  |||| ||||||| || ||   |||||||||||| ||||||||||||| ||||||  ||||||||||| ||||    
T  52061750 ttactacttttgatgcaataagttatacttttactataatgactttattcatttaatatcttatttcatatatttttctctccgcaataaataattaagg 52061651  T
Q  270 gt 271  Q
    ||    
T  52061650 gt 52061649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 55703108 - 55703011
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||| ||| || |||| ||||| ||||||  |||||   |||||| ||||| ||||||||||||| ||||||| ||||||||||| ||||||    
T  55703108 tacttttgatgcaataagttatatttttactataacgaccttattcatttattatcttatttcatatatttctctctctgcaataaataattaagggt 55703011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 5374451 - 5374495
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  5374451 catttaatatctcatttcatatatttctctctccgcaataaataa 5374495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 8735532 - 8735488
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  8735532 catttaatatctcatttcatatatttttctctccgcaataaataa 8735488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 8741725 - 8741769
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||||  ||||| |||||||||||    
T  8741725 catttaatatctcatttcatatatttcactctccacaataaataa 8741769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 16464883 - 16464927
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||| || |||||||    
T  16464883 catttaatatctcatttcatatatttctctctctgcactaaataa 16464927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 29295497 - 29295453
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  29295497 catttaatatctcatttcatatatttctctctccgcaataaataa 29295453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 35232399 - 35232443
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  35232399 catttaatatctcatttcatatatttctctctccgcaataaataa 35232443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 35381516 - 35381560
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  35381516 catttaatatctcatttcatatatttctctctccgcaataaataa 35381560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 36750320 - 36750276
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||    
T  36750320 catttaatatttcatttcatatatttgtctctccacaataaataa 36750276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 39683815 - 39683859
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    
T  39683815 catttaatatctcatttcatatatttctctctctgtaataaataa 39683859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 44069174 - 44069130
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  44069174 catttaatatctcatttcatatatttctctctccgcaataaataa 44069130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 46872112 - 46872020
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||| ||||||||||||||| ||||||  ||||||||||    
T  46872112 tactacttttgatgcaataagttattcttttactataatgaccttattcatttaatatttcatttcatatatttctctctccgcaataaataa 46872020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 47428672 - 47428628
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||    
T  47428672 catttaatatctcatttcatatatttatttctccgcaataaataa 47428628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 52677246 - 52677290
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  52677246 catttaatatctcatttcatatatttctctctccgcaataaataa 52677290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 52978327 - 52978379
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    ||||||||||||| |||||||||||| |||||  |||||||||||| ||||||    
T  52978327 catttaatatctcttttcatatatttctctctacacaataaataataaagggt 52978379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 1391199 - 1391314
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||| |  ||||  |||| |||||||||||||||| || |||| |||| | ||||||| |||| |  ||||||||||   ||||| ||||||     
T  1391199 acaaaccaagatactaaatgtatttcactacttttgatacaataacttatgttttacgtataatatccttaattatttaatatcatttttcacatatttc 1391298  T
Q  246 tctctctacaataaat 261  Q
    ||||||||||||||||    
T  1391299 tctctctacaataaat 1391314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 6195166 - 6195123
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||| |||||||||||||||||||||||||  ||||||||||    
T  6195166 atttaacatctcatttcatatatttatctctccgcaataaataa 6195123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 14090456 - 14090341
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatattta 245  Q
    |||||| ||||||  ||||  |||| ||||| |||||||||| || || | |||| ||||||||| |||| |  ||||||||||  |||||||||||||     
T  14090456 acaaactaagacactaaatgtatttcactacatttgatacaataacttgtgttttgcctataatatccttaattatttaatatcatatttcatatatttc 14090357  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  14090356 tctctctgcaataaat 14090341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 14949112 - 14949227
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||| |||  ||||  |||| |||||||||||||||| || ||||  ||| ||||||||| |||| |  ||||||||||  ||||| |||||||     
T  14949112 acaaaccaatacactaaatgtatttcactacttttgatacaataacttatggtttgcctataatatccttaattatttaatatcatatttcttatatttc 14949211  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  14949212 tctctctgcaataaat 14949227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 18091458 - 18091343
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| |||||||||||| ||| || |||| ||||   ||||||| |||| |  ||||||||||  |||||||||||||     
T  18091458 acaaaccaagacactaaatgtatttcactacttttgatgcaataacttatgttttaattataatatccttaattatttaatatcatatttcatatatttc 18091359  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  18091358 tctctctgcaataaat 18091343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 26906491 - 26906534
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  26906491 atttaatatctcatttcatatatttctctctccgcaataaataa 26906534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 34603840 - 34603725
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatattta 245  Q
    ||||| |||||||  ||||  |||| ||||| |||||||||| || || | |||| ||||||||| |||| |  ||||||||||  |||||||||||||     
T  34603840 acaaatcaagacactaaatgtatttcactacatttgatacaataacttgtgttttgcctataatatccttaattatttaatatcatatttcatatatttc 34603741  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  34603740 tctctctgcaataaat 34603725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 106
Target Start/End: Complemental strand, 45850230 - 45850175
Alignment:
Q  51 aatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    |||||||||||| ||||| || |  |||||||||||||||||| ||||||||||||    
T  45850230 aatagtaattgtgtattgaaatttatgttaatttattactcaagttgtttaatact 45850175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 56486590 - 56486485
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctct 252  Q
    |||||||||||||| ||||||||||||| ||||||   ||||  ||||| ||| ||||||||| | |||||||||| |||||| |||||||| | | | |    
T  56486590 aagacaacaaatac-ttttactactttttatacaa---tttagatttttactacaataaccttaatcatttaatatttcattttatatatttctttattt 56486495  T
Q  253 acaataaata 262  Q
    ||||||||||    
T  56486494 acaataaata 56486485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 26916140 - 26916046
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatat 240  Q
    |||||||||||||  ||||| |||| |||||||||||||||| || |||| ||||  |||||||| |||| |  ||||||||||  |||||||||    
T  26916140 acaaaccaagacactaaatatatttcactacttttgatacaataacttatgttttgtctataatatccttaattatttaatatcatatttcatat 26916046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 53855530 - 53855484
Alignment:
Q  221 tttaatatctcatttcatatatttatctctctacaataaataatcaa 267  Q
    ||||||| |||||| ||||||||| || |||||||||||||||||||    
T  53855530 tttaataactcattgcatatatttttcgctctacaataaataatcaa 53855484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 19093205 - 19093298
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| || || |  |||| ||||||| |||||   |||||||||||||||||||||||||  ||||||  ||||||||||    
T  19093205 ttactacttttgatgcaataagttgtacttttactataatgaccttattcatttaatatctcatttcatatattcctctctccgcaataaataa 19093298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 36750729 - 36750640
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||| ||||||| ||| | |||||||| |||| | |||||||||| | |||| |||||||| ||||||  ||||||||||| ||||||    
T  36750729 atacaataatttatatttgtactataatagccttaatcatttaatatattattttatatatttctctctccgcaataaataattaagggt 36750640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 44549835 - 44549742
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||| || ||||  ||||  |||||| |||||   ||||||| |||||||||||||||||| |||||   ||||||||||    
T  44549835 ttactacttttgatacaataagttatacttttattataatgaccttattcatttaacatctcatttcatatatttctctcttcgcaataaataa 44549742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 47596665 - 47596710
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataacctt 216  Q
    |||||||||||||||||| || ||||| |||||| |||||||||||    
T  47596665 ttactacttttgatacaataaattatccttttccaataataacctt 47596710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 52257855 - 52257936
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||| |||||||  |||| |||||||| ||||   |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  52257855 atacaataatttatacttttactataatagccttagtcatttaatatcttatttcatatatttttctctccgcaataaataa 52257936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 53599842 - 53599931
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| || ||||  |||| ||||||| |||||   ||||||||||| |||||||||||||| ||||||  ||||||||||    
T  53599842 tacttttgatgcaataagttatacttttactataatgaccttattcatttaatatcacatttcatatatttctctctccgcaataaataa 53599931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 4960472 - 4960432
Alignment:
Q  64 tattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    ||||| |||| ||||||||||||| ||||||||||||||||    
T  4960472 tattgaaaattgtgttaatttattgctcaaattgtttaata 4960432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 6091454 - 6091498
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| |||||  |||||||||||    
T  6091454 catttaatatcttatttcatatatttctctctgcacaataaataa 6091498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 9834407 - 9834363
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||| |||||||| ||||||  ||||||||||    
T  9834407 catttaatatctcatttaatatatttctctctccgcaataaataa 9834363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 13435263 - 13435307
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    ||||||||||||||||||||||||| | |||||  ||||||||||    
T  13435263 atttaatatctcatttcatatatttctttctctgtaataaataat 13435307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 16664384 - 16664340
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  16664384 catttaatatcttatttcatatatttctctctccgcaataaataa 16664340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 26533266 - 26533186
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttat 86  Q
    |||||||||||||| || ||||   |||||||||| |||| ||| ||||| |||| | ||| |||||| ||||||||||||    
T  26533266 gaaatgttaacttgtgcccttatggcacatgttaagaattccactaatagaaattatgtatcggaaattgtgttaatttat 26533186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 34464420 - 34464376
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| | |||||||||||||||||||  |||||||||||    
T  34464420 catttaatattttatttcatatatttatctcttcacaataaataa 34464376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 48782342 - 48782299
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||    
T  48782342 catttaatatct-atttcatatatttctctctccacaataaataa 48782299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 55147162 - 55147206
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||| |||||||||||||||||| ||||||  ||||||||||    
T  55147162 catttaacatctcatttcatatatttctctctccgcaataaataa 55147206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 56576205 - 56576248
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  56576205 catttaatatc-catttcatatatttttctctccacaataaataa 56576248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 252807 - 252676
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||| |||||| ||||||||||||| || |||||||| |||||||||||||||||||||||| |||||||||||||||||||| || ||     
T  252807 acaaaccaagacaagaaatactttttactactttttatgcaacaattcatctttttcctataataaccttcatcatttaatatctcatttcatttacttc 252708  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||| |||||    
T  252707 tctctctacaataaataatcaagggtaataaa 252676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 23349 - 23219
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||| ||||||||     
T  23349 acaaactaagacaacaaatacattttactacttttgatacaacaatttatcttcttcctataataacctttatcatttaatatctcattttatatatttt 23250  T
Q  246 tctctctacaataaataatcaagggtgataa 276  Q
    ||||||  |||||||||| ||||||| ||||    
T  23249 tctctcggcaataaataaccaagggtaataa 23219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 11248994 - 11248864
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||| ||||||||||||||||||||||     
T  11248994 acaaactaagacaacaaatacattttactacttttgatacaataatttatctttttcttatagtaaccttcatcatgtaatatctcatttcatatatttc 11248895  T
Q  246 tctctctacaataaataatcaagggtgataa 276  Q
    |||||||  ||||||||||||||||| ||||    
T  11248894 tctctctgaaataaataatcaagggtaataa 11248864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 145 - 277
Target Start/End: Complemental strand, 50152648 - 50152515
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||||||| |    
T  50152648 atacaaatcaagacagcaaatactttttactacttttgatacaacaattcatctttttcctacaataaccttcatcatttaatatcttatttcatataat 50152549  T
Q  244 tatctctctacaataaataatcaagggtgataaa 277  Q
    ||| | |||||||||||||||||||||| |||||    
T  50152548 tatatttctacaataaataatcaagggtaataaa 50152515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 8973482 - 8973591
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |  | |||||||||  ||||||||||||||| |||| |    
T  8973482 caagacaacaaatac-ttttactactttttatacaacaatttatctttttcctataataacatcaatcatttaatacttcatttcatatatttctctccc 8973580  T
Q  252 tacaataaata 262  Q
    |||||||||||    
T  8973581 tacaataaata 8973591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 298198 - 298298
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatac 105  Q
    |||||||||||||| || |||||  |||||||||| |||| ||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||||    
T  298198 gaaatgttaacttgtgcccttagggcacatgttaagaattccactaatagtaattgtgtattggaaattgtgttaatttattactcaagttgtttaatac 298297  T
Q  106 t 106  Q
    |    
T  298298 t 298298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 10630616 - 10630526
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattt 244  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |  ||||||||  |||||||||||||||    
T  10630616 aagacaacaaatac-ttttactacttttgatacaacaaattatcttttttctataataaccttaattatttaatacttcatttcatatattt 10630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 45230728 - 45230662
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt 216  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  45230728 aaaccaagacaacaaatac-ttttactacttttgatacaacaatttatcttttttctctaataacctt 45230662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 5467277 - 5467164
Alignment:
Q  2 aagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttta 101  Q
    ||||||||| |||| ||| || |||||||||||| |||| |||||||   ||||||||| | |||||||||| |||| ||||| ||| ||||||||||||    
T  5467277 aagagaaatattaatttgtgcccttagaacacatattaagaatttcattgatagtaattatgtattggaaattgtgtgaatttgttattcaaattgttta 5467178  T
Q  102 atactccatccgtt 115  Q
    ||||||| ||||||    
T  5467177 atactccctccgtt 5467164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 262
Target Start/End: Complemental strand, 2572162 - 2572068
Alignment:
Q  169 ttttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    ||||||||||||||||| || || |||||||||| ||||||||||||| |  ||||||||| |||||||||||||||  |||||| |||||||||    
T  2572162 ttttactacttttgatataataaattatcttttttctataataaccttaattatttaatatttcatttcatatatttcactctctgcaataaata 2572068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 262
Target Start/End: Original strand, 38569643 - 38569760
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    ||||||| ||||||||||||||| ||||| || |||| |||||| |||||||||||||| |||||||||||| |  ||||||||  ||||| ||||||||    
T  38569643 atacaaatcaagacaacaaatac-ttttattatttttaatacaataatttatctttttcttataataaccttaataatttaatacttcattccatatatt 38569741  T
Q  244 tatctctctacaataaata 262  Q
    | ||||||  |||||||||    
T  38569742 tctctctcggcaataaata 38569760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 31487803 - 31487916
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  |||| || || ||||||||||||||| ||||| | ||||| |||||||||||||    ||||||||||||||| |||||||||     
T  31487803 acaaaccaagacaatcaataaatattgctacttttgatacaataatttctatttttactataataaccttatttatttaatatctcattacatatatttt 31487902  T
Q  246 tctctctacaataa 259  Q
    ||| ||||||||||    
T  31487903 tctttctacaataa 31487916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 41155487 - 41155372
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||| ||||| ||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||||| |  ||||||||  ||||||||||| |||     
T  41155487 acaaatcaagataacaaatac-ttttactacttttgagacaacaaattatctttttcgtataataaccttaattatttaatacttcatttcatatttttc 41155389  T
Q  246 tctctctacaataaata 262  Q
    |  |||| |||||||||    
T  41155388 ttcctctccaataaata 41155372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 51974219 - 51974318
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| ||||||||||||||| |||||  ||||||||||| |||||    
T  51974219 ttactacttttgatacaataatgtatacttttactataataaccttattcatttaatatttcatttcatatatttctctcttcacaataaataagcaagg 51974318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 38788995 - 38788923
Alignment:
Q  34 atgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    ||||||| ||||| || |||||||||| | |||||||||| |||||||||||||||| || ||||||||||||    
T  38788995 atgttaagaattttactaatagtaattatgtattggaaattgtgttaatttattacttaagttgtttaatact 38788923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 51972378 - 51972421
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  51972378 catttaatatctcatttcatatatttatctctctgcaataaata 51972421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 9127882 - 9127776
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    |||||||||||||   |||| || |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| ||| |||||||||||     
T  9127882 acaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcacttcatatatttc 9127783  T
Q  246 tctctct 252  Q
    |||||||    
T  9127782 tctctct 9127776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 264
Target Start/End: Complemental strand, 13566867 - 13566774
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    ||||||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  |||||||||||    
T  13566867 tactacttttgatgcaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataat 13566774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 32348191 - 32348074
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||| ||||  |||| || |||||||||||||||||| | || ||  |||| ||| |||||||||   ||||||||||||||||| ||||||||     
T  32348191 acaaaccaatacaatcaataaatattactacttttgatacaatacttcatacttttactagaataaccttattcatttaatatctcattttatatatttc 32348092  T
Q  246 tctctctacaataaataa 263  Q
    | |||| |||||||||||    
T  32348091 tttctccacaataaataa 32348074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 35700399 - 35700516
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||| ||||||||  |||| || ||||||||||||||| || |||| ||  |||| |||||||| ||||   ||||||||||||||||||||||||||     
T  35700399 acaaatcaagacaatcaataaatgttactacttttgatataataattgatacttttactataatagccttattcatttaatatctcatttcatatatttc 35700498  T
Q  246 tctctctacaataaataa 263  Q
    | ||||  ||||||||||    
T  35700499 tttctccgcaataaataa 35700516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 260
Target Start/End: Complemental strand, 6931328 - 6931212
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatt 243  Q
    |||| |||||| |||  ||||| |||| | |||||||||||||| ||||||| |||| ||||||||| ||||  | ||||||||||  |||||||||| |    
T  6931328 ataccaaccaatacactaaatatatttcaatacttttgatacaataatttatgttttgcctataatatccttgaatatttaatatcatatttcatatact 6931229  T
Q  244 tatctctctacaataaa 260  Q
    | ||||||| |||||||    
T  6931228 tttctctctccaataaa 6931212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 19349476 - 19349520
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||||||||  ||||||||||    
T  19349476 catttaatatctcatttcatatatttatctctccgcaataaataa 19349520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 30686599 - 30686507
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  30686599 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 30686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 43500646 - 43500602
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  43500646 catttaatatctcatttcatatatttctctctctgcaataaataa 43500602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8550473 - 8550370
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttt 100  Q
    |||| |||||||||||||| || | ||  ||| ||||||| |||| ||| ||||| |||| | |||||||||| ||||||||||||| || |||| ||||    
T  8550473 taagggaaatgttaacttgtgcccgtatgacatatgttaagaattccactaatagaaattatgtattggaaattgtgttaatttattgcttaaatagttt 8550374  T
Q  101 aata 104  Q
    ||||    
T  8550373 aata 8550370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 13507909 - 13507866
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  13507909 atttaatatctcatttcatatatttctctctccacaataaataa 13507866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 13515097 - 13515054
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| |||||| |||||||||||    
T  13515097 atttaatatctcatttcatatatttctctctccacaataaataa 13515054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 263
Target Start/End: Original strand, 39412533 - 39412652
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatt 243  Q
    ||||||||||| ||||  ||||  | || ||||||||||| ||| || |||| ||||| ||||||| |||||    |||||| |||||||||||||||||    
T  39412533 atacaaaccaaaacaatcaataattgtttctacttttgatgcaataagttatatttttactataatgaccttattaatttaacatctcatttcatatatt 39412632  T
Q  244 tatctctctacaataaataa 263  Q
    | ||||||| ||||||||||    
T  39412633 tctctctctgcaataaataa 39412652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 1677338 - 1677288
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  1677338 catttaatatctcatttcatatatttctctctccgcaataaataattaagg 1677288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 3491588 - 3491490
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||||||| || |||||  || ||||||| |||| ||| ||||| |||| | |||||||||| ||| ||||||||| |||||| | |||||||    
T  3491588 gaaatgttaacttgtgcccttagggcaaatgttaagaattccactaatagaaattatgtattggaaattgtgataatttattgctcaaaatttttaata 3491490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 5198816 - 5198890
Alignment:
Q  30 acacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    ||||||||||| ||||  || ||||| |||| | |||||||||| |||||||||||||| ||||| |||||||||    
T  5198816 acacatgttaagaattctactaatagaaattatgtattggaaattgtgttaatttattattcaaaatgtttaata 5198890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 12124830 - 12124740
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| ||| || ||||  |||| ||||||||| |||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  12124830 ctacttttgatgcaataagttatacttttactataataatcttattcatttaatatctcatttcatatatttctctctccgcaataaataa 12124740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 47588562 - 47588464
Alignment:
Q  8 aatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    |||||||||||| || || ||| |||||||||| ||||  || ||||| || | | ||||| |||| |||||||||||||| ||||| |||||||||||    
T  47588562 aatgttaacttgtgccctaagagcacatgttaagaattctactaatagaaactatgtattgaaaattgtgttaatttattattcaaaatgtttaatact 47588464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 13699363 - 13699282
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||||||||||||||||| ||||||    
T  13699363 ttactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatttcatatatttctctctc 13699282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 32994493 - 32994610
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  | |||||||||||||| ||| || || |  |||| ||||||| |||||   ||||||| ||||||||||||||||||     
T  32994493 acaaaccaagacaatcaataattattactacttttgatgcaataagttgtacttttactataatgaccttattcatttaacatctcatttcatatatttc 32994592  T
Q  246 tctctctacaataaataa 263  Q
    ||||||  ||||||||||    
T  32994593 tctctccgcaataaataa 32994610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 38597768 - 38597687
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||| |||||||  |||| |||||||||||||   |||||||||||| ||||||||||||| |||||| | |||||||||    
T  38597768 atacaataatttatacttttactataataaccttagtcatttaatatcttatttcatatatttctctctccataataaataa 38597687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 263
Target Start/End: Original strand, 52649759 - 52649870
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca--catttaatatctcatttcatatatttatctct 250  Q
    ||||||||  |||| || |||||||||||||||||| ||| |||| |||||| |||||| || |||  ||||||||||||  ||||||||||||  ||||    
T  52649759 caagacaatcaataaatgttactacttttgatacaataatatatccttttccaataatagcc-tcattcatttaatatcttgtttcatatatttcactct 52649857  T
Q  251 ctacaataaataa 263  Q
    ||  |||||||||    
T  52649858 ctgtaataaataa 52649870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 1024696 - 1024652
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  1024696 catttaatatctcatttcatatatttctctctccgcaataaataa 1024652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 262
Target Start/End: Complemental strand, 1859297 - 1859192
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||||| |||||||||||| |||| || ||||| | ||||  |||||| |||||| | ||| ||||||||||||||||||| |  ||||||    
T  1859297 caagacaacaaatac-ttttactactttagataaaataatttttttttt--ctataacaaccttaatcatctaatatctcatttcatatact--tctctc 1859203  T
Q  252 tacaataaata 262  Q
    || ||||||||    
T  1859202 tataataaata 1859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 2692545 - 2692465
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttat 86  Q
    |||||||||||||| |||||||  | |||||||||| ||||||| ||||  |||| ||||| | |||| ||||||||||||    
T  2692545 gaaatgttaacttgtgctcttatgatacatgttaaagatttcactaataaaaattttatatcgaaaattgtgttaatttat 2692465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 12231168 - 12231212
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  12231168 catttaatatcccatttcatatatttctctctccacaataaataa 12231212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 18033923 - 18033967
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  18033923 catttaatatctcatttcatatatttctctctccgcaataaataa 18033967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 20605721 - 20605765
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  20605721 catttaatatctcatttcatatatttctctctccgcaataaataa 20605765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 28679209 - 28679117
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||||||||||||| |||||||| ||||||  ||||||||||    
T  28679209 tactacttttgatgcaataaattatacttttactataatgaccttattcatttaatatctcatttgatatatttctctctccgcaataaataa 28679117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 29830893 - 29830849
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  29830893 catttaatatctcatttcatatatttctctctccgcaataaataa 29830849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 37609398 - 37609442
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  37609398 catttaatatctcatttcatatatttctctctccgcaataaataa 37609442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 44818594 - 44818550
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||    
T  44818594 catttaatatctcatttcatatatttctctctatgcaataaataa 44818550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 45226674 - 45226718
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||| || |||||||||||    
T  45226674 catttaatatctcatttcatatatttctctttccacaataaataa 45226718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 45368228 - 45368184
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  45368228 catttaatatctcatttcatatatttctctctccgcaataaataa 45368184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 49497292 - 49497248
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||    
T  49497292 catttaatatcacatttcatatatttatctctccgcaataaataa 49497248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 10507024 - 10506921
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||| ||||||||  |||| || |||||||||||||| ||| |||| ||  || | |||||||| ||||   ||||||||||||||||||||||||||     
T  10507024 acaaatcaagacaatcaataaatattactacttttgatgcaataattgatacttgtactataatagccttattcatttaatatctcatttcatatatttc 10506925  T
Q  246 tctc 249  Q
    ||||    
T  10506924 tctc 10506921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 52759241 - 52759126
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||  |||| ||||||||| |||||| || |||| ||||   ||||||| |||| |  ||||||||||  |||||||||||||     
T  52759241 acaaaccaagacactaaatgtatttcactactttttatacaataacttatgttttaattataatatccttaattatttaatatcatatttcatatatttc 52759142  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  52759141 tctctctgcaataaat 52759126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 250
Target Start/End: Complemental strand, 9362188 - 9362082
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    ||||||| |||||||   |||| ||||||||  || | |||||| |||||||  |||| |||||||||||||   |||||||||||| ||||||||||||    
T  9362188 atacaaatcaagacactcaataaattttactttttcttatacaataatttatacttttactataataaccttagtcatttaatatcttatttcatatatt 9362089  T
Q  244 tatctct 250  Q
    | |||||    
T  9362088 tctctct 9362082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 44182894 - 44182856
Alignment:
Q  225 atatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  44182894 atatctcatttcatatatttatctctccgcaataaataa 44182856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 263
Target Start/End: Original strand, 19929490 - 19929607
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  | || ||||||||||| ||| || ||||  |||| ||||||| |||||    |||||| ||||||||||||||||||     
T  19929490 acaaaccaagacaatcaataattgtttctacttttgatgcaataagttatacttttactataatgaccttattaatttaacatctcatttcatatatttc 19929589  T
Q  246 tctctctacaataaataa 263  Q
    ||||||  ||||||||||    
T  19929590 tctctccgcaataaataa 19929607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 35255671 - 35255582
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| || ||||  |||| ||||||| |||||   ||||||| ||||||||||||||||||||||||   ||||||||||    
T  35255671 tacttttgatgcaataagttatgcttttactataatgaccttgttcatttaacatctcatttcatatatttatctcttcgcaataaataa 35255582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 35483878 - 35483920
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||    
T  35483878 catttaatatctcatttcatatatt--tctctctgcaataaataa 35483920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 1427819 - 1427775
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||| | ||||||||||    
T  1427819 catttaatatcttatttcatatatttctctctttgcaataaataa 1427775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 2059909 - 2059953
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  2059909 catttaatatcttatttcatatatttttctctccgcaataaataa 2059953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 4051750 - 4051686
Alignment:
Q  30 acacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaa 94  Q
    ||||||||||| ||||  || ||||| |||| ||||||| |||| |||||||||||||| |||||    
T  4051750 acacatgttaagaattctactaatagaaattatatattgaaaattgtgttaatttattattcaaa 4051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 8464354 - 8464398
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  8464354 catttaatatcttatttcatatatttctctctccgcaataaataa 8464398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 24781831 - 24781875
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||    
T  24781831 catttaatatttcatttcatatatttctctctccgcaataaataa 24781875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 35531392 - 35531436
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||| |||||  ||||||||||||||||||||| ||||||||||    
T  35531392 catttgatatcctatttcatatatttatctctctgcaataaataa 35531436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 251
Target Start/End: Original strand, 50825621 - 50825701
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||| |||||||||||||||||| ||||||    
T  50825621 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaacatctcatttcatatatttctctctc 50825701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 6e-40; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 19812169 - 19812038
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||| || ||     
T  19812169 acaaaccaaaacaacaaatactttttactacttttgatgcaacaattcatctttttcttataataaccttcatcatttaatatctcatttcatttacttc 19812070  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    ||||||||||||||||||| |||||| |||||    
T  19812069 tctctctacaataaataattaagggtaataaa 19812038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 251
Target Start/End: Complemental strand, 15432883 - 15432779
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| ||||||||||||||||    
T  15432883 acaaactaagacaacaaatac-ttttactacttttgatacaacaatttatctttttcctataataaccttaataatttaatatttcatttcatatattta 15432785  T
Q  246 tctctc 251  Q
    ||||||    
T  15432784 tctctc 15432779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 259
Target Start/End: Original strand, 32250980 - 32251092
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||     
T  32250980 acaaaccaagacaacaaatac-ttttactacttttgatgcaagaatttatctttttcctataataaccttaatcatttaatacctcatttcatatatttc 32251078  T
Q  246 tctctctacaataa 259  Q
    ||||||| ||||||    
T  32251079 tctctctgcaataa 32251092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 11000838 - 11000953
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |||| | |||||||||  |||||||||||||||     
T  11000838 acaaactaagacaacaaatac-ttttactatttttgatacaacaatttatctttttcctataatatccttaatcatttaatacttcatttcatatatttc 11000936  T
Q  246 tctctctacaataaata 262  Q
    ||||| | |||||||||    
T  11000937 tctctatgcaataaata 11000953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 23777509 - 23777394
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    |||||||||||||  ||||| || |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| |||||||||||||||     
T  23777509 acaaaccaagacattaaataaatgttactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcatttcatatatttc 23777410  T
Q  246 tctctctacaataaat 261  Q
    |||||| |||||||||    
T  23777409 tctctccacaataaat 23777394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 34730775 - 34730656
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatt 243  Q
    |||||||||||||||   |||  || |||||||||||||||||||||| ||| ||||| |||||||||||||   |||| ||||||| ||||||||||||    
T  34730775 atacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttactataataaccttattcattcaatatctaatttcatatatt 34730676  T
Q  244 tatctctctacaataaataa 263  Q
    ||||||| | ||||||||||    
T  34730675 tatctctttgcaataaataa 34730656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 262
Target Start/End: Original strand, 2381060 - 2381153
Alignment:
Q  170 tttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||| |  |||||||   ||||||||||||||| ||||| | |||||||||    
T  2381060 tttactatttttgatacaacaaattatctttttcctataataaccttaattatttaatgcttcatttcatatatttctctctttgcaataaata 2381153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 13597598 - 13597505
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataacc-ttcacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||| || ||||||| ||||| ||||||||||| || |||||||||||||||||||||| |||| | ||||  ||||||||||    
T  13597598 ttactacttttgatataataatttatatttttactataataaccttttacatttaatatctcatttcataaatttctttctccgcaataaataa 13597505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 263
Target Start/End: Original strand, 26470753 - 26470868
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatc 247  Q
    ||||||||||||  ||||  | |||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||| |||||||||||||||||| ||    
T  26470753 aaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgaccttgttcatttaacatctcatttcatatatttctc 26470852  T
Q  248 tctctacaataaataa 263  Q
    |||| |||||||||||    
T  26470853 tctccacaataaataa 26470868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 34607313 - 34607194
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    |||||||||||||||   |||  || |||||||||||||||||||||| |||  |||| ||||||||| |||   | |||||||||| |||||||||||     
T  34607313 atacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatacttttactataataatcttattcgtttaatatctaatttcatatatg 34607214  T
Q  244 tatctctctacaataaataa 263  Q
    | ||||||| ||||||||||    
T  34607213 tctctctctgcaataaataa 34607194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 261
Target Start/End: Original strand, 26485715 - 26485826
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatc 247  Q
    |||||||||||   |||| || |||||||||||||||||| ||| |||  |||| |||||||||||||   |||||||||| ||||||||||||||  ||    
T  26485715 aaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcatttcatatatt--tc 26485812  T
Q  248 tctctacaataaat 261  Q
    |||| |||||||||    
T  26485813 tctccacaataaat 26485826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 7056196 - 7056285
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| || ||||  |||| |||||||||||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  7056196 tacttttgatgcaataagttattcttttactataataaccttggtcatttaatatctcatttcatatatttctctctccgcaataaataa 7056285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 9838174 - 9838267
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||| |||| ||  |||| |||||||| ||||   ||||||||||||||||||||||||||  |||||  ||||||||||    
T  9838174 ttactacttttgatacaataattgatacttttactataatagccttattcatttaatatctcatttcatatatttccctctccgcaataaataa 9838267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 52803 - 52751
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagggt 271  Q
    |||||||||||| ||||||||||||| |||||| |||||||||||| ||||||    
T  52803 catttaatatcttatttcatatatttctctctccacaataaataattaagggt 52751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 3621730 - 3621686
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  3621730 catttaatatctcatttcatatatttctctctctgcaataaataa 3621686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 262
Target Start/End: Complemental strand, 7632583 - 7632540
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  7632583 catttaatatctcatttcatatatttttatctctacaataaata 7632540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 17506419 - 17506502
Alignment:
Q  7 aaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattact 90  Q
    ||||| ||||||| ||||||||| || |||||||||||| ||| ||||| |||| | |||| ||||| ||||||||||| ||||    
T  17506419 aaatgctaacttgtgctcttagagcatatgttaaaaattccactaatagaaattatgtatttgaaattgtgttaatttaatact 17506502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 269
Target Start/End: Original strand, 1751484 - 1751582
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||||||||| |||||||||||| | ||||| ||||||||||| ||||    
T  1751484 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcttttcatatatttctttctctgcaataaataattaagg 1751582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 11431212 - 11431302
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||| || ||||  |||| | |||||||| || |  ||||||||||| ||||| |||||||||||||| |||||||||||    
T  11431212 ctacttttgatacaataacttatacttttacgataataactttactaatttaatatcttatttcctatatttatctctcgacaataaataa 11431302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 212
Target Start/End: Original strand, 31282570 - 31282626
Alignment:
Q  157 acaacaaatacattttactactttt--gatacaacaatttatctttttcctataataa 212  Q
    ||||||||||| |||||||||||||  |||| ||||||||||||||||||||||||||    
T  31282570 acaacaaatac-ttttactactttttggataaaacaatttatctttttcctataataa 31282626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 7235629 - 7235536
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||| |   |||  |||| |||||||||||||   ||||||||||||||||||||||||   |||||| |||||||||||    
T  7235629 ttactacttttgatacaatacaatatacttttactataataaccttattcatttaatatctcatttcatatatccctctctccacaataaataa 7235536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 8992737 - 8992656
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||| |||||||||||||||||||||||||    
T  8992737 ttactacttttgatgcaataagttatacttttactataatgaccttattcatttaacatctcatttcatatatttatctctc 8992656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 9017184 - 9017103
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    |||||||||||||| ||| || ||||  |||| ||||||| |||||   ||||||| |||||||||||||||||||||||||    
T  9017184 ttactacttttgatgcaataagttatacttttactataatgaccttattcatttaacatctcatttcatatatttatctctc 9017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 271
Target Start/End: Complemental strand, 22050261 - 22050136
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  | |||||||||||||| ||| || ||||  ||||  |||||| |||||   |||||||||||| |||||||||||||     
T  22050261 acaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttattataatgaccttattcatttaatatcttatttcatatatttc 22050162  T
Q  246 tctctctacaataaataatcaagggt 271  Q
    ||||||  ||||||||| | ||||||    
T  22050161 tctctccgcaataaatatttaagggt 22050136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 373863 - 373819
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  373863 catttaatatctcatttcatatatttctctctccgcaataaataa 373819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 1923992 - 1923948
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||||||||  | ||||||||||    
T  1923992 catttaatatctcatttcatatatttatctcattgcaataaataa 1923948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 24663519 - 24663475
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  24663519 catttaatatctcatttcatatatttctctctccgcaataaataa 24663475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 30237166 - 30237074
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||| | || ||  |||| |||||||||||||    |||||||||||||||| |||||||| ||| || |||||||||||    
T  30237166 tactacttttgatacaatacttcatacttttactataataaccttattaatttaatatctcattttatatatttctctttcaacaataaataa 30237074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 3850508 - 3850430
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctc 249  Q
    ||||||||||||| | ||||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||| ||||||    
T  3850508 tactacttttgatgccacaagctatatttttactataatgaccttattcatttaatatctcatttcatatatatatctc 3850430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 17124038 - 17124116
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctc 249  Q
    ||||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||||||||||||||||| ||||    
T  17124038 tactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatttcatatatttctctc 17124116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 17193344 - 17193254
Alignment:
Q  174 ctacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| ||| || ||||  |||| ||||||| |||||   |||||||||||||||||||||||| | ||||||  ||||||||||    
T  17193344 ctacttttgatgcaataagttattattttactataatgaccttattcatttaatatctcatttcatatatatctctctccgcaataaataa 17193254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 17836033 - 17835983
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||| ||||    
T  17836033 catttaatatatcatttcatatatttctctctccgcaataaataattaagg 17835983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 31767782 - 31767880
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||| ||| || |||||| |||||||||| |||| || |||||| |||| |  |||| |||| |||||||||||||  | ||| |||||||||    
T  31767782 gaaatgttaatttgcgcccttagagcacatgttaagaattccataaatagaaattatgcattgaaaattgtgttaatttattggtaaaaatgtttaata 31767880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 364643 - 364688
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    |||||||||| ||||||||||||||| ||||||  |||||||||||    
T  364643 catttaatatttcatttcatatatttctctctccgcaataaataat 364688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 1249750 - 1249635
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca--catttaatatctcatttcatatatttat 246  Q
    |||| |||||||  |||| || |||||| ||||||||||| |||| || ||||| |||||||   || ||  |||||||||| ||||||||||||||| |    
T  1249750 aaactaagacaatcaataaatgttactatttttgatacaataattgatatttttactataattgtct-cattcatttaatatttcatttcatatatttct 1249652  T
Q  247 ctctctacaataaataa 263  Q
    |||||  ||||||||||    
T  1249651 ctctccgcaataaataa 1249635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 23923817 - 23923858
Alignment:
Q  222 ttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||| ||||||  ||||||||||    
T  23923817 ttaatatctcatttcatatatttttctctccgcaataaataa 23923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 31854590 - 31854623
Alignment:
Q  219 catttaatatctcatttcatatatttatctctct 252  Q
    |||||||||||| |||||||||||||||||||||    
T  31854590 catttaatatcttatttcatatatttatctctct 31854623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 12732315 - 12732271
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||    
T  12732315 catttaatatttcatttcatatatttctctctccgcaataaataa 12732271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 22784721 - 22784813
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||| ||| |||  |||| |||||||| ||||   |||||||||  | |||| |||||||| |||||| |||||||||||    
T  22784721 tactacttttgatacaataatgtatacttttactataatagccttattcatttaataatttatttaatatatttttctctccacaataaataa 22784813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 30388861 - 30388817
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  30388861 catttaatatcttatttcatatatttctctctccgcaataaataa 30388817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 14284 - 14409
Alignment:
Q  153 caagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    ||||||||||||||  |||||||||||||||| ||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| || || ||||||    
T  14284 caagacaacaaataatttttactacttttgatgcaataatttatttttttcctataataaccttcatcatttaatatctcatttcatttacttctctctc 14383  T
Q  252 tacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||| |||||    
T  14384 tacaataaataatcaagggtaataaa 14409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 82; Significance: 1e-38; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 145 - 276
Target Start/End: Complemental strand, 369618 - 369488
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||||| ||||||||||||||    
T  369618 atacaaatcaagacaacaaatacattttactacttttgatacaacagtttatctttttcctataataacttttatcatttaatatttcatttcatatatt 369519  T
Q  244 tatctctctacaataaataatcaagggtgataa 276  Q
      ||||||| |||||||||| ||||||| ||||    
T  369518 --tctctctgcaataaataaccaagggtaataa 369488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 138831 - 138875
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||||  |||||||||    
T  138831 catttaatatctcatttcatatatttctctctctgtaataaataa 138875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 148491 - 148399
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| || || ||||  |||| ||||||| |||||   |||||||||| ||||||| ||||||| ||||||  ||||||||||    
T  148491 tactacttttgatataataagttatacttttactataatgaccttattcatttaatatatcatttcttatatttctctctccgcaataaataa 148399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 28967261 - 28967392
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||| ||||||||||| |||||||| ||||||| |||||||| |||||||||||||||||||||| | |||||||||||||||||||| || ||     
T  28967261 acaaaccaaaacaacaaatactttttactatttttgatgcaacaattcatctttttcctataataacctttatcatttaatatctcatttcatttacttc 28967360  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    ||||||||| |||||||||||||||| |||||    
T  28967361 tctctctacgataaataatcaagggtaataaa 28967392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 147 - 276
Target Start/End: Complemental strand, 37077383 - 37077253
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||     
T  37077383 acaaaccaagataacaaatacattttactactttttatacaataatttatcttttttctataataaccttcataatttaatatctcatttcatatatttc 37077284  T
Q  246 tctctctacaataaataatcaagggtgataa 276  Q
    ||| ||| |||||||||| ||| ||| ||||    
T  37077283 tctatctgcaataaataaccaatggtaataa 37077253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 147 - 277
Target Start/End: Original strand, 38148066 - 38148196
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||| |||||||||||||||| |||| |||||||||||| || |||| ||||||||| ||||||||| |||| ||||||||||||||||||||||| ||     
T  38148066 acaagccaagacaacaaatactttttgctacttttgataaaataattcatctttttc-tataataactttcatcatttaatatctcatttcatatacttc 38148164  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    |||||||||||||||||||||||||| |||||    
T  38148165 tctctctacaataaataatcaagggtaataaa 38148196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 147 - 277
Target Start/End: Complemental strand, 45065285 - 45065154
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||| |||||||| |||||||||| |||| |||||||||||| ||||||| || ||     
T  45065285 acaaaccaagacaacaaatattttttactacttttgatgcaacaattcatcttttttctataataacattcatcatttaatatcttatttcatttacttc 45065186  T
Q  246 tctctctacaataaataatcaagggtgataaa 277  Q
    ||||| |||||||||||||||||||| |||||    
T  45065185 tctctttacaataaataatcaagggtaataaa 45065154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 37660950 - 37660844
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| |||     
T  37660950 acaaaccaagacaacaaatgcattttactacttttaatacaacaatttttctttttcctataataaccttcctcatttaatatctcatttcatatgtttc 37660851  T
Q  246 tctctct 252  Q
    |||||||    
T  37660850 tctctct 37660844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 151 - 277
Target Start/End: Complemental strand, 30544726 - 30544602
Alignment:
Q  151 accaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctc 249  Q
    ||||||||||||||||| ||||||||||||||||||||   || ||||||||||||||||||| |||  |||||||||||| |||||||||| ||||| |    
T  30544726 accaagacaacaaatactttttactacttttgatacaa---ttcatctttttcctataataactttcttcatttaatatcttatttcatatacttatccc 30544630  T
Q  250 tctacaataaataatcaagggtgataaa 277  Q
    |||||| ||||||||||||||| |||||    
T  30544629 tctacagtaaataatcaagggtaataaa 30544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 7529741 - 7529852
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaata-tctcatttcatatatttatctctc 251  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| | ||||||||||||||| ||||||    
T  7529741 aagacaactaataaattttactacttttgatacaacaatttatcattttcctataatagccttcatcatttaatattttcatttcatatatttctctctc 7529840  T
Q  252 tacaataaataa 263  Q
    | ||||||||||    
T  7529841 tgcaataaataa 7529852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 3041773 - 3041660
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||  ||| | |||||||||  ||||||||| ||||      
T  3041773 acaaaccaagacaacaaatac-ttttattacttttaatacaacaatttatctttttcctataatattcttaatcatttaatacttcatttcatgtatt-- 3041677  T
Q  246 tctctctacaataaata 262  Q
    |||||||||||||||||    
T  3041676 tctctctacaataaata 3041660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 928066 - 928177
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatc 247  Q
    |||| |||| ||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||| | |||||||||  |||||| |||||||  ||    
T  928066 aaactaagataacaaatac-ttttactatttttgatgtaacaatttatctttttcctataataaccttaatcatttaatacttcatttaatatatt--tc 928162  T
Q  248 tctctacaataaata 262  Q
    |||||||||||||||    
T  928163 tctctacaataaata 928177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 175 - 262
Target Start/End: Complemental strand, 25787522 - 25787434
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaata 262  Q
    ||||||||||||||||||||||| ||||||||||||| |||| | |||||||||  ||||||||||||||| ||||| | |||||||||    
T  25787522 tacttttgatacaacaatttatccttttcctataatatccttaatcatttaatacttcatttcatatatttctctctatgcaataaata 25787434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 104
Target Start/End: Original strand, 14776271 - 14776369
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||||||| ||  ||||| |||||||||| ||||| |  | |||||||| | ||||| |||| ||||||||||||||||||||||||||||||    
T  14776271 gaaatgttaacttgtgccattagagcacatgttaagaattttaatattagtaattatgtattgaaaattgtgttaatttattactcaaattgtttaata 14776369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35327932 - 35327828
Alignment:
Q  1 taagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttt 100  Q
    |||| |||||||||||||| || ||||  |||||||| || |||| ||| |||||||||||| ||||| |||  ||||||||||||||||||| ||||||    
T  35327932 taagggaaatgttaacttgtgcccttaagacacatgt-aagaattccactaatagtaattgtgtattgaaaactgtgttaatttattactcaagttgttt 35327834  T
Q  101 aatact 106  Q
    ||||||    
T  35327833 aatact 35327828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 29056225 - 29056173
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctt 199  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  29056225 acaaaccaagacaacaaatatattttactacttttgatgcaacaatttatctt 29056173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 145 - 263
Target Start/End: Complemental strand, 14541546 - 14541427
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatt 243  Q
    ||||||||||| ||||  |||| || |||||||||||||||| | | || ||  |||| |||||||||||||   ||||||||||||||||| |||||||    
T  14541546 atacaaaccaatacaatcaataaatattactacttttgatacgatacttcatacttttactataataaccttattcatttaatatctcattttatatatt 14541447  T
Q  244 tatctctctacaataaataa 263  Q
    | |||||| |||||||||||    
T  14541446 tctctctccacaataaataa 14541427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 263
Target Start/End: Original strand, 13000948 - 13001058
Alignment:
Q  154 aagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatatttatctctct 252  Q
    |||||||  |||| || |||||||||||||||||| |||| || ||||| |||||||| ||||    ||||||||||||||||||||||||| ||||||     
T  13000948 aagacaatcaataaatgttactacttttgatacaataattaatatttttgctataatagccttatttatttaatatctcatttcatatatttctctctcc 13001047  T
Q  253 acaataaataa 263  Q
     ||||||||||    
T  13001048 gcaataaataa 13001058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 171 - 248
Target Start/End: Original strand, 36404895 - 36404973
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatct 248  Q
    |||||||||||||| ||| || |||| ||||| |||||||||||||   ||||||||||||||||||||||||||||||    
T  36404895 ttactacttttgatgcaataagttatatttttactataataaccttattcatttaatatctcatttcatatatttatct 36404973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 9707000 - 9706883
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||| ||||  |||| || |||||||||||||||||| | || ||  |||| |||||||||||||   ||||| ||||||||||| |||||||||    
T  9707000 acaaaccaatacaatcaataaatattactacttttgatacaatatttcatacttttactataataaccttattcatttgatatctcattttatatattta 9706901  T
Q  246 tctctctacaataaataa 263  Q
    |||||| | |||||||||    
T  9706900 tctctccataataaataa 9706883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 838100 - 838215
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    |||||||||||||  |||| ||||| |||||||||||| ||| || |||| |||| ||||||||| | || |  ||||||||||  |||||||||||||     
T  838100 acaaaccaagacactaaatgcatttcactacttttgatgcaataacttatgttttgcctataatatctttaattatttaatatcatatttcatatatttc 838199  T
Q  246 tctctctacaataaat 261  Q
    ||||||| ||||||||    
T  838200 tctctctgcaataaat 838215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 9374023 - 9374125
Alignment:
Q  2 aagagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttta 101  Q
    ||||||||| |||||||  ||  ||||| ||||||||||||||||||  || || |||| | |||||||||| || |||||||||| |||||| ||||||    
T  9374023 aagagaaatattaacttatgcctttagagcacatgttaaaaatttcattaacagaaattatgtattggaaattgttttaatttattgctcaaaatgttta 9374122  T
Q  102 ata 104  Q
    |||    
T  9374123 ata 9374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 261
Target Start/End: Original strand, 33947480 - 33947574
Alignment:
Q  168 attttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatatttatctctctacaataaat 261  Q
    |||| |||| ||||||||||| ||||||| |||| ||||||||| |||| |  ||||||||||  |||| |||||||| ||||||||||||||||    
T  33947480 atttcactatttttgatacaataatttatgttttgcctataatatccttaattatttaatatcatattttatatatttctctctctacaataaat 33947574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 40534249 - 40534319
Alignment:
Q  36 gttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaatact 106  Q
    ||||| |||| ||| ||| |||||||| ||||| |||| ||||||||||||||||||| ||||||||||||    
T  40534249 gttaagaattccactaatcgtaattgtgtattgaaaattgtgttaatttattactcaagttgtttaatact 40534319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 14308533 - 14308488
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataat 264  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  14308533 catttaatatctcatttcatatatttatctctcctcaataaataat 14308488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 4883743 - 4883699
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  4883743 catttaatatctcatttcatatatttctctctctgcaataaataa 4883699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 11222419 - 11222463
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||    
T  11222419 catttaatatctcatttcatatatttctctctctgcaataaataa 11222463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 15183056 - 15183148
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  15183056 tactacttttgatgcaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 15183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 15893635 - 15893727
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| ||  |||  |||| |||||||||||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  15893635 tactacttttgatgcaataagctatacttttactataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 15893727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 41885765 - 41885721
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  41885765 catttaatatctcatttcatatatttctctctccacaataaataa 41885721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 37093637 - 37093546
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttcacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| || ||||  |||| ||||||| || |   |||||||||||||||||||||||||| ||| ||| ||||||||||    
T  37093637 tactacttttgatgcaataagttatacttttactataatgacttattcatttaatatctcatttcatatatttctctttctgcaataaataa 37093546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 10812339 - 10812289
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||| ||||    
T  10812339 catttaatatctcatttcatatatttctctctccgcaataaataattaagg 10812289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 263
Target Start/End: Complemental strand, 13754169 - 13754051
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaattta-tctttttcctataataacctt-cacatttaatatctcatttcatatattt 244  Q
    ||||||||||||||  | || || |||||||||||||||||| |||||| |  |||| |||||||| ||||   |||||||||| |||| ||||||||||    
T  13754169 acaaaccaagacaatcattaaatgttactacttttgatacaataatttactacttttactataatagccttattcatttaatatttcatgtcatatattt 13754070  T
Q  245 atctctctacaataaataa 263  Q
     ||||||  ||||||||||    
T  13754069 ctctctccgcaataaataa 13754051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 2013038 - 2012957
Alignment:
Q  183 atacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||| |||||||  |||| |||||||||||||    ||||||||||| ||||||||||||| |||||| |||||||||||    
T  2013038 atacaataatttatacttttactataataaccttagtaatttaatatcttatttcatatatttctctctccacaataaataa 2012957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 19594535 - 19594446
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||| ||  ||| ||||| ||||||| |||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  19594535 tacttttgatgcaataagctatatttttactataatgaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 19594446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 268
Target Start/End: Complemental strand, 36375713 - 36375664
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaag 268  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| ||||    
T  36375713 catttaatatctcatttcatatatttctctctccgcaataaataaccaag 36375664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 147 - 271
Target Start/End: Complemental strand, 44360646 - 44360521
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||||||||||||  ||||  | |||||||||||||| ||| || ||||  ||||  |||||| |||||   |||||||||||| |||||||||||||     
T  44360646 acaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttattataatgaccttattcatttaatatcttatttcatatatttc 44360547  T
Q  246 tctctctacaataaataatcaagggt 271  Q
    ||||||  ||||||||| | ||||||    
T  44360546 tctctccgcaataaatatttaagggt 44360521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 479076 - 479120
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  479076 catttaatatctcatttcatatatttctctctccgcaataaataa 479120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 10263897 - 10263853
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  10263897 catttaatatctcatttcatatatttctctctccgcaataaataa 10263853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 26342720 - 26342676
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  26342720 catttaatatctcatttcatatatttctctctccgcaataaataa 26342676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 31025043 - 31025087
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| |||||||||||||||||||| | |||||||||    
T  31025043 catttaatatcttatttcatatatttatctctccataataaataa 31025087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 32656240 - 32656324
Alignment:
Q  3 agagaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttatt 87  Q
    ||||||||||||||||| || |||||  |||||||||| |||||||| ||||| |||  | ||||| || | |||||||||||||    
T  32656240 agagaaatgttaacttgtgcccttagggcacatgttaagaatttcactaatagaaatcatgtattgaaacttgtgttaatttatt 32656324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 34399342 - 34399298
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  34399342 catttaatatctcatttcatatatttctctctccgcaataaataa 34399298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 269
Target Start/End: Original strand, 35158384 - 35158504
Alignment:
Q  150 aaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatttatct 248  Q
    ||||||||||   |||| || |||||||||||||||||| ||| |||  |||| || ||||||||||   |||||| ||| ||||||||||||||| | |    
T  35158384 aaccaagacattcaataaatattactacttttgatacaataatatatacttttactgtaataaccttattcatttactatttcatttcatatatttcttt 35158483  T
Q  249 ctctacaataaataatcaagg 269  Q
    ||| ||| ||||||| |||||    
T  35158484 ctccacagtaaataagcaagg 35158504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 38072329 - 38072373
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||    
T  38072329 catttaatatctcatttcatatatttctctctccgcaataaataa 38072373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 38186155 - 38186199
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| | |||| |||||||||||    
T  38186155 catttaatatctcatttcatatatttctttctccacaataaataa 38186199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 3363723 - 3363680
Alignment:
Q  220 atttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||    
T  3363723 atttaatatctcatttcatatatttctctctccgcaataaataa 3363680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 147 - 261
Target Start/End: Complemental strand, 37354202 - 37354087
Alignment:
Q  147 acaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatattta 245  Q
    ||||| ||||||| ||| || |||| |||||||||||||||| || |||| |||| ||||||||| | || |  ||||||||||  |||| ||||||||     
T  37354202 acaaatcaagacaccaattatatttcactacttttgatacaataacttatgttttgcctataatatctttaattatttaatatcatattttatatatttt 37354103  T
Q  246 tctctctacaataaat 261  Q
    |||||||  |||||||    
T  37354102 tctctctctaataaat 37354087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 269
Target Start/End: Complemental strand, 14288571 - 14288521
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataatcaagg 269  Q
    |||||||||||||||||||||||||| ||||||  | ||||||||| ||||    
T  14288571 catttaatatctcatttcatatatttctctctccgcgataaataattaagg 14288521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 30326180 - 30326110
Alignment:
Q  34 atgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    ||||||| |||||||  || || |||| | ||||| |||| |||||||||||||||||||| |||||||||    
T  30326180 atgttaagaatttcattaagagaaattatgtattgaaaattgtgttaatttattactcaaaatgtttaata 30326110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 33830368 - 33830302
Alignment:
Q  34 atgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgttt 100  Q
    ||||||| ||||| || ||||| |||| | |||||||||| ||||||||||||| |||||| |||||    
T  33830368 atgttaagaattttactaatagaaattatgtattggaaattgtgttaatttattgctcaaaatgttt 33830302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 251
Target Start/End: Complemental strand, 4654908 - 4654827
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctc 251  Q
    |||||||||||||| ||| || || | ||||| ||||||| |||||   ||||||||||||||||||||| |||| ||||||    
T  4654908 ttactacttttgatgcaataagttgtgtttttactataatgaccttattcatttaatatctcatttcatacatttctctctc 4654827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 11560150 - 11560194
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||| ||||||||| |||||  |||||||||||    
T  11560150 catttaatatctcattgcatatatttctctcttcacaataaataa 11560194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 15677394 - 15677438
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| ||||||  ||||||||||    
T  15677394 catttaatatcacatttcatatatttctctctccgcaataaataa 15677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 28145675 - 28145719
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||||||||||||| || ||||||  ||||||||||    
T  28145675 catttaatatctcatttcatataattctctctccgcaataaataa 28145719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 30264705 - 30264749
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||    
T  30264705 catttaatatttcatttcatatatttctctctccgcaataaataa 30264749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 32543890 - 32543934
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| | |||||  |||||||||    
T  32543890 catttaatatctcatttcatatatttttttctctgtaataaataa 32543934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 34357366 - 34357274
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||| ||||||| ||| || |||| ||||| ||||||| |||||   ||||||||||||||||| |||||||| ||| || ||| |||||||    
T  34357366 tactatttttgatgcaataagttatatttttactataatgaccttattcatttaatatctcattttatatatttctctttccacagtaaataa 34357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 145 - 263
Target Start/End: Original strand, 265 - 384
Alignment:
Q  145 atacaaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataacctt-cacatttaatatctcatttcatatatt 243  Q
    |||||||||||||||   |||  || |||||||||||||||||||||| ||| ||||| |||||||||||||   |||| ||||||| ||||||||||||    
T  265 atacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttactataataaccttattcattcaatatctaatttcatatatt 364  T
Q  244 tatctctctacaataaataa 263  Q
    ||||||| | ||||||||||    
T  365 tatctctttgcaataaataa 384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 104
Target Start/End: Complemental strand, 36508 - 36410
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    |||||||||||||| || |||| | |||||||||| |||| ||| ||||| |||| | |||||||||| ||||||||||||| |||||| | |||||||    
T  36508 gaaatgttaacttgtgcccttaaagcacatgttaagaattccactaatagaaattatgtattggaaattgtgttaatttatttctcaaaatatttaata 36410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 7 - 104
Target Start/End: Original strand, 21233 - 21330
Alignment:
Q  7 aaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaattgtttaata 104  Q
    ||||||||||||| ||  |||| ||||||||||| |||| ||  ||||  |||| |||||||||||| |||||||||||||| ||||| |||||||||    
T  21233 aaatgttaacttgtgcctttaggacacatgttaagaattccaataataaaaattatatattggaaattgtgttaatttattattcaaaatgtttaata 21330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 21157 - 21121
Alignment:
Q  175 tacttttgatacaacaatttatctttttcctataata 211  Q
    ||||||||||| || ||||||||||||||||||||||    
T  21157 tacttttgatataataatttatctttttcctataata 21121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 263
Target Start/End: Complemental strand, 4726 - 4611
Alignment:
Q  149 aaaccaagacaacaaatacattttactacttttgatacaacaatttatctttttcctataataaccttcac-atttaatatctcatttcatatatttatc 247  Q
    ||||||||||||  ||||  | |||||||||||||| ||| || |||| ||||| ||||||| |||||    ||||||||||| ||||||||||||| ||    
T  4726 aaaccaagacaatcaataattgttactacttttgatgcaataagttatatttttactataatgaccttatttatttaatatcttatttcatatatttctc 4627  T
Q  248 tctctacaataaataa 263  Q
    |||| |||||||||||    
T  4626 tctccacaataaataa 4611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 77276 - 77184
Alignment:
Q  172 tactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||||| ||| ||  |||  |||| |||||||||||||   |||||||||||||||||||||||||| ||||||  ||||||||||    
T  77276 tactacttttgatgcaataaactatacttttactataataaccttattcatttaatatctcatttcatatatttctctctccgcaataaataa 77184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 14773 - 14866
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||| |||| ||  |||| ||||||||  |||   ||||||||||||||| |||||||||| ||||||  ||||||||||    
T  14773 ttactacttttgatacaataattgatacttttactataatagacttattcatttaatatctcatgtcatatatttctctctccgcaataaataa 14866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 184191 - 184272
Alignment:
Q  183 atacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||| |||||||  |||| |||||||| ||||   |||||||||||| ||||||||||||||||||||  ||||||||||    
T  184191 atacaataatttatacttttactataatagccttagtcatttaatatcttatttcatatatttatctctccgcaataaataa 184272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 6676 - 6764
Alignment:
Q  6 gaaatgttaacttgggctcttagaacacatgttaaaaatttcacaaatagtaattgtatattggaaatcgtgttaatttattactcaaa 94  Q
    |||||||||||||| ||  ||||| ||||||||||  ||| || |||||| |||| ||| |||||||| | ||||||||||| ||||||    
T  6676 gaaatgttaacttgtgcctttagagcacatgttaaggattccataaatagaaattatatcttggaaattgcgttaatttattgctcaaa 6764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 8294 - 8250
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||||||||||||||| | ||||| ||||||||||    
T  8294 catttaatatctcatttcatatatttctttctctgcaataaataa 8250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 19 - 112
Alignment:
Q  171 ttactacttttgatacaacaatttatctttttcctataataaccttca-catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||||| ||| || || |  |||| ||||||| |||||   ||||||| |||||||||||||||||| ||||||  ||||||||||    
T  19 ttactacttttgatgcaataagttgtacttttactataatgaccttattcatttaacatctcatttcatatatttctctctccgcaataaataa 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 69240 - 69196
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    |||||||||||| ||||||||||||| ||||||  ||||||||||    
T  69240 catttaatatcttatttcatatatttctctctccgcaataaataa 69196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 195688 - 195731
Alignment:
Q  219 catttaatatctcatttcatatatttatctctctacaataaataa 263  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||    
T  195688 catttaatatc-catttcatatatttttctctccacaataaataa 195731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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