View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15856_high_24 (Length: 243)
Name: NF15856_high_24
Description: NF15856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15856_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 8498678 - 8498905
Alignment:
| Q |
1 |
tgtaagccctattctgaaggaggtttgggattaagatcactaattactttgaatgaagccaccaatctgaagattttatgggatctgaagaactctaatg |
100 |
Q |
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| T |
8498678 |
tgtaagccctattctgaaggaggtttgggattaagatcactaattactttgaatgaagccaccaatttgaagattttatgggatctgaagaactctaatg |
8498777 |
T |
|
| Q |
101 |
aagattcggctttgttgttgagaagtaaagtcttcagaggtaagagggttatcactcatcacattttttcttctctttggagtagcataaaatccgaagt |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8498778 |
aagattcggctttgttgttgagaagtcaagtcttcagaggtaagagagttatcactcatcacattttttcttctctttggagtagcataaaatccgaagt |
8498877 |
T |
|
| Q |
201 |
ttctactttagagaataattgcagatgg |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
8498878 |
ttctactttagagaataattgcagatgg |
8498905 |
T |
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