View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15856_low_14 (Length: 355)
Name: NF15856_low_14
Description: NF15856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15856_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 86 - 341
Target Start/End: Original strand, 50016705 - 50016960
Alignment:
| Q |
86 |
cataagtgagggtacaacaacaataagggagggtgtgaattggaattgggaggaatatatgccatggttgggaggtgttgtggatgaacaaatgtcatgg |
185 |
Q |
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| T |
50016705 |
cataagtgagggtacaacaacaataagggagggtgtgaattggaattgggaggaatatatgccatggttgggaggtgttgtggatgaacaaatgtcatgg |
50016804 |
T |
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| Q |
186 |
ggttcaacttggttccccgggtgggatatggatttcatgggtgaagcttttaataatgctctttataatgatgttgtttgggatgatgatatctggaatc |
285 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
50016805 |
ggttcaacttggttccccgggtgggatatggatttcatgggtgaagcttttaataatgctctttataatgatgttgtttgggaagatgatatctggaatc |
50016904 |
T |
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| Q |
286 |
tcaaaaatcaaattccaattccattacatggaaagagatttgaattagagtagaag |
341 |
Q |
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| T |
50016905 |
tcaaaaatcaaattccaattccattacatggaaagagatttgaattggagtagaag |
50016960 |
T |
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