View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15856_low_24 (Length: 299)
Name: NF15856_low_24
Description: NF15856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15856_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 287
Target Start/End: Original strand, 26688131 - 26688410
Alignment:
| Q |
9 |
gaagaatattcatcactagtgtgttatgtgtacaacacaaagatatatccaattattgaagtgtaccgtatacgcctatcaaaagaagagaatcccacgt |
108 |
Q |
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| T |
26688131 |
gaagaatattcatcactagtgtgttatgtgtacaacacaaagatatatccaattattgaagtgtaccgtatacgcctatcaaaagaagagaatcccacgt |
26688230 |
T |
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| Q |
109 |
taaaaagagagataaagattgaaaaagatggttggtgttttccatagtatgaataaag-nnnnnnnaactgttgaaaacgttcctttaagagtttagcca |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |
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| T |
26688231 |
taaaaagagagataaagattgaaaaagatggttggtgttttccatagtatgaacaaagttttttttaactgttgaaaacgttcctttaagagtttagcca |
26688330 |
T |
|
| Q |
208 |
tcatgttttatgtttatgtttggtaacactgataaattagcttaatataacttattggattagcttataagatttttgat |
287 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||| |
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| T |
26688331 |
tcatgttttatgtttatgtttggtaacactgatagattagcttaatataatttattggattagcttataagacttttgat |
26688410 |
T |
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