View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15856_low_25 (Length: 284)
Name: NF15856_low_25
Description: NF15856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15856_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 37 - 249
Target Start/End: Original strand, 2264320 - 2264532
Alignment:
| Q |
37 |
tgtataactctctgtacataaactagccatacacgccataatgaaattccaattcaagtagtcccaaatgttgatgtatatattgatttaacattttcnn |
136 |
Q |
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| T |
2264320 |
tgtataactctctgtacataaactagctatacacgccataatgaaattccaattcaagtagtcccaaatgttgatgtatatattgatttaacattttctt |
2264419 |
T |
|
| Q |
137 |
nnnnngaaaaagattaatggtgtgtttggttgagcatccacagtacaaattattgcgtttctatacaaatattatcgcagttttgagaagttttaaaact |
236 |
Q |
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|||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |
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| T |
2264420 |
tttttgaaaaagattaatggtgtgtttggttgagcattctcagtacaaattattgcatttctatacaaatattgtcgcagttttgagaagttttaaaact |
2264519 |
T |
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| Q |
237 |
aagcttttgcatt |
249 |
Q |
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||||||||||||| |
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| T |
2264520 |
aagcttttgcatt |
2264532 |
T |
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