View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15856_low_38 (Length: 201)

Name: NF15856_low_38
Description: NF15856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15856_low_38
NF15856_low_38
[»] chr8 (29 HSPs)
chr8 (53-156)||(35505406-35505509)
chr8 (1-34)||(2161386-2161419)
chr8 (1-34)||(3306201-3306234)
chr8 (1-34)||(7140605-7140638)
chr8 (1-34)||(10129102-10129135)
chr8 (1-34)||(11117144-11117177)
chr8 (1-34)||(13496879-13496912)
chr8 (1-34)||(14816272-14816305)
chr8 (1-34)||(14829435-14829468)
chr8 (1-34)||(38527819-38527852)
chr8 (1-33)||(7750667-7750699)
chr8 (1-32)||(26682068-26682099)
chr8 (1-32)||(35678421-35678452)
chr8 (1-31)||(39701949-39701979)
chr8 (1-34)||(4080540-4080573)
chr8 (1-34)||(4084689-4084722)
chr8 (1-34)||(4102996-4103029)
chr8 (1-34)||(8284716-8284749)
chr8 (5-34)||(11923013-11923042)
chr8 (1-34)||(12131981-12132014)
chr8 (1-34)||(13328087-13328120)
chr8 (1-34)||(19343983-19344016)
chr8 (1-34)||(31812111-31812144)
chr8 (1-34)||(33514647-33514680)
chr8 (1-34)||(38843702-38843735)
chr8 (1-34)||(40210967-40211000)
chr8 (1-34)||(40716273-40716306)
chr8 (1-34)||(43717699-43717732)
chr8 (1-34)||(45005968-45006001)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-34)||(52925-52958)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-34)||(145676-145709)
[»] chr7 (22 HSPs)
chr7 (1-34)||(9331960-9331993)
chr7 (1-34)||(19889339-19889372)
chr7 (1-34)||(24250312-24250345)
chr7 (1-34)||(33342987-33343020)
chr7 (1-34)||(34270264-34270297)
chr7 (1-34)||(47120340-47120373)
chr7 (1-32)||(19868114-19868145)
chr7 (3-34)||(24857498-24857529)
chr7 (1-32)||(39757256-39757287)
chr7 (1-31)||(3562024-3562054)
chr7 (1-31)||(36548606-36548636)
chr7 (1-31)||(47457608-47457638)
chr7 (1-34)||(4969771-4969804)
chr7 (1-34)||(5909428-5909461)
chr7 (1-30)||(7170005-7170034)
chr7 (1-34)||(27696705-27696738)
chr7 (1-34)||(29398261-29398294)
chr7 (1-34)||(32117813-32117846)
chr7 (1-34)||(39869121-39869154)
chr7 (1-34)||(45501457-45501490)
chr7 (1-34)||(46290009-46290042)
chr7 (1-33)||(12086077-12086109)
[»] chr6 (17 HSPs)
chr6 (1-34)||(8977613-8977646)
chr6 (1-34)||(14228272-14228305)
chr6 (1-34)||(17552733-17552766)
chr6 (1-34)||(28943915-28943948)
chr6 (1-34)||(29863449-29863482)
chr6 (1-34)||(31791063-31791096)
chr6 (1-34)||(33017723-33017756)
chr6 (1-33)||(1814928-1814960)
chr6 (1-33)||(2087000-2087032)
chr6 (1-33)||(5363039-5363071)
chr6 (4-34)||(26602580-26602610)
chr6 (1-34)||(10345686-10345719)
chr6 (1-30)||(17596315-17596344)
chr6 (1-34)||(18332835-18332868)
chr6 (1-34)||(24979296-24979329)
chr6 (1-34)||(31568111-31568144)
chr6 (1-34)||(34692352-34692385)
[»] chr5 (19 HSPs)
chr5 (1-34)||(2795522-2795555)
chr5 (1-34)||(11636730-11636763)
chr5 (1-34)||(14466636-14466669)
chr5 (1-34)||(30328473-30328506)
chr5 (1-34)||(30839780-30839813)
chr5 (1-34)||(31366098-31366131)
chr5 (1-34)||(36597578-36597611)
chr5 (1-33)||(40512951-40512983)
chr5 (1-34)||(3398218-3398251)
chr5 (1-34)||(5958270-5958303)
chr5 (1-30)||(8103726-8103755)
chr5 (1-34)||(11250103-11250136)
chr5 (1-34)||(15190871-15190904)
chr5 (1-34)||(15241239-15241272)
chr5 (1-34)||(16883757-16883790)
chr5 (1-34)||(18150377-18150410)
chr5 (1-34)||(18841852-18841885)
chr5 (1-34)||(34578010-34578043)
chr5 (1-33)||(24014834-24014866)
[»] chr4 (23 HSPs)
chr4 (1-34)||(9971711-9971744)
chr4 (1-34)||(40049557-40049590)
chr4 (1-34)||(48910981-48911014)
chr4 (1-34)||(50352301-50352334)
chr4 (1-33)||(9759288-9759320)
chr4 (1-31)||(23553571-23553601)
chr4 (5-34)||(2096869-2096898)
chr4 (1-34)||(3085350-3085383)
chr4 (1-34)||(3726935-3726968)
chr4 (1-34)||(7349687-7349720)
chr4 (1-34)||(8736957-8736990)
chr4 (1-34)||(10658590-10658623)
chr4 (1-34)||(10872735-10872768)
chr4 (1-34)||(16667531-16667564)
chr4 (1-34)||(17409822-17409855)
chr4 (1-34)||(23545474-23545507)
chr4 (1-34)||(39876807-39876840)
chr4 (1-34)||(45742366-45742399)
chr4 (1-34)||(49228355-49228388)
chr4 (1-34)||(49332331-49332364)
chr4 (1-34)||(54495784-54495817)
chr4 (1-33)||(10389414-10389446)
chr4 (1-33)||(19468193-19468225)
[»] chr3 (14 HSPs)
chr3 (1-34)||(2571267-2571300)
chr3 (1-34)||(3863328-3863361)
chr3 (1-34)||(11610913-11610946)
chr3 (1-34)||(12515620-12515653)
chr3 (1-34)||(51618048-51618081)
chr3 (1-33)||(39365278-39365310)
chr3 (3-34)||(10307765-10307796)
chr3 (1-32)||(20938057-20938088)
chr3 (1-31)||(51339330-51339360)
chr3 (1-30)||(37444149-37444178)
chr3 (1-34)||(38389445-38389478)
chr3 (1-34)||(42180050-42180083)
chr3 (1-34)||(50204401-50204434)
chr3 (1-34)||(51400166-51400199)
[»] chr2 (21 HSPs)
chr2 (1-34)||(5583704-5583737)
chr2 (1-34)||(10690781-10690814)
chr2 (1-34)||(12016665-12016698)
chr2 (1-34)||(15411769-15411802)
chr2 (1-34)||(16126705-16126738)
chr2 (1-34)||(16919300-16919333)
chr2 (1-34)||(19228424-19228457)
chr2 (1-34)||(22705453-22705486)
chr2 (1-34)||(23932563-23932596)
chr2 (1-34)||(26229999-26230032)
chr2 (1-34)||(27665190-27665223)
chr2 (1-34)||(35729114-35729147)
chr2 (1-34)||(39904194-39904227)
chr2 (1-31)||(12919498-12919528)
chr2 (4-34)||(29795056-29795086)
chr2 (1-34)||(4821281-4821314)
chr2 (1-34)||(14377423-14377456)
chr2 (1-34)||(20566164-20566197)
chr2 (1-34)||(26003638-26003671)
chr2 (1-34)||(29981371-29981404)
chr2 (1-34)||(43806358-43806391)
[»] chr1 (23 HSPs)
chr1 (1-34)||(313748-313781)
chr1 (1-34)||(1502866-1502899)
chr1 (1-34)||(34050430-34050463)
chr1 (1-34)||(39150473-39150506)
chr1 (1-34)||(51382370-51382403)
chr1 (1-33)||(44918024-44918056)
chr1 (1-31)||(32716309-32716339)
chr1 (1-34)||(399569-399602)
chr1 (1-34)||(3168215-3168248)
chr1 (1-34)||(6180184-6180217)
chr1 (1-30)||(6754474-6754503)
chr1 (1-34)||(7825005-7825038)
chr1 (1-34)||(17919452-17919485)
chr1 (1-34)||(22331621-22331654)
chr1 (1-34)||(23576560-23576593)
chr1 (1-34)||(23591696-23591729)
chr1 (1-34)||(30171877-30171910)
chr1 (1-34)||(30187418-30187451)
chr1 (1-34)||(34801966-34801999)
chr1 (1-34)||(39627718-39627751)
chr1 (1-30)||(41624832-41624861)
chr1 (1-33)||(38539086-38539118)
chr1 (1-33)||(38561304-38561336)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-32)||(193379-193410)
[»] scaffold0727 (1 HSPs)
scaffold0727 (1-31)||(5692-5722)
[»] scaffold0111 (1 HSPs)
scaffold0111 (1-34)||(37261-37294)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-34)||(31847-31880)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-34)||(13084-13117)


Alignment Details
Target: chr8 (Bit Score: 96; Significance: 3e-47; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 35505509 - 35505406
Alignment:
Q  53 gactcttgtatttgaacaccatttattttgatacgtcgtttataaactcattttctctctgtatctttcatctcattgtatcatttacatacaatatcta 152  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35505509 gactctagtatttgaacaccatttattttgatgcgtcgtttataaactcattttctctctgtatctttcatctcattgtatcatttacatacaatatcta 35505410  T
Q  153 tcaa 156  Q
    ||||    
T  35505409 tcaa 35505406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2161419 - 2161386
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2161419 aacatgtgcaatattgcacatgttagacaaaccc 2161386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3306201 - 3306234
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  3306201 aacatgtgcaatattgcacatgttagacaaaccc 3306234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7140605 - 7140638
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  7140605 aacatgtgcaatattgcacatgttagacaaaccc 7140638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10129135 - 10129102
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  10129135 aacatgtgcaatattgcacatgttagacaaaccc 10129102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11117144 - 11117177
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11117144 aacatgtgcaatattgcacatgttagacaaaccc 11117177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13496879 - 13496912
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  13496879 aacatgtgcaatattgcacatgttagacaaaccc 13496912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14816272 - 14816305
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14816272 aacatgtgcaatattgcacatgttagacaaaccc 14816305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14829468 - 14829435
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14829468 aacatgtgcaatattgcacatgttagacaaaccc 14829435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 38527852 - 38527819
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  38527852 aacatgtgcaatattgcacatgttagacaaaccc 38527819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7750699 - 7750667
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  7750699 aacatgtgcaatattgcacatgttagacaaacc 7750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26682099 - 26682068
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  26682099 aacatgtgcaatattgcacatgttagacaaac 26682068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35678421 - 35678452
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  35678421 aacatgtgcaatattgcacatgttagacaaac 35678452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 39701949 - 39701979
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  39701949 aacatgtgcaatattgcacatgttagacaaa 39701979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4080540 - 4080573
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  4080540 aacatgtgcaatattacacatgttagacaaaccc 4080573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4084689 - 4084722
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  4084689 aacatgtgcaatattacacatgttagacaaaccc 4084722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 4102996 - 4103029
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  4102996 aacatgtgcaatattacacatgttagacaaaccc 4103029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8284716 - 8284749
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  8284716 aacatgtgcaatactgcacatgttagacaaaccc 8284749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 11923042 - 11923013
Alignment:
Q  5 tgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||    
T  11923042 tgtgcaatattgcacatgttagacaaaccc 11923013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12132014 - 12131981
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  12132014 aacatgtgcaatgttgcacatgttagacaaaccc 12131981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 13328087 - 13328120
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  13328087 aacatatgcaatattgcacatgttagacaaaccc 13328120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19343983 - 19344016
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  19343983 aacatgtgcaatattgcacatgtaagacaaaccc 19344016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31812144 - 31812111
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  31812144 aacatgtgcaatgttgcacatgttagacaaaccc 31812111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 33514647 - 33514680
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||||||||||| |||||||    
T  33514647 aacatgtgcaatattgcacatgttaggcaaaccc 33514680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 38843735 - 38843702
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  38843735 aacatgtgcaatgttgcacatgttagacaaaccc 38843702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40210967 - 40211000
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  40210967 aacatatgcaatattgcacatgttagacaaaccc 40211000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40716306 - 40716273
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  40716306 aacatgtgcaatattgcacatgttagataaaccc 40716273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43717699 - 43717732
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  43717699 aacatgtgcaacattgcacatgttagacaaaccc 43717732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45006001 - 45005968
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  45006001 aacatgtgcaatgttgcacatgttagacaaaccc 45005968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 52925 - 52958
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  52925 aacatgtgcaatattgcacatgttagacaaaccc 52958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 145709 - 145676
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  145709 aacatgtgcaatattgcacatgttagacaaaccc 145676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 9331993 - 9331960
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  9331993 aacatgtgcaatattgcacatgttagacaaaccc 9331960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19889372 - 19889339
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  19889372 aacatgtgcaatattgcacatgttagacaaaccc 19889339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 24250345 - 24250312
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  24250345 aacatgtgcaatattgcacatgttagacaaaccc 24250312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33343020 - 33342987
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33343020 aacatgtgcaatattgcacatgttagacaaaccc 33342987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34270297 - 34270264
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  34270297 aacatgtgcaatattgcacatgttagacaaaccc 34270264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47120340 - 47120373
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  47120340 aacatgtgcaatattgcacatgttagacaaaccc 47120373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19868145 - 19868114
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  19868145 aacatgtgcaatattgcacatgttagacaaac 19868114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 24857529 - 24857498
Alignment:
Q  3 catgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||    
T  24857529 catgtgcaatattgcacatgttagacaaaccc 24857498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39757256 - 39757287
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  39757256 aacatgtgcaatattgcacatgttagacaaac 39757287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 3562024 - 3562054
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  3562024 aacatgtgcaatattgcacatgttagacaaa 3562054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 36548606 - 36548636
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  36548606 aacatgtgcaatattgcacatgttagacaaa 36548636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 47457608 - 47457638
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  47457608 aacatgtgcaatattgcacatgttagacaaa 47457638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4969804 - 4969771
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  4969804 aacatgtgcaatgttgcacatgttagacaaaccc 4969771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5909428 - 5909461
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||||||||||| |||||||    
T  5909428 aacatgtgcaatattgcacatgttagtcaaaccc 5909461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 7170034 - 7170005
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  7170034 aacatgtgcaatattgcacatgttagacaa 7170005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 27696738 - 27696705
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  27696738 aacatgtgcaatattccacatgttagacaaaccc 27696705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29398261 - 29398294
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  29398261 aacatgtgcaatgttgcacatgttagacaaaccc 29398294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 32117846 - 32117813
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  32117846 aacatgtgcaatattgcacatgttagataaaccc 32117813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39869154 - 39869121
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||| |||||||||||||||    
T  39869154 aacatgtgcaatattgcatatgttagacaaaccc 39869121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45501490 - 45501457
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  45501490 aacatgtgcaatgttgcacatgttagacaaaccc 45501457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 46290042 - 46290009
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  46290042 aacatgtgcaattttgcacatgttagacaaaccc 46290009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12086077 - 12086109
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    ||||||||||||||| |||||||||||||||||    
T  12086077 aacatgtgcaatattacacatgttagacaaacc 12086109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8977613 - 8977646
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  8977613 aacatgtgcaatattgcacatgttagacaaaccc 8977646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14228272 - 14228305
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14228272 aacatgtgcaatattgcacatgttagacaaaccc 14228305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17552733 - 17552766
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  17552733 aacatgtgcaatattgcacatgttagacaaaccc 17552766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28943915 - 28943948
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  28943915 aacatgtgcaatattgcacatgttagacaaaccc 28943948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29863449 - 29863482
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  29863449 aacatgtgcaatattgcacatgttagacaaaccc 29863482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31791063 - 31791096
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  31791063 aacatgtgcaatattgcacatgttagacaaaccc 31791096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 33017756 - 33017723
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  33017756 aacatgtgcaatattgcacatgttagacaaaccc 33017723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 1814928 - 1814960
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  1814928 aacatgtgcaatattgcacatgttagacaaacc 1814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 2087000 - 2087032
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  2087000 aacatgtgcaatattgcacatgttagacaaacc 2087032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5363039 - 5363071
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  5363039 aacatgtgcaatattgcacatgttagacaaacc 5363071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 26602580 - 26602610
Alignment:
Q  4 atgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||||||||||||||||    
T  26602580 atgtgcaatattgcacatgttagacaaaccc 26602610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 10345686 - 10345719
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  10345686 aacatgtgcaatattgcacatgttagacagaccc 10345719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 17596344 - 17596315
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  17596344 aacatgtgcaatattgcacatgttagacaa 17596315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18332835 - 18332868
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  18332835 aacatgtgcaatgttgcacatgttagacaaaccc 18332868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24979296 - 24979329
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  24979296 aacatgtgcaatgttgcacatgttagacaaaccc 24979329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 31568144 - 31568111
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  31568144 aacatgtgcaatattgcacgtgttagacaaaccc 31568111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34692385 - 34692352
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  34692385 aacatgtgcaatgttgcacatgttagacaaaccc 34692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2795555 - 2795522
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2795555 aacatgtgcaatattgcacatgttagacaaaccc 2795522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11636763 - 11636730
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11636763 aacatgtgcaatattgcacatgttagacaaaccc 11636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14466636 - 14466669
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  14466636 aacatgtgcaatattgcacatgttagacaaaccc 14466669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30328473 - 30328506
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  30328473 aacatgtgcaatattgcacatgttagacaaaccc 30328506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30839813 - 30839780
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  30839813 aacatgtgcaatattgcacatgttagacaaaccc 30839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31366098 - 31366131
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  31366098 aacatgtgcaatattgcacatgttagacaaaccc 31366131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 36597611 - 36597578
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  36597611 aacatgtgcaatattgcacatgttagacaaaccc 36597578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 40512983 - 40512951
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  40512983 aacatgtgcaatattgcacatgttagacaaacc 40512951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3398251 - 3398218
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  3398251 aacatgtgcaatgttgcacatgttagacaaaccc 3398218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5958270 - 5958303
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  5958270 aacatgtgtaatattgcacatgttagacaaaccc 5958303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 8103726 - 8103755
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  8103726 aacatgtgcaatattgcacatgttagacaa 8103755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 11250103 - 11250136
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  11250103 aacatgtgcaatattgcacatgttaaacaaaccc 11250136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15190904 - 15190871
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  15190904 aacatatgcaatattgcacatgttagacaaaccc 15190871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15241239 - 15241272
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||| |||||||||||||||    
T  15241239 aacatgtgcaatattgcatatgttagacaaaccc 15241272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16883757 - 16883790
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  16883757 aacatgtgcaatgttgcacatgttagacaaaccc 16883790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 18150410 - 18150377
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  18150410 aacatatgcaatattgcacatgttagacaaaccc 18150377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 18841852 - 18841885
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  18841852 aacatgtgcaatgttgcacatgttagacaaaccc 18841885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34578043 - 34578010
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  34578043 aacatgtggaatattgcacatgttagacaaaccc 34578010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 24014834 - 24014866
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  24014834 aacatgtgcaatgttgcacatgttagacaaacc 24014866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 9971711 - 9971744
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  9971711 aacatgtgcaatattgcacatgttagacaaaccc 9971744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40049590 - 40049557
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  40049590 aacatgtgcaatattgcacatgttagacaaaccc 40049557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48910981 - 48911014
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  48910981 aacatgtgcaatattgcacatgttagacaaaccc 48911014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 50352334 - 50352301
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  50352334 aacatgtgcaatattgcacatgttagacaaaccc 50352301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 9759288 - 9759320
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  9759288 aacatgtgcaatattgcacatgttagacaaacc 9759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 23553601 - 23553571
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  23553601 aacatgtgcaatattgcacatgttagacaaa 23553571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 2096898 - 2096869
Alignment:
Q  5 tgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||    
T  2096898 tgtgcaatattgcacatgttagacaaaccc 2096869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3085383 - 3085350
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  3085383 aacatgtgcaatgttgcacatgttagacaaaccc 3085350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3726968 - 3726935
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  3726968 aacatgtgcaatattgcacatgtaagacaaaccc 3726935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7349720 - 7349687
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  7349720 aacatgtgcaatattgcacgtgttagacaaaccc 7349687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8736957 - 8736990
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  8736957 aacatgtgcaatgttgcacatgttagacaaaccc 8736990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 10658590 - 10658623
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  10658590 aacatgtgtaatattgcacatgttagacaaaccc 10658623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 10872735 - 10872768
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  10872735 aacatgtgtaatattgcacatgttagacaaaccc 10872768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16667531 - 16667564
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  16667531 aacatgtgcaatgttgcacatgttagacaaaccc 16667564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17409855 - 17409822
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  17409855 aacatgtgcaatgttgcacatgttagacaaaccc 17409822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23545507 - 23545474
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  23545507 aacatgtgcaatgttgcacatgttagacaaaccc 23545474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 39876840 - 39876807
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  39876840 aacatatgcaatattgcacatgttagacaaaccc 39876807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 45742399 - 45742366
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  45742399 aacatgtgcaatgttgcacatgttagacaaaccc 45742366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49228388 - 49228355
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  49228388 aacatatgcaatattgcacatgttagacaaaccc 49228355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49332364 - 49332331
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  49332364 aacatgtgaaatattgcacatgttagacaaaccc 49332331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 54495784 - 54495817
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  54495784 aacatgtgcaatgttgcacatgttagacaaaccc 54495817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10389414 - 10389446
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||| ||||||||||||||||||||||||    
T  10389414 aacatgtgtaatattgcacatgttagacaaacc 10389446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 19468225 - 19468193
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||| ||||||||||||||||||||    
T  19468225 aacatgtgcaatgttgcacatgttagacaaacc 19468193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000003; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 2571300 - 2571267
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  2571300 aacatgtgcaatattgcacatgttagacaaaccc 2571267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3863361 - 3863328
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  3863361 aacatgtgcaatattgcacatgttagacaaaccc 3863328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11610946 - 11610913
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11610946 aacatgtgcaatattgcacatgttagacaaaccc 11610913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 12515620 - 12515653
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12515620 aacatgtgcaatattgcacatgttagacaaaccc 12515653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51618081 - 51618048
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  51618081 aacatgtgcaatattgcacatgttagacaaaccc 51618048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 39365278 - 39365310
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  39365278 aacatgtgcaatattgcacatgttagacaaacc 39365310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 10307796 - 10307765
Alignment:
Q  3 catgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||    
T  10307796 catgtgcaatattgcacatgttagacaaaccc 10307765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 20938088 - 20938057
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  20938088 aacatgtgcaatattgcacatgttagacaaac 20938057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 51339330 - 51339360
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  51339330 aacatgtgcaatattgcacatgttagacaaa 51339360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 37444178 - 37444149
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  37444178 aacatgtgcaatattgcacatgttagacaa 37444149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 38389478 - 38389445
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  38389478 aacatgtgcaatgttgcacatgttagacaaaccc 38389445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42180083 - 42180050
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  42180083 aacatgtgcaatgttgcacatgttagacaaaccc 42180050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 50204434 - 50204401
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  50204434 aacatgtgcaatgttgcacatgttagacaaaccc 50204401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51400199 - 51400166
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  51400199 aacatgtgcaatgttgcacatgttagacaaaccc 51400166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 5583704 - 5583737
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  5583704 aacatgtgcaatattgcacatgttagacaaaccc 5583737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 10690814 - 10690781
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  10690814 aacatgtgcaatattgcacatgttagacaaaccc 10690781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 12016698 - 12016665
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  12016698 aacatgtgcaatattgcacatgttagacaaaccc 12016665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15411769 - 15411802
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  15411769 aacatgtgcaatattgcacatgttagacaaaccc 15411802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16126705 - 16126738
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  16126705 aacatgtgcaatattgcacatgttagacaaaccc 16126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16919300 - 16919333
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  16919300 aacatgtgcaatattgcacatgttagacaaaccc 16919333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19228457 - 19228424
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  19228457 aacatgtgcaatattgcacatgttagacaaaccc 19228424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22705486 - 22705453
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  22705486 aacatgtgcaatattgcacatgttagacaaaccc 22705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23932596 - 23932563
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  23932596 aacatgtgcaatattgcacatgttagacaaaccc 23932563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26229999 - 26230032
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  26229999 aacatgtgcaatattgcacatgttagacaaaccc 26230032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 27665190 - 27665223
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  27665190 aacatgtgcaatattgcacatgttagacaaaccc 27665223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35729147 - 35729114
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  35729147 aacatgtgcaatattgcacatgttagacaaaccc 35729114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39904194 - 39904227
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  39904194 aacatgtgcaatattgcacatgttagacaaaccc 39904227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 12919498 - 12919528
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  12919498 aacatgtgcaatattgcacatgttagacaaa 12919528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 34
Target Start/End: Complemental strand, 29795086 - 29795056
Alignment:
Q  4 atgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||||||||||||||||    
T  29795086 atgtgcaatattgcacatgttagacaaaccc 29795056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4821314 - 4821281
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  4821314 aacatatgcaatattgcacatgttagacaaaccc 4821281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 14377456 - 14377423
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||| ||||||||||||||    
T  14377456 aacatgtgcaatattgcacgtgttagacaaaccc 14377423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 20566164 - 20566197
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||| ||||    
T  20566164 aacatgtgcaatattgcacatgttagacagaccc 20566197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 26003638 - 26003671
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  26003638 aacatgtgcaatgttgcacatgttagacaaaccc 26003671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 29981371 - 29981404
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||| |||||||||||||||    
T  29981371 aacatgtgcaatattgcatatgttagacaaaccc 29981404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43806391 - 43806358
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  43806391 aacatgtgcaatgttgcacatgttagacaaaccc 43806358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 313781 - 313748
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  313781 aacatgtgcaatattgcacatgttagacaaaccc 313748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1502866 - 1502899
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  1502866 aacatgtgcaatattgcacatgttagacaaaccc 1502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 34050430 - 34050463
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  34050430 aacatgtgcaatattgcacatgttagacaaaccc 34050463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39150473 - 39150506
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  39150473 aacatgtgcaatattgcacatgttagacaaaccc 39150506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 51382403 - 51382370
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  51382403 aacatgtgcaatattgcacatgttagacaaaccc 51382370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 44918056 - 44918024
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    |||||||||||||||||||||||||||||||||    
T  44918056 aacatgtgcaatattgcacatgttagacaaacc 44918024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 32716309 - 32716339
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  32716309 aacatgtgcaatattgcacatgttagacaaa 32716339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 399569 - 399602
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  399569 aacatgtgcaatattgcgcatgttagacaaaccc 399602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3168215 - 3168248
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  3168215 aacatgtgcaatgttgcacatgttagacaaaccc 3168248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 6180217 - 6180184
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  6180217 aacatgtgcaatgttgcacatgttagacaaaccc 6180184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 6754503 - 6754474
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  6754503 aacatgtgcaatattgcacatgttagacaa 6754474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 7825005 - 7825038
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  7825005 aacatgtgcaatgttgcacatgttagacaaaccc 7825038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17919485 - 17919452
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||||| ||||||||||||||||||||||||||    
T  17919485 aacatgtacaatattgcacatgttagacaaaccc 17919452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22331654 - 22331621
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  22331654 aacatgtgcaatgttgcacatgttagacaaaccc 22331621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23576560 - 23576593
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||||||||| |||||||||||||||    
T  23576560 aacatgtgcaatattgcagatgttagacaaaccc 23576593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 23591729 - 23591696
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  23591729 aacatgtgcaatgttgcacatgttagacaaaccc 23591696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30171910 - 30171877
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  30171910 aacatgtgcaatgttgcacatgttagacaaaccc 30171877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 30187451 - 30187418
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  30187451 aacatgtgcaatgttgcacatgttagacaaaccc 30187418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34801999 - 34801966
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  34801999 aacatgtgcaatgttgcacatgttagacaaaccc 34801966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39627718 - 39627751
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||| |||||||||||||||||||||||||    
T  39627718 aacatgtgtaatattgcacatgttagacaaaccc 39627751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 41624861 - 41624832
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaa 30  Q
    ||||||||||||||||||||||||||||||    
T  41624861 aacatgtgcaatattgcacatgttagacaa 41624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38539118 - 38539086
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    ||||||||||||||||||||||||||| |||||    
T  38539118 aacatgtgcaatattgcacatgttagataaacc 38539086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 38561336 - 38561304
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaacc 33  Q
    ||||||||||||||||||||||||||| |||||    
T  38561336 aacatgtgcaatattgcacatgttagataaacc 38561304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 193379 - 193410
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaac 32  Q
    ||||||||||||||||||||||||||||||||    
T  193379 aacatgtgcaatattgcacatgttagacaaac 193410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 5722 - 5692
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaa 31  Q
    |||||||||||||||||||||||||||||||    
T  5722 aacatgtgcaatattgcacatgttagacaaa 5692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 37261 - 37294
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  37261 aacatgtgcaatgttgcacatgttagacaaaccc 37294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 31847 - 31880
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    |||||||||||| |||||||||||||||||||||    
T  31847 aacatgtgcaatgttgcacatgttagacaaaccc 31880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 13117 - 13084
Alignment:
Q  1 aacatgtgcaatattgcacatgttagacaaaccc 34  Q
    ||||| ||||||||||||||||||||||||||||    
T  13117 aacatatgcaatattgcacatgttagacaaaccc 13084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University