View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15858_high_3 (Length: 420)
Name: NF15858_high_3
Description: NF15858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15858_high_3 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 374; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 20 - 413
Target Start/End: Original strand, 4678546 - 4678938
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4678546 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacactcacctaggtggagaggactttgataacag |
4678645 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4678646 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttaaggaggttgagaactgcctgcgagagg |
4678745 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4678746 |
gcaaagaggacactctctttcgcctttgtcaccactgttga-gtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
4678844 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatgcgcgggagtgatattgatgatgt |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4678845 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatgcgcgggagtaatattgatgatgt |
4678938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 22 - 336
Target Start/End: Original strand, 34466783 - 34467089
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| |||||| ||| |||| | |||||||||||| || |||||| |||| ||||| ||||| || |||||||||||||||| |||| |
|
|
| T |
34466783 |
acttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacactcacctcggacgagaggactttgataatagaa |
34466882 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
||| |||| |||||| | |||||||||| | |||| ||||| ||| |||||| ||| | | | | || |||||||||||||||| ||||||| || |
|
|
| T |
34466883 |
tggcgaaccactttgcaaaggagttcaagaggaagcataataaggatattagtggaaaccctagagctttgaggaggttgagaactgcgtgcgagaatgc |
34466982 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
|||||||||||||| |||||| | |||||||| |||||||||||| | ||| ||| ||||| ||| || || |||||||||||||||||| |
|
|
| T |
34466983 |
aaagaggacactct--------tttgtcgctactgttgaaatagattctttatatgaggtaattgacttccattcgtcaatcactcgtgccaagtttgag |
34467074 |
T |
|
| Q |
322 |
gaaattaatatggac |
336 |
Q |
| |
|
||||| ||||||||| |
|
|
| T |
34467075 |
gaaatcaatatggac |
34467089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 82 - 375
Target Start/End: Complemental strand, 15595152 - 15594859
Alignment:
| Q |
82 |
ggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacg |
181 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||||||||| |||||||||| |||| ||||| | |||||| || ||||| |||| | |||| |
|
|
| T |
15595152 |
ggaaacactcaccttggaggagaggactttgataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgggaacc |
15595053 |
T |
|
| Q |
182 |
caaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcaggg |
281 |
Q |
| |
|
||| |||| |||| ||||||||||| ||||| |||||||| ||| ||||||||| | |||||| || |||||||||||| ||||||| | || |
|
|
| T |
15595052 |
caagggccttgaggagattgagaactgcgtgcgaaagggcaaaaagggtactctcttttactactgtcactaccattgaggtagattgtttatttaacgg |
15594953 |
T |
|
| Q |
282 |
aatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtctt |
375 |
Q |
| |
|
|| ||||| | |||||| |||||||| |||||||||| ||||| || |||||| |||| || || |||||| | | ||| ||||||||||| |
|
|
| T |
15594952 |
tattgacttcttttcatcggttactcgttccaagtttgaagaaatcaacatggacttttttaaggattgtatgaagatagttgagagttgtctt |
15594859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 354
Target Start/End: Original strand, 52549269 - 52549334
Alignment:
| Q |
289 |
ttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatg |
354 |
Q |
| |
|
||||||||||| || | | | ||||||||||||||||| |||||||||||||| || ||||||||| |
|
|
| T |
52549269 |
ttttcttcatcgatcaatagggccaagtttgaggaaatgaatatggacctttttaaggagtgtatg |
52549334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 33)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 386
Target Start/End: Complemental strand, 8659543 - 8659177
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||| |||||||||| ||||| || |||||||||||||||| ||| |
|
|
| T |
8659543 |
gtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggagaggactttgatagcag |
8659444 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
8659443 |
aatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttgagaactgcctgtgagagg |
8659344 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| | ||||| || |||||||||| ||||| |
|
|
| T |
8659343 |
gcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagacttctgttcattaatcactcgtgccaggtttg |
8659244 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaa |
386 |
Q |
| |
|
||||||| |||||||| ||||| || ||||||||| |||||||| ||||||||||||| |||||||| |
|
|
| T |
8659243 |
aggaaatgaatatggatctttttaatgagtgtatgaaaactgttgagagttgtcttagcgattcaaa |
8659177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 20 - 389
Target Start/End: Complemental strand, 8654630 - 8654261
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
||||||||||||||||||| || | ||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||||| |||||||||||||| |
|
|
| T |
8654630 |
gtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccactgctggaaacacgcacctagggggagaagactttgataacag |
8654531 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
8654530 |
aatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaaattagcggtaacccaaaatccttaaggaggttgagaactgcctgtgagagg |
8654431 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
||||| |||| ||||||||| | |||||||||||||||||||||||| |||||||| |||||| |||||||||||||| || |||||||| || |||| |
|
|
| T |
8654430 |
gcaaaaaggatactctcttttacttttgtcaccactgttgaggtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgctaaatttg |
8654331 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagat |
389 |
Q |
| |
|
||||||||||||||||| ||||||| |||||||| | | |||| | |||||||| || ||||||||||| |
|
|
| T |
8654330 |
aggaaattaatatggactttttcaatgagtgtatcaatattgttgacagttgtctcagagattcaaagat |
8654261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 411
Target Start/End: Complemental strand, 1301640 - 1301249
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| |||||| || ||||| || ||||||||||||||||| || |
|
|
| T |
1301640 |
gtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagccactggtggaaatactcaccttggaggagaggactttgataatag |
1301541 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||| |||||||||||| ||| ||| ||||| |||||||||||| ||| || |||||| |
|
|
| T |
1301540 |
aatggtgagctactttgtagaggagttcagaaagaagaataaagtggacattagtggtaaccagaaatccttaaggaggttgagaattgcgtgtgagagg |
1301441 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
||||| |||||||||||||| || || |||||||| |||||||| |||||||||||||||||||| ||||| | ||||| || |||||||||||||||| |
|
|
| T |
1301440 |
gcaaaaaggacactctcttttgctttagtcaccaccgttgaggtcgattctttatttcagggaatcgacttctgttcattaatcactcgtgccaagtttg |
1301341 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatgcgcgggagtgatattgatgat |
411 |
Q |
| |
|
|||||||||||||||| ||||| || ||||||| |||| ||| ||||||||||||| |||||||| || || ||||||||| |||||| |
|
|
| T |
1301340 |
aggaaattaatatggatctttttaatgagtgtacaaaaaccgttgagagttgtcttagcgattcaaaaatatgcatgagtgatatcgatgat |
1301249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 20 - 389
Target Start/End: Original strand, 10494362 - 10494731
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
|||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||| || ||||| ||||| || ||||||||||| |||||||| |
|
|
| T |
10494362 |
gtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagccactgcaggtaacactcaccttgggggagaggacttcgataacag |
10494461 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||| ||| ||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
10494462 |
aatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgggaatccaaaatccttaaggaggttgagaactgcctgtgagagg |
10494561 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
||||| |||| ||||||||| | ||||||||||| |||||||| ||| |||||||| |||||| |||||||||||||| || ||||||||||| |||| |
|
|
| T |
10494562 |
gcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttg |
10494661 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagat |
389 |
Q |
| |
|
||||||||||||| ||| |||||| |||||||||| | | |||| | |||||||| || ||||||||||| |
|
|
| T |
10494662 |
aggaaattaatatagactttttcatcgagtgtatgaatattgttgacagttgtctcagggattcaaagat |
10494731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 22 - 354
Target Start/End: Complemental strand, 8667597 - 8667265
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||||| |||||||||||| ||||||||||| |||||||| ||||| || || |||||||| |||||||||| |
|
|
| T |
8667597 |
acttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagccactgcaggaaacactcaccttgggggcgaggacttcgataacagaa |
8667498 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||||||||| |||||||| ||| ||||| ||||| ||||| ||||||||||||||||||| |||||||| |
|
|
| T |
8667497 |
tggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagtcagaacccaaaatccttaaggaggttgagaactgcctgtgagagggc |
8667398 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
||| |||| ||||||||| || ||||| |||||||||||||||||| |||||||| |||||| ||||||| |||||| ||||||||||| || |||||| |
|
|
| T |
8667397 |
aaaaaggatactctcttttgcttttgttaccactgttgaggtagatgctttatttacgggaatcgacttttgttcatcaattactcgtgctaaatttgag |
8667298 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatg |
354 |
Q |
| |
|
||| |||| |||||| ||||||| ||||||||| |
|
|
| T |
8667297 |
gaacttaacatggactttttcaatgagtgtatg |
8667265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 20 - 389
Target Start/End: Original strand, 13333444 - 13333813
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
|||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||||| || |||||||| ||||| || ||||| ||||| |||||||| |
|
|
| T |
13333444 |
gtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagccaccgcaggaaacactcaccttgggggagaagacttcgataacag |
13333543 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||||||||| || || || ||| |||| ||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
13333544 |
aatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagtgggaacccaaaatccttaaggaggttgagaactgcctgtgagagg |
13333643 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
| ||| |||| |||||| || | ||||||||||||||||| |||||| |||||||| |||||| |||||||||||||| || ||||||||||| |||| |
|
|
| T |
13333644 |
gaaaaaaggatactctccttttcttttgtcaccactgttgaagtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttg |
13333743 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagat |
389 |
Q |
| |
|
||||||||||||| ||| |||||| |||||||||| | | |||| | |||||||| || ||||||||||| |
|
|
| T |
13333744 |
aggaaattaatatagactttttcatcgagtgtatgaatattgttgacagttgtctcagggattcaaagat |
13333813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 372
Target Start/End: Complemental strand, 3147442 - 3147092
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| | |||| ||| |||| | |||||| |||| || |||| || |||||||||||||| || ||||||||||||||||| || | |
|
|
| T |
3147442 |
acttttgatgtgtctcttcttacaattaaggataaggtctttcaagttaaggccatcgcaggaaacacccaccttgggggagaggactttgataatagga |
3147343 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
||||||||||||||| | |||||| || |||||||| || || ||||||||| ||||| ||| | ||||| ||||||||| ||| || || || || || |
|
|
| T |
3147342 |
tggtgaactactttgcacgggagtttaagaagaagaacaaggtagacattagtgagaactcaagagccttaaggaggttgaaaacggcgtgtgaaagagc |
3147243 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
||| | | ||| ||||| || | ||||||| ||||| |||||||||||||||||||| | ||||| | |||||| || |||||||||||||||||| |
|
|
| T |
3147242 |
aaaacgaatactatcttttgctgtcatcaccaccattgagatagattctttatttcagggatttgacttattttcatcaatcactcgtgccaagtttgag |
3147143 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgt |
372 |
Q |
| |
|
||||| |||||||| ||||||| |||||| |||||||||||||||||||| |
|
|
| T |
3147142 |
gaaatcaatatggatcttttcactgagtgtttggaaactgttaagagttgt |
3147092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 76 - 374
Target Start/End: Original strand, 27830919 - 27831217
Alignment:
| Q |
76 |
actgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagta |
175 |
Q |
| |
|
|||||||||||||| ||||| |||||||||||||||||||| || ||||||||||| ||||| |||| |||||| |||||||| | |||||||||||| |
|
|
| T |
27830919 |
actgctggaaacactcaccttggtggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattagtg |
27831018 |
T |
|
| Q |
176 |
agaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatt |
275 |
Q |
| |
|
|||| ||| | |||| ||||| ||||||| || |||| |||||| |||||||||||||| | ||| ||| ||| ||||| ||||| | ||||| |
|
|
| T |
27831019 |
ggaacccaagagccttgaggaggctgagaacctaatgtgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatt |
27831118 |
T |
|
| Q |
276 |
tcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtct |
374 |
Q |
| |
|
| |||| || ||||| | |||| || |||||||| |||||||||||||| ||||||||||||||||| || |||||||| |||||| |||||||||| |
|
|
| T |
27831119 |
tgagggcattgacttcttttcaatgatcactcgtgcaaagtttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtct |
27831217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 22 - 390
Target Start/End: Complemental strand, 8647055 - 8646687
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| |||||| ||| |||| | |||||| | || |||||||| ||||||||||| ||||| || |||||||||||||||| |||| |
|
|
| T |
8647055 |
acttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctggaaacactcacctcggaggagaggactttgatagtagaa |
8646956 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
||||| || |||||| | | || || || |||||||| || |||||||||| | ||| ||| | ||||| ||||||||||||| || |||||||| || |
|
|
| T |
8646955 |
tggtggaccactttgcacaagaatttaacaagaagaacaaggtggacattactggaaactcaagagccttaaggaggttgagaacggcatgcgagagagc |
8646856 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
||| |||||||| ||||| || | | |||||| |||| |||||||||||||| | || || |||||| |||||| || ||||||||||| ||||| |
|
|
| T |
8646855 |
aaaaaggacactatcttttgcttcttgcaccaccattgaattagattctttatttaatggcattgactttatttcatcaatcactcgtgccaaatttgac |
8646756 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatg |
390 |
Q |
| |
|
| ||| |||||||| || |||| ||| ||| ||||||||||| ||||||||| || |||| | |||||| |
|
|
| T |
8646755 |
gcaatcaatatggatctgttcatcgaatgtttggaaactgttgagagttgtcataatgatgccaagatg |
8646687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 389
Target Start/End: Original strand, 8585696 - 8586063
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| |||| | ||| || |||| |||||||||||| ||||| || |||||||| || ||||| || |||| ||||||||||||||||| |
|
|
| T |
8585696 |
acttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcaaccgctggaaatactcaccttgggggaggggactttgataacagaa |
8585795 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
|| ||||||||||||| ||||| || || | ||||| |||||||| |||| ||||||| ||| | | || || |||| ||||| || || || | ||| |
|
|
| T |
8585796 |
tgttgaactactttgttgaggaatttaagagaaagaacaatgtggatattactaagaacccaagagctttgaggcggttaagaacggcatgtgaaaaggc |
8585895 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
||| |||||||| |||||| || ||||| ||| |||| | |||| ||||| | |||| | || || |||||||| || || |||| |||||||||| |
|
|
| T |
8585896 |
aaaaaggacactttctttcaaattggtcactactattgaaattgattatttatgtgagggcgtcgatttctcttcatcaatcacgcgtgtcaagtttgag |
8585995 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagat |
389 |
Q |
| |
|
||||| |||||||||||||| || |||||||| | |||||| |||||||||||| ||||| ||||| |
|
|
| T |
8585996 |
gaaatcaatatggacctttttaatgagtgtataaatactgttgagagttgtcttaccgattctaagat |
8586063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 381
Target Start/End: Complemental strand, 17260419 - 17260060
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| || ||| ||| |||| | ||||| ||||| || ||||| | |||| |||| || || || || |||||||||||||| |||| |
|
|
| T |
17260419 |
acttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataatagaa |
17260320 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
||||| |||| |||||||||||| |||||| | ||| || ||||||||| | |||| ||||| ||||| |||||||||||||||| || || | || |
|
|
| T |
17260319 |
tggtgtactattttgtagaggagatcaaaagaacgaaaaaattggacattattgggaacccaaaagccttaaggaggttgagaactgcatgtgaaaaagc |
17260220 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
||| |||||||| ||||| |||| ||| |||| |||||||||||| |||||||| |||| | | |||||||| || || ||||||||||||||||| |
|
|
| T |
17260219 |
aaaaaggacactttcttttgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttaatttttcttcgtcaatcactcgtgccaagtttgaa |
17260120 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgat |
381 |
Q |
| |
|
||||| |||||||||||||| | ||||| ||||| | |||| ||| |||||||||||| |
|
|
| T |
17260119 |
gaaatcaatatggaccttttttatgagtgcatggagattgttgagaagtgtcttagtgat |
17260060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 81 - 375
Target Start/End: Complemental strand, 6789631 - 6789337
Alignment:
| Q |
81 |
tggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaac |
180 |
Q |
| |
|
||||||||| ||||| || |||||||||||||||||| || |||| |||||||||| ||||||||| || | |||||| || ||||| |||| | ||| |
|
|
| T |
6789631 |
tggaaacactcacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaac |
6789532 |
T |
|
| Q |
181 |
gcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagg |
280 |
Q |
| |
|
||| ||||| | |||||||||||||| || || ||||| || ||| ||||||||| | | ||||| ||| |||||||||| ||||||||||||| |
|
|
| T |
6789531 |
tcaagggccttaagaaggttgagaactgcgtgtgaaagggccaaaagggtactctcttttgttgtcgtcactactattgaggtagactctttatttcagg |
6789432 |
T |
|
| Q |
281 |
gaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtctt |
375 |
Q |
| |
|
| || ||||| |||||| ||||||| ||||||||||||||||| |||||||| |||| || ||||||||| | || ||| ||||||||||| |
|
|
| T |
6789431 |
gcatcgacttcatttcatcacttactcgggccaagtttgaggaaatcaatatggatatttttaatgagtgtatgaagaccgttgagagttgtctt |
6789337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 58 - 375
Target Start/End: Complemental strand, 8545775 - 8545458
Alignment:
| Q |
58 |
gtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaaga |
157 |
Q |
| |
|
|||||||| || || |||||||||||| |||| ||||||| || || ||||||||||||||||||||||| |||||||| |||||||||| | ||||| |
|
|
| T |
8545775 |
gtctttgatgtcaaggccactgctggagacacttacctaggcggtgaagactttgataacagaatggtgaattactttgtgaaggagttcaagaggaaga |
8545676 |
T |
|
| Q |
158 |
ataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgt |
257 |
Q |
| |
|
| |||| ||| |||||| |||| || || |||| ||||||||||||||||||| |||| |||||| |||||||| || | || | || |||| | |
|
|
| T |
8545675 |
acaatgaggatattagtcggaacccagaagccttgaggaggttgagaactgcctgtgagaaggcaaaaaggacactttcatacgacactgaggccacaat |
8545576 |
T |
|
| Q |
258 |
tgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaa |
357 |
Q |
| |
|
||| ||||| |||||| ||| || || ||||||| ||||| || ||||| |||||||||||| || | ||||||||||| || | |||||||||| |
|
|
| T |
8545575 |
tgacctagatgctttatatcaaggtattgacttttgttcatgcatcactcgggccaagtttgagcaattgaatatggacctctttgaaaagtgtatggac |
8545476 |
T |
|
| Q |
358 |
actgttaagagttgtctt |
375 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
8545475 |
actgttaattgttgtctt |
8545458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 22 - 381
Target Start/End: Complemental strand, 17268117 - 17267758
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| || ||| ||| |||| | ||||| ||||| || ||||| | |||| |||| || || || || |||||||||||||| |||| |
|
|
| T |
17268117 |
acttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactcatcttgggggtgaggactttgataatagaa |
17268018 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
|||| |||| ||||| ||||| |||||| ||| || || || | ||| | |||| ||||| || | |||||||||||||||| || || | || |
|
|
| T |
17268017 |
tggtatactattttgttgaggaaatcaaaaggaaaaaaaaattgaaaattgttgggaacccaaaagccatgaggaggttgagaactgcatgtgaaaaagc |
17267918 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
||| |||||||| |||||||||| ||| |||| |||||||||||| |||||||| |||| | || |||||||| || || |||||||||||||||||| |
|
|
| T |
17267917 |
aaaaaggacactttctttcgcctctgtgaccaatgttgaggtagacgctttatttaagggtgttgatttttcttcgtcaatcactcgtgccaagtttgag |
17267818 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgat |
381 |
Q |
| |
|
||||| |||||||||||||| | ||||| ||||| | |||| ||| |||||||||||| |
|
|
| T |
17267817 |
gaaatcaatatggacctttttgatgagtgcatggagattgttgagaagtgtcttagtgat |
17267758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 8628710 - 8628609
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| |||| | ||| || |||| |||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
8628710 |
acttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccactgctggaaatactcaccttggtggagaggactttgataacagaa |
8628611 |
T |
|
| Q |
122 |
tg |
123 |
Q |
| |
|
|| |
|
|
| T |
8628610 |
tg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 233
Target Start/End: Original strand, 29577701 - 29577873
Alignment:
| Q |
61 |
tttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaata |
160 |
Q |
| |
|
||||||||||| ||||||||||| | || |||||||| ||||||||||| ||||| | |||||||| | ||||||| | ||||| || | |||||| | |
|
|
| T |
29577701 |
tttgaagtaaaggccactgctggtgatactcacctaggaggagaggacttcgataataaaatggtgagccactttgtgaatgagttgaagaggaagaaca |
29577800 |
T |
|
| Q |
161 |
atgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
233 |
Q |
| |
|
|||||||||||||| |||| ||||| | ||| ||| | |||||||||| || ||||||||||||||| |||| |
|
|
| T |
29577801 |
atgtggacattagtttgaacccaaaagctttaaggaagctgagaactgcttgtgagagggcaaagagggcact |
29577873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 233
Target Start/End: Original strand, 29581870 - 29582042
Alignment:
| Q |
61 |
tttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaata |
160 |
Q |
| |
|
|||||||| || ||||||||||| | || |||||||| |||||||||||||||||| |||||||||| ||||||| | ||||| || | |||||| | |
|
|
| T |
29581870 |
tttgaagtgaaggccactgctggcgatactcacctaggaggagaggactttgataaccgaatggtgaattactttgcgaatgagttgaagaggaagaaca |
29581969 |
T |
|
| Q |
161 |
atgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
233 |
Q |
| |
|
|| ||||||||||| |||| ||||| | ||| ||| | ||||||| || || |||||||||||||||||||| |
|
|
| T |
29581970 |
atttggacattagtgggaacccaaaagctttaaggaagctgagaacagcttgtgagagggcaaagaggacact |
29582042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 31 - 173
Target Start/End: Original strand, 8636342 - 8636484
Alignment:
| Q |
31 |
gtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaact |
130 |
Q |
| |
|
|||||||| || ||||| || |||| ||||||||||| ||||||||||| ||| |||| ||||| || ||||||||||||||||||||||||||| | | |
|
|
| T |
8636342 |
gtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacacacaccttggaggagaggactttgataacagaatggtggaat |
8636441 |
T |
|
| Q |
131 |
actttgtagaggagttcaaaaagaagaataatgtggacattag |
173 |
Q |
| |
|
| ||||||||||| |||| | |||||| || || |||||||| |
|
|
| T |
8636442 |
attttgtagaggaaatcaagaggaagaacaaggtagacattag |
8636484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 63 - 375
Target Start/End: Complemental strand, 8570448 - 8570136
Alignment:
| Q |
63 |
tgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataat |
162 |
Q |
| |
|
|||||| || |||||||||||| |||| ||||| || || || || ||||||||||||||| ||| ||||||| || ||||||| |||||||| || |
|
|
| T |
8570448 |
tgaagtcaaggccactgctggagacactcacctgggaggtgaagattttgataacagaatgttgactcactttgtgaagaagttcaagaagaagaacaac |
8570349 |
T |
|
| Q |
163 |
gtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgagg |
262 |
Q |
| |
|
| ||| ||||||| |||| ||||| |||| ||||||| ||||| || || ||||||||||| |||||||| || | | || |||| ||||| |
|
|
| T |
8570348 |
gaggatattagtaggaacccaaaagccttgaggaggttaagaacagcttgtgagagggcaaaaaggacactttcatatgatactgaggccacaattgagc |
8570249 |
T |
|
| Q |
263 |
tagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgt |
362 |
Q |
| |
|
||||| || ||| | ||||||| ||||| |||||| || || || ||||||||||||||||| |||||| |||| || | |||||||||||||||| |
|
|
| T |
8570248 |
tagatgctatatataagggaattgacttcagttcatcaataacccgggccaagtttgaggaaatgaatatgaacctctttgaaaagtgtatggaaactgt |
8570149 |
T |
|
| Q |
363 |
taagagttgtctt |
375 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
8570148 |
taatagttgtctt |
8570136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 117 - 389
Target Start/End: Complemental strand, 8616764 - 8616492
Alignment:
| Q |
117 |
cagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgag |
216 |
Q |
| |
|
||||||| ||||||||||||| ||||| || || | |||||| |||||||| |||| || |||| ||| | | || || |||||| |||||| ||||| |
|
|
| T |
8616764 |
cagaatgttgaactactttgttgaggattttaagaggaagaacaatgtggatattactaggaacccaagatcgttgaggcggttgaaaactgcatgcgaa |
8616665 |
T |
|
| Q |
217 |
agggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagt |
316 |
Q |
| |
|
| ||| || ||| || || ||| || ||||| ||| ||||| | |||| ||||| | |||| || || || |||||||| || ||||||| |||| |
|
|
| T |
8616664 |
aaggcgaaacggatgctttcattcaaattggtcactactattgagattgattatttatgtgagggcatcgatttctcttcatcaatcactcgtgttaagt |
8616565 |
T |
|
| Q |
317 |
ttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagat |
389 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||| | |||||| |||||||| ||| |||||| ||||| |
|
|
| T |
8616564 |
ttgaggaaatcaatatggacctttttaacgagtgtataaagactgttgagagttgttttaatgattctaagat |
8616492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 390
Target Start/End: Original strand, 8673894 - 8673979
Alignment:
| Q |
305 |
ctcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatg |
390 |
Q |
| |
|
|||||||||||||||||||||| ||||| | ||||||||||||||| ||||||||||| ||| |||||||| |||| | |||||| |
|
|
| T |
8673894 |
ctcgtgccaagtttgaggaaatcaatatcaatcttttcaacgagtgtttggaaactgttgagaattgtcttattgatgccaagatg |
8673979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 8590816 - 8590713
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| | || | | |||| |||| | |||||| |||||||||||| | ||| | ||||||||||| |||||||||||||||||||||| |
|
|
| T |
8590816 |
acttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggaggagaggactttgataacagaa |
8590717 |
T |
|
| Q |
122 |
tggt |
125 |
Q |
| |
|
|||| |
|
|
| T |
8590716 |
tggt |
8590713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 244 - 376
Target Start/End: Complemental strand, 8664289 - 8664159
Alignment:
| Q |
244 |
tttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttca |
343 |
Q |
| |
|
|||||||||||| || ||||||||||||| |||||| | || |||| | || ||| | |||||||||||| ||| ||||| |||||||| ||||||| |
|
|
| T |
8664289 |
tttgtcaccactattaaggtagattctttgtttcagcgcttaaacttctttttatccttcgctcgtgccaagtatgatgaaatcaatatggatcttttca |
8664190 |
T |
|
| Q |
344 |
acgagtgtatggaaactgttaagagttgtctta |
376 |
Q |
| |
|
|| |||| ||||||||||| |||||||||||| |
|
|
| T |
8664189 |
ac--gtgtttggaaactgttgagagttgtctta |
8664159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 233
Target Start/End: Original strand, 8382866 - 8383077
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| |||| | ||| ||| | |||||||| || || |||||||| ||| |||| || ||||| || || ||||| |||||||||| |
|
|
| T |
8382866 |
acttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacactcatctaggaggtgaagacttagataacagaa |
8382965 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaa-acccttatggaggttgagaactgcctgcgagaggg |
220 |
Q |
| |
|
| ||||| |||||||| || |||||||| | |||| ||||| |||||||||| |||| |||| | |||| | ||||| ||||| || |||||||||| |
|
|
| T |
8382966 |
tcgtgaagtactttgttgacgagttcaagaggaagcataataaggacattagtgggaacccaaaggctctta-gaaggttaagaacggcttgcgagaggg |
8383064 |
T |
|
| Q |
221 |
caaagaggacact |
233 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
8383065 |
caaaaaggacact |
8383077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 233
Target Start/End: Complemental strand, 8576469 - 8576293
Alignment:
| Q |
57 |
tgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
156 |
Q |
| |
|
|||||| ||||| || |||||||| ||| |||| |||||||| || | ||||||||||||| ||||||| | ||||||| ||||||||| || ||| |
|
|
| T |
8576469 |
tgtcttcgaagtcaaggccactgccggagacactcacctaggaggccaagactttgataacataatggtggatcactttgttaaggagttcaggaacaag |
8576370 |
T |
|
| Q |
157 |
aataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
233 |
Q |
| |
|
| || | ||| |||||| |||| ||||| ||||| |||||||||||||||| || || | |||||| |||||||| |
|
|
| T |
8576369 |
tacaaagaggatattagtgagaattcaaaagccttaaggaggttgagaactgcttgtgaaaaggcaaaaaggacact |
8576293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 7877761 - 7877872
Alignment:
| Q |
60 |
ctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaat |
159 |
Q |
| |
|
|||||| |||| ||| ||||| ||| | || ||||||||||||||||||||||||||||||||| ||||| | || || |||||| || | ||||||| |
|
|
| T |
7877761 |
ctttgatgtaatagctactgccggagatactcacctaggtggagaggactttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaat |
7877860 |
T |
|
| Q |
160 |
aatgtggacatt |
171 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
7877861 |
aaagtggacatt |
7877872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 138
Target Start/End: Complemental strand, 8559474 - 8559395
Alignment:
| Q |
59 |
tctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgta |
138 |
Q |
| |
|
|||||||||| || |||||| | ||| |||| ||||| || ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
8559474 |
tctttgaagtcaaggccacttccggagacacacacctcggaggagaggactttgataacagaatggtgaaacactttgta |
8559395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 8602115 - 8602037
Alignment:
| Q |
59 |
tctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
137 |
Q |
| |
|
|||||||||| || |||||| | ||| |||| ||||| || |||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
8602115 |
tctttgaagtcaaggccacttccggagacacacaccttggaggagaggactttgataaccgaatggtgaaccactttgt |
8602037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 8610041 - 8609961
Alignment:
| Q |
76 |
actgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
156 |
Q |
| |
|
||||||||| | || ||||| || ||||||||||||||| |||||||||| || ||||||| |||||||||||| |||| |
|
|
| T |
8610041 |
actgctggagatactcaccttggaggagaggactttgatcacagaatggttaatcactttgtgaaggagttcaaaaggaag |
8609961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 8581837 - 8581763
Alignment:
| Q |
63 |
tgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
137 |
Q |
| |
|
|||||| || |||||||||||| |||| ||||| || || || || |||||||||||||||||||| ||||||| |
|
|
| T |
8581837 |
tgaagtcaaggccactgctggagacactcacctgggaggggaagattttgataacagaatggtgaatcactttgt |
8581763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 39985787 - 39985709
Alignment:
| Q |
59 |
tctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgt |
137 |
Q |
| |
|
||||||| || |||||||| || ||| ||||||| || || || ||||| ||||| ||||||||||||||| ||||||| |
|
|
| T |
39985787 |
tctttgaggtgaaagccacagccggagacacccatcttggaggtgaggattttgacaacagaatggtgaaccactttgt |
39985709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 294 - 390
Target Start/End: Complemental strand, 8537942 - 8537846
Alignment:
| Q |
294 |
ttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatg |
390 |
Q |
| |
|
|||||| || ||||| |||||||||||| || | || |||||||| || | |||||||| ||||||||||||||||| ||| |||| | |||||| |
|
|
| T |
8537942 |
ttcatcaatcactcgggccaagtttgagcaactcaacatggacctctttgaaaagtgtatgaaaactgttaagagttgttttaatgatgctaagatg |
8537846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 341
Target Start/End: Complemental strand, 8664971 - 8664919
Alignment:
| Q |
289 |
ttttcttcatctattactcgtgccaagtttgaggaaattaatatggacctttt |
341 |
Q |
| |
|
|||| |||||| || |||||||| | |||||||||||| |||||||||||||| |
|
|
| T |
8664971 |
ttttgttcatcaataactcgtgcgaggtttgaggaaatcaatatggacctttt |
8664919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 20 - 391
Target Start/End: Original strand, 16657505 - 16657876
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||| ||| ||||| |||||||||||||| |||||||| ||||| || |||||||||||||||||||| |
|
|
| T |
16657505 |
gtacttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagccactgccggaaacactcaccttgggggagaggactttgataacag |
16657604 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
|| |||||||||||||||||||||||| ||||||||||||| |||||||| ||| |||| ||| | |||| |||||||||||||||| || |||||| |
|
|
| T |
16657605 |
aacggtgaactactttgtagaggagtttcaaaagaagaataaggtggacataagtgggaactcaagagccttgaggaggttgagaactgcatgtgagagg |
16657704 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||| |
|
|
| T |
16657705 |
gcaaagaggacactctcttttgcttttgtcaccactgttgaggtagattctttatttcagggaattgacttttcttcatcaatcacccgtgccaagtttg |
16657804 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatgc |
391 |
Q |
| |
|
|||||||||||||||| |||||||| ||||||||| |||||||| ||| ||||||| ||||||||||||||| |
|
|
| T |
16657805 |
aggaaattaatatggatcttttcaatgagtgtatgaaaactgttgagaattgtcttcgtgattcaaagatgc |
16657876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 70 - 381
Target Start/End: Complemental strand, 43625542 - 43625231
Alignment:
| Q |
70 |
aaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggaca |
169 |
Q |
| |
|
|||||||||||||||||||| ||||| || ||||||||||||||| | ||||||||||||||||||| ||| || || | |||||||| |||||||| | |
|
|
| T |
43625542 |
aaagccactgctggaaacactcaccttggaggagaggactttgatgatagaatggtgaactactttgcagaagaatttgagaagaagaacaatgtggata |
43625443 |
T |
|
| Q |
170 |
ttagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattc |
269 |
Q |
| |
|
||| | ||| ||| | || || | ||||||||||| || |||||||| | ||| |||||||| ||||| || | ||| |||| ||||||||||||| |
|
|
| T |
43625442 |
ttattggaaactcaagagccataagaaggttgagaacggcatgcgagagaggaaaaaggacactgtcttttgcttcgttcagcactattgaggtagattc |
43625343 |
T |
|
| Q |
270 |
tttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagt |
369 |
Q |
| |
|
|||||| | || || ||||| | |||||| || ||||||||||| ||||| ||||| |||||||| ||||||||||||||| || |||||||||||||| |
|
|
| T |
43625342 |
tttattccgtggtattgacttcttttcatcaatcactcgtgccaaatttgatgaaataaatatggatcttttcaacgagtgtttgaaaactgttaagagt |
43625243 |
T |
|
| Q |
370 |
tgtcttagtgat |
381 |
Q |
| |
|
||||||| |||| |
|
|
| T |
43625242 |
tgtcttattgat |
43625231 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 73 - 354
Target Start/End: Complemental strand, 7542353 - 7542072
Alignment:
| Q |
73 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
172 |
Q |
| |
|
||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||| ||||||||||||| | |||||||| | ||||| || |||||||||| |
|
|
| T |
7542353 |
gccactgctggcaacactcaccttggtggagaagactttgataatagaatggcgaactactttgtacaagagttcaagagaaagaacaaagtggacatta |
7542254 |
T |
|
| Q |
173 |
gtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
272 |
Q |
| |
|
|| ||| ||||| |||| |||||||||||||||| || ||||||||||| || |||| |||||| |||| ||||| |||||||||||||||| |
|
|
| T |
7542253 |
gtgggaatccaaaagccttgaggaggttgagaactgcttgtgagagggcaaaaagatcactttctttccttgttgttgccactattgaggtagattcttt |
7542154 |
T |
|
| Q |
273 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatg |
354 |
Q |
| |
|
|||||| || || |||||||||||||| || | | | |||||||||||||| || |||||||| ||||| |||||||||||| |
|
|
| T |
7542153 |
atttcaaggcattgacttttcttcatcgatcaatagggccaagtttgaggagatgaatatggatctttttaacgagtgtatg |
7542072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 390
Target Start/End: Complemental strand, 14703532 - 14703218
Alignment:
| Q |
76 |
actgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagta |
175 |
Q |
| |
|
|||||||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||| | |||||||| | || || | ||||||||||| |
|
|
| T |
14703532 |
actgctggaaacactcacctcgggggagaggacttcgataacagaatggtgaactactttgttcaagagttcaagagaaaaaacagattggacattagtg |
14703433 |
T |
|
| Q |
176 |
agaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatt |
275 |
Q |
| |
|
|| ||||| ||||| |||| |||||||| || |||||||||||||| || ||||| |||||| ||||| ||||| ||||||||||| ||||||| |
|
|
| T |
14703432 |
gaaatccaaaagccttaaggagcttgagaaccgcttgcgagagggcaaaaagaacactttctttccaagttgtcgccactattgaggtagatgctttatt |
14703333 |
T |
|
| Q |
276 |
tcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtctt |
375 |
Q |
| |
|
||| | || |||||||||||||| || | | | ||||||||||| ||||| ||||||||| |||| || |||||| || | | |||| ||||||||||| |
|
|
| T |
14703332 |
tcaatgcattgacttttcttcatcgatcaatagggccaagtttgaagaaatgaatatggacttttttaatgagtgtgtgaagattgttgagagttgtctt |
14703233 |
T |
|
| Q |
376 |
agtgattcaaagatg |
390 |
Q |
| |
|
| |||| | |||||| |
|
|
| T |
14703232 |
attgatgctaagatg |
14703218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 22 - 390
Target Start/End: Original strand, 16661982 - 16662350
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| |||| | ||| || |||| |||||||||||| ||||||||| |||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
16661982 |
acttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagccacttctggaaacactcacctcgggggagaggactttgataacagaa |
16662081 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
|| ||||||||||||| | || || || | |||||| || ||||| || | || ||| ||| | |||| |||||||||||||| | || || | ||| |
|
|
| T |
16662082 |
tgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactaggaatccaagagccttgaggaggttgagaacttcttgtgaaaaggc |
16662181 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
|| ||||||||||||||| || |||||| || ||||| | |||| ||||| ||| || ||||| ||| |||| | ||||||| ||||||||| |
|
|
| T |
16662182 |
gaaaaggacactctctttcaaattggtcaccgctattgagattgattatttatacgaggacattgacttctctacatcactcactcgtgtcaagtttgaa |
16662281 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatg |
390 |
Q |
| |
|
||||| ||||||| |||||| |||||||||||| | | |||| |||||||| || |||||||||||| |
|
|
| T |
16662282 |
gaaatcaatatgggcctttttaacgagtgtatgaagattgttgagagttgttttgtggattcaaagatg |
16662350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 390
Target Start/End: Complemental strand, 12234867 - 12234499
Alignment:
| Q |
22 |
acttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaa |
121 |
Q |
| |
|
||||||||||||||| |||| | |||||| ||| |||||| |||| |||||||| || |||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
12234867 |
acttttgatgtgtctctcctaacaatcaaaggtaatgtcttccaagttaaagccacagccggaaacactcacctcgggggagaggactttgataacagaa |
12234768 |
T |
|
| Q |
122 |
tggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggc |
221 |
Q |
| |
|
|||| |||||| ||| | |||||||| | ||||| || |||||||| ||| || ||||| |||| ||||||| |||||||| || |||||||| |
|
|
| T |
12234767 |
tggtaaactaccttgctcaagagttcaatagaaagaaaaaagtggacatgagtggaaatccaaaagccttgaggaggttaagaactgcttgtgagagggc |
12234668 |
T |
|
| Q |
222 |
aaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgag |
321 |
Q |
| |
|
||| || || | |||||| |||| | || |||||||||||||||||||| | || || || ||||||||||| || | | | |||||||||||| |
|
|
| T |
12234667 |
aaaaagatcattgtctttccttgttgttgcaaccattgaggtagattctttatttgaaggcattgatttttcttcatcgatcaatagggccaagtttgag |
12234568 |
T |
|
| Q |
322 |
gaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatg |
390 |
Q |
| |
|
||||| |||||||| ||| | | ||||||||| | | |||| ||||||||||||||||| | |||||| |
|
|
| T |
12234567 |
gaaatgaatatggatcttcttattgagtgtatgaagattgttgagagttgtcttagtgatgctaagatg |
12234499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 324
Target Start/End: Original strand, 12245447 - 12245698
Alignment:
| Q |
73 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
172 |
Q |
| |
|
||||||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||||||| | |||||||||| | ||||| || |||| |||| |
|
|
| T |
12245447 |
gccactgctggaaacactcaccttggaggagaggattttgataatagaatggtaaactactttgcacaggagttcaagagaaagaacaaattggatatta |
12245546 |
T |
|
| Q |
173 |
gtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
272 |
Q |
| |
|
|| | ||||| |||| |||| ||||||||||| || ||||||||||| || | ||| || || |||| | ||| |||||||||||||||| |
|
|
| T |
12245547 |
gtgcaagttcaaaagccttgaggagattgagaactgcttgtgagagggcaaaaagaatactttcgtttcttgttgttgcaactattgaggtagattcttt |
12245646 |
T |
|
| Q |
273 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaa |
324 |
Q |
| |
|
|||||| || || || ||||||||||| || | ||| || |||||||||||| |
|
|
| T |
12245647 |
atttcaaggcattgatttttcttcatccatcaatcgggcaaagtttgaggaa |
12245698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 12258606 - 12258698
Alignment:
| Q |
57 |
tgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaa |
149 |
Q |
| |
|
||||||| |||| || || || ||||||||||| ||||| || ||||||||||||||||| |||||||||| ||||||||||| |||||||| |
|
|
| T |
12258606 |
tgtctttcaagttaaggctacagctggaaacacgcaccttggaggagaggactttgataatagaatggtgagttactttgtagaagagttcaa |
12258698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 376
Target Start/End: Original strand, 12258806 - 12258925
Alignment:
| Q |
257 |
ttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatgga |
356 |
Q |
| |
|
||||| |||||||||||| | | || || || |||||| |||| || | ||||||||||||||||||||| ||| |||| |||||||| || || ||| | |
|
|
| T |
12258806 |
ttgagatagattctttatgtgatggcattgatttttctgcatcaatcaatcgtgccaagtttgaggaaataaatttggaacttttcaatgaatgcatgaa |
12258905 |
T |
|
| Q |
357 |
aactgttaagagttgtctta |
376 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
12258906 |
gactgttgagagttgtctta |
12258925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 11999350 - 11999283
Alignment:
| Q |
257 |
ttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaa |
324 |
Q |
| |
|
|||||||||||||||||||||| || || || ||||||||||| || | ||| || |||||||||||| |
|
|
| T |
11999350 |
ttgaggtagattctttatttcaaggcattgatttttcttcatccatcaatcgggcaaagtttgaggaa |
11999283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 163; Significance: 6e-87; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 20 - 354
Target Start/End: Original strand, 9335879 - 9336213
Alignment:
| Q |
20 |
gtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacag |
119 |
Q |
| |
|
|||||||||||||||||||||| | ||| ||||||| | | ||||||||||||||||| || |||||||| ||||| || || ||||||||||||||||| |
|
|
| T |
9335879 |
gtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagccaccgcaggaaacacgcaccttggaggcgaggactttgataacag |
9335978 |
T |
|
| Q |
120 |
aatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagg |
219 |
Q |
| |
|
|||||| ||||| ||||| || ||||| |||||||||||||| |||||||| | ||||| ||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
9335979 |
aatggttaactattttgtggaagagttaaaaaagaagaataaagtggacatcaagcagaacccaaaatccttaaggaggttgagaactgcctgtgagagg |
9336078 |
T |
|
| Q |
220 |
gcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttg |
319 |
Q |
| |
|
||||| |||| ||| ||||| || ||||| |||||||||||||||||| |||||||| |||||| |||||||||||||| || ||||||||||| |||| |
|
|
| T |
9336079 |
gcaaaaaggatactgtcttttgcttttgttaccactgttgaggtagatgctttatttatgggaatcgacttttcttcatcaatcactcgtgccaaatttg |
9336178 |
T |
|
| Q |
320 |
aggaaattaatatggaccttttcaacgagtgtatg |
354 |
Q |
| |
|
||||| |||| |||||| ||||||| ||||||||| |
|
|
| T |
9336179 |
aggaacttaacatggactttttcaatgagtgtatg |
9336213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 61 - 387
Target Start/End: Complemental strand, 30775391 - 30775065
Alignment:
| Q |
61 |
tttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaata |
160 |
Q |
| |
|
|||||||| ||||| |||||||||||||| ||| | || |||||||||||||||||||||||| |||| |||||||||||||| || || | |||||| | |
|
|
| T |
30775391 |
tttgaagttaaagcaactgctggaaacactcacatcgggggagaggactttgataacagaatgttgaattactttgtagaggaatttaagacgaagaaca |
30775292 |
T |
|
| Q |
161 |
atgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttga |
260 |
Q |
| |
|
| |||||||||| ||| ||| | | || | |||||||||||| || || | |||||| ||||||||||| ||| ||| |||| |||||| |
|
|
| T |
30775291 |
acgtggacattaccgggaatccaagagctttgagacagttgagaactgcatgtgaaaaggcaaaaaggacactctccttcaagtttctcacatttgttga |
30775192 |
T |
|
| Q |
261 |
ggtagattctttatttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaact |
360 |
Q |
| |
|
| ||||| ||||||||| | || |||||||||||||| || ||||||| ||||||||||||||| |||||||||||||| || |||||||| | ||| |
|
|
| T |
30775191 |
gatagataatttatttcaagacattgacttttcttcatcaatcactcgtgtcaagtttgaggaaatcaatatggacctttttaatgagtgtatacagact |
30775092 |
T |
|
| Q |
361 |
gttaagagttgtcttagtgattcaaag |
387 |
Q |
| |
|
||| |||||||||||| |||||||||| |
|
|
| T |
30775091 |
gttgagagttgtcttactgattcaaag |
30775065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 73 - 354
Target Start/End: Complemental strand, 35132575 - 35132303
Alignment:
| Q |
73 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
172 |
Q |
| |
|
|||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||| || || ||||||| |
|
|
| T |
35132575 |
gccactgccggaaacactcatctcggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacatta |
35132476 |
T |
|
| Q |
173 |
gtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
272 |
Q |
| |
|
|| ||| ||||| || ||||||||||||||| ||||||||||||| |||| |||||| |||| ||| | |||| ||||||||||| |
|
|
| T |
35132475 |
gtgggaattcaaaagcc---------ttgagaactgcctgctagagggcaaagagatcactttctttccttgttgttgccaatattgaagtagattcttt |
35132385 |
T |
|
| Q |
273 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatg |
354 |
Q |
| |
|
|||||| || || || ||||||||||| || | ||| ||||||||||||||||| ||| |||||||| || ||||||||| |
|
|
| T |
35132384 |
atttcaaggcattgatttttcttcatcaatcaatcgcgccaagtttgaggaaatgaatgcagacctttttaatgagtgtatg |
35132303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 73 - 374
Target Start/End: Complemental strand, 28220045 - 28219744
Alignment:
| Q |
73 |
gccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacatta |
172 |
Q |
| |
|
||||| ||||||||||| ||||| || |||||||||||||||| || |||||||||||||| | ||||||||| || |||||||| || |||||||||| |
|
|
| T |
28220045 |
gccaccgctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacatta |
28219946 |
T |
|
| Q |
173 |
gtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattcttt |
272 |
Q |
| |
|
| ||| ||| | ||||| ||||||||||||| || ||| |||| ||||| |||||||| ||||| || ||||| |||| |||||||||||||||| |
|
|
| T |
28219945 |
ctggaaactcaagagccttaaggaggttgagaacagcgtgcaagagagcaaaaaggacactatcttttgctgttgtcgccaccattgaggtagattcttt |
28219846 |
T |
|
| Q |
273 |
atttcagggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgt |
372 |
Q |
| |
|
|||| | || || || || | |||||| ||||||||||| |||||||||||||| |||||||| |||||||| |||||| || |||||||| |||| ||| |
|
|
| T |
28219845 |
atttgaaggcattgatttcttttcatcaattactcgtgctaagtttgaggaaatcaatatggatcttttcaatgagtgtttgaaaactgttgagaggtgt |
28219746 |
T |
|
| Q |
373 |
ct |
374 |
Q |
| |
|
|| |
|
|
| T |
28219745 |
ct |
28219744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 80 - 390
Target Start/End: Complemental strand, 43744936 - 43744626
Alignment:
| Q |
80 |
ctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaagaa |
179 |
Q |
| |
|
|||||||||| ||||| || |||||||| |||||||| || |||||||||||||| | ||||||||| || |||||||| || |||||||||| | || |
|
|
| T |
43744936 |
ctggaaacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaa |
43744837 |
T |
|
| Q |
180 |
cgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttgaggtagattctttatttcag |
279 |
Q |
| |
|
| ||| | | ||| ||||||||||||| || ||||| || ||||| |||||| | ||||| || ||||||||||| |||||||||||||||||||| || |
|
|
| T |
43744836 |
cccaagagcattaaggaggttgagaacagcatgcgaaagagcaaaaaggacattatcttttgctgttgtcaccactattgaggtagattctttatttgag |
43744737 |
T |
|
| Q |
280 |
ggaatagacttttcttcatctattactcgtgccaagtttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtg |
379 |
Q |
| |
|
|| || || || | | || | || |||||| | |||||||||||||| |||||||| || |||||||||||| || ||| |||| |||||||||||| || |
|
|
| T |
43744736 |
ggcattgatttctttacaacaatcactcgtactaagtttgaggaaatcaatatggatctcttcaacgagtgtttgaaaattgttgagagttgtcttactg |
43744637 |
T |
|
| Q |
380 |
attcaaagatg |
390 |
Q |
| |
|
|| | |||||| |
|
|
| T |
43744636 |
atgccaagatg |
43744626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 233
Target Start/End: Complemental strand, 12528647 - 12528471
Alignment:
| Q |
57 |
tgtctttgaagtaaaagccactgctggaaacacccacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaag |
156 |
Q |
| |
|
|||||| ||||| || |||||||| ||| |||| ||||| || ||||||||||||||||| |||||||||| ||||||| | ||||| || | |||| |
|
|
| T |
12528647 |
tgtcttcgaagtcaaggccactgccggagacactcaccttggaggagaggactttgataatcgaatggtgaatcactttgtgaaagagtttaagaggaag |
12528548 |
T |
|
| Q |
157 |
aataatgtggacattagtaagaacgcaaaacccttatggaggttgagaactgcctgcgagagggcaaagaggacact |
233 |
Q |
| |
|
|| || || ||||||| | |||| ||||| || || |||| ||||||||| |||||||| ||| || |||||||| |
|
|
| T |
12528547 |
aacaaagttgacattattgggaactcaaaagccctaaggagattgagaactaactgcgagaaggcgaaaaggacact |
12528471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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