View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15860_high_13 (Length: 268)
Name: NF15860_high_13
Description: NF15860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15860_high_13 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 38634573 - 38634825
Alignment:
| Q |
16 |
catcagtcacaagacacttaataatttccacaatcaaactataaagtaatatatattacctctttgtcagagggggttgaggctttgatgtaccgaacca |
115 |
Q |
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| T |
38634573 |
catcagtcacaagacacttaataatttccacaatcaaactataaagtaatatatattacctctttgtcagagggggttgaggctttgatgtaccgaacca |
38634672 |
T |
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| Q |
116 |
gaaagacataaggagtaggaactgtcaaataccattcaagatttctcaagattgttttctccataaccagaacctgttctctaacatatgcattgtctga |
215 |
Q |
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| T |
38634673 |
gaaagacataaggagtaggaactgtcaaataccattcaagatttctcaagattgttttctccataaccagaacctgttctctaacatatgcattgtctga |
38634772 |
T |
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| Q |
216 |
tatgcatacaaaatcattgacctgtatacacaaatgaaacaaagacattcaat |
268 |
Q |
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| T |
38634773 |
tatgcatacaaaatcattgacctgtatacacaaatgaaacaaagacattcaat |
38634825 |
T |
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