View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15860_low_12 (Length: 292)

Name: NF15860_low_12
Description: NF15860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15860_low_12
NF15860_low_12
[»] chr6 (15 HSPs)
chr6 (119-281)||(27840146-27840308)
chr6 (12-65)||(27840039-27840092)
chr6 (20-63)||(12890817-12890860)
chr6 (20-63)||(28085618-28085661)
chr6 (20-63)||(30643011-30643054)
chr6 (23-63)||(9707012-9707052)
chr6 (23-63)||(33730207-33730247)
chr6 (23-63)||(34934830-34934870)
chr6 (20-63)||(4245869-4245912)
chr6 (20-63)||(5258145-5258188)
chr6 (20-58)||(1008049-1008087)
chr6 (22-63)||(12133901-12133942)
chr6 (20-64)||(451946-451990)
chr6 (20-60)||(34143762-34143802)
chr6 (20-60)||(34156378-34156418)
[»] chr3 (46 HSPs)
chr3 (22-63)||(46148270-46148311)
chr3 (20-63)||(311306-311349)
chr3 (20-63)||(5169074-5169117)
chr3 (20-63)||(12096702-12096745)
chr3 (20-63)||(48508477-48508520)
chr3 (20-63)||(48532200-48532243)
chr3 (20-63)||(53262383-53262426)
chr3 (21-63)||(52139042-52139084)
chr3 (22-63)||(31454224-31454265)
chr3 (20-61)||(35701093-35701134)
chr3 (22-63)||(37083291-37083332)
chr3 (22-63)||(39512785-39512826)
chr3 (21-62)||(48259947-48259988)
chr3 (20-60)||(2133609-2133649)
chr3 (23-63)||(31566161-31566201)
chr3 (20-63)||(22314-22357)
chr3 (20-63)||(237293-237336)
chr3 (20-63)||(7895877-7895920)
chr3 (23-62)||(15296150-15296189)
chr3 (23-62)||(27192466-27192505)
chr3 (20-63)||(40273202-40273245)
chr3 (20-59)||(45374474-45374513)
chr3 (20-63)||(45834597-45834640)
chr3 (20-63)||(47555329-47555372)
chr3 (20-63)||(49503565-49503608)
chr3 (20-63)||(52156081-52156124)
chr3 (20-63)||(52927845-52927888)
chr3 (20-63)||(53519822-53519865)
chr3 (25-63)||(659767-659805)
chr3 (21-63)||(23610930-23610972)
chr3 (22-60)||(54128624-54128662)
chr3 (26-63)||(41530003-41530040)
chr3 (26-63)||(49045077-49045114)
chr3 (22-59)||(53867981-53868018)
chr3 (23-63)||(14415260-14415300)
chr3 (23-63)||(24778609-24778649)
chr3 (17-61)||(29928288-29928332)
chr3 (17-61)||(29977442-29977486)
chr3 (23-59)||(40106620-40106656)
chr3 (23-63)||(43396082-43396122)
chr3 (21-57)||(43529294-43529330)
chr3 (23-63)||(47233596-47233636)
chr3 (23-63)||(49090633-49090673)
chr3 (20-60)||(50249622-50249662)
chr3 (27-63)||(52077473-52077509)
chr3 (23-63)||(52882662-52882702)
[»] chr7 (46 HSPs)
chr7 (20-63)||(43281916-43281959)
chr7 (20-63)||(2885719-2885762)
chr7 (20-63)||(11594202-11594245)
chr7 (20-63)||(12841272-12841315)
chr7 (20-63)||(14593994-14594037)
chr7 (20-63)||(16013517-16013560)
chr7 (20-63)||(28208325-28208368)
chr7 (20-63)||(29650626-29650669)
chr7 (20-63)||(31005447-31005490)
chr7 (20-63)||(31682599-31682642)
chr7 (20-63)||(32631806-32631849)
chr7 (20-63)||(38607234-38607277)
chr7 (20-63)||(39906369-39906412)
chr7 (20-63)||(40630676-40630719)
chr7 (20-63)||(43491550-43491593)
chr7 (20-63)||(44855171-44855214)
chr7 (21-63)||(37618187-37618229)
chr7 (15-61)||(43423983-43424029)
chr7 (22-63)||(1011288-1011329)
chr7 (22-63)||(21244282-21244323)
chr7 (22-63)||(27649022-27649063)
chr7 (22-63)||(31869101-31869142)
chr7 (22-63)||(47652789-47652830)
chr7 (23-63)||(40979928-40979968)
chr7 (20-63)||(6375110-6375153)
chr7 (20-63)||(12966258-12966301)
chr7 (20-63)||(20899413-20899456)
chr7 (20-63)||(28708623-28708666)
chr7 (24-63)||(34745989-34746028)
chr7 (20-59)||(36101774-36101813)
chr7 (20-63)||(36869234-36869277)
chr7 (20-63)||(42187683-42187726)
chr7 (20-63)||(45836479-45836522)
chr7 (20-59)||(47413712-47413751)
chr7 (25-63)||(6263501-6263539)
chr7 (21-59)||(28355412-28355450)
chr7 (25-63)||(31681022-31681060)
chr7 (22-63)||(1531372-1531413)
chr7 (22-63)||(7273342-7273383)
chr7 (22-59)||(33650869-33650906)
chr7 (20-57)||(35725568-35725605)
chr7 (23-64)||(35734691-35734732)
chr7 (20-60)||(5418319-5418359)
chr7 (20-60)||(22349865-22349905)
chr7 (20-56)||(38900205-38900241)
chr7 (23-63)||(41157897-41157937)
[»] chr2 (40 HSPs)
chr2 (20-63)||(451645-451688)
chr2 (20-65)||(38429649-38429694)
chr2 (19-63)||(4807837-4807881)
chr2 (19-63)||(9531596-9531640)
chr2 (19-63)||(26566297-26566341)
chr2 (20-63)||(227431-227474)
chr2 (20-63)||(3635320-3635363)
chr2 (20-63)||(9496108-9496151)
chr2 (20-63)||(12489799-12489842)
chr2 (20-63)||(17670710-17670753)
chr2 (20-63)||(25834920-25834963)
chr2 (20-63)||(30306274-30306317)
chr2 (20-63)||(35643190-35643233)
chr2 (20-63)||(38328367-38328410)
chr2 (20-63)||(43573127-43573170)
chr2 (20-63)||(44437718-44437761)
chr2 (21-63)||(10403891-10403933)
chr2 (21-63)||(12520060-12520102)
chr2 (20-62)||(37520689-37520731)
chr2 (22-63)||(28508920-28508961)
chr2 (23-63)||(2073307-2073347)
chr2 (23-63)||(12474927-12474967)
chr2 (20-60)||(12734945-12734985)
chr2 (23-63)||(38452686-38452726)
chr2 (23-63)||(41763043-41763083)
chr2 (24-63)||(3243654-3243693)
chr2 (20-63)||(3866314-3866357)
chr2 (20-63)||(7326157-7326200)
chr2 (20-63)||(15775842-15775885)
chr2 (20-63)||(39029829-39029872)
chr2 (20-63)||(42543477-42543520)
chr2 (20-58)||(13188389-13188427)
chr2 (20-57)||(1648112-1648149)
chr2 (20-61)||(2610832-2610873)
chr2 (20-57)||(14444917-14444954)
chr2 (23-63)||(16521007-16521047)
chr2 (23-63)||(17429292-17429332)
chr2 (27-63)||(33504466-33504502)
chr2 (23-63)||(36183693-36183733)
chr2 (27-63)||(45482989-45483025)
[»] chr5 (30 HSPs)
chr5 (21-63)||(9917458-9917500)
chr5 (20-63)||(4496626-4496669)
chr5 (20-63)||(12492381-12492424)
chr5 (20-63)||(14665954-14665997)
chr5 (20-63)||(28411918-28411961)
chr5 (20-63)||(28976856-28976899)
chr5 (20-63)||(29816624-29816667)
chr5 (20-63)||(32925105-32925148)
chr5 (21-63)||(408492-408534)
chr5 (20-62)||(13606994-13607036)
chr5 (23-63)||(3000981-3001021)
chr5 (23-63)||(3302086-3302126)
chr5 (23-63)||(10989085-10989125)
chr5 (22-62)||(38132579-38132619)
chr5 (20-63)||(2915493-2915536)
chr5 (20-63)||(10639544-10639587)
chr5 (28-63)||(28985325-28985360)
chr5 (20-59)||(29929300-29929339)
chr5 (20-63)||(30213817-30213860)
chr5 (20-63)||(42576252-42576295)
chr5 (21-59)||(7359259-7359297)
chr5 (21-63)||(11675772-11675814)
chr5 (21-63)||(13561384-13561426)
chr5 (22-63)||(5558383-5558424)
chr5 (20-61)||(16454768-16454809)
chr5 (22-63)||(18855849-18855890)
chr5 (22-63)||(36551388-36551429)
chr5 (23-63)||(21952604-21952644)
chr5 (23-63)||(27386582-27386622)
chr5 (23-63)||(43557833-43557873)
[»] chr4 (47 HSPs)
chr4 (14-63)||(56130412-56130461)
chr4 (20-63)||(436471-436514)
chr4 (20-63)||(8327143-8327186)
chr4 (20-63)||(21528530-21528573)
chr4 (20-63)||(30634103-30634146)
chr4 (20-63)||(39100533-39100576)
chr4 (20-63)||(45209202-45209245)
chr4 (20-63)||(46153950-46153993)
chr4 (20-63)||(50238612-50238655)
chr4 (20-63)||(50238698-50238741)
chr4 (20-63)||(52569512-52569555)
chr4 (20-63)||(55007988-55008031)
chr4 (18-59)||(29399050-29399091)
chr4 (19-63)||(19969423-19969467)
chr4 (23-63)||(31959814-31959854)
chr4 (23-63)||(48622543-48622583)
chr4 (23-63)||(49416949-49416989)
chr4 (20-63)||(6957840-6957883)
chr4 (20-63)||(8286681-8286724)
chr4 (20-59)||(12494909-12494948)
chr4 (20-63)||(19061932-19061975)
chr4 (20-59)||(19154860-19154899)
chr4 (20-63)||(28236424-28236467)
chr4 (20-63)||(31961263-31961306)
chr4 (20-63)||(32633403-32633446)
chr4 (20-59)||(48174090-48174129)
chr4 (20-59)||(50869877-50869916)
chr4 (20-58)||(49454476-49454514)
chr4 (22-63)||(1777016-1777057)
chr4 (22-59)||(15665347-15665384)
chr4 (22-59)||(22420716-22420753)
chr4 (20-57)||(26772534-26772571)
chr4 (22-63)||(28351801-28351842)
chr4 (20-61)||(31459238-31459279)
chr4 (22-63)||(32479280-32479321)
chr4 (20-57)||(37488339-37488376)
chr4 (16-61)||(39446903-39446948)
chr4 (22-63)||(49939733-49939774)
chr4 (23-59)||(23906297-23906333)
chr4 (23-63)||(27450180-27450220)
chr4 (23-63)||(28348299-28348339)
chr4 (26-62)||(32745831-32745867)
chr4 (19-63)||(40932920-40932964)
chr4 (20-56)||(43434173-43434209)
chr4 (15-63)||(43774099-43774147)
chr4 (19-63)||(45204836-45204880)
chr4 (23-63)||(49738550-49738590)
[»] chr1 (54 HSPs)
chr1 (18-63)||(37311750-37311795)
chr1 (19-63)||(1210987-1211031)
chr1 (19-63)||(38807667-38807711)
chr1 (20-63)||(4318842-4318885)
chr1 (20-63)||(4707218-4707261)
chr1 (20-63)||(25979228-25979271)
chr1 (20-63)||(30202127-30202170)
chr1 (20-63)||(34444598-34444641)
chr1 (20-63)||(38758017-38758060)
chr1 (20-63)||(41165524-41165567)
chr1 (20-63)||(41560471-41560514)
chr1 (20-63)||(43481795-43481838)
chr1 (21-63)||(696512-696554)
chr1 (20-62)||(8809498-8809540)
chr1 (21-63)||(29577494-29577536)
chr1 (21-63)||(44941774-44941816)
chr1 (22-63)||(8796451-8796492)
chr1 (15-63)||(15086164-15086212)
chr1 (20-60)||(36402056-36402096)
chr1 (23-63)||(49347393-49347433)
chr1 (23-63)||(52921322-52921362)
chr1 (20-63)||(2914120-2914163)
chr1 (20-63)||(4001452-4001495)
chr1 (20-63)||(4029364-4029407)
chr1 (20-59)||(7133299-7133338)
chr1 (20-63)||(22090338-22090381)
chr1 (20-63)||(28090691-28090734)
chr1 (23-62)||(29975442-29975481)
chr1 (20-63)||(44751726-44751769)
chr1 (20-63)||(51602298-51602341)
chr1 (24-63)||(52561590-52561629)
chr1 (20-62)||(6757462-6757504)
chr1 (26-64)||(8725812-8725850)
chr1 (21-63)||(9592976-9593018)
chr1 (21-63)||(14224326-14224368)
chr1 (20-62)||(21519167-21519209)
chr1 (21-63)||(34792347-34792389)
chr1 (25-63)||(37462878-37462916)
chr1 (21-63)||(52532614-52532656)
chr1 (20-62)||(52901039-52901081)
chr1 (22-63)||(32079176-32079217)
chr1 (23-60)||(43028808-43028845)
chr1 (26-63)||(50830637-50830674)
chr1 (22-58)||(2462276-2462312)
chr1 (23-63)||(2544835-2544875)
chr1 (23-63)||(12231600-12231640)
chr1 (23-63)||(21769711-21769751)
chr1 (23-63)||(25715326-25715366)
chr1 (23-63)||(28533709-28533749)
chr1 (23-63)||(40568410-40568450)
chr1 (23-63)||(42337798-42337838)
chr1 (20-60)||(42539209-42539249)
chr1 (23-63)||(46423216-46423256)
chr1 (20-56)||(52814291-52814327)
[»] scaffold0168 (1 HSPs)
scaffold0168 (20-63)||(28886-28929)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-63)||(31710-31753)
[»] chr8 (37 HSPs)
chr8 (20-63)||(1064962-1065005)
chr8 (20-63)||(11523720-11523763)
chr8 (20-63)||(14742079-14742122)
chr8 (20-63)||(21121387-21121430)
chr8 (20-63)||(27556299-27556342)
chr8 (20-63)||(36545391-36545434)
chr8 (20-63)||(41031417-41031460)
chr8 (20-63)||(41031523-41031566)
chr8 (21-63)||(1928585-1928627)
chr8 (20-62)||(24837934-24837976)
chr8 (20-62)||(30198263-30198305)
chr8 (21-63)||(35324015-35324057)
chr8 (22-63)||(25473402-25473443)
chr8 (23-63)||(2938335-2938375)
chr8 (19-63)||(30559940-30559984)
chr8 (21-61)||(39651026-39651066)
chr8 (15-63)||(41212105-41212153)
chr8 (23-63)||(44529467-44529507)
chr8 (23-63)||(45419477-45419517)
chr8 (20-63)||(490577-490620)
chr8 (20-63)||(9842362-9842405)
chr8 (20-63)||(15215409-15215452)
chr8 (20-63)||(32978116-32978159)
chr8 (20-59)||(44047529-44047568)
chr8 (21-63)||(3473812-3473854)
chr8 (21-63)||(10668495-10668537)
chr8 (21-63)||(16918494-16918536)
chr8 (21-63)||(30812814-30812856)
chr8 (21-63)||(36565239-36565281)
chr8 (20-62)||(40982893-40982935)
chr8 (22-64)||(41604656-41604698)
chr8 (20-57)||(2027778-2027815)
chr8 (22-63)||(4558207-4558248)
chr8 (22-63)||(39953263-39953304)
chr8 (23-63)||(4061905-4061945)
chr8 (20-60)||(16008392-16008432)
chr8 (23-63)||(35646930-35646970)
[»] scaffold0157 (1 HSPs)
scaffold0157 (20-59)||(25529-25568)
[»] scaffold1318 (1 HSPs)
scaffold1318 (22-63)||(573-614)
[»] scaffold0041 (1 HSPs)
scaffold0041 (23-63)||(16820-16860)
[»] scaffold0022 (1 HSPs)
scaffold0022 (15-63)||(99278-99326)


Alignment Details
Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 119 - 281
Target Start/End: Original strand, 27840146 - 27840308
Alignment:
Q  119 cgtactggtagaagttccttctgatagggtcgtatttatatctaggaatatcaaacacatcaatgacaccaatggctgaagaagaggaggaagcgaacat 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27840146 cgtactggtagaagttccttctgatagggtcgtatttatatctaggaatatcaaacacatcaatgacaccaatggctgaagaagaggaggaagcgaacat 27840245  T
Q  219 atcattagtttcctccgtcccatcggctgccaatagcaagttcaccacacgttgcacaggttc 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27840246 atcattagtttcctccgtcccatcggctgccaatagcaagttcaccacacgttgcactggttc 27840308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 27840039 - 27840092
Alignment:
Q  12 aagaaatcacaacaacaacaaccaagccttgacccactaagtggggtcggctcc 65  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27840039 aagaaatcacaacaacaacaaccaagccttgacccactaagtggggtcggctcc 27840092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 12890860 - 12890817
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  12890860 acaacaacaacaaccaagccttatcccactaagtggggtcggct 12890817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 28085661 - 28085618
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  28085661 acaacaacaacaaccaagccttatcccactaagtggggtcggct 28085618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 30643054 - 30643011
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||| |||| ||||||||||||||||    
T  30643054 acaacaacaacaaccaagccttaacccgctaagtggggtcggct 30643011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 9707052 - 9707012
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  9707052 acaacaacaaccaagccttatcccactaagtggggtcggct 9707012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 33730247 - 33730207
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  33730247 acaacaacaaccaagccttatcccactaagtggggtcggct 33730207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 34934830 - 34934870
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  34934830 acaacaacaaccaagccttatcccactaagtggggtcggct 34934870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 4245869 - 4245912
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||    
T  4245869 acaacaaaaacaaccaagccttatcccactaagtggggtcggct 4245912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 5258145 - 5258188
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||| |||  ||||||||||||||||||||    
T  5258145 acaacaacaacaaccaagacttatcccactaagtggggtcggct 5258188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 1008049 - 1008087
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggt 58  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  1008049 acaacaacaacaaccaagccttttcccactaagtggggt 1008087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 12133901 - 12133942
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  | ||||||||||||||||||    
T  12133901 aacaacaacaaccaagccttttctcactaagtggggtcggct 12133942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Original strand, 451946 - 451990
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggctc 64  Q
    ||||| ||||||||||||||||  ||||| |||||||||||||||    
T  451946 acaacgacaacaaccaagccttatcccaccaagtggggtcggctc 451990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 34143762 - 34143802
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  34143762 acaacaacaacaaccaagccttatcccaataagtggggtcg 34143802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 34156378 - 34156418
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  34156378 acaacaacaacaaccaagccttatcccaataagtggggtcg 34156418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 46148311 - 46148270
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  46148311 aacaacaacaaccaagccttgacccactaagtggggtcggct 46148270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 311306 - 311349
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  311306 acaacaacaacaaccaagccttatcccactaagtggggtcggct 311349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 5169117 - 5169074
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  5169117 acaacaacaacaaccaagccttatcccactaagtggggtcggct 5169074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 12096702 - 12096745
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  12096702 acaacaacaacaaccaagccttatcccactaagtggggtcggct 12096745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 48508520 - 48508477
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  48508520 acaacaacaacaaccaagccttatcccactaagtggggtcggct 48508477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 48532243 - 48532200
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  48532243 acaacaacaacaaccaagccttatcccactaagtggggtcggct 48532200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 53262426 - 53262383
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  53262426 acaacaacaacaaccaagccttatcccactaagtggggtcggct 53262383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 52139084 - 52139042
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  52139084 caacaacaacaaccaagccttatcccactaagtggggtcggct 52139042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 31454224 - 31454265
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  31454224 aacaacaacaaccaagccttatcccactaagtggggtcggct 31454265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 35701134 - 35701093
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    ||||||||||||||||||||||  ||||||||||||||||||    
T  35701134 acaacaacaacaaccaagccttatcccactaagtggggtcgg 35701093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 37083291 - 37083332
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  37083291 aacaacaacaaccaagccttatcccactaagtggggtcggct 37083332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 39512826 - 39512785
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  39512826 aacaacaacaaccaagccttatcccactaagtggggtcggct 39512785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 48259988 - 48259947
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  48259988 caacaacaacaaccaagccttatcccactaagtggggtcggc 48259947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 2133609 - 2133649
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  2133609 acaacaacaacaaccaagccttatcccactaagtggggtcg 2133649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 31566161 - 31566201
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  31566161 acaacaacaaccaagccttatcccactaagtggggtcggct 31566201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 22357 - 22314
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||| ||  ||||||||||||||||||||    
T  22357 acaacaacaacaaccaagctttatcccactaagtggggtcggct 22314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 237293 - 237336
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||| |||||||||||||||    
T  237293 acaacaacaacaaccaagccttatcccattaagtggggtcggct 237336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 7895877 - 7895920
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||| |||||||||||||||    
T  7895877 acaacaacaacaaccaagccttatcccattaagtggggtcggct 7895920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 15296189 - 15296150
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  15296189 acaacaacaaccaagccttatcccactaagtggggtcggc 15296150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 27192505 - 27192466
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  27192505 acaacaacaaccaagccttatcccactaagtggggtcggc 27192466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 40273202 - 40273245
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||    
T  40273202 acaacaacaacaaccaaaccttttcccactaagtggggtcggct 40273245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 45374474 - 45374513
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  45374474 acaacaacaacaaccaagccttatcccactaagtggggtc 45374513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45834597 - 45834640
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  45834597 acaacaacaacaaccaagccttatcccactaagtggggttggct 45834640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 47555329 - 47555372
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  47555329 acaacaacaacaaccaagccttatcccactaagtggggttggct 47555372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 49503565 - 49503608
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||||||||| |||||||||    
T  49503565 acaacaacaacaaccaagccttatcccactaagtagggtcggct 49503608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 52156081 - 52156124
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||    
T  52156081 acaacaacaacaaccgagccttatcccactaagtggggtcggct 52156124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 52927845 - 52927888
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||| |||||||||||||||  ||||||||||||||||||||    
T  52927845 acaacatcaacaaccaagccttatcccactaagtggggtcggct 52927888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 53519865 - 53519822
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  | ||||||||||||||||||    
T  53519865 acaacaacaacaaccaagccttatctcactaagtggggtcggct 53519822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 659805 - 659767
Alignment:
Q  25 aacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  659805 aacaacaaccaagccttaccccactaagtggggtcggct 659767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 23610930 - 23610972
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  |||||||||||||| |||||    
T  23610930 caacaacaacaaccaagccttatcccactaagtggggccggct 23610972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 54128662 - 54128624
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  54128662 aacaacaacaaccaagccttatcccactaagtggggtcg 54128624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 41530040 - 41530003
Alignment:
Q  26 acaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  41530040 acaacaaccaagccttatcccactaagtggggtcggct 41530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 49045114 - 49045077
Alignment:
Q  26 acaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  49045114 acaacaaccaagccttgtcccactgagtggggtcggct 49045077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 53867981 - 53868018
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  53867981 aacaacaacaaccatgccttgtcccactaagtggggtc 53868018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 14415260 - 14415300
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  14415260 acaacaacaaccaagtcttatcccactaagtggggtcggct 14415300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 24778609 - 24778649
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||| |||||||||  ||||||||||||||||||||    
T  24778609 acaacaacagccaagccttatcccactaagtggggtcggct 24778649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 29928288 - 29928332
Alignment:
Q  17 atcacaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    ||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  29928288 atcacaacaactacaatcaagctttgtcccactaagtggggtcgg 29928332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 29977442 - 29977486
Alignment:
Q  17 atcacaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    ||||||||||| |||| ||||| ||| ||||||||||||||||||    
T  29977442 atcacaacaactacaatcaagctttgtcccactaagtggggtcgg 29977486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 40106620 - 40106656
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtc 59  Q
    |||||||||||||||||||  ||||||||||||||||    
T  40106620 acaacaacaaccaagccttatcccactaagtggggtc 40106656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 43396082 - 43396122
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||| ||  ||||||||||||||||||||    
T  43396082 acaacaacaaccaagctttatcccactaagtggggtcggct 43396122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 43529330 - 43529294
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtgggg 57  Q
    |||||||||||||||||||||  ||||||||||||||    
T  43529330 caacaacaacaaccaagccttatcccactaagtgggg 43529294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 47233596 - 47233636
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  47233596 acaacaacaaccaagccttatcccactaactggggtcggct 47233636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 49090673 - 49090633
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  |||| |||||||||||||||    
T  49090673 acaacaacaaccaagccttttcccattaagtggggtcggct 49090633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 50249662 - 50249622
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    |||||||||||||||||||| |  |||||||||||||||||    
T  50249662 acaacaacaacaaccaagccgtatcccactaagtggggtcg 50249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 52077473 - 52077509
Alignment:
Q  27 caacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||| ||||||||||||| ||||||    
T  52077473 caacaaccaagccttgtcccactaagtgggatcggct 52077509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 52882662 - 52882702
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||| ||||    
T  52882662 acaacaacaaccaagccttctcccactaagtggggttggct 52882702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 43281959 - 43281916
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  43281959 acaacaacaacaaccaagccttgtcccactaagtggggtcggct 43281916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 2885719 - 2885762
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  2885719 acaacaacaacaaccaagccttatcccactaagtggggtcggct 2885762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 11594245 - 11594202
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  11594245 acaacaacaacaaccaagccttatcccactaagtggggtcggct 11594202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 12841272 - 12841315
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  12841272 acaacaacaacaaccaagccttatcccactaagtggggtcggct 12841315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 14594037 - 14593994
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  14594037 acaacaacaacaaccaagccttatcccactaagtggggtcggct 14593994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 16013560 - 16013517
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  16013560 acaacaacaacaaccaagccttatcccactaagtggggtcggct 16013517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 28208325 - 28208368
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  28208325 acaacaacaacaaccaagccttatcccactaagtggggtcggct 28208368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 29650669 - 29650626
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  29650669 acaacaacaacaaccaagccttatcccactaagtggggtcggct 29650626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 31005490 - 31005447
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  31005490 acaacaacaacaaccaagccttatcccactaagtggggtcggct 31005447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 31682599 - 31682642
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  31682599 acaacaacaacaaccaagccttatcccactaagtggggtcggct 31682642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 32631849 - 32631806
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  32631849 acaacaacaacaaccaagccttatcccactaagtggggtcggct 32631806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 38607277 - 38607234
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  38607277 acaacaacaacaaccaagccttaacccactaagtggagtcggct 38607234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 39906369 - 39906412
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  39906369 acaacaacaacaaccaagccttatcccactaagtggggtcggct 39906412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 40630719 - 40630676
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  40630719 acaacaacaacaaccaagccttttcccactaagtggggtcggct 40630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 43491593 - 43491550
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  43491593 acaacaacaacaaccaagccttatcccactaagtggggtcggct 43491550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 44855171 - 44855214
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  44855171 acaacaacaacaaccaagccttatcccactaagtggggtcggct 44855214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 37618229 - 37618187
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  37618229 caacaacaacaaccaagccttatcccactaagtggggtcggct 37618187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 43423983 - 43424029
Alignment:
Q  15 aaatcacaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||||    
T  43423983 aaataacaacaacaacaaccaagccttatcccactaagtggggtcgg 43424029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 1011329 - 1011288
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  1011329 aacaacaacaaccaagccttatcccactaagtggggtcggct 1011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 21244282 - 21244323
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  21244282 aacaacaacaaccaagccttatcccactaagtggggtcggct 21244323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 27649063 - 27649022
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  27649063 aacaacaacaaccaagccttatcccactaagtggggtcggct 27649022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 31869101 - 31869142
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  31869101 aacaacaacaaccaagccttatcccactaagtggggtcggct 31869142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 47652830 - 47652789
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  47652830 aacaacaacaaccaagccttatcccactaagtggggtcggct 47652789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 40979928 - 40979968
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  40979928 acaacaacaaccaagccttatcccactaagtggggtcggct 40979968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 6375153 - 6375110
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||    
T  6375153 acaacgacaacaaccaagccttatcccactaagtggggtcggct 6375110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 12966301 - 12966258
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||    
T  12966301 acaacaacaacaaccaagccttatcccactaagtgggatcggct 12966258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 20899456 - 20899413
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||||||||||||| |||||    
T  20899456 acaacaacaacaaccaagccttatcccactaagtggggccggct 20899413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 28708666 - 28708623
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||    
T  28708666 acaacaacatcaaccaagccttatcccactaagtggggtcggct 28708623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 34746028 - 34745989
Alignment:
Q  24 caacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  34746028 caacaacaaccaagccttatcccactaagtggggtcggct 34745989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 36101774 - 36101813
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  36101774 acaacaacaacaaccaagccttatcccactaagtggggtc 36101813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 36869234 - 36869277
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||| |||||||||||||||    
T  36869234 acaacaacaacaaccaagccttatcccattaagtggggtcggct 36869277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 42187726 - 42187683
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||| |||||||  ||||||||||||||||||||    
T  42187726 acaacaacaacaacaaagccttatcccactaagtggggtcggct 42187683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45836479 - 45836522
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||    
T  45836479 acaacaacaacaaccgagccttatcccactaagtggggtcggct 45836522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 47413712 - 47413751
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  47413712 acaacaacaacaaccaagccttatcccactaagtggggtc 47413751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 6263539 - 6263501
Alignment:
Q  25 aacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  6263539 aacaacaaccaagccttatcccactaagtggggtcggct 6263501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 28355450 - 28355412
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  28355450 caacaacaacaaccaagccttatcccactaagtggggtc 28355412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 31681022 - 31681060
Alignment:
Q  25 aacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  31681022 aacaacaaccaagccttttcccactaagtggggtcggct 31681060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 1531372 - 1531413
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||   ||||||||||||||||||||    
T  1531372 aacaacaacaaccaagcctaatcccactaagtggggtcggct 1531413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 7273383 - 7273342
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||| ||||||||  ||||||||||||||||||||    
T  7273383 aacaacaacaatcaagccttatcccactaagtggggtcggct 7273342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 33650869 - 33650906
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  33650869 aacaacaacaaccaagccttatcccactaagtggggtc 33650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 35725568 - 35725605
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtgggg 57  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  35725568 acaacaacaacaaccaagccttatcccactaagtgggg 35725605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 35734691 - 35734732
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggctc 64  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  35734691 acaacaacaaccaagccttatcccgctaagtggggtcggctc 35734732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5418359 - 5418319
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    ||||||||||||||||||||||  |||||||| ||||||||    
T  5418359 acaacaacaacaaccaagccttatcccactaaatggggtcg 5418319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 22349905 - 22349865
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    ||||||||||||| ||||||||  |||||||||||||||||    
T  22349905 acaacaacaacaatcaagccttatcccactaagtggggtcg 22349865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 38900241 - 38900205
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggg 56  Q
    ||||||||||||||||||||||  |||||||||||||    
T  38900241 acaacaacaacaaccaagccttatcccactaagtggg 38900205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 41157937 - 41157897
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||| ||||||||  ||||||||||||||||||||    
T  41157937 acaacaacaatcaagccttatcccactaagtggggtcggct 41157897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 451645 - 451688
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  451645 acaacaacaacaaccaagccttgtcccactaagtggggtcggct 451688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 38429694 - 38429649
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggctcc 65  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  38429694 acaacaacaacaaccaagccttatcccactaagtggggtcggctcc 38429649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 4807881 - 4807837
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  4807881 cacaacaacaacaaccaagccttatcccactaagtggggtcggct 4807837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 9531596 - 9531640
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  9531596 cacaacaacaacaaccaagccttatcccactaagtggggtcggct 9531640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 26566341 - 26566297
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  26566341 cacaacaacaacaaccaagccttaacccactaagtggggttggct 26566297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 227474 - 227431
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  227474 acaacaacaacaaccaagccttatcccactaagtggggtcggct 227431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 3635320 - 3635363
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  3635320 acaacaacaacaaccaagccttatcccactaagtggggtcggct 3635363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 9496151 - 9496108
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  9496151 acaacaacaacaaccaagccttgtcccactaagtggggttggct 9496108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 12489799 - 12489842
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  12489799 acaacaacaacaaccaagccttatcccactaagtggggtcggct 12489842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 17670753 - 17670710
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  17670753 acaacaacaacaaccaagccttatcccactaagtggggtcggct 17670710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 25834963 - 25834920
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  25834963 acaacaacaacaaccaagccttatcccactaagtggggtcggct 25834920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 30306317 - 30306274
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  30306317 acaacaacaacaaccaagccttatcccactaagtggggtcggct 30306274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 35643233 - 35643190
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  35643233 acaacaacaacaaccaagccttatcccactaagtggggtcggct 35643190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 38328367 - 38328410
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  38328367 acaacaacaacaaccaagccttatcccactaagtggggtcggct 38328410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 43573127 - 43573170
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  43573127 acaacaacaacaaccaagccttatcccactaagtggggtcggct 43573170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 44437718 - 44437761
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  44437718 acaacaacaacaaccaagccttatcccactaagtggggtcggct 44437761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 10403891 - 10403933
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  10403891 caacaacaacaaccaagccttatcccactaagtggggtcggct 10403933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 12520060 - 12520102
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  12520060 caacaacaacaaccaagccttatcccactaagtggggtcggct 12520102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 37520731 - 37520689
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  37520731 acaacaacaacaaccaagccttatcccactaagtggggtcggc 37520689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 28508961 - 28508920
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  28508961 aacaacaacaaccaagccttatcccactaagtggggtcggct 28508920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 2073307 - 2073347
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  2073307 acaacaacaaccaagccttatcccactaagtggggtcggct 2073347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 12474927 - 12474967
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  12474927 acaacaacaaccaagccttatcccactaagtggggtcggct 12474967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 12734985 - 12734945
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  12734985 acaacaacaacaaccaagccttatcccactaagtggggtcg 12734945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 38452686 - 38452726
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  38452686 acaacaacaaccaagccttatcccactaagtggggtcggct 38452726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 41763043 - 41763083
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcggct 41763083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 3243654 - 3243693
Alignment:
Q  24 caacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  3243654 caacaacaaccaagccttatcccactaagtggggtcggct 3243693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 3866357 - 3866314
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  || |||||||||||||||||    
T  3866357 acaacaacaacaaccaagccttatcctactaagtggggtcggct 3866314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 7326157 - 7326200
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  7326157 acaacaacaacaaccaagccttatcccactaagtggggttggct 7326200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 15775842 - 15775885
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  15775842 acaacaacaacaaccaagccttattccactaagtggggtcggct 15775885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 39029872 - 39029829
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||| |||||||||||||||||  ||||||||||||||||||||    
T  39029872 acaagaacaacaaccaagccttatcccactaagtggggtcggct 39029829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 42543520 - 42543477
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||||||||||||| |||||    
T  42543520 acaacaacaacaaccaagccttatcccactaagtggggccggct 42543477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 13188427 - 13188389
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggt 58  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  13188427 acaacaacaacaaccaagccttatcccactaagtggggt 13188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 1648149 - 1648112
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtgggg 57  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  1648149 acaacaacaacaaccaagccttatcccactaagtgggg 1648112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 2610873 - 2610832
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    ||||||||||||||||||||||  | ||||||||||||||||    
T  2610873 acaacaacaacaaccaagccttatctcactaagtggggtcgg 2610832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 14444954 - 14444917
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtgggg 57  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  14444954 acaacaacaacaaccaagccttatcccactaagtgggg 14444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 16521007 - 16521047
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  16521007 acaacaacaaccgagccttatcccactaagtggggtcggct 16521047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 17429332 - 17429292
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  | ||||||||||||||||||    
T  17429332 acaacaacaaccaagccttatctcactaagtggggtcggct 17429292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 33504502 - 33504466
Alignment:
Q  27 caacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||  ||||||||||||||||||||    
T  33504502 caacaaccaagccttatcccactaagtggggtcggct 33504466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 36183733 - 36183693
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  36183733 acaacaacaaccaagccttatcctactaagtggggtcggct 36183693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 45482989 - 45483025
Alignment:
Q  27 caacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||  ||||||||||||||||||||    
T  45482989 caacaaccaagccttatcccactaagtggggtcggct 45483025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 9917458 - 9917500
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  9917458 caacaacaacaaccaagccttaacccactaagtggggtcggct 9917500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 4496669 - 4496626
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  4496669 acaacaacaacaaccaagccttatcccactaagtggggtcggct 4496626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 12492381 - 12492424
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  12492381 acaacaacaacaaccaagccttatcccactaagtggggtcggct 12492424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 14665997 - 14665954
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  14665997 acaacaacaacaaccaagccttatcccactaagtggggtcggct 14665954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 28411961 - 28411918
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  28411961 acaacaacaacaaccaagccttatcccactaagtggggtcggct 28411918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 28976856 - 28976899
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  28976856 acaacaacaacaaccaagccttatcccactaagtggggtcggct 28976899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 29816667 - 29816624
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  29816667 acaacaacaacaaccaagccttatcccactaagtggggtcggct 29816624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 32925148 - 32925105
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  32925148 acaacaacaacaaccaagccttgtcccactaagcggggtcggct 32925105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 408492 - 408534
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  408492 caacaacaacaaccaagccttatcccactaagtggggtcggct 408534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 13606994 - 13607036
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  13606994 acaacaacaacaaccaagccttatcccactaagtggggtcggc 13607036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 3001021 - 3000981
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  3001021 acaacaacaaccaagccttatcccactaagtggggtcggct 3000981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 3302126 - 3302086
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  3302126 acaacaacaaccaagccttatcccactaagtggggtcggct 3302086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 10989085 - 10989125
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  10989085 acaacaacaaccaagccttatcccactaagtggggtcggct 10989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 38132619 - 38132579
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  38132619 aacaacaacaaccaagccttatcccactaagtggggtcggc 38132579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 2915493 - 2915536
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||| |||||||||||  ||||||||||||||||||||    
T  2915493 acaacaacaataaccaagccttatcccactaagtggggtcggct 2915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 10639587 - 10639544
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||    
T  10639587 acaacaacaacaaccaagccttatcccacaaagtggggtcggct 10639544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 28985360 - 28985325
Alignment:
Q  28 aacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||| ||||||||||||||||||||    
T  28985360 aacaaccaagccttgtcccactaagtggggtcggct 28985325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 29929339 - 29929300
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  29929339 acaacaacaacaaccaagccttatcccactaagtggggtc 29929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 30213860 - 30213817
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||    
T  30213860 acaacaaaaacaaccaagccttatcccactaagtggggtcggct 30213817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 42576295 - 42576252
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||||||||| |||||||||    
T  42576295 acaacaacaacaaccaagccttatcccactaagtcgggtcggct 42576252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 7359259 - 7359297
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  7359259 caacaacaacaaccaagtcttgtcccactaagtggggtc 7359297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 11675814 - 11675772
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  || |||||||||||||||||    
T  11675814 caacaacaacaaccaagccttatccaactaagtggggtcggct 11675772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 13561384 - 13561426
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||| ||||||||  ||||||||||||||||||||    
T  13561384 caacaacaacaaacaagccttatcccactaagtggggtcggct 13561426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 5558424 - 5558383
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  5558424 aacaacgacaaccaagccttatcccactaagtggggtcggct 5558383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 16454809 - 16454768
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    ||||||||||||| |||||||| ||||||| |||||||||||    
T  16454809 acaacaacaacaatcaagccttaacccactcagtggggtcgg 16454768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 18855890 - 18855849
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  18855890 aacaacaacaaccaagtcttatcccactaagtggggtcggct 18855849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 36551429 - 36551388
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  | ||||||||||||||||||    
T  36551429 aacaacaacaaccaagccttatctcactaagtggggtcggct 36551388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 21952644 - 21952604
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  21952644 acaacaacaaccgagccttttcccactaagtggggtcggct 21952604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 27386622 - 27386582
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  27386622 acaacaacaaccatgccttatcccactaagtggggtcggct 27386582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 43557833 - 43557873
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||| |||||  ||||||||||||||||||||    
T  43557833 acaacaacaaccaggccttatcccactaagtggggtcggct 43557873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 56130461 - 56130412
Alignment:
Q  14 gaaatcacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  56130461 gaaatgacaacaacaacaaccaagccttatcccactaagtggggtcggct 56130412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 436514 - 436471
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  436514 acaacaacaacaaccaagccttatcccactaagtggggtcggct 436471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 8327186 - 8327143
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  8327186 acaacaacaacaaccaagccttatcccactaagtggggtcggct 8327143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 21528573 - 21528530
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  21528573 acaacaacaacaaccaagccttatcccactaagtggggtcggct 21528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 30634103 - 30634146
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  30634103 acaacaacaacaaccaagccttatcccactaagtggggtcggct 30634146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 39100533 - 39100576
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  39100533 acaacaacaacaaccaagccttatcccactaagtggggtcggct 39100576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 45209202 - 45209245
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  45209202 acaacaacaacaaccaagccttatcccactaagtggggtcggct 45209245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 46153993 - 46153950
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  46153993 acaacaacaacaaccaagccttatcccactaagtggggtcggct 46153950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 50238612 - 50238655
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  50238612 acaacaacaacaaccaagccttatcccactaagtggggtcggct 50238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 50238698 - 50238741
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  50238698 acaacaacaacaaccaagccttatcccactaagtggggtcggct 50238741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 52569512 - 52569555
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  52569512 acaacaacaacaaccaagccttatcccactaagtggggtcggct 52569555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 55008031 - 55007988
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  55008031 acaacaacaacaaccaagccttatcccactaagtggggtcggct 55007988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 29399091 - 29399050
Alignment:
Q  18 tcacaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  29399091 tcacaacaacaacaaccaagccttttcccactaagtggggtc 29399050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 19969467 - 19969423
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||| ||||||  ||||||||||||||||||||    
T  19969467 cacaacaacaacaaccgagccttatcccactaagtggggtcggct 19969423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 31959814 - 31959854
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  31959814 acaacaacaaccaagccttatcccactaagtggggtcggct 31959854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 48622543 - 48622583
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  48622543 acaacaacaaccaagccttatcccactaagtggggtcggct 48622583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 49416989 - 49416949
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  49416989 acaacaacaaccaagccttatcccactaagtggggtcggct 49416949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 6957883 - 6957840
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||    
T  6957883 acaacaacaacaaccaagccttatcccactaagtgggatcggct 6957840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 8286724 - 8286681
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||||||||||||| |||||    
T  8286724 acaacaacaacaaccaagccttatcccactaagtgggggcggct 8286681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 12494948 - 12494909
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  12494948 acaacaacaacaaccaagccttatcccactaagtggggtc 12494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 19061932 - 19061975
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||    
T  19061932 acaacaacaacaaccaagccttatcccactaggtggggtcggct 19061975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 19154860 - 19154899
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  19154860 acaacaacaacaaccaagccttatcccactaagtggggtc 19154899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 28236467 - 28236424
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||| |||  ||||||||||||||||||||    
T  28236467 acaacaacaacaaccaagtcttatcccactaagtggggtcggct 28236424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 31961263 - 31961306
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||    
T  31961263 acaacaacaacaaccaagccttatcccactaagtgaggtcggct 31961306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 32633403 - 32633446
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  32633403 acaacaacaacaaccaagccttttcccactaagtggggttggct 32633446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 48174090 - 48174129
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  48174090 acaacaacaacaaccaagccttatcccactaagtggggtc 48174129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 50869877 - 50869916
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  50869877 acaacaacaacaaccaagccttatcccactaagtggggtc 50869916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 49454476 - 49454514
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggt 58  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  49454476 acaacaacaacaaccaagccttatcccactaagtggggt 49454514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 1777016 - 1777057
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  |||| |||||||||||||||    
T  1777016 aacaacaacaaccaagccttatcccattaagtggggtcggct 1777057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 15665384 - 15665347
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  15665384 aacaacaacaaccaagccttatcccactaagtggggtc 15665347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 22420716 - 22420753
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  22420716 aacaacaacaaccaagccttatcccactaagtggggtc 22420753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 26772534 - 26772571
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtgggg 57  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  26772534 acaacaacaacaaccaagccttatcccactaagtgggg 26772571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 28351842 - 28351801
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||| |||||||||  ||||||||||||||||||||    
T  28351842 aacaacaacagccaagccttaccccactaagtggggtcggct 28351801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 31459279 - 31459238
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    ||||| ||||||||||||||||  ||||||||||||||||||    
T  31459279 acaacgacaacaaccaagccttatcccactaagtggggtcgg 31459238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 32479321 - 32479280
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||   |||||||||||||||||||    
T  32479321 aacaacaacaaccaagcctttttccactaagtggggtcggct 32479280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 37488376 - 37488339
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtgggg 57  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  37488376 acaacaacaacaaccaagccttatcccactaagtgggg 37488339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 39446903 - 39446948
Alignment:
Q  16 aatcacaacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    |||||||||||| |||||||||||||  |||| |||||||||||||    
T  39446903 aatcacaacaaccacaaccaagccttatcccattaagtggggtcgg 39446948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 49939733 - 49939774
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||| ||||||  ||||||||||||||||||||    
T  49939733 aacaacaacaaccgagccttatcccactaagtggggtcggct 49939774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 23906297 - 23906333
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtc 59  Q
    |||||||||||||||||||  ||||||||||||||||    
T  23906297 acaacaacaaccaagccttatcccactaagtggggtc 23906333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 27450180 - 27450220
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||| ||||||||||||  ||||||||||||||||||||    
T  27450180 acaacagcaaccaagccttatcccactaagtggggtcggct 27450220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 28348339 - 28348299
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||| ||||||||||    
T  28348339 acaacaacaaccaagccttatcccactaagcggggtcggct 28348299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 32745867 - 32745831
Alignment:
Q  26 acaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||  |||||||||||||||||||    
T  32745867 acaacaaccaagccttatcccactaagtggggtcggc 32745831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 40932920 - 40932964
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||| ||||||||  ||||| ||||||||||||||    
T  40932920 cacaacaacaacaatcaagccttatcccaccaagtggggtcggct 40932964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 43434209 - 43434173
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggg 56  Q
    ||||||||||||||||||||||  |||||||||||||    
T  43434209 acaacaacaacaaccaagccttatcccactaagtggg 43434173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 43774147 - 43774099
Alignment:
Q  15 aaatcacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||| ||||||||||||| ||||||||  |||||||| |||||||||||    
T  43774147 aaataacaacaacaacaatcaagccttatcccactaaatggggtcggct 43774099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 45204836 - 45204880
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||||  |||||||||| |||| ||||    
T  45204836 cacaacaacaacaaccaagccttatcccactaagttgggtgggct 45204880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 49738550 - 49738590
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  |||||||| |||||||||||    
T  49738550 acaacaacaaccaagccttatcccactaaatggggtcggct 49738590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 37311750 - 37311795
Alignment:
Q  18 tcacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||    
T  37311750 tcacaacaacaacaaccaagccttttcccactaagtggggtcggct 37311795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 1211031 - 1210987
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  1211031 cacaacaacaacaaccaagccttatcccactaagtggggtcggct 1210987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 38807667 - 38807711
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||||  ||||||||||||||||||||    
T  38807667 cacaacaacaacaaccaagccttatcccactaagtggggtcggct 38807711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 4318842 - 4318885
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  4318842 acaacaacaacaaccaagccttttcccactaagtggggtcggct 4318885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 4707218 - 4707261
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  4707218 acaacaacaacaaccaagccttatcccactaagtggggtcggct 4707261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 25979228 - 25979271
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  25979228 acaacaacaacaaccaagccttatcccactaagtggggtcggct 25979271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 30202127 - 30202170
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  30202127 acaacaacaacaaccaagccttatcccactaagtggggtcggct 30202170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 34444641 - 34444598
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  34444641 acaacaacaacaaccaagccttatcccactaagtggggtcggct 34444598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 38758017 - 38758060
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  38758017 acaacaacaacaaccaagccttatcccactaagtggggtcggct 38758060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 41165567 - 41165524
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  41165567 acaacaacaacaaccaagccttttcccactaagtggggtcggct 41165524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 41560514 - 41560471
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  41560514 acaacaacaacaaccaagccttatcccactaagtggggtcggct 41560471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 43481795 - 43481838
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  43481795 acaacaacaacaaccaagccttatcccactaagtggggtcggct 43481838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 696554 - 696512
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  696554 caacaacaacaaccaagccttatcccactaagtggggtcggct 696512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 8809498 - 8809540
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  8809498 acaacaacaacaaccaagccttatcccactaagtggggtcggc 8809540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 29577536 - 29577494
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  29577536 caacaacaacaaccaagccttatcccactaagtggggtcggct 29577494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 44941774 - 44941816
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  44941774 caacaacaacaaccaagccttatcccactaagtggggtcggct 44941816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 8796492 - 8796451
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  8796492 aacaacaacaaccaagccttatcccactaagtggggtcggct 8796451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 15086212 - 15086164
Alignment:
Q  15 aaatcacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||| ||||||||||||||||||||||  ||||||||||||||| ||||    
T  15086212 aaataacaacaacaacaaccaagccttatcccactaagtggggttggct 15086164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 36402056 - 36402096
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  36402056 acaacaacaacaaccaagccttaatccactaagtggggtcg 36402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 49347393 - 49347433
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  49347393 acaacaacaaccaagccttatcccactaagtggggtcggct 49347433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 52921362 - 52921322
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  52921362 acaacaacaaccaagccttatcccactaagtggggtcggct 52921322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 2914120 - 2914163
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  2914120 acaacaacaacaaccaagccttatcccactaagtggggttggct 2914163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 4001452 - 4001495
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  4001452 acaacaacaacaaccaagccttttcccactaagtggggttggct 4001495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 4029407 - 4029364
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||| |||  ||||||||||||||||||||    
T  4029407 acaacaacaacaaccaagtcttatcccactaagtggggtcggct 4029364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 7133299 - 7133338
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  7133299 acaacaacaacaaccaagccttttcccactaagtggggtc 7133338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 22090381 - 22090338
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||||| |||||||||||||    
T  22090381 acaacaacaacaaccaagccttatcccacttagtggggtcggct 22090338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 28090691 - 28090734
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||| |||  ||||||||||||||||||||    
T  28090691 acaacaacaacaaccaagtcttatcccactaagtggggtcggct 28090734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 62
Target Start/End: Complemental strand, 29975481 - 29975442
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  29975481 acaacaacaaccaagccttatcccactaagtggggtcggc 29975442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 44751769 - 44751726
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||| ||||||||    
T  44751769 acaacaacaacaaccaagccttatcccactaagtgaggtcggct 44751726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 51602341 - 51602298
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||| ||||    
T  51602341 acaacaacaacaaccaagccttatcccactaagtggggttggct 51602298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 52561590 - 52561629
Alignment:
Q  24 caacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  52561590 caacaacaaccaagccttatcccactaagtggggtcggct 52561629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 6757504 - 6757462
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  6757504 acaacaacatcaaccaagccttatcccactaagtggggtcggc 6757462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 8725812 - 8725850
Alignment:
Q  26 acaacaaccaagccttgacccactaagtggggtcggctc 64  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  8725812 acaacaaccaagccttatcccactaagtggggtcggctc 8725850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 9593018 - 9592976
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  |||| |||||||||||||||    
T  9593018 caacaacaacaaccaagccttatcccattaagtggggtcggct 9592976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 14224368 - 14224326
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||| ||||| |||||||||| |||||||||    
T  14224368 caacaacaacaaccaatccttgtcccactaagtagggtcggct 14224326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 21519209 - 21519167
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||| ||  |||||||||||||||||||    
T  21519209 acaacaacaacaaccaagctttatcccactaagtggggtcggc 21519167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 34792347 - 34792389
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  |||| |||||||||||||||    
T  34792347 caacaacaacaaccaagccttatcccattaagtggggtcggct 34792389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 37462878 - 37462916
Alignment:
Q  25 aacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggct 37462916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 52532614 - 52532656
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||| ||||||||||||||||  ||||||||||||||||||||    
T  52532614 caaccacaacaaccaagccttttcccactaagtggggtcggct 52532656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 52901081 - 52901039
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||| ||||||||||  |||||||||||||||||||    
T  52901081 acaacaacaaccaccaagccttatcccactaagtggggtcggc 52901039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 32079176 - 32079217
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||| ||||||||||||||    
T  32079176 aacaacaacaaccaagccttatcccaccaagtggggtcggct 32079217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 43028808 - 43028845
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    |||||||||||||||||||  |||||||||||||||||    
T  43028808 acaacaacaaccaagccttatcccactaagtggggtcg 43028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 50830637 - 50830674
Alignment:
Q  26 acaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  50830637 acaacaaccaagccttaccccactaagtggggtcggct 50830674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 2462276 - 2462312
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggt 58  Q
    |||||||||||||||||||| |||| |||||||||||    
T  2462276 aacaacaacaaccaagccttaaccccctaagtggggt 2462312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 2544875 - 2544835
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||   |||||||||||||||||||    
T  2544875 acaacaacaaccaagccttttaccactaagtggggtcggct 2544835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 12231640 - 12231600
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  || |||||||||||||||||    
T  12231640 acaacaacaaccaagccttatcctactaagtggggtcggct 12231600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 21769711 - 21769751
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  | ||||||||||||||||||    
T  21769711 acaacaacaaccaagccttatcacactaagtggggtcggct 21769751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 25715326 - 25715366
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||| ||||||||    
T  25715326 acaacaacaaccaagccttatcccactaagtgaggtcggct 25715366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 28533749 - 28533709
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||| |||  ||||||||||||||||||||    
T  28533749 acaacaacaaccaagtcttatcccactaagtggggtcggct 28533709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 40568410 - 40568450
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||| ||||    
T  40568410 acaacaacaaccaagccttatcccactaagtggggttggct 40568450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 42337838 - 42337798
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||| ||||    
T  42337838 acaacaacaaccaagccttatcccactaagtggggttggct 42337798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 42539209 - 42539249
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    |||||||||| |||||||||||  |||||||||||||||||    
T  42539209 acaacaacaataaccaagccttttcccactaagtggggtcg 42539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 46423216 - 46423256
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  46423216 acaacaacaaccgagccttatcccactaagtggggtcggct 46423256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 52814291 - 52814327
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggg 56  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  52814291 acaacaaaaacaaccaagccttaacccactaagtggg 52814327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 28886 - 28929
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  28886 acaacaacaacaaccaagccttatcccactaagtggggtcggct 28929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 31753 - 31710
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  31753 acaacaacaacaaccaagccttatcccactaagtggggtcggct 31710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000003; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 1065005 - 1064962
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  1065005 acaacaacaacaaccaagccttatcccactaagtggggtcggct 1064962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 11523720 - 11523763
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  11523720 acaacaacaacaaccaagccttatcccactaagtggggtcggct 11523763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 14742079 - 14742122
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  14742079 acaacaacaacaaccaagccttatcccactaagtggggtcggct 14742122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 21121430 - 21121387
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  21121430 acaacaacaacaaccaagccttttcccactaagtggggtcggct 21121387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 27556299 - 27556342
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  27556299 acaacaacaacaaccaagctttaacccactaagtggggtcggct 27556342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 36545434 - 36545391
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  36545434 acaacaacaacaaccaagccttatcccactaagtggggtcggct 36545391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 41031417 - 41031460
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  41031417 acaacaacaacaaccaagccttatcccactaagtggggtcggct 41031460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 41031523 - 41031566
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  41031523 acaacaacaacaaccaagccttatcccactaagtggggtcggct 41031566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 1928585 - 1928627
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  1928585 caacaacaacaaccaagccttatcccactaagtggggtcggct 1928627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 24837976 - 24837934
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  24837976 acaacaacaacaaccaagccttatcccactaagtggggtcggc 24837934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 30198263 - 30198305
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  30198263 acaacaacaacaaccaagccttatcccactaagtggggtcggc 30198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 35324057 - 35324015
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  35324057 caacaacaacaaccaagccttatcccactaagtggggtcggct 35324015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 25473402 - 25473443
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  25473402 aacaacaacaaccaagccttatcccactaagtggggtcggct 25473443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 2938375 - 2938335
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  2938375 acaacaacaaccaagccttaacccactaagtggggtaggct 2938335  T

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Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 30559984 - 30559940
Alignment:
Q  19 cacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  30559984 cacaacaacaacaaccaagccttatcccactaactggggtcggct 30559940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 39651026 - 39651066
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcgg 61  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  39651026 caacaacaacaaccaagccttatcccactaagtggggtcgg 39651066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 41212153 - 41212105
Alignment:
Q  15 aaatcacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||| ||||||||||||||||||| ||  ||||||||||||||||||||    
T  41212153 aaatgacaacaacaacaaccaagcattttcccactaagtggggtcggct 41212105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 44529507 - 44529467
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  44529507 acaacaacaaccaagccttatcccactaagtggggtcggct 44529467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 45419517 - 45419477
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  45419517 acaacaacaaccaagccttatcccactaagtggggtcggct 45419477  T

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Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 490620 - 490577
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||    
T  490620 acaacaacaacaaacaagccttatcccactaagtggggtcggct 490577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 9842405 - 9842362
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||   |||||||||||||||||||    
T  9842405 acaacaacaacaaccaagccttatgccactaagtggggtcggct 9842362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 15215409 - 15215452
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  || |||||||||||||||||    
T  15215409 acaacaacaacaaccaagccttatcctactaagtggggtcggct 15215452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 32978159 - 32978116
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||||  |||||||||| |||||||||    
T  32978159 acaacaacaacaaccaagccttatcccactaagttgggtcggct 32978116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 44047529 - 44047568
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  44047529 acaacaacaacaaccaagccttatcccactaagtggggtc 44047568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 3473854 - 3473812
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||| |||||||  ||||||||||||||||||||    
T  3473854 caacaacaacaacaaagccttatcccactaagtggggtcggct 3473812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 10668495 - 10668537
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||| ||||||||    
T  10668495 caacaacaacaaccaagccttatcccactaagtgaggtcggct 10668537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 16918494 - 16918536
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||||  ||||||||||||||| ||||    
T  16918494 caacaacaacaaccaagccttatcccactaagtggggttggct 16918536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 30812814 - 30812856
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||| ||||||||||  ||||||||||||||||||||    
T  30812814 caacaacaaccaccaagccttttcccactaagtggggtcggct 30812856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 36565239 - 36565281
Alignment:
Q  21 caacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||| ||||||  ||||||||||||||||||||    
T  36565239 caacaacaacaaccgagccttatcccactaagtggggtcggct 36565281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 40982893 - 40982935
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcggc 62  Q
    ||||||||||||||||||||||  |||||||| ||||||||||    
T  40982893 acaacaacaacaaccaagccttttcccactaaatggggtcggc 40982935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 41604656 - 41604698
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggctc 64  Q
    ||||||||||||||||||||  ||||||||| |||||||||||    
T  41604656 aacaacaacaaccaagccttaccccactaagcggggtcggctc 41604698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2027815 - 2027778
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtgggg 57  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  2027815 acaacaacaacaaccaagccttatcccactaagtgggg 2027778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 4558207 - 4558248
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||  ||||||||||||||| ||||    
T  4558207 aacaacaacaaccaagccttatcccactaagtggggttggct 4558248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 39953263 - 39953304
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||| |||  ||||||||||||||||||||    
T  39953263 aacaacaacaaccaagtcttatcccactaagtggggtcggct 39953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 4061945 - 4061905
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||   |||||||||||||||||||    
T  4061945 acaacaacaaccaagcctttttccactaagtggggtcggct 4061905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 16008392 - 16008432
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtcg 60  Q
    |||||||||||||||||| |||  |||||||||||||||||    
T  16008392 acaacaacaacaaccaagtcttatcccactaagtggggtcg 16008432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 35646930 - 35646970
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||||||||||||   ||||||||||||||||||    
T  35646930 acaacaacaaccaagccttgttacactaagtggggtcggct 35646970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 25529 - 25568
Alignment:
Q  20 acaacaacaacaaccaagccttgacccactaagtggggtc 59  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  25529 acaacaacaacaaccaagccttatcccactaagtggggtc 25568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 614 - 573
Alignment:
Q  22 aacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    ||||||||||| ||||||||  ||||||||||||||||||||    
T  614 aacaacaacaatcaagccttatcccactaagtggggtcggct 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 16860 - 16820
Alignment:
Q  23 acaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||||||||||||||||||  |||||||||||| |||||||    
T  16860 acaacaacaaccaagccttatcccactaagtggagtcggct 16820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 99278 - 99326
Alignment:
Q  15 aaatcacaacaacaacaaccaagccttgacccactaagtggggtcggct 63  Q
    |||| ||||||||||||||||||||||  ||||||| |||| |||||||    
T  99278 aaataacaacaacaacaaccaagccttatcccactatgtggtgtcggct 99326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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