View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15862_low_5 (Length: 294)
Name: NF15862_low_5
Description: NF15862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15862_low_5 |
 |  |
|
| [»] scaffold0025 (1 HSPs) |
 |  |  |
|
| [»] scaffold0146 (2 HSPs) |
 |  |  |
|
| [»] scaffold0002 (1 HSPs) |
 |  |  |
|
| [»] scaffold0013 (1 HSPs) |
 |  |  |
|
| [»] scaffold0018 (1 HSPs) |
 |  |  |
|
| [»] scaffold0139 (1 HSPs) |
 |  |  |
|
| [»] scaffold0254 (1 HSPs) |
 |  |  |
|
| [»] scaffold0180 (1 HSPs) |
 |  |  |
|
| [»] scaffold0083 (1 HSPs) |
 |  |  |
|
| [»] scaffold0585 (1 HSPs) |
 |  |  |
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| [»] scaffold0096 (1 HSPs) |
 |  |  |
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| [»] scaffold0026 (1 HSPs) |
 |  |  |
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| [»] scaffold0010 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 24 - 279
Target Start/End: Original strand, 16347164 - 16347419
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16347164 |
tacactttgtgtgttgtgaaactttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
16347263 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16347264 |
aaattaaacatcttccttggattgggaacttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
16347363 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaacctatttctgacattcatcaagtggtattca |
279 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || | ||||||||||||||||| |
|
|
| T |
16347364 |
caaaaatacaaaactaaaatttcaacctatttttgtctctcatcaagtggtattca |
16347419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 24 - 248
Target Start/End: Complemental strand, 47418131 - 47417907
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
47418131 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
47418032 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47418031 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
47417932 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaa |
248 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
47417931 |
caaaaatacaaaactaaaatttcaa |
47417907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 2309433 - 2309382
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
2309433 |
tacactttgtgtgttgtgaaactttgcttctttttggttctggattgaacca |
2309382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 16022576 - 16022525
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
16022576 |
tacactttgtgtgttgtgaagctttggttctttatggttctggattgaacca |
16022525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 22271178 - 22271235
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatc |
116 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| ||| |||| |||||||||| |
|
|
| T |
22271178 |
tggttctggattgaaccat-cattgatcttatcaagaaatcacatttcttgtggcgatc |
22271235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 5553518 - 5553578
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
5553518 |
tggttctggattgaaccat-cattgatcttatcaagaaatcatatttcttgtggcgatcctc |
5553578 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0025 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 24 - 268
Target Start/End: Original strand, 55391 - 55635
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
55391 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatctcatcaagaaaccacgtttcttgtggcgatcctctacc |
55490 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
55491 |
aaattaaacatcttccttggattgggaacttgtttggttatcatttctttctatttccaccattcttcactttttattattgtattttatccaacattca |
55590 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaacctatttctgacattcatca |
268 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
55591 |
caaaaatacaaaactaaaatttcaacctatttttgtcattcatca |
55635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 24 - 255
Target Start/End: Complemental strand, 18535457 - 18535226
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18535457 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgtattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
18535358 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18535357 |
aaattaaacatcttccttggattgggaacttgtttggttatcatttctgtctatttccaccattcttcaaattttattattgtattttatccaacattca |
18535258 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaacctattt |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
18535257 |
caaaaatacaaaactaaaatttcaacctattt |
18535226 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 24808292 - 24808125
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24808292 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
24808193 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||| |
|
|
| T |
24808192 |
aaattaaacatcttccttggattgggaatttgtttggttaccattttctgcctatttccatcattctt |
24808125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 44792979 - 44792812
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
44792979 |
tacactttgtgtgttgtgaagctttgcttctttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctatc |
44792880 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
44792879 |
gaattaaacatcttccttggattgggaatttgtttggttatcattttctgcctatttccatcattctt |
44792812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 24806435 - 24806269
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
24806435 |
tacactttgtgtgttgtgaagctttgcttcttttttgttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggtgatcctctacc |
24806336 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
||| |||||||||| |||||||||| |||||||||||||| || |||||| ||||||||| ||||||| |
|
|
| T |
24806335 |
aaa-taaacatctttcttggattggaaatttgtttggttaccattttctgcctatttccatcattctt |
24806269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 244
Target Start/End: Original strand, 31939049 - 31939242
Alignment:
| Q |
54 |
tttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttggattgggaatt |
153 |
Q |
| |
|
||||| ||| ||||||||| || | |||||||||||||||||||| ||||| |||||||||||||||| || || | |||||||||| |||||||| | |
|
|
| T |
31939049 |
tttttagttttggattgaataatactttgatcttatcaagaaaccatgtttcttgtggcgatcctctactaagttgatcatcttccttaaattgggaaat |
31939148 |
T |
 |
| Q |
154 |
tgt-ttggttatcatttctgtcta-tttccaccattcttca-ctttttattattgtattttatccaacattcacaaaaatacaaaactaaaatt |
244 |
Q |
| |
|
||| || | || |||||||||||| |||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
31939149 |
tgtattagctaccatttctgtctattttccaccgttcttcacctttttaatatcatattttatccaacattcacaaaaatacaaaattaaaatt |
31939242 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 22300030 - 22299979
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
22300030 |
tacactttgtgtgttgtgaagctttgcttccttttggttttggattgaacca |
22299979 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 6050328 - 6050268
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
6050328 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
6050268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 15409845 - 15409905
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
15409845 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
15409905 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 17330563 - 17330616
Alignment:
| Q |
24 |
tacactttgtgtgttgtga-agctttg-cttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||| |||||||||||||| ||||||| || ||||||||||||||||||||||| |
|
|
| T |
17330563 |
tacaatttgtgtgttgtgagagctttgtctcctttttggttctggattgaacca |
17330616 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0146 (Bit Score: 209; Significance: 1e-114; HSPs: 2)
Name: scaffold0146
Description:
Target: scaffold0146; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 24 - 276
Target Start/End: Original strand, 7698 - 7950
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
7698 |
tacactttgtgtgttgtgaagttttgcttctttttggttctggattggaccatggattgatcttatcaagaaaccacgtttcttgtggagatcctctacc |
7797 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7798 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttttgtctatttccaccattcttcactttttattattttattttatccaacattca |
7897 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaacctatttctgacattcatcaagtggtat |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || | |||||||||| |||| |
|
|
| T |
7898 |
caaaaatacaaaactaaaatttcaacctatttttgtccttcatcaagtagtat |
7950 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0146; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 27683 - 27734
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27683 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
27734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 24 - 236
Target Start/End: Complemental strand, 374885 - 374673
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
374885 |
tacactttgtgtgttgtgaagctttgcttccttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
374786 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
374785 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
374686 |
T |
 |
| Q |
224 |
caaaaatacaaaa |
236 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
374685 |
caaaattacaaaa |
374673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 24 - 249
Target Start/End: Original strand, 241580 - 241804
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
241580 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcgttgatcttatcaagaaaccacgtttcttgtggtgatcctctacc |
241679 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
241680 |
aaattaaacatcttccttggattgggaatttgtttggttatca-ttctgtctatttccaccattcttcactttttattattgtattttatccaacatcca |
241778 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaac |
249 |
Q |
| |
|
|||| ||||||||||||||||||||| |
|
|
| T |
241779 |
caaatatacaaaactaaaatttcaac |
241804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 24 - 236
Target Start/End: Original strand, 11099011 - 11099223
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| |
|
|
| T |
11099011 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcaatcctttacc |
11099110 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11099111 |
aaattaaacatcttccttggattgagaatttgtttggttatcatttctgtctatttccaccattcttcactttttgttattgtattttatccaacattca |
11099210 |
T |
 |
| Q |
224 |
caaaaatacaaaa |
236 |
Q |
| |
|
||||||||||||| |
|
|
| T |
11099211 |
caaaaatacaaaa |
11099223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 19456494 - 19456607
Alignment:
| Q |
46 |
tttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttggat |
145 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||| ||||||||||||||| || |||||| |||||||||||||||| ||| |||||||||| ||| ||| |
|
|
| T |
19456494 |
tttgcttctttatggttctggattgaatcatgctttgatcttatcaagatacttcgtttcttgtggcgatcctctacgaaactaaacatcttgcttagat |
19456593 |
T |
 |
| Q |
146 |
tgggaatttgtttg |
159 |
Q |
| |
|
|| ||||||||||| |
|
|
| T |
19456594 |
tgagaatttgtttg |
19456607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 178
Target Start/End: Complemental strand, 19460471 - 19460339
Alignment:
| Q |
46 |
tttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttggat |
145 |
Q |
| |
|
||||||| ||| |||||||| ||||||||||| |||||||||||||||||| | ||||| |||| ||| |||||||||| |||||||||||||| ||| |
|
|
| T |
19460471 |
tttgcttatttatggttctgaattgaaccatgttttgatcttatcaagaaactatgtttcttgtgccgaccctctaccaagctaaacatcttccttagat |
19460372 |
T |
 |
| Q |
146 |
tgggaatttgtttggttatcatttctgtctatt |
178 |
Q |
| |
|
|| |||||||||||||| |||||| ||| |||| |
|
|
| T |
19460371 |
tgagaatttgtttggttttcatttatgtttatt |
19460339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 24663531 - 24663403
Alignment:
| Q |
41 |
gaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttcct |
140 |
Q |
| |
|
|||||||| |||||||| |||||| |||||||||||| ||| |||||||||| |||||||||||| |||||||||||||||| || | |||||||||| |
|
|
| T |
24663531 |
gaagctttacttcttttgggttctagattgaaccatgaatttatcttatcaaaaaaccacgtttcttgtggcgatcctctacgaagcaatacatcttcct |
24663432 |
T |
 |
| Q |
141 |
tggattgggaatttgtttggttatcattt |
169 |
Q |
| |
|
|| |||| |||||||||||||| ||||| |
|
|
| T |
24663431 |
tgaattgaaaatttgtttggttaccattt |
24663403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 19459897 - 19460032
Alignment:
| Q |
43 |
agctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttg |
142 |
Q |
| |
|
|||||||||| | | ||||||| ||||||||| | |||||||||| |||||| || ||||| ||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
19459897 |
agctttgcttatctatggttctaaattgaaccaaactttgatcttataaagaaagcatgtttcttgtggcgatcctctaccaagctaaacatctaccttg |
19459996 |
T |
 |
| Q |
143 |
gattgggaatttgtttggttatcatttctgtctatt |
178 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||| |
|
|
| T |
19459997 |
gattgagaatttgtttggtgtccatttctgtctatt |
19460032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 178
Target Start/End: Original strand, 19458196 - 19458331
Alignment:
| Q |
43 |
agctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttg |
142 |
Q |
| |
|
|||||||||||||| || || || ||| |||||||| |||||||||| ||||||| |||||| |||| ||||| | | |||| ||||||||||||||| |
|
|
| T |
19458196 |
agctttgcttctttatgattttgaatttaaccatgctttgatcttataaagaaacttcgtttcttgtgacgatcgtatcccaagctaaacatcttccttg |
19458295 |
T |
 |
| Q |
143 |
gattgggaatttgtttggttatcatttctgtctatt |
178 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| |
|
|
| T |
19458296 |
tattgggaatttgttgggtttccatttctgtctatt |
19458331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 9398770 - 9398719
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9398770 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
9398719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 18280889 - 18280838
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18280889 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
18280838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 42872602 - 42872551
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42872602 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
42872551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 19180547 - 19180479
Alignment:
| Q |
55 |
ttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19180547 |
ttttggttctggattggaccaaattttgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
19180479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 15019388 - 15019328
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
15019388 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
15019328 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 22474279 - 22474395
Alignment:
| Q |
54 |
tttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcg-atcctctaccaaattaaacatcttccttggattgggaat |
152 |
Q |
| |
|
||||| ||||||||||||||||||| || || ||||||| ||| ||||||| |||| || ||||||||| || |||||| ||||||| ||| ||||| |
|
|
| T |
22474279 |
ttttttgttctggattgaaccatgccttaattttatcaaaaaatcacgttttttgtgacgaatcctctactaagctaaacaacttccttaaattaggaat |
22474378 |
T |
 |
| Q |
153 |
ttgtttggttatcattt |
169 |
Q |
| |
|
|| |||| || |||||| |
|
|
| T |
22474379 |
ttatttgattttcattt |
22474395 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 9167231 - 9167291
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
9167231 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
9167291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 15017748 - 15017688
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| | ||||||||||| |
|
|
| T |
15017748 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttatggcgatcctc |
15017688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 39488255 - 39488195
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||| ||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
39488255 |
tggttctggattgaatcatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
39488195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 48463101 - 48463326
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
48463101 |
tacactttgtgtgttgtgaaattttgcttcttttttgttctggattgaaccatt-attgatcttatcaagaaaccacgtttcttgtgacgatcctctacc |
48463199 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48463200 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtcaatttccaccattcttcactttttattattgtattttatccaacattca |
48463299 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaacc |
250 |
Q |
| |
|
||||||||||||||| ||||||||||| |
|
|
| T |
48463300 |
caaaaatacaaaactgaaatttcaacc |
48463326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 24 - 276
Target Start/End: Complemental strand, 48463809 - 48463560
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||| |||||| |
|
|
| T |
48463809 |
tacactttgtgtgttgtgaagctttgcttctttttg-ttctcgattgaaccat-cattgatcttatcaagaaaccacgtttcttgtgtcgatcttctacc |
48463712 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttattattgtattttatccaacattca |
223 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
48463711 |
aaattaaatatcttccttggattgagaatttgtttggttatcatttctctctatttccaccattcttcattttttattattgtattttatccaacattta |
48463612 |
T |
 |
| Q |
224 |
caaaaatacaaaactaaaatttcaacctatttctgacattcatcaagtggtat |
276 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| || | ||||||||||||||| |
|
|
| T |
48463611 |
caaaaatacaaaactaaaatttcaacct-tttttgtccttcatcaagtggtat |
48463560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 40554414 - 40554591
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
|
|
| T |
40554414 |
tacactttgtgtgttgtgaagctttgcttctttgtggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctatc |
40554513 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttatt |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40554514 |
gaattaaacatcttccttggattgggaatttgtttggttatcatttctgtctatttccaccattcttcactttttatt |
40554591 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 20759658 - 20759807
Alignment:
| Q |
42 |
aagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttcctt |
141 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||| ||||||||||||| |||| || ||| | ||||||||||||||||| |||||||||||||| |
|
|
| T |
20759658 |
aagctttgcttctttttggttttggattaaaccatgacttgatcttatcaaaaaactacattttttatggcgatcctctaccaagctaaacatcttcctt |
20759757 |
T |
 |
| Q |
142 |
ggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||| ||||||| |||| || |||| ||||||||||| ||||||| |
|
|
| T |
20759758 |
agattgggattttgtttagttaccattttcggtctatttccatcattctt |
20759807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 31390467 - 31390517
Alignment:
| Q |
25 |
acactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31390467 |
acactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
31390517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 6473408 - 6473459
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
6473408 |
tacactttgtgtgttgtgaagctacgcttctttttggttctggattgaacca |
6473459 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 20127117 - 20127177
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
20127117 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
20127177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 6473820 - 6473880
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||| ||| | ||||||||||||||||| ||| |||| |||| |||||||| |
|
|
| T |
6473820 |
tggttctggattgaatcatcc-ttgatcttatcaagaaatcacatttcttgtgacgatcctc |
6473880 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 22062250 - 22062190
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
22062250 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
22062190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0018 (Bit Score: 144; Significance: 9e-76; HSPs: 1)
Name: scaffold0018
Description:
Target: scaffold0018; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 236 - 69
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
236 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
137 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||| |
|
|
| T |
136 |
aaattaaacatcttccttggattgggaatttgtttggttaccattttctgcctatttccatcattctt |
69 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 144; Significance: 9e-76; HSPs: 8)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 23015904 - 23015737
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
23015904 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
23015805 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||| |
|
|
| T |
23015804 |
aaattaaacatcttccttggattgggaatttgtttggttaccattttctgcctatttccatcattctt |
23015737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 169
Target Start/End: Complemental strand, 6777771 - 6777643
Alignment:
| Q |
41 |
gaagctttgcttctttttg-gttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttcc |
139 |
Q |
| |
|
|||||||||||||||||| ||| || |||||| |||| || ||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||| |
|
|
| T |
6777771 |
gaagctttgcttcttttttagttatg-attgaatcatgacttaatcttatcaagaaaccacgtttcttgtggcgatcctctaccaaactaaacaacttcc |
6777673 |
T |
 |
| Q |
140 |
ttggattgggaatttgtttggttatcattt |
169 |
Q |
| |
|
|||||||| ||||||||||||||| ||||| |
|
|
| T |
6777672 |
ttggattgagaatttgtttggttaccattt |
6777643 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 8366658 - 8366709
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8366658 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
8366709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 17277827 - 17277776
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
17277827 |
tacactttgtgtgttgtgaagctttgcttctttttggttctagattgaacca |
17277776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 285492 - 285364
Alignment:
| Q |
43 |
agctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttg |
142 |
Q |
| |
|
||||||| |||| |||| |||| ||||||| |||| ||||||||||||| |||| | ||||| | || |||||||||||||| | | ||| ||||||| |
|
|
| T |
285492 |
agctttgtttctgtttgattctagattgaatcatgttttgatcttatcaaaaaacaatgtttcttatgacgatcctctaccaagcttatcatattccttg |
285393 |
T |
 |
| Q |
143 |
gattgggaatttgt-ttggttatcatttc |
170 |
Q |
| |
|
||||| |||||||| |||||| ||||||| |
|
|
| T |
285392 |
gattgagaatttgtgttggttttcatttc |
285364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 630385 - 630513
Alignment:
| Q |
43 |
agctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttg |
142 |
Q |
| |
|
||||||| |||| |||| |||| ||||||| |||| ||||||||||||| |||| | ||||| | || |||||||||||||| | | ||| ||||||| |
|
|
| T |
630385 |
agctttgtttctgtttgattctagattgaatcatgttttgatcttatcaaaaaacaatgtttcttatgacgatcctctaccaagcttatcatattccttg |
630484 |
T |
 |
| Q |
143 |
gattgggaatttgt-ttggttatcatttc |
170 |
Q |
| |
|
||||| |||||||| |||||| ||||||| |
|
|
| T |
630485 |
gattgagaatttgtgttggttttcatttc |
630513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 816197 - 816325
Alignment:
| Q |
43 |
agctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaacatcttccttg |
142 |
Q |
| |
|
||||||| |||| |||| |||| ||||||| |||| ||||||||||||| |||| | ||||| | || |||||||||||||| | | ||| ||||||| |
|
|
| T |
816197 |
agctttgtttctgtttgattctagattgaatcatgttttgatcttatcaaaaaacaatgtttcttatgacgatcctctaccaagcttatcatattccttg |
816296 |
T |
 |
| Q |
143 |
gattgggaatttgt-ttggttatcatttc |
170 |
Q |
| |
|
||||| |||||||| |||||| ||||||| |
|
|
| T |
816297 |
gattgagaatttgtgttggttttcatttc |
816325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 20730920 - 20730980
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
20730920 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
20730980 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0139 (Bit Score: 136; Significance: 6e-71; HSPs: 1)
Name: scaffold0139
Description:
Target: scaffold0139; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 6431 - 6598
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6431 |
tacactttgtgtgatgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctacc |
6530 |
T |
 |
| Q |
124 |
aaattaaacatcttccttggattgggaatttgtttggttatc-atttctgtctatttccaccattctt |
190 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||| ||||||| |
|
|
| T |
6531 |
aaattaaacatcttctttggattgggaatttgtttggttaccaatttctgcctatttccatcattctt |
6598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 24396 - 24239
Alignment:
| Q |
34 |
gtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaaca |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24396 |
gtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctaccaaattaaaca |
24297 |
T |
 |
| Q |
134 |
tcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||| |
|
|
| T |
24296 |
tcttccttggattgggaatttgtttggttaccattttctgcctatttccatcattctt |
24239 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 134; Significance: 9e-70; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 2147932 - 2147775
Alignment:
| Q |
34 |
gtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctaccaaattaaaca |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2147932 |
gtgttgtgaagctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctaccaaattaaaca |
2147833 |
T |
 |
| Q |
134 |
tcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||| ||||||||| ||||||| |
|
|
| T |
2147832 |
tcttccttggattgggaatttgtttggttaccattttctgcctatttccatcattctt |
2147775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 30518390 - 30518330
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
30518390 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
30518330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 6230741 - 6230684
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatc |
116 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| ||| |||| | |||||||| |
|
|
| T |
6230741 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcacatttcttatggcgatc |
6230684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 18553383 - 18553443
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
18553383 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
18553443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 18781799 - 18781859
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
18781799 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
18781859 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 20415011 - 20414951
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
20415011 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
20414951 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 20417658 - 20417598
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
20417658 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
20417598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 20419744 - 20419684
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
20419744 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
20419684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0180 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0180
Description:
Target: scaffold0180; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 24 - 190
Target Start/End: Complemental strand, 10946 - 10778
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttcttttt-ggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctac |
122 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10946 |
tacactttgcgtgttgtgaagctttgcttcttttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcttgtggcgatcctctac |
10847 |
T |
 |
| Q |
123 |
caaattaaacatcttccttggattgggaatttgtttggttatca-tttctgtctatttccaccattctt |
190 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || |||||| ||||||||| ||||||| |
|
|
| T |
10846 |
caaattaaacatcttccttgaattgggaatttgtttggttaccattttctgcctatttccatcattctt |
10778 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 35182 - 35131
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35182 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
35131 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 41000231 - 41000180
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41000231 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
41000180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 9595542 - 9595482
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
9595542 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
9595482 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 9646505 - 9646445
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
9646505 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
9646445 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 32706385 - 32706445
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| ||| |||| |||||| |||||| |
|
|
| T |
32706385 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcacatttcttgtggcaatcctc |
32706445 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 12364391 - 12364323
Alignment:
| Q |
55 |
ttttggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctctacc |
123 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||| ||||| |||||| |||||||||||| |||| |
|
|
| T |
12364391 |
ttttggttctggattggaccaaattttgatcttatcaaaaaaccgcgtttcttgtggcgatcctttacc |
12364323 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 38937056 - 38937005
Alignment:
| Q |
24 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
75 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38937056 |
tacactttgtgtgttgtgaagctttgcttctttttggttctggattgaacca |
38937005 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 244546 - 244486
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
244546 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
244486 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 27402111 - 27402167
Alignment:
| Q |
43 |
agctttgcttctttttggttctggattgaaccatgcattgatcttatcaagaaacca |
99 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| |||||||||| || |||||| |
|
|
| T |
27402111 |
agctttgcttcttttttgttctaaattgaaccatgcgttgatcttataaaaaaacca |
27402167 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 4568297 - 4568357
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||| ||| || |||| ||||||||||||| |
|
|
| T |
4568297 |
tggttctggattgaaccattc-ttgatcttatcaaaaaatcatatttcttgtggcgatcctc |
4568357 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 29950163 - 29950223
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
29950163 |
tggttctggattgaaccaacc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
29950223 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0585 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0585
Description:
Target: scaffold0585; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 978 - 917
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctct |
120 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| |||||||||||||| |
|
|
| T |
978 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctct |
917 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 119
Target Start/End: Complemental strand, 22720 - 22660
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
22720 |
tggttctggattgaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
22660 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 87109 - 87162
Alignment:
| Q |
24 |
tacactttgtgtgttgtga-agctttgcttcttttt-ggttctggattgaacca |
75 |
Q |
| |
|
||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |
|
|
| T |
87109 |
tacactttgtgtgttgtgagagctttgtctctttttcggttctggattgaacca |
87162 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 136803 - 136863
Alignment:
| Q |
58 |
tggttctggattgaaccatgcattgatcttatcaagaaaccacgtttcatgtggcgatcctc |
119 |
Q |
| |
|
|||||||||||| |||||| | ||||||||||||||||| || |||| ||||||||||||| |
|
|
| T |
136803 |
tggttctggattaaaccatcc-ttgatcttatcaagaaatcatatttcttgtggcgatcctc |
136863 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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