View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15863_high_7 (Length: 222)
Name: NF15863_high_7
Description: NF15863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15863_high_7 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7559514 - 7559293
Alignment:
| Q |
1 |
tctagccaaaacactgatcagcagggagaggacctggaatgtaaccttgttgaaaatactgcaaaccaaaaacaacaacaatagcaaccaatgccaaata |
100 |
Q |
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| T |
7559514 |
tctagccaaaacactgatcagcagggagaggacctggaatataaccttgttgaaaatactgcaaaccaaaaacaacaacaatagcaaccaatgccaaata |
7559415 |
T |
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| Q |
101 |
tgacaacccttcaacagcacctaataacccaaaaggaccattaggaagaccagaaccagtttttgttttagtatatatagaccaagcaacaatgcccaca |
200 |
Q |
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| T |
7559414 |
tgacaacccttcaacagcacctaataacccaaaaggaccattaggaagaccagaaccagtttttgttttagtatatatagaccaagcaacaatgcccaca |
7559315 |
T |
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| Q |
201 |
acaacaagataacttacacctt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
7559314 |
acaacaagataacttacacctt |
7559293 |
T |
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