View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15863_low_2 (Length: 361)
Name: NF15863_low_2
Description: NF15863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15863_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 6 - 345
Target Start/End: Complemental strand, 45803873 - 45803539
Alignment:
| Q |
6 |
tagattatactgggaaactcatagataatatttgaaccattatgttgtgttatgataatacttgaccattgattgattcttcttcactatataggcaaca |
105 |
Q |
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| T |
45803873 |
tagattctattgggaaactcatagataatatttgaaccattatgttgtgttatgataatacttgaccattgattgattcttcttcactatataggcaaca |
45803774 |
T |
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| Q |
106 |
gcatttggcatgaaaagtgtcgtgtacgtgccgcgaatcaaattagatacggttgcagcattatctgcattctgtgagaaggccagcatggtgagcaagg |
205 |
Q |
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| T |
45803773 |
gcatttggcatgaaaagtgtcgtgtacgtgccgcgaatcaaattagatacggttgcagcattatctgcattctgtgagaaggccagcatggtgagcaagg |
45803674 |
T |
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| Q |
206 |
ggtgagacttatacataaagaacaaatacatggtctacttgaacttaattatgttctcttttctatatattctattctgttgtccattcagtttttcata |
305 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
45803673 |
ggtgagacttatacataaagaacaaatacatggtctacttgaacttaattatgttctcttttctatata-----ttctgttgtccattcagtttttcata |
45803579 |
T |
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| Q |
306 |
ctctatacaaaacaggctttagactaaatctgctactact |
345 |
Q |
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||||||| ||||||||||||||||||||||||||||||| |
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| T |
45803578 |
ttctatacgaaacaggctttagactaaatctgctactact |
45803539 |
T |
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