View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15864_low_59 (Length: 227)

Name: NF15864_low_59
Description: NF15864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15864_low_59
NF15864_low_59
[»] chr5 (50 HSPs)
chr5 (1-227)||(13153672-13153909)
chr5 (114-215)||(4414009-4414110)
chr5 (114-208)||(7577891-7577985)
chr5 (123-220)||(23188752-23188849)
chr5 (114-215)||(31312645-31312746)
chr5 (112-208)||(4561802-4561898)
chr5 (114-208)||(11721348-11721442)
chr5 (96-177)||(31567697-31567778)
chr5 (96-196)||(20355079-20355179)
chr5 (120-168)||(23159555-23159603)
chr5 (96-178)||(18231988-18232071)
chr5 (114-208)||(25233824-25233919)
chr5 (114-208)||(25297984-25298079)
chr5 (114-208)||(22756263-22756357)
chr5 (114-208)||(25962884-25962978)
chr5 (114-208)||(34309509-34309603)
chr5 (114-208)||(41123343-41123437)
chr5 (114-183)||(8855480-8855549)
chr5 (96-165)||(21144189-21144258)
chr5 (114-177)||(31920142-31920205)
chr5 (114-197)||(38874547-38874630)
chr5 (114-208)||(6896983-6897077)
chr5 (114-168)||(12148147-12148201)
chr5 (114-208)||(15885573-15885667)
chr5 (114-215)||(10819543-10819643)
chr5 (114-167)||(29691043-29691096)
chr5 (114-170)||(25088785-25088841)
chr5 (114-170)||(25146754-25146810)
chr5 (114-170)||(42368519-42368575)
chr5 (97-177)||(42778870-42778950)
chr5 (114-157)||(26243183-26243226)
chr5 (114-197)||(28796429-28796512)
chr5 (129-168)||(30907417-30907456)
chr5 (126-168)||(6117680-6117722)
chr5 (114-168)||(17885942-17885996)
chr5 (126-168)||(21039959-21040001)
chr5 (128-225)||(17190784-17190881)
chr5 (114-167)||(23108873-23108926)
chr5 (125-197)||(8861416-8861488)
chr5 (124-168)||(41958927-41958971)
chr5 (173-225)||(42778977-42779027)
chr5 (124-167)||(21125173-21125216)
chr5 (114-177)||(40765466-40765529)
chr5 (114-168)||(30916565-30916619)
chr5 (114-156)||(37217454-37217496)
chr5 (96-148)||(21144023-21144076)
chr5 (114-167)||(27330991-27331044)
chr5 (192-225)||(37869502-37869535)
chr5 (129-197)||(20628131-20628199)
chr5 (114-170)||(42097893-42097949)
[»] chr7 (69 HSPs)
chr7 (96-225)||(45687763-45687893)
chr7 (96-183)||(1853166-1853253)
chr7 (96-225)||(2936262-2936391)
chr7 (96-168)||(43393772-43393844)
chr7 (97-208)||(15011865-15011977)
chr7 (114-197)||(38192772-38192856)
chr7 (96-196)||(9689454-9689555)
chr7 (96-183)||(10931956-10932043)
chr7 (114-208)||(36374228-36374322)
chr7 (123-208)||(10975617-10975702)
chr7 (96-168)||(3092455-3092527)
chr7 (114-177)||(2241085-2241148)
chr7 (114-208)||(3401884-3401979)
chr7 (100-167)||(15635155-15635222)
chr7 (127-197)||(22969259-22969330)
chr7 (127-208)||(2240619-2240701)
chr7 (114-168)||(5864684-5864738)
chr7 (114-168)||(13263951-13264005)
chr7 (114-168)||(21022597-21022651)
chr7 (114-168)||(26254796-26254850)
chr7 (120-194)||(40938204-40938278)
chr7 (123-168)||(17155699-17155744)
chr7 (114-215)||(20055012-20055113)
chr7 (96-224)||(25601874-25602002)
chr7 (114-207)||(31863910-31864003)
chr7 (114-207)||(32946368-32946461)
chr7 (114-197)||(13592789-13592873)
chr7 (96-176)||(42957580-42957660)
chr7 (114-170)||(43707163-43707219)
chr7 (125-208)||(15721023-15721106)
chr7 (99-225)||(27082669-27082795)
chr7 (99-225)||(27195506-27195632)
chr7 (96-167)||(27484820-27484891)
chr7 (123-178)||(28696495-28696550)
chr7 (114-168)||(442617-442671)
chr7 (114-208)||(11576769-11576863)
chr7 (114-168)||(21522008-21522062)
chr7 (114-168)||(31307933-31307987)
chr7 (114-168)||(41380471-41380525)
chr7 (96-208)||(18828664-18828777)
chr7 (114-167)||(30632080-30632133)
chr7 (114-207)||(31749402-31749495)
chr7 (134-207)||(32199961-32200034)
chr7 (96-208)||(33441062-33441175)
chr7 (114-177)||(2300904-2300967)
chr7 (124-167)||(8391055-8391098)
chr7 (134-208)||(10067856-10067931)
chr7 (114-168)||(2514151-2514205)
chr7 (126-208)||(2624770-2624852)
chr7 (114-168)||(12005502-12005556)
chr7 (126-168)||(20164343-20164385)
chr7 (114-208)||(21444064-21444158)
chr7 (134-208)||(31750822-31750896)
chr7 (114-168)||(35158265-35158319)
chr7 (114-168)||(44448403-44448457)
chr7 (114-168)||(47370235-47370289)
chr7 (127-168)||(17051912-17051953)
chr7 (114-167)||(25571176-25571229)
chr7 (100-179)||(15331598-15331677)
chr7 (166-225)||(11625128-11625187)
chr7 (134-213)||(22610196-22610274)
chr7 (127-197)||(17167596-17167666)
chr7 (123-177)||(37913883-37913937)
chr7 (114-168)||(38130917-38130971)
chr7 (126-167)||(14187833-14187874)
chr7 (133-225)||(24812864-24812957)
chr7 (114-167)||(34436698-34436751)
chr7 (173-225)||(9689363-9689415)
chr7 (128-168)||(46146283-46146323)
[»] chr3 (46 HSPs)
chr3 (128-225)||(7308137-7308233)
chr3 (96-177)||(17030593-17030674)
chr3 (114-208)||(3505199-3505293)
chr3 (114-208)||(31293651-31293745)
chr3 (114-207)||(28735525-28735618)
chr3 (114-208)||(7670570-7670664)
chr3 (114-208)||(13049639-13049733)
chr3 (114-208)||(19111140-19111233)
chr3 (123-225)||(23070133-23070235)
chr3 (114-208)||(52839498-52839592)
chr3 (96-177)||(25158853-25158934)
chr3 (125-208)||(300261-300344)
chr3 (114-208)||(5572152-5572246)
chr3 (114-168)||(13041602-13041656)
chr3 (114-208)||(32721706-32721800)
chr3 (127-197)||(52962326-52962396)
chr3 (114-207)||(2985697-2985790)
chr3 (96-177)||(25124986-25125067)
chr3 (123-168)||(38703223-38703268)
chr3 (104-176)||(17582235-17582307)
chr3 (114-208)||(26770118-26770213)
chr3 (114-168)||(13439803-13439857)
chr3 (114-168)||(22817964-22818018)
chr3 (113-167)||(31073897-31073951)
chr3 (114-168)||(48689187-48689241)
chr3 (120-177)||(26932440-26932497)
chr3 (127-204)||(45151719-45151796)
chr3 (96-223)||(7013306-7013434)
chr3 (126-170)||(45007957-45008001)
chr3 (127-177)||(7226166-7226216)
chr3 (114-168)||(14155015-14155069)
chr3 (126-168)||(14220607-14220649)
chr3 (126-168)||(14224834-14224876)
chr3 (114-168)||(14870169-14870223)
chr3 (114-168)||(16897327-16897381)
chr3 (123-177)||(36727826-36727880)
chr3 (96-168)||(18359430-18359503)
chr3 (128-208)||(39218832-39218913)
chr3 (129-225)||(30226198-30226294)
chr3 (186-225)||(17582497-17582536)
chr3 (137-208)||(34314776-34314847)
chr3 (186-225)||(55257779-55257818)
chr3 (96-149)||(5303696-5303750)
chr3 (114-208)||(7272642-7272736)
chr3 (126-168)||(14004503-14004545)
chr3 (141-177)||(30451410-30451446)
[»] chr2 (49 HSPs)
chr2 (96-225)||(35791059-35791189)
chr2 (114-208)||(29949638-29949732)
chr2 (125-208)||(15543912-15543995)
chr2 (125-208)||(38949950-38950033)
chr2 (96-225)||(16590512-16590641)
chr2 (114-208)||(19253482-19253576)
chr2 (102-208)||(15580567-15580673)
chr2 (96-183)||(42223089-42223176)
chr2 (114-168)||(18756588-18756642)
chr2 (114-208)||(33218524-33218618)
chr2 (114-170)||(25103972-25104028)
chr2 (96-168)||(41906055-41906127)
chr2 (114-208)||(7318174-7318269)
chr2 (123-170)||(17188857-17188904)
chr2 (128-207)||(28781821-28781900)
chr2 (114-208)||(9419698-9419792)
chr2 (114-208)||(26498709-26498803)
chr2 (114-215)||(39373076-39373178)
chr2 (123-208)||(16204506-16204591)
chr2 (114-167)||(38127845-38127898)
chr2 (100-222)||(11915086-11915210)
chr2 (114-215)||(17886605-17886708)
chr2 (129-225)||(31989452-31989547)
chr2 (114-170)||(34831574-34831630)
chr2 (114-197)||(2526434-2526517)
chr2 (114-208)||(36525358-36525453)
chr2 (126-168)||(1975721-1975763)
chr2 (126-168)||(18048911-18048953)
chr2 (114-168)||(22846218-22846272)
chr2 (127-208)||(29884011-29884093)
chr2 (123-177)||(41100784-41100838)
chr2 (126-168)||(42794106-42794148)
chr2 (126-168)||(43830741-43830783)
chr2 (114-183)||(7007997-7008066)
chr2 (123-183)||(33315233-33315293)
chr2 (114-197)||(16303831-16303914)
chr2 (133-224)||(31377651-31377742)
chr2 (114-168)||(776513-776567)
chr2 (126-168)||(874448-874490)
chr2 (114-168)||(10071369-10071423)
chr2 (114-208)||(29096829-29096923)
chr2 (114-168)||(39752099-39752153)
chr2 (123-167)||(19272753-19272797)
chr2 (112-225)||(13315928-13316039)
chr2 (134-208)||(36795351-36795426)
chr2 (186-225)||(42223211-42223250)
chr2 (114-168)||(18755263-18755317)
chr2 (114-167)||(30497233-30497286)
chr2 (125-197)||(16260603-16260675)
[»] scaffold0022 (1 HSPs)
scaffold0022 (125-208)||(63230-63313)
[»] chr8 (49 HSPs)
chr8 (125-208)||(12478667-12478750)
chr8 (114-208)||(2873531-2873625)
chr8 (125-208)||(11830269-11830352)
chr8 (99-176)||(23288916-23288993)
chr8 (96-183)||(9235351-9235438)
chr8 (114-208)||(12936334-12936428)
chr8 (114-208)||(32393393-32393487)
chr8 (114-208)||(38703796-38703890)
chr8 (114-208)||(41509580-41509674)
chr8 (114-208)||(30872593-30872688)
chr8 (114-208)||(9305605-9305699)
chr8 (114-168)||(13572622-13572676)
chr8 (114-168)||(29346087-29346141)
chr8 (114-168)||(32684801-32684855)
chr8 (114-168)||(37545130-37545184)
chr8 (96-177)||(14698097-14698178)
chr8 (114-183)||(23245573-23245642)
chr8 (127-208)||(30221866-30221947)
chr8 (127-208)||(35990745-35990826)
chr8 (114-208)||(5566681-5566776)
chr8 (126-208)||(15935585-15935667)
chr8 (114-168)||(23389101-23389155)
chr8 (114-168)||(24331567-24331621)
chr8 (114-168)||(27637307-27637361)
chr8 (114-168)||(34227409-34227463)
chr8 (114-215)||(15568895-15568996)
chr8 (127-208)||(18029707-18029788)
chr8 (114-215)||(24768621-24768722)
chr8 (96-208)||(29211934-29212047)
chr8 (122-167)||(31974930-31974975)
chr8 (134-225)||(24375828-24375919)
chr8 (114-208)||(297691-297785)
chr8 (114-168)||(3156145-3156199)
chr8 (126-168)||(5642803-5642845)
chr8 (126-168)||(5644744-5644786)
chr8 (125-167)||(8626607-8626649)
chr8 (114-168)||(10761506-10761560)
chr8 (128-178)||(26367223-26367272)
chr8 (126-168)||(38711861-38711903)
chr8 (125-197)||(25653913-25653986)
chr8 (129-225)||(28786441-28786538)
chr8 (127-168)||(33958676-33958717)
chr8 (127-168)||(35839453-35839494)
chr8 (124-168)||(13174961-13175005)
chr8 (112-163)||(31343803-31343855)
chr8 (114-157)||(13558582-13558625)
chr8 (127-177)||(8442147-8442197)
chr8 (126-168)||(36637087-36637129)
chr8 (123-208)||(12719272-12719357)
[»] chr6 (40 HSPs)
chr6 (125-208)||(21544224-21544307)
chr6 (125-208)||(1227770-1227853)
chr6 (96-225)||(3816626-3816756)
chr6 (114-208)||(7321959-7322053)
chr6 (114-208)||(22362701-22362795)
chr6 (114-208)||(32216941-32217033)
chr6 (122-168)||(2270543-2270589)
chr6 (114-208)||(9222526-9222620)
chr6 (114-208)||(16659661-16659755)
chr6 (114-167)||(12292945-12292998)
chr6 (97-196)||(9662752-9662851)
chr6 (120-168)||(14291160-14291208)
chr6 (114-208)||(13729134-13729229)
chr6 (114-208)||(26882159-26882254)
chr6 (96-154)||(9044463-9044521)
chr6 (114-168)||(9676459-9676513)
chr6 (114-168)||(17158352-17158406)
chr6 (114-168)||(22495938-22495992)
chr6 (126-168)||(26475857-26475899)
chr6 (114-208)||(34414469-34414563)
chr6 (114-215)||(16119776-16119877)
chr6 (123-208)||(18591318-18591403)
chr6 (96-168)||(10350160-10350232)
chr6 (128-168)||(32603723-32603763)
chr6 (114-177)||(8237721-8237784)
chr6 (114-165)||(9234927-9234978)
chr6 (114-208)||(686490-686584)
chr6 (96-177)||(20757498-20757580)
chr6 (114-168)||(29942608-29942662)
chr6 (123-168)||(10343589-10343634)
chr6 (123-208)||(18592102-18592187)
chr6 (114-178)||(3108710-3108774)
chr6 (114-177)||(10546092-10546155)
chr6 (186-225)||(25167039-25167078)
chr6 (103-168)||(11197723-11197789)
chr6 (123-197)||(25070528-25070602)
chr6 (126-168)||(33708791-33708833)
chr6 (114-182)||(13462702-13462770)
chr6 (96-167)||(33199995-33200067)
chr6 (144-208)||(34077544-34077608)
[»] chr1 (42 HSPs)
chr1 (114-225)||(13436932-13437042)
chr1 (114-205)||(47231199-47231290)
chr1 (96-165)||(1701162-1701231)
chr1 (114-208)||(26190813-26190907)
chr1 (96-225)||(44228339-44228468)
chr1 (96-208)||(9240531-9240644)
chr1 (141-225)||(16639613-16639698)
chr1 (127-197)||(21881297-21881368)
chr1 (114-208)||(47641883-47641978)
chr1 (114-208)||(5932044-5932138)
chr1 (126-168)||(20158888-20158930)
chr1 (114-168)||(22387414-22387468)
chr1 (114-208)||(41189919-41190013)
chr1 (96-168)||(33864115-33864188)
chr1 (96-168)||(33916734-33916807)
chr1 (114-177)||(45195622-45195685)
chr1 (126-168)||(9209669-9209711)
chr1 (114-208)||(14909957-14910051)
chr1 (114-168)||(23161908-23161962)
chr1 (126-167)||(26399096-26399137)
chr1 (96-168)||(5469355-5469427)
chr1 (101-177)||(25060019-25060095)
chr1 (121-168)||(31883550-31883597)
chr1 (126-168)||(5457175-5457217)
chr1 (114-168)||(21770837-21770891)
chr1 (114-168)||(30147148-30147202)
chr1 (127-206)||(21853728-21853808)
chr1 (100-151)||(17890292-17890343)
chr1 (114-197)||(44961088-44961171)
chr1 (126-168)||(6284417-6284459)
chr1 (96-149)||(7261533-7261587)
chr1 (114-168)||(15336733-15336787)
chr1 (114-168)||(16420995-16421049)
chr1 (114-168)||(27665999-27666053)
chr1 (124-177)||(22152076-22152129)
chr1 (96-148)||(22315210-22315263)
chr1 (96-144)||(33864272-33864321)
chr1 (96-144)||(33916601-33916650)
chr1 (123-164)||(46529003-46529044)
chr1 (100-168)||(12126197-12126265)
chr1 (96-140)||(17890132-17890176)
chr1 (173-225)||(25059940-25059992)
[»] scaffold0002 (2 HSPs)
scaffold0002 (114-208)||(332146-332240)
scaffold0002 (123-197)||(432603-432677)
[»] chr4 (53 HSPs)
chr4 (100-221)||(21744798-21744920)
chr4 (125-208)||(49166739-49166822)
chr4 (114-195)||(25244571-25244652)
chr4 (112-208)||(31226380-31226476)
chr4 (96-196)||(13555831-13555932)
chr4 (114-208)||(50773371-50773466)
chr4 (114-208)||(18510065-18510159)
chr4 (114-208)||(42056061-42056155)
chr4 (114-208)||(32682369-32682464)
chr4 (114-208)||(52194362-52194457)
chr4 (114-168)||(3652353-3652407)
chr4 (114-168)||(17696303-17696357)
chr4 (114-168)||(30919000-30919054)
chr4 (127-215)||(2032606-2032695)
chr4 (96-225)||(9780467-9780599)
chr4 (123-168)||(39133176-39133221)
chr4 (96-183)||(8809943-8810030)
chr4 (114-208)||(18165087-18165182)
chr4 (126-168)||(7913351-7913393)
chr4 (121-167)||(12388174-12388220)
chr4 (126-168)||(21507920-21507962)
chr4 (126-168)||(22854058-22854100)
chr4 (114-208)||(23184839-23184932)
chr4 (114-168)||(32681936-32681990)
chr4 (114-168)||(49296240-49296294)
chr4 (96-225)||(16734144-16734276)
chr4 (127-167)||(26040746-26040786)
chr4 (123-167)||(50719681-50719725)
chr4 (114-177)||(14121476-14121539)
chr4 (127-178)||(46088143-46088194)
chr4 (123-177)||(5283692-5283746)
chr4 (114-168)||(5514594-5514648)
chr4 (114-168)||(39152039-39152093)
chr4 (126-168)||(41325451-41325493)
chr4 (114-168)||(50604110-50604164)
chr4 (96-144)||(25786231-25786280)
chr4 (127-208)||(29104256-29104337)
chr4 (114-183)||(40568225-40568294)
chr4 (120-208)||(14946046-14946134)
chr4 (114-178)||(30409334-30409398)
chr4 (133-168)||(16589082-16589117)
chr4 (114-208)||(17251328-17251423)
chr4 (96-155)||(42161280-42161339)
chr4 (97-167)||(49277860-49277931)
chr4 (114-168)||(14574753-14574807)
chr4 (114-168)||(24675362-24675416)
chr4 (102-167)||(31031611-31031677)
chr4 (109-170)||(38926060-38926122)
chr4 (96-148)||(5283847-5283900)
chr4 (135-168)||(15785998-15786031)
chr4 (96-168)||(29700563-29700636)
chr4 (114-167)||(31856976-31857029)
chr4 (173-225)||(13555740-13555792)
[»] scaffold0142 (1 HSPs)
scaffold0142 (96-196)||(34960-35060)
[»] scaffold0430 (1 HSPs)
scaffold0430 (122-168)||(12722-12768)
[»] scaffold0289 (1 HSPs)
scaffold0289 (114-208)||(6807-6901)
[»] scaffold0004 (3 HSPs)
scaffold0004 (114-168)||(212595-212649)
scaffold0004 (96-167)||(82212-82283)
scaffold0004 (186-225)||(82333-82372)
[»] scaffold0258 (1 HSPs)
scaffold0258 (123-168)||(18839-18884)
[»] scaffold0121 (1 HSPs)
scaffold0121 (114-208)||(12550-12644)
[»] scaffold1462 (1 HSPs)
scaffold1462 (123-208)||(204-289)
[»] scaffold0067 (1 HSPs)
scaffold0067 (186-225)||(25866-25905)
[»] scaffold0010 (1 HSPs)
scaffold0010 (123-197)||(145100-145174)
[»] scaffold0154 (1 HSPs)
scaffold0154 (127-168)||(9316-9357)
[»] scaffold0026 (1 HSPs)
scaffold0026 (123-197)||(84265-84339)
[»] scaffold0005 (1 HSPs)
scaffold0005 (114-168)||(242568-242622)


Alignment Details
Target: chr5 (Bit Score: 114; Significance: 6e-58; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 13153909 - 13153672
Alignment:
Q  1 ttgcaaattttagagaaaaagaaataagaaaccaattagtaaagaaaagggttaatatatgtttacccatgt-----tcgg-----tttactcctgtnnn 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     | ||     |||||||||||       
T  13153909 ttgcaaattttagagaaaaagaaataagaaaccaattagtaaagaaaagggttaatatatgtttacccatgtaatattagggattgtttactcctgtaaa 13153810  T
Q  91 nnnnn-ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaa 189  Q
          || |||||||| ||||||  |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||  ||||    
T  13153809 aaaaagttttttagatttcaatccaataagttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcaattatatggcagggggtaaa 13153710  T
Q  190 ccgaaattctctcaaattataaggggcgaaagtaccgt 227  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  13153709 ccgaaattctctcaaattacaagggacgaaagtaccgt 13153672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 4414009 - 4414110
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||  ||||  |||||||||||| |||||||||| ||||    
T  4414009 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaatatatggcagggggtaaaccgaaattttctcaaattacaagg 4414108  T
Q  214 gg 215  Q
    ||    
T  4414109 gg 4414110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 7577985 - 7577891
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||| | ||  ||||||||||||  |||||||||    
T  7577985 tgtaatttaaagatttttggttttggaccttcatgaattttgacggtacaaaatcaaagatatgacatggggtaaaccgaaatttgctcaaatta 7577891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 23188849 - 23188752
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaa 220  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| |  |||||| ||||  ||||||||||||  ||||||||| |||||| ||||    
T  23188849 aagatttttggttttagaccttcatgaattttgacagtacaaaatcgaagatatgacagggggtaaaccgaaatttgctcaaattacaaggggtgaaa 23188752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 31312746 - 31312645
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| |||||||||| |  |||||| ||||  ||||||||||||  ||||||||| ||||    
T  31312746 tgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatcgaagatatgacagggggtaaaccgaaatttgctcaaattacaagg 31312647  T
Q  214 gg 215  Q
    ||    
T  31312646 gg 31312645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 4561898 - 4561802
Alignment:
Q  112 cctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||| || |||||||||||||||||| |||||||||||||| | |||||||||| |  |||||||||||  ||||||||||||  |||||||||    
T  4561898 cctgtaatttgaagatttttggttttggatcttcatgaattttggctgtacaaaatcgaagatatgatagggggtaaaccgaaatttgctcaaatta 4561802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 11721348 - 11721442
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  11721348 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 11721442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 31567697 - 31567778
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||| ||  | ||||| || |||||||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  31567697 ttgtttagatttcatccttgtaatttgaagatttttggttttggaccttcaagaattttgactgtacaaaatcaatgatatg 31567778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 196
Target Start/End: Original strand, 20355079 - 20355179
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaa 195  Q
    |||||| |||| |||  |||||| || |||||||||||||||| |||||||||||||||||| |||||||||| || ||||| |||||  |||||| |||    
T  20355079 ttgttttgatttcaacactgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatcgatgatatggtagggggtaaaccaaaa 20355178  T
Q  196 t 196  Q
    |    
T  20355179 t 20355179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 23159555 - 23159603
Alignment:
Q  120 ttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23159555 ttaaagatttttggttttggaccttcatgaattttgacggtacaaaatc 23159603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 18232071 - 18231988
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatga 178  Q
    ||||||| ||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||  ||||||||| || ||||||    
T  18232071 ttgtttatattccaaccctgtaatttaaagattctttggttttgaaccttcatgaattttgactctacaaaatcgataatatga 18231988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 25233919 - 25233824
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  | |||  ||||||||||||| |||||||||    
T  25233919 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatggcagggggttaaaccgaaattcgctcaaatta 25233824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 25298079 - 25297984
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  | |||  ||||||||||||| |||||||||    
T  25298079 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatggcagggggttaaaccgaaattcgctcaaatta 25297984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 22756357 - 22756263
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||  |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  22756357 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 22756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 25962884 - 25962978
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||  |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  25962884 tgtaatttgaagatttttggttttggaccttcatgaattttgatagtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 25962978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 34309603 - 34309509
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||| |||||||||| || |||||| ||||  |||| | ||||| ||||||||||    
T  34309603 tgtaatttgaagttttttagttttggaccttcatgaattttgactgtacaaaatcgatgatatgacagggggtaaatcaaaattttctcaaatta 34309509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 41123437 - 41123343
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||| ||| |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  41123437 tgtaatttgaagatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 41123343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 8855480 - 8855549
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||    
T  8855480 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggtaggg 8855549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 21144258 - 21144189
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaa 165  Q
    ||||||||||||||| | ||||| || ||||||||| | |||||||||||||||||||| ||||||||||    
T  21144258 ttgtttagattccaaccttgtaatttgaagatttttaggtttggaccttcatgaattttaaccgtacaaa 21144189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 31920142 - 31920205
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  31920142 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgataatatg 31920205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 38874630 - 38874547
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||| || ||||||||||||||||||||||||||||| ||  | |||||||||| |  |||||||||||  ||||||||||||    
T  38874630 tgtaatttgaagatttttggttttggaccttcatgaatgttagctgtacaaaatcgaagatatgatagggggtaaaccgaaatt 38874547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 6897077 - 6896983
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||| ||||||||||||||| ||||||||  |||||||||| |  |||||| ||||  ||||||||||||  |||||||||    
T  6897077 tgtaatttgaagattttttgttttggaccttcataaattttgatagtacaaaatcgaagatatgacagggggtaaaccgaaatttgctcaaatta 6896983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 12148201 - 12148147
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12148201 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 12148147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 15885667 - 15885573
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| |||||  ||||||||||||||||||| ||||||||||   |||||||||||| |||||  ||||  ||||||||||||  |||||||||    
T  15885667 tgtaatttaaaattttttggttttggaccttcttgaattttgattctacaaaatcaatgatatggcagggggtaaaccgaaatttgctcaaatta 15885573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 10819643 - 10819543
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || ||| |||||||||| ||||||||||||||||| ||||||||||||| |  |||||  ||||  |||| ||||||| |||||||||| ||||    
T  10819643 tgtaatttgaagttttttggttt-ggaccttcatgaatttttaccgtacaaaatcgaagatatggcagggggtaaatcgaaattttctcaaattacaagg 10819545  T
Q  214 gg 215  Q
    ||    
T  10819544 gg 10819543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 29691043 - 29691096
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    |||||||| ||||||||| |||||||||||||||||||||||||  ||||||||    
T  29691043 tgtaagttgaagattttttgttttggaccttcatgaattttgactttacaaaat 29691096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 25088841 - 25088785
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  25088841 tgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatcaa 25088785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 25146810 - 25146754
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  25146810 tgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatcaa 25146754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 42368519 - 42368575
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||| ||||||||||||    
T  42368519 tgtaatttgaagattttttgttttggcccttcatgaattttgactgtacaaaatcaa 42368575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 177
Target Start/End: Original strand, 42778870 - 42778950
Alignment:
Q  97 tgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||||||  |||||| || |||| ||| ||||||  |||||||||||||||| | ||||||||||||| |||||    
T  42778870 tgtttagattccaactctgtaatttgaagaatttcggttttaaaccttcatgaattttggctgtacaaaatcaatgatatg 42778950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 26243183 - 26243226
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgac 157  Q
    ||||| || |||||||||||||||||||||||||||||||||||    
T  26243183 tgtaatttgaagatttttggttttggaccttcatgaattttgac 26243226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 28796429 - 28796512
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||| || |||||||||||||||| ||||||||||||||||||| || |||||| |  |||||  ||||  ||||||||||||    
T  28796429 tgtaatttgaagatttttggttttgaaccttcatgaattttgaccatataaaatcgaagatatgggagggggtaaaccgaaatt 28796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 168
Target Start/End: Original strand, 30907417 - 30907456
Alignment:
Q  129 tttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  30907417 tttggttttggaccttcatgaattttgacagtacaaaatc 30907456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 6117680 - 6117722
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  6117680 atttttggttttggaccttcaagaattttgactgtacaaaatc 6117722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 17885996 - 17885942
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||| |||||||||||||| ||||||||||||||| ||||||||||    
T  17885996 tgtaatttgaagaattttggttttggactttcatgaattttgacagtacaaaatc 17885942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 21039959 - 21040001
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||| ||||||||||||||||||||||||| ||||||||||    
T  21039959 attttttgttttggaccttcatgaattttgactgtacaaaatc 21040001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 17190784 - 17190881
Alignment:
Q  128 ttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||||| || ||||||||||||||||||| |||||||||| || |||||| || |  | || | |||||| ||| ||||| |||||| |||||||||    
T  17190784 ttttggtgttagaccttcatgaattttgactgtacaaaatcgatgatatgacagagtgttaatcaaaattcgctctaattacaaggggtgaaagtacc 17190881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 23108926 - 23108873
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||||||| ||||||| ||||||||||||||||||| |||||||||    
T  23108926 tgtaatttgaagatttatggttttagaccttcatgaattttgactgtacaaaat 23108873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 8861488 - 8861416
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    |||||||| |||| ||||||||||||||||||| |||||||||| |  |||||  ||||  ||||||||||||    
T  8861488 gatttttgattttagaccttcatgaattttgactgtacaaaatcgaagatatggcagggggtaaaccgaaatt 8861416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 41958927 - 41958971
Alignment:
Q  124 agatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||    
T  41958927 agatttctggttttggacctttatgaattttgacagtacaaaatc 41958971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 225
Target Start/End: Original strand, 42778977 - 42779027
Alignment:
Q  173 atatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||| ||||||||||||||||||||||| || |||||||||||||    
T  42778977 atatgataggga-taaaccgaaattctctcaaattacaa-gggcgaaagtacc 42779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 21125173 - 21125216
Alignment:
Q  124 agatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    |||||| | ||||||||||||||||||||||||| |||||||||    
T  21125173 agatttctagttttggaccttcatgaattttgactgtacaaaat 21125216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 40765466 - 40765529
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || ||| ||||||||||||||||||||||||||||||  || ||||||| || |||||    
T  40765466 tgtaatttgaagttttttggttttggaccttcatgaattttgattgttcaaaatcgatgatatg 40765529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 30916565 - 30916619
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||||||||  |||||||||||||||||  ||||||||||    
T  30916565 tgtaatttgaagatttttggttttataccttcatgaattttgattgtacaaaatc 30916619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 156
Target Start/End: Complemental strand, 37217496 - 37217454
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttga 156  Q
    ||||| || ||||||||||||||||||||||||| ||||||||    
T  37217496 tgtaatttgaagatttttggttttggaccttcataaattttga 37217454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 21144023 - 21144076
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaaga-tttttggttttggaccttcatg 148  Q
    ||||||||||||||| ||||||| || |||| |||||| |||||||||||||||    
T  21144023 ttgtttagattccaaccctgtaatttgaagattttttgattttggaccttcatg 21144076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 27330991 - 27331044
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||| ||||||||||| |||||| |||||||||||| |||||||||    
T  27330991 tgtaatttgaagttttttggttttagacctttatgaattttgactgtacaaaat 27331044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 37869502 - 37869535
Alignment:
Q  192 gaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||||||||||||||||||||||| ||||||||    
T  37869502 gaaattctctcaaattataaggggcaaaagtacc 37869535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 20628199 - 20628131
Alignment:
Q  129 tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    |||||||||| || ||||||||||||||  |||||||||| || || ||  |||| |||||||||||||    
T  20628199 tttggttttgaacattcatgaattttgatagtacaaaatcgatgatttggcaggggataaaccgaaatt 20628131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 42097949 - 42097893
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||| || |||||||||||||||||||  || |||||||||||  |||||||||||    
T  42097949 tgtaatttgaagatttttggttttggactgtcgtgaattttgacattacaaaatcaa 42097893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 45687893 - 45687763
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    ||||||||||| ||| | | ||| || |||||| ||| ||||| |||||||||||||||||||||||||||||| || |||||| |||| ||||||| ||    
T  45687893 ttgtttagatttcaaccttataatttgaagattatttcgttttagaccttcatgaattttgaccgtacaaaatcgatgatatgacaggggataaaccaaa 45687794  T
Q  195 attctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||||||| |||| |||||||||    
T  45687793 attctctcaaattatagggggtgaaagtacc 45687763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 1853166 - 1853253
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||||||||||| | ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| || |||||| ||||    
T  1853166 ttgtttagattcccaccctgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgacaggg 1853253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 2936391 - 2936262
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    ||||||||||| ||| | ||||| || |||||| ||||||||| ||||||||| ||||||||| |||||||||| || |||||| ||||  |||||| ||    
T  2936391 ttgtttagatttcaaccatgtaatttgaagattctttggttttcgaccttcataaattttgactgtacaaaatcgatgatatgacagggg-taaacccaa 2936293  T
Q  195 attctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||||| | ||||||||||||||    
T  2936292 attctctcaaattacagggggcgaaagtacc 2936262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 43393772 - 43393844
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||| ||||| ||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  43393772 ttgtttagaatccaaccctgtaatttaaagatttttggtttttgacattcatgaattttgaccgtacaaaatc 43393844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 208
Target Start/End: Original strand, 15011865 - 15011977
Alignment:
Q  97 tgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaa 195  Q
    |||||||||| ||| ||||||| || |||||| |||||||||| |||| ||||||||||||| |||||||||| || |||||  || |  ||||||||||    
T  15011865 tgtttagatttcaaccctgtaatttgaagattctttggttttgaacctgcatgaattttgacggtacaaaatcgatgatatggcagagggtaaaccgaaa 15011964  T
Q  196 ttctctcaaatta 208  Q
    |||||||||||||    
T  15011965 ttctctcaaatta 15011977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 38192856 - 38192772
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaatt 197  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||  ||||||||||||    
T  38192856 tgtaatttgaagttttttggttttggaccttcatgaattttgacagtacaaaatcaatgatatggtagggaggtaaaccgaaatt 38192772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 9689555 - 9689454
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg--atagggaataaaccga 193  Q
    ||||||||||| ||| ||||||| | |||||||||||||||||| |||||||||||| |||| |||||||||| || |||||  |||||| |||||||||    
T  9689555 ttgtttagatttcaaccctgtaattcaaagatttttggttttggtccttcatgaattatgactgtacaaaatcgatgatatggcataggg-ataaaccga 9689457  T
Q  194 aat 196  Q
    |||    
T  9689456 aat 9689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 10931956 - 10932043
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||||||||| ||| ||||||| || |||| |||||||||||||||||||||||||||||  |||||||||| || |||||| ||||    
T  10931956 ttgtttagatttcaaccctgtaatttgaagaattttggttttggaccttcatgaattttgattgtacaaaatcgatgatatgacaggg 10932043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 36374228 - 36374322
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||  ||||||||||||  |||||  ||||| ||||||| ||||  |||||||||    
T  36374228 tgtaatttgaagatttttggttttggaccttcatgaattttgatagtacaaaatcaaagatatggcagggagtaaaccggaatttgctcaaatta 36374322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 10975617 - 10975702
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||| ||| |||||||| |||||| |||||||||| || |||||||||||  ||||||||||||  |||||||||    
T  10975617 aagatttttggttttcgactttcatgaactttgacagtacaaaatcgatgatatgatagggggtaaaccgaaatttgctcaaatta 10975702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 3092527 - 3092455
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||| ||||||| || ||||||||||  ||||||||||||| ||||||||| ||||||||||    
T  3092527 ttgtttagattccaaccctgtaatttgaagatttttgtatttggaccttcattaattttgactgtacaaaatc 3092455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 2241148 - 2241085
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||||||||||| || |||||    
T  2241148 tgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatcgataatatg 2241085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 3401884 - 3401979
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  | |||  ||||||||||||| |||||||||    
T  3401884 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatgtcagggggctaaaccgaaattcactcaaatta 3401979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 15635155 - 15635222
Alignment:
Q  100 ttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| ||||| ||||||| || |||||||||||||||||||||||||||||||| |||||| |||||    
T  15635155 ttagaatccaaccctgtaatttgaagatttttggttttggaccttcatgaattttaaccgtataaaat 15635222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 22969330 - 22969259
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaatt 197  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||  ||||||||||||    
T  22969330 tttttggttttggaccttcatgaactttgacagtacaaaatcaatgatatggtagggaggtaaaccgaaatt 22969259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 2240701 - 2240619
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||  | |||  |||||||||||| ||||||||||    
T  2240701 tttttggttttggaccttcatgaattttgacggtacaaaatcgatgatatggcaggggggtaaaccgaaattttctcaaatta 2240619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 5864738 - 5864684
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  5864738 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 5864684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 13263951 - 13264005
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  13263951 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 13264005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 21022651 - 21022597
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  21022651 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 21022597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 26254850 - 26254796
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  26254850 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 26254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 194
Target Start/End: Original strand, 40938204 - 40938278
Alignment:
Q  120 ttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||| |  |||||  |||| ||||||||||    
T  40938204 ttaaagatttttggttttagaccttcatgaattttgacagtacaaaatcgaaaatatggcaggggataaaccgaa 40938278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 17155699 - 17155744
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17155699 aagatttttggttttggaccttcatgaattttgactgtacaaaatc 17155744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 20055113 - 20055012
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || ||||||||||||||||||| ||||||||||||||| |||||||||  |  |||||| || |  ||||||||||||  ||||||||| ||||    
T  20055113 tgtaatttgaagatttttggttttggactttcatgaattttgactgtacaaaattgaagatatgacagagggtaaaccgaaatttgctcaaattacaagg 20055014  T
Q  214 gg 215  Q
    ||    
T  20055013 gg 20055012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 224
Target Start/End: Complemental strand, 25602002 - 25601874
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagattttt-ggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    ||||||||||||||||||||||| || ||||||||| ||||||  || ||||||||||||||| |||||| ||  || |||| | | ||  | |||||||    
T  25602002 ttgtttagattccaatcctgtaatttgaagatttttcggttttaaacattcatgaattttgactgtacaatattgatgatataacatgg-gtgaaccgaa 25601904  T
Q  195 attctctcaaattataaggggcgaaagtac 224  Q
    ||||||| |||||| | |||||||||||||    
T  25601903 attctctaaaattacagggggcgaaagtac 25601874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 31864003 - 31863910
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatt 207  Q
    ||||| || ||| ||||||||||||||||||||||||| ||||| |||||||||| || |||||| | ||  ||||||||||||  ||||||||    
T  31864003 tgtaatttgaagttttttggttttggaccttcatgaatcttgactgtacaaaatcgatgatatgacaaggggtaaaccgaaatttgctcaaatt 31863910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 32946368 - 32946461
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatt 207  Q
    ||||| || ||| |||||||||||||||||||||||||||| || |||||||||| || |||||  ||||  |||||||||||| | |||||||    
T  32946368 tgtaatttgaagttttttggttttggaccttcatgaattttaactgtacaaaatcgatgatatggcagggggtaaaccgaaattttttcaaatt 32946461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 13592789 - 13592873
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaatt 197  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||  ||||||||||||    
T  13592789 tgtaatttgaagtttttttgttttggaccttcatgaattttgacagtataaaatcaatgatatggtagggaggtaaaccgaaatt 13592873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 42957660 - 42957580
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatat 176  Q
    |||||| ||||| || ||||||| || ||||||||||||||| |||||||||||| |||||  ||||||||||||| ||||    
T  42957660 ttgtttggattctaaccctgtaatttgaagatttttggttttcgaccttcatgaactttgattgtacaaaatcaatgatat 42957580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 43707219 - 43707163
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43707219 tgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatcaa 43707163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 15721023 - 15721106
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| | |||||||| |  |||||||||||  |||||  |||||  |||||||||    
T  15721023 gatttttggttttggaccttcatgaattttgacagcacaaaatcgaagatatgatagggggtaaacataaatttgctcaaatta 15721106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 225
Target Start/End: Complemental strand, 27082795 - 27082669
Alignment:
Q  99 tttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    |||||||||||| ||||||| || |||||| ||||||||| |||||| |||||||||||| | |  ||||| || |||||  ||||  |||||| |||||    
T  27082795 tttagattccaaccctgtaatttgaagattatttggttttagacctttatgaattttgactgga-taaatcgataatatggcagggggtaaaccaaaatt 27082697  T
Q  198 ctctcaaattataaggggcgaaagtacc 225  Q
     |||||||||| | ||||||||||||||    
T  27082696 atctcaaattacagggggcgaaagtacc 27082669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 99 - 225
Target Start/End: Original strand, 27195506 - 27195632
Alignment:
Q  99 tttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    |||||||||||| ||||||| || |||||| ||||||||| |||||| |||||||||||| | |  ||||| || |||||  ||||  |||||| |||||    
T  27195506 tttagattccaaccctgtaatttgaagattatttggttttagacctttatgaattttgactgga-taaatcgataatatggcagggggtaaaccaaaatt 27195604  T
Q  198 ctctcaaattataaggggcgaaagtacc 225  Q
     |||||||||| | ||||||||||||||    
T  27195605 atctcaaattacagggggcgaaagtacc 27195632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 27484820 - 27484891
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||||| ||| | ||||| || |||||||||| ||||||| |||||||||||||||| |||||||||    
T  27484820 ttgtttagatttcaaccatgtaatttgaagatttttgattttggatcttcatgaattttgactgtacaaaat 27484891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 123 - 178
Target Start/End: Original strand, 28696495 - 28696550
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatga 178  Q
    ||||||||||||||| ||| |||||||| |||||||||||||||||||| ||||||    
T  28696495 aagatttttggtttttgacattcatgaactttgaccgtacaaaatcaatgatatga 28696550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 442617 - 442671
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  442617 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 442671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 11576863 - 11576769
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| |||| ||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  11576863 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacgaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 11576769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 21522062 - 21522008
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  21522062 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 21522008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 31307933 - 31307987
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  31307933 tgtaatttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 31307987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 41380471 - 41380525
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||| ||||||||| |||||||||||||||||||||||||  |||||||||    
T  41380471 tgtaagttgaagattttttgttttggaccttcatgaattttgacattacaaaatc 41380525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 18828664 - 18828777
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaa-taaaccgaa 194  Q
    |||||||| |||||  | ||||| |||||||||| ||||||||||||||||| |||||| ||  ||||||||  || ||||| ||||||| |||| ||||    
T  18828664 ttgtttagtttccatccttgtaatttaaagatttctggttttggaccttcataaattttcactatacaaaatagatgatatggtagggaagtaaatcgaa 18828763  T
Q  195 attctctcaaatta 208  Q
    |||  |||||||||    
T  18828764 atttgctcaaatta 18828777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 30632080 - 30632133
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||||||||||||||||||||||||||||||||||| | |||||||    
T  30632080 tgtaatttgaagatttttggttttggaccttcatgaattttgactgcacaaaat 30632133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 31749402 - 31749495
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatt 207  Q
    ||||| || ||| |||||||||||||||||||||||||||||||  ||||||||| || |||||  ||||  |||| |||||||  ||||||||    
T  31749402 tgtaatttgaagttttttggttttggaccttcatgaattttgactatacaaaatcgatgatatggcagggggtaaatcgaaatttgctcaaatt 31749495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 32200034 - 32199961
Alignment:
Q  134 ttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatt 207  Q
    ||||||||||||||||| |||||| |||||||||| || ||||| |||||  ||||||||||||  ||||||||    
T  32200034 ttttggaccttcatgaactttgactgtacaaaatcgatgatatggtagggggtaaaccgaaatttgctcaaatt 32199961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Complemental strand, 33441175 - 33441062
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaa 194  Q
    |||||||| |||||  | ||||| || ||||||| ||||||||||||||||||||||||||  |||||||||  || ||||| ||  ||| |||||||||    
T  33441175 ttgtttagtttccatccttgtaatttgaagatttctggttttggaccttcatgaattttgattgtacaaaatagatgatatggtacaggagtaaaccgaa 33441076  T
Q  195 attctctcaaatta 208  Q
    |||  |||||||||    
T  33441075 atttgctcaaatta 33441062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 2300904 - 2300967
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || |||||| ||| |||||||||||||||||||||||| |||||||||| || |||||    
T  2300904 tgtaatttgaagattcttgattttggaccttcatgaattttgactgtacaaaatcgatgatatg 2300967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 167
Target Start/End: Original strand, 8391055 - 8391098
Alignment:
Q  124 agatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||| |||||||||||||||||||||||| |||||||||    
T  8391055 agatttttgattttggaccttcatgaattttgactgtacaaaat 8391098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 10067856 - 10067931
Alignment:
Q  134 ttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    |||||||||||||| |||||||||||||||||||| || |||||  | |||| ||||||||||||  |||||||||    
T  10067856 ttttggaccttcataaattttgaccgtacaaaatcgatgatatggcaggggagtaaaccgaaatttgctcaaatta 10067931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 2514205 - 2514151
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||| |||||||||||| ||||||||||| ||||||||||    
T  2514205 tgtaatttgaagatttttgattttggaccttcgtgaattttgactgtacaaaatc 2514151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 2624852 - 2624770
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||| |||||||||||||||||  |||||||||| |  |||||| || | |||||| ||||||  |||||||||    
T  2624852 atttttggttttgtaccttcatgaattttgattgtacaaaatcgaagatatgacagaggataaactgaaatttgctcaaatta 2624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 12005556 - 12005502
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  12005556 tgtaacttgaagattttttgttttggactttcatgaattttgactgtacaaaatc 12005502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 20164385 - 20164343
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||| |||||||||||| ||||||||||    
T  20164385 atttttggttttggaccttaatgaattttgactgtacaaaatc 20164343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 21444158 - 21444064
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||| |||||||||  |  |||||| ||||  |||||| |||||  |||||||||    
T  21444158 tgtaatttgaagtttttttgttttggaccttcatgaattttgacagtacaaaattgaagatatgacagggggtaaaccaaaatttgctcaaatta 21444064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 208
Target Start/End: Original strand, 31750822 - 31750896
Alignment:
Q  134 ttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||| |||||||||||||||| |||||||||| |  |||||| ||||  ||||||||||||  |||||||||    
T  31750822 ttttggatcttcatgaattttgactgtacaaaatcgaagatatgacagggggtaaaccgaaatttgctcaaatta 31750896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 35158265 - 35158319
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||| ||||||||||||||||||||||||  |||||||||    
T  35158265 tgtaatttgaagatttttgattttggaccttcatgaattttgactatacaaaatc 35158319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 44448403 - 44448457
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||| || |||||||||||||||||||||||| ||||||||||    
T  44448403 tgtaatttgaagatttctgattttggaccttcatgaattttgacagtacaaaatc 44448457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 47370235 - 47370289
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||  |||||||||||||||||||||||| ||||||||||    
T  47370235 tgtaacttgaagattttttattttggaccttcatgaattttgactgtacaaaatc 47370289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 17051912 - 17051953
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||| |||||||||||||||||||||||| ||||||||||    
T  17051912 tttttgattttggaccttcatgaattttgactgtacaaaatc 17051953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 167
Target Start/End: Complemental strand, 25571229 - 25571176
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  25571229 tgtaatttgaagatttttggttttggacattcgtgaattttgacagtacaaaat 25571176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 179
Target Start/End: Complemental strand, 15331677 - 15331598
Alignment:
Q  100 ttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgat 179  Q
    ||||||||||| ||||||| || |||||| |||||| ||  ||||||||||||||||| ||||||||||| || |||||||    
T  15331677 ttagattccaaccctgtaacttgaagattctttggtgttataccttcatgaattttga-cgtacaaaatcgatgatatgat 15331598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 11625128 - 11625187
Alignment:
Q  166 atcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||| ||||| |||||  ||||||||||||||| |||| || ||||||||||||||||    
T  11625128 atcaatgatatggtagggggtaaaccgaaattctcacaaactacaaggggcgaaagtacc 11625187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 22610274 - 22610196
Alignment:
Q  134 ttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| ||||| |||||||||||| |||||||||| || |||||| | |  ||||||| |||||||||||||||| ||||    
T  22610274 ttttgaacctttatgaattttgactgtacaaaatc-atgatatgacatgtgataaaccaaaattctctcaaattacaagg 22610196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 17167596 - 17167666
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||||||||||||| ||||| |||||||||  ||||||||| || |||||| ||||  |||| |||||||    
T  17167596 tttttggttttggacattcataaattttgactatacaaaatcgatgatatgacagggggtaaatcgaaatt 17167666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 37913937 - 37913883
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| |||||||||||| ||||||||||||||||  ||||||||| || |||||    
T  37913937 aagatatttggttttggatcttcatgaattttgactttacaaaatcgatgatatg 37913883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 38130917 - 38130971
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||| || |  ||||||||||    
T  38130917 tgtaatttgaagatttttggttttggaccttcatgaatgttaattgtacaaaatc 38130971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 14187874 - 14187833
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    |||||||||||| |||||| |||||||||||| |||||||||    
T  14187874 atttttggttttagaccttaatgaattttgactgtacaaaat 14187833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 24812864 - 24812957
Alignment:
Q  133 gttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||| || |||||||||||||||| | ||| |||| || |||||| | ||| ||||||| ||||||| |||||||| |||||  |||||||||    
T  24812864 gttttagatcttcatgaattttgactgcacataatcgatgatatgacagggggataaaccaaaattctttcaaattacaagggatgaaagtacc 24812957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 34436698 - 34436751
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || |||||||  |||||||||||||||||||||||||  |||||||||    
T  34436698 tgtaatttgaagatttcaggttttggaccttcatgaattttgatagtacaaaat 34436751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 9689415 - 9689363
Alignment:
Q  173 atatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||| |||||  ||||||||||||||||||||||| ||||| | ||||||||    
T  9689415 atatggtagggggtaaaccgaaattctctcaaattacaagggacaaaagtacc 9689363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 46146323 - 46146283
Alignment:
Q  128 ttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||| ||||||||||||||| ||||||||| ||||||||||    
T  46146323 tttttgttttggaccttcataaattttgactgtacaaaatc 46146283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 6e-27; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 7308137 - 7308233
Alignment:
Q  128 ttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||  ||||  |||||||||||||||||||||||  |||||||||||||||    
T  7308137 ttttggttttggaccttcatgaattttgacagtacaaaatcaatgatatggcagggggtaaaccgaaattctctcaaatta-caggggcgaaagtacc 7308233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 17030593 - 17030674
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||||||| | ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  17030593 ttgtttagattccaaccttgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcaatgatatg 17030674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 3505293 - 3505199
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| ||||||||||||||||||||||||| |||||||||| |||||||||||| |  |||||  ||||| ||||||||||||  |||||||||    
T  3505293 tgtaatttaaagatttttggttttggacctttatgaattttgtccgtacaaaatcgagaatatggcagggagtaaaccgaaatttactcaaatta 3505199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 31293745 - 31293651
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||  ||||  |||||||||||| ||||||||||    
T  31293745 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgggagggggtaaaccgaaattttctcaaatta 31293651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 207
Target Start/End: Original strand, 28735525 - 28735618
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatt 207  Q
    ||||| || ||||||||||||||||||||||||||||||||| | |||||||||| |  |||||| ||||| ||||||||||||  ||||||||    
T  28735525 tgtaatttgaagatttttggttttggaccttcatgaattttggctgtacaaaatcgaagatatgacagggagtaaaccgaaatttgctcaaatt 28735618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 7670570 - 7670664
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||| |||||||||||||||| |||||||||||| | |||||||| |  |||||| ||||||||||||||||||  |||||||||    
T  7670570 tgtaatttgaagatatttggttttggaccttaatgaattttgactgaacaaaatcgaagatatgacagggaataaaccgaaatttgctcaaatta 7670664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 13049733 - 13049639
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  13049733 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 13049639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 19111233 - 19111140
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||| |||||| |  |||||| |||| |||||||||||||  |||||||||    
T  19111233 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtataaaatcgaagatatgacaggg-ataaaccgaaatttgctcaaatta 19111140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 23070235 - 23070133
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagt 222  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||| |  || ||  | ||  |||| |||||||||||||||||| |||||||||||||    
T  23070235 aagatttttgcttttggaccttcatgaattttgactgtataaaatcgacgatgtggaaaggggtaaatcgaaattctctcaaattagaaggggcgaaagt 23070136  T
Q  223 acc 225  Q
    |||    
T  23070135 acc 23070133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 52839592 - 52839498
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  52839592 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 52839498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 25158853 - 25158934
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||||||| ||||||| || || ||| |||||||||||| ||||||||||||||| |||||||||| || |||||    
T  25158853 ttgtttagattccaaccctgtaatttgaatattcttggttttggacattcatgaattttgactgtacaaaatcgatgatatg 25158934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 300261 - 300344
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||| ||||||  |||||| |||||  |||||||||    
T  300261 gatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatcatagggggtaaaccaaaatttgctcaaatta 300344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 5572246 - 5572152
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||||||||| |||||||||||||||||||||||| |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  5572246 tgtaatttgaagatttttgattttggaccttcatgaattttgacagtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 5572152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 13041656 - 13041602
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  13041656 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 13041602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 32721800 - 32721706
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| |||||||||| |  |||||| ||||  |||| |||||||  |||||||||    
T  32721800 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgacagggggtaaatcgaaatttgctcaaatta 32721706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 52962326 - 52962396
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||  |||||| |||||    
T  52962326 tttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatgatagggggtaaacctaaatt 52962396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 2985790 - 2985697
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatt 207  Q
    ||||| || ||| ||||||||||| ||||||||||||||||||| |||||||||| || |||||  || | |||||||||||||  ||||||||    
T  2985790 tgtaatttgaagttttttggttttagaccttcatgaattttgactgtacaaaatcgatgatatggcagaggataaaccgaaatttgctcaaatt 2985697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 25125067 - 25124986
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||| ||  ||| ||| || ||||||||||||||| ||||||||||||||||||| |||||||||| || |||||    
T  25125067 ttgtttagatttcatccctataatttgaagatttttggtttttgaccttcatgaattttgactgtacaaaatcgatgatatg 25124986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 38703268 - 38703223
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  38703268 aagatttttggttttggaccttcgtgaattttgaccgtacaaaatc 38703223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 17582235 - 17582307
Alignment:
Q  104 attccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatat 176  Q
    ||||||| ||||||| |||||||||||| |||||| |||||||||||||||||   |||||||||||| ||||    
T  17582235 attccaaccctgtaatttaaagatttttcgttttgaaccttcatgaattttgaaattacaaaatcaatgatat 17582307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 26770213 - 26770118
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagg-gaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| |||||||||| |  |||||  ||| |  ||||||||||||| |||||||||    
T  26770213 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatcgacgatatgtcaggtggctaaaccgaaattcactcaaatta 26770118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 13439857 - 13439803
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||  ||||||||||    
T  13439857 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatc 13439803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 22817964 - 22818018
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||||||||||||||||||||||||||||  |||||||||    
T  22817964 tgtaatttgaagatttttggttttggaccttcatgaattttgactatacaaaatc 22818018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 31073951 - 31073897
Alignment:
Q  113 ctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    |||||| || ||||||||||||||||||||||||||||||||||  |||||||||    
T  31073951 ctgtaatttgaagatttttggttttggaccttcatgaattttgaatgtacaaaat 31073897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 48689187 - 48689241
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| ||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  48689187 tgtaatttaaagatttttggttttggaccgtcataaattttaaccgtacaaaatc 48689241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 26932497 - 26932440
Alignment:
Q  120 ttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    |||||||||| |||||||||||||| ||||||||||||||||| ||||| || |||||    
T  26932497 ttaaagatttctggttttggaccttgatgaattttgaccgtacgaaatcgatgatatg 26932440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 45151719 - 45151796
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaa 204  Q
    ||||||||||||| |||||||||||||| || |||||||||| || |||||  ||||  |||||||||||| ||||||    
T  45151719 tttttggttttggtccttcatgaattttaactgtacaaaatcgatgatatggcagggggtaaaccgaaattttctcaa 45151796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 7013434 - 7013306
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    ||||||| ||| |||| |||||| || |||||| |||||||||||| |||||| ||||||||  || ||||||| || | |||  ||||  |||| | ||    
T  7013434 ttgtttaaatttcaattctgtaatttgaagattctttggttttggatcttcataaattttgattgtgcaaaatcgatgacatggcagggggtaaatctaa 7013335  T
Q  195 attctctcaaattataaggggcgaaagta 223  Q
    |||||||||||||| | ||||||||||||    
T  7013334 attctctcaaattacatggggcgaaagta 7013306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 45007957 - 45008001
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  45007957 atttttagttttgaaccttcatgaattttgaccgtacaaaatcaa 45008001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 7226166 - 7226216
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||||||||||||||||||||||  |||||||||| || |||||    
T  7226166 tttttggttttggaccttcatgaattttgaatgtacaaaatcgatgatatg 7226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 14155069 - 14155015
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||  |||||||||||||||||||| |||||||||||||    
T  14155069 tgtaatttgaagatttttgcctttggaccttcatgaattttaaccgtacaaaatc 14155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 14220649 - 14220607
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  14220649 atttttggttttggaccttcataaattttgactgtacaaaatc 14220607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 14224876 - 14224834
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  14224876 atttttggttttggaccttcataaattttgactgtacaaaatc 14224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 14870223 - 14870169
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  14870223 tgtaatttgaagatttttcgttttggacctttatgaattttgactgtacaaaatc 14870169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 16897381 - 16897327
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||| |||||| |||||||||||| ||||||||||    
T  16897381 tgtaatttgaagatttttggtttttgacctttatgaattttgactgtacaaaatc 16897327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 36727880 - 36727826
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||| |||||||||||||| |||||||||||  ||||||||||||| |||||    
T  36727880 aagatttctggttttggacctttatgaattttgattgtacaaaatcaatgatatg 36727826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 18359503 - 18359430
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||| ||| | ||||| ||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||    
T  18359503 ttgtttagatttcaaccttgtaatttaaagattctttggatttagaccttcatgaattttgactgtaaaaaatc 18359430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 39218913 - 39218832
Alignment:
Q  128 ttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    |||| ||||||||||||||| ||||||||||||| |||||| || |||||  | |||| |||| ||||||| ||||||||||    
T  39218913 ttttagttttggaccttcataaattttgaccgtataaaatcgatgatatgggaggggagtaaatcgaaattttctcaaatta 39218832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 30226198 - 30226294
Alignment:
Q  129 tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||| ||| |||||||||||| |||||||||  || |||||| ||||  |||||  |||||  |||||| || |||||| |||||||||    
T  30226198 tttggttttggatctttatgaattttgacggtacaaaattgatgatatgacagggggtaaactaaaatttgctcaaactacaaggggtgaaagtacc 30226294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 17582497 - 17582536
Alignment:
Q  186 taaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||| |||||||||||| ||||||||||||||||    
T  17582497 taaaccgaaaatctctcaaattacaaggggcgaaagtacc 17582536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 34314776 - 34314847
Alignment:
Q  137 tggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||| |||||||||| || |||||  ||||| |||  |||||||  |||||||||    
T  34314776 tggaccttcatgaattttgactgtacaaaatcgatgatatggcagggagtaagtcgaaatttgctcaaatta 34314847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 55257818 - 55257779
Alignment:
Q  186 taaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  55257818 taaactgaaattctatcaaattataaggggcgaaagtacc 55257779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 5303750 - 5303696
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatga 149  Q
    ||||||||||||||| ||||||| || |||||| ||||||||| |||||||||||    
T  5303750 ttgtttagattccaaccctgtaatttgaagattctttggttttagaccttcatga 5303696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 7272642 - 7272736
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||| || ||||||||||| |||| |||||||||| || |||||  ||||  ||||| ||||||  |||||||||    
T  7272642 tgtaatttgaagttttttggttttagatcttcatgaattgtgactgtacaaaatcgatgatatggcagggggtaaactgaaatttcctcaaatta 7272736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 14004545 - 14004503
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||| || ||||||||||||||| ||||||||||    
T  14004545 atttttggttttgaactttcatgaattttgacagtacaaaatc 14004503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 30451410 - 30451446
Alignment:
Q  141 ccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    |||||||||||||||||||||||||||| | ||||||    
T  30451410 ccttcatgaattttgaccgtacaaaatcgaatatatg 30451446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 35791059 - 35791189
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttt-tggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    ||||||||||||||| ||||||| || || ||| | || |||||||||||||||||||||||| |||||||||| || |||||  ||||  |||||||||    
T  35791059 ttgtttagattccaaccctgtaatttgaatattctctgtttttggaccttcatgaattttgactgtacaaaatcgatgatatggcagggggtaaaccgaa 35791158  T
Q  195 attctctcaaattataaggggcgaaagtacc 225  Q
    || ||||||||||| || |||||||||||||    
T  35791159 atactctcaaattacaaagggcgaaagtacc 35791189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 29949638 - 29949732
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||| |||| |||||||||||||  |||||||||    
T  29949638 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgacaggggataaaccgaaatttcctcaaatta 29949732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 15543995 - 15543912
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||  ||||||||||||  |||||||||    
T  15543995 gatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgatagggggtaaaccgaaatttgctcaaatta 15543912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 38949950 - 38950033
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||  |||| ||||||| ||||||||||    
T  38949950 gatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgatagggggtaaatcgaaattttctcaaatta 38950033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 16590512 - 16590641
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttt-tggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    |||||||||||||||  |||||| || |||||||| |||||||| |||||||||||||||||  |||||||||| || ||||  |||||  |||| ||||    
T  16590512 ttgtttagattccaactctgtaatttgaagattttttggttttgcaccttcatgaattttgattgtacaaaatcgatgatatagtagggggtaaatcgaa 16590611  T
Q  195 attctctcaaattataaggggcgaaagtacc 225  Q
    ||||||||||| |||| | ||||||||||||    
T  16590612 attctctcaaa-tataggaggcgaaagtacc 16590641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 19253482 - 19253576
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  | ||  ||||||||||||| |||||||||    
T  19253482 tgtaagttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaaaatatggcatgggttaaaccgaaattcgctcaaatta 19253576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 208
Target Start/End: Complemental strand, 15580673 - 15580567
Alignment:
Q  102 agattccaatcctgtaagttaaagatttttgg-ttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctc 200  Q
    ||||| ||||| ||||| || ||||||||| | ||||||||||||||||||||||||||||||||||| || |||||  |  ||||||||| ||||||||    
T  15580673 agatttcaatcttgtaatttgaagattttttgattttggaccttcatgaattttgaccgtacaaaatcgatgatatggca-agaataaaccaaaattctc 15580575  T
Q  201 tcaaatta 208  Q
    ||||||||    
T  15580574 tcaaatta 15580567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 42223089 - 42223176
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||||||||| ||| ||||||| || |||| ||||||||||||| |||||||||||||||| |||||||||| || ||||| |||||    
T  42223089 ttgtttagatttcaaccctgtaatttgaagaattttggttttggatcttcatgaattttgactgtacaaaatcgatgatatggtaggg 42223176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 18756642 - 18756588
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18756642 tgtaatttaaagatttttggttttggaccttcatgaattttgactgtacaaaatc 18756588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 33218618 - 33218524
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||| ||  |||||  ||||  ||||||||||||  |||||||||    
T  33218618 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatgaaagatatggcagggggtaaaccgaaatttgctcaaatta 33218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 114 - 170
Target Start/End: Complemental strand, 25104028 - 25103972
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25104028 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcaa 25103972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 41906055 - 41906127
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||| ||||| ||||||| || ||||| ||||||||| ||||||||||||||||||| ||||||||||    
T  41906055 ttgtttagaatccaaccctgtaatttgaagatatttggttttcgaccttcatgaattttgactgtacaaaatc 41906127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 7318174 - 7318269
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  |||||  ||| ||||||||| |||||||||    
T  7318174 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgacgatatggcagggagttaagccgaaattcgctcaaatta 7318269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 17188904 - 17188857
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17188904 aagatttttggttttggaccttcatgaattttgacagtacaaaatcaa 17188857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 28781900 - 28781821
Alignment:
Q  128 ttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatt 207  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||||  ||||  ||||||||||||  ||||||||    
T  28781900 ttttggttttagaccttcatgaattttgaccgtacaaaatcgataatatggcagggggtaaaccgaaatttgctcaaatt 28781821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 9419792 - 9419698
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||| ||||||||| ||||||||||||||| |||||||||| |  |||||| ||||| |||| |||||||  |||||||||    
T  9419792 tgtaacttgaagattttttgttttggactttcatgaattttgactgtacaaaatcgaagatatgacagggagtaaatcgaaatttgctcaaatta 9419698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 26498803 - 26498709
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| |||||||||||||||||||||||||||||||   |||||||| || |||||  ||||  |||||||||||| ||||||||||    
T  26498803 tgtaatttgaagttttttggttttggaccttcatgaattttgactagacaaaatcgatgatatggcagggggtaaaccgaaattttctcaaatta 26498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 39373076 - 39373178
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagg-gaataaaccgaaattctctcaaattataag 212  Q
    ||||| || ||||||||||||||||||||||||||||||||||| | |||||||| | ||||||  ||| |  ||||||||||||  ||||||||| |||    
T  39373076 tgtaatttgaagatttttggttttggaccttcatgaattttgactggacaaaatcgaatatatggcaggagggtaaaccgaaatttgctcaaattacaag 39373175  T
Q  213 ggg 215  Q
    |||    
T  39373176 ggg 39373178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 16204591 - 16204506
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||| |||||||||||||| |||||||||||| || ||||||||||||  |||||  ||||  |||||||||||| ||||||||||    
T  16204591 aagaattttggttttggacattcatgaattttaactgtacaaaatcaaagatatggcagggggtaaaccgaaattttctcaaatta 16204506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 38127845 - 38127898
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||    
T  38127845 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaat 38127898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 222
Target Start/End: Original strand, 11915086 - 11915210
Alignment:
Q  100 ttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaatt 197  Q
    |||||||| || ||| ||| || |||||| |||||||||||||||||||  |||||||| ||| |||||  || ||||| |||||  ||||||| |||||    
T  11915086 ttagattcaaaccctataatttgaagattctttggttttggaccttcatagattttgactgtaaaaaattgatgatatggtagggtgataaaccaaaatt 11915185  T
Q  198 ctctcaaattataaggggcgaaagt 222  Q
    ||||||||||| | |||||||||||    
T  11915186 ctctcaaattacacggggcgaaagt 11915210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 17886708 - 17886605
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga--ataaaccgaaattctctcaaattataa 211  Q
    ||||| || ||| |||||||||||||| ||||||||| |||||| |||||||||| || |||||  |||||   |||||||||||| |||||||||| ||    
T  17886708 tgtaatttgaagttttttggttttggatcttcatgaactttgactgtacaaaatcgatgatatggcagggagggtaaaccgaaattttctcaaattaaaa 17886609  T
Q  212 gggg 215  Q
    ||||    
T  17886608 gggg 17886605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 225
Target Start/End: Original strand, 31989452 - 31989547
Alignment:
Q  129 tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||||||| |||||||||||||| ||||||||||||||| || |||||  ||||  ||||| ||||||  |||| |||||| ||||||||||||||    
T  31989452 tttggttttcgaccttcatgaattatgaccgtacaaaatcgatgatatggcaggg-gtaaactgaaatttgctcatattatagggggcgaaagtacc 31989547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 34831574 - 34831630
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  34831574 tgtaatttgaagatttttggttttggcccttcatgaattttgactgtacaaaatcaa 34831630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 2526434 - 2526517
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||| || ||| |||||||||||||||||||||||||||||||  ||||||||| || |||||  |||| ||||| |||||||    
T  2526434 tgtaatttgaagttttttggttttggaccttcatgaattttgactatacaaaatcgatgatatgtcaggggataaagcgaaatt 2526517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 36525358 - 36525453
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatag-ggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||  || |||||| || ||  ||||||||||||  |||||||||    
T  36525358 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaattgatgatatgacagtggggtaaaccgaaatttgctcaaatta 36525453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 1975763 - 1975721
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  1975763 atttttggttttggaccttcatgaattttgactgtacaaaatc 1975721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 18048911 - 18048953
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  18048911 atttttggttttggaccttcatgaattttgactgtacaaaatc 18048953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 22846272 - 22846218
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||    
T  22846272 tgtaatttaaagatctttggttttggaccttcttgaattttgactgtacaaaatc 22846218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 29884011 - 29884093
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaattctctcaaatta 208  Q
    |||||||||| |||||||||||||||||| | |||||||||| || |||||  |||||  |||||||||||| ||||||||||    
T  29884011 tttttggtttaggaccttcatgaattttggctgtacaaaatcgatgatatggaagggaggtaaaccgaaattttctcaaatta 29884093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 41100784 - 41100838
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||    
T  41100784 aagatttatggttttggaccttcatgaattttgacagtacaaaatcgactatatg 41100838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 42794106 - 42794148
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  42794106 atttttggttttggaccttcatgaattttgactgtacaaaatc 42794148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 43830783 - 43830741
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  43830783 atttttggttttggaccttcatgaattttgactgtacaaaatc 43830741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 7008066 - 7007997
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| ||| |||||| || |||||| ||||    
T  7008066 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtataaaatcgatgatatgacaggg 7007997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 33315233 - 33315293
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||||| |||||||||||||||||| |||||||| |||||||||| || ||||| |||||    
T  33315233 aagatttatggttttggaccttcatggattttgacggtacaaaatcgatgatatggtaggg 33315293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 16303914 - 16303831
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||| || |||| |||||||||||||| ||||||||||||||  ||||||||||||  |||||  ||||  ||||||||||||    
T  16303914 tgtaatttgaagaattttggttttggactttcatgaattttgagagtacaaaatcaaagatatggcagggggtaaaccgaaatt 16303831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 31377651 - 31377742
Alignment:
Q  133 gttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtac 224  Q
    |||||| || |||||||||||||||||||||||||| || |||||  ||||  |||||| |||||  ||||||||| | | |||||||||||    
T  31377651 gttttgaactttcatgaattttgaccgtacaaaatcgatgatatggcaggggttaaaccaaaatttgctcaaattacaggaggcgaaagtac 31377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 776567 - 776513
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||| ||| |||||||||||||||||||||||| ||||||||||    
T  776567 tgtaatttgaagattgttgattttggaccttcatgaattttgacagtacaaaatc 776513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 874448 - 874490
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  874448 atttttggttttagaccttcatgaattttgactgtacaaaatc 874490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 10071423 - 10071369
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  10071423 tgtaatttgaagatttatggttttggacctttatgaattttgacagtacaaaatc 10071369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 29096829 - 29096923
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| |||||| |||||||||||||||||||||||  |||||||||  || |||||  ||||  |||||||||||| ||| ||||||    
T  29096829 tgtaatttgaagttttttgattttggaccttcatgaattttgattgtacaaaatagatgatatggcagggggtaaaccgaaattttctgaaatta 29096923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 39752153 - 39752099
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  39752153 tgtaatttgaagatttctggttttggacctttatgaattttgacagtacaaaatc 39752099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 19272753 - 19272797
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||||||||| ||||||||||||||||||| ||| |||||    
T  19272753 aagatttttggttttagaccttcatgaattttgactgtaaaaaat 19272797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 13315928 - 13316039
Alignment:
Q  112 cctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattata 210  Q
    ||||||| || |||||| |||||||||| |||| |||||||||||||  ||||||||| || |||||  ||||  |||| ||||||||| ||||||||      
T  13315928 cctgtaatttgaagattatttggttttgtacctacatgaattttgac--tacaaaatctatgatatggcagggggtaaatcgaaattctttcaaatta-c 13316024  T
Q  211 aggggcgaaagtacc 225  Q
    | |||||||||||||    
T  13316025 atgggcgaaagtacc 13316039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 36795426 - 36795351
Alignment:
Q  134 ttttggaccttcatgaattttgaccgtacaaaatcaattatat-gatagggaataaaccgaaattctctcaaatta 208  Q
    |||| ||||||||| |||||||||||||||||||| || |||| |  ||||  |||||||||||| ||||||||||    
T  36795426 tttttgaccttcataaattttgaccgtacaaaatcgatgatatggcaagggggtaaaccgaaattttctcaaatta 36795351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 42223211 - 42223250
Alignment:
Q  186 taaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||||| |||||||| ||||||||||||||||    
T  42223211 taaaccgaaattctttcaaattacaaggggcgaaagtacc 42223250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 18755317 - 18755263
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||| || |||||||||||||||||||||||| || ||||||||||    
T  18755317 tgtaatttgaagacttatggttttggaccttcatgaattttaactgtacaaaatc 18755263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 30497233 - 30497286
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||||||| ||||||| ||||||||||||||||||  |||||||||    
T  30497233 tgtaatttgaagatttctggttttagaccttcatgaattttgaatgtacaaaat 30497286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 16260603 - 16260675
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||||| |||||| |||||||||||||||||  ||| |||||| |  |||||||||||   |||||||||||    
T  16260603 gatttttcgttttgaaccttcatgaattttgatagtataaaatcgaagatatgatagggggcaaaccgaaatt 16260675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 208
Target Start/End: Complemental strand, 63313 - 63230
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||  ||||||||||||  |||||||||    
T  63313 gatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatgatagggggtaaaccgaaatttgctcaaatta 63230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 12478667 - 12478750
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||  ||||||||||||  |||||||||    
T  12478667 gatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatgatagggggtaaaccgaaatttgctcaaatta 12478750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 2873531 - 2873625
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||| |||| |||||||||||||  |||||||||    
T  2873531 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatgacaggggataaaccgaaatttgctcaaatta 2873625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 11830269 - 11830352
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||  ||||||||||||  |||||||||    
T  11830269 gatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgatagggggtaaaccgaaatttgctcaaatta 11830352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 23288916 - 23288993
Alignment:
Q  99 tttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatat 176  Q
    |||||||| ||||||||||| || ||||||||||||||| || |||||||||| ||||||||||||||||||| ||||    
T  23288916 tttagatttcaatcctgtaatttgaagatttttggttttagaacttcatgaatattgaccgtacaaaatcaatgatat 23288993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 9235351 - 9235438
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||||||||| ||| | ||||| || |||| |||||||||||||||||||||||||||||| |||||||||| || |||||| ||||    
T  9235351 ttgtttagatttcaaccatgtaatttgaagaattttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgacaggg 9235438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 12936428 - 12936334
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||| |||||||||| |||||||||||| || ||| ||||  |||| ||||||| ||||||||||    
T  12936428 tgtaatttgaagttttttggttttggaccttcataaattttgaccatacaaaatcaatgatgtgacagggggtaaatcgaaattttctcaaatta 12936334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 32393393 - 32393487
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||| |||||||||||| ||||||||| || ||||||||||||  ||||| |||||  |||||||||||| ||||||||||    
T  32393393 tgtaatttgaagattttttgttttggacctttatgaattttaactgtacaaaatcaaagatatggtagggggtaaaccgaaattttctcaaatta 32393487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 38703890 - 38703796
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||||||||||||||||||||||||||||||| || |||||||||| |  ||||| |||||  ||||||||||||  |||||||||    
T  38703890 tgtaatttgaagatttttggttttggaccttcatgaatttttactgtacaaaatcgaagatatggtagggggtaaaccgaaatttgctcaaatta 38703796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 41509674 - 41509580
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||  |||||||||| |  |||||| ||||  ||||||||||||  |||||||||    
T  41509674 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatcgaagatatgacagggggtaaaccgaaatttgctcaaatta 41509580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 30872688 - 30872593
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||  | |||| |||||||||||| ||| ||||||    
T  30872688 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgataatatgtcaggggagtaaaccgaaattttctaaaatta 30872593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 9305699 - 9305605
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||||||||||||||| |||||||||||||||||| |||||||||| |  |||||| ||||  |||| |||||||  |||||||||    
T  9305699 tgtaatttgaagatttttggttttgaaccttcatgaattttgactgtacaaaatcgaagatatgacagggggtaaatcgaaatttgctcaaatta 9305605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 13572622 - 13572676
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  13572622 tgtaatttaaagatttttggttttggaccttcatgaattttgacagtaaaaaatc 13572676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 29346087 - 29346141
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  29346087 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 29346141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 32684855 - 32684801
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  32684855 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 32684801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 37545184 - 37545130
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37545184 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 37545130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 14698097 - 14698178
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||| ||||||||| ||||| || |||||||||  ||||| ||||| |||||||||||| ||||||||||||| |||||    
T  14698097 ttgtttaaattccaatcttgtaatttgaagattttttattttgaacctttatgaattttgacagtacaaaatcaatgatatg 14698178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 23245573 - 23245642
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||| || ||||||||| ||||||||| ||||||||||||||| |||||||||| || |||||||||||    
T  23245573 tgtaatttgaagatttttagttttggactttcatgaattttgactgtacaaaatcgatgatatgataggg 23245642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 30221866 - 30221947
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||||||| ||||||||||||||||||||||||||||| || |||||  || |  |||| ||||||| ||||||||||    
T  30221866 tttttggttttgaaccttcatgaattttgaccgtacaaaatcgataatatggcagagggtaaatcgaaattttctcaaatta 30221947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 35990826 - 35990745
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| |||||||| |||||||||||||||| |||||||||| |  |||||||||||  ||||||||||||  |||||||||    
T  35990826 tttttagttttggatcttcatgaattttgacagtacaaaatcgaaaatatgatagggggtaaaccgaaatttgctcaaatta 35990745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 5566776 - 5566681
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| |||||||||| |  |||||| | |||  |||| |||||||| |||||||||    
T  5566776 tgtaatttgaagatttctggttttggaccttcatgaattttgactgtacaaaatcgacgatatgacagggggctaaatcgaaattcgctcaaatta 5566681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 15935667 - 15935585
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||||||| ||||||||||||||||||| |||||||||  |  ||||| |||||  ||||||||||||  |||||||||    
T  15935667 atttttggttttagaccttcatgaattttgactgtacaaaattgaagatatggtagggggtaaaccgaaatttgctcaaatta 15935585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 23389101 - 23389155
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  23389101 tgtaatttgaagatttttggttttggaccttcataaattttgactgtacaaaatc 23389155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 24331621 - 24331567
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||  ||||||||||    
T  24331621 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtacaaaatc 24331567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 27637361 - 27637307
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  27637361 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatc 27637307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 34227409 - 34227463
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  34227409 tgtaatttgaagatttttggttttagaccttcatgaattttgactgtacaaaatc 34227463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 15568996 - 15568895
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || ||||||||||||||| |||||||||||| ||| || |||||||||| || |||||| || |  ||||||||||||   ||||||||| |||    
T  15568996 tgtaatttgaagatttttggttttagaccttcatgaaatttaacagtacaaaatcgataatatgacagagtgtaaaccgaaatttggtcaaattatcagg 15568897  T
Q  214 gg 215  Q
    ||    
T  15568896 gg 15568895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 18029707 - 18029788
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| ||||||||||||||||||||||||| ||| |||||  || |||||  ||||  |||||||||||| ||||||||||    
T  18029707 ttttttgttttggaccttcatgaattttgactgtataaaattgatgatatggcagggggtaaaccgaaattttctcaaatta 18029788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 24768621 - 24768722
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || |||||||||||||||| ||||| |||||||||||| |||||||||| |  |||||  | ||  ||||||||||||  ||||||||| ||||    
T  24768621 tgtaatttgaagatttttggttttgaaccttaatgaattttgactgtacaaaatcgaagatatggcaaggggtaaaccgaaatttgctcaaattacaagg 24768720  T
Q  214 gg 215  Q
    ||    
T  24768721 gg 24768722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 29211934 - 29212047
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaa 194  Q
    |||||||| |||||  | ||||| || ||||||| |||||||||||||||||||||||||||  ||||||||  || ||||| || |||| ||||| |||    
T  29211934 ttgtttagtttccatccttgtaatttgaagatttctggttttggaccttcatgaattttgactatacaaaatatatgatatggtaggggagtaaactgaa 29212033  T
Q  195 attctctcaaatta 208  Q
    |||  |||||||||    
T  29212034 atttgctcaaatta 29212047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Complemental strand, 31974975 - 31974930
Alignment:
Q  122 aaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  31974975 aaagatttttggttttgaaccttcatgaattttgactgtacaaaat 31974930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 24375919 - 24375828
Alignment:
Q  134 ttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||||||||||| ||| |||||||||  || |||||  ||||  ||||| ||||||  ||||||||| ||||| ||||||||||    
T  24375919 ttttggaccttcatgaatttcgactgtacaaaattgatgatatggcagggggtaaactgaaatttgctcaaattacaagggacgaaagtacc 24375828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 297691 - 297785
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||| |||||||||| ||||||||| |||||||   |||||||||| | |||||| |||||  ||||||||||||  |||||||||    
T  297691 tgtaatttgaagaattttggtttttgaccttcataaattttggttgtacaaaatcgaatatatggtagggggtaaaccgaaatttgctcaaatta 297785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 3156145 - 3156199
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| ||||||||||||||||||||||||| || ||| |||| |||||||||||    
T  3156145 tgtaatttaaagatttttggttttggaccttgataaatcttgaacgtacaaaatc 3156199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 5642803 - 5642845
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  5642803 atttttggttttggaccttcatgaattttgattgtacaaaatc 5642845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 5644744 - 5644786
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  5644744 atttttggttttggaccttcatgaattttgattgtacaaaatc 5644786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 8626607 - 8626649
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    |||||||||||||||| || |||||||||||||||||||||||    
T  8626607 gatttttggttttggaactacatgaattttgaccgtacaaaat 8626649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 10761506 - 10761560
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||  |||||||||    
T  10761506 tgtaagttgaagattttttgttttggacctttatgaattttgactttacaaaatc 10761560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 26367223 - 26367272
Alignment:
Q  128 ttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatga 178  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  26367223 ttttagttttggac-ttcatgaattttgaccgtacaaaatcaatgatatga 26367272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 38711903 - 38711861
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| || |||||||    
T  38711903 atttttggttttggaccttcatgaattttgactgttcaaaatc 38711861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 25653986 - 25653913
Alignment:
Q  125 gatttttggttttggacc-ttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |  ||||| ||| |  ||||||||||||    
T  25653986 gatttttggttttggacccttcatgaattttgacagtacaaaatcgaagatatggtagagggtaaaccgaaatt 25653913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 225
Target Start/End: Complemental strand, 28786538 - 28786441
Alignment:
Q  129 tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||| |||||||||||||||||||||||| |||||||||| || |||||  |||||  |||||| |||||  ||||||||| | || ||| |||||||    
T  28786538 tttgattttggaccttcatgaattttgactgtacaaaatcgatgatatggcagggagctaaaccaaaatttgctcaaattacagggagcggaagtacc 28786441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 33958676 - 33958717
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  33958676 tttttgattttggaccttcatcaattttgaccgtacaaaatc 33958717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 35839453 - 35839494
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||||||||  ||||||||||    
T  35839453 tttttggttttggaccttcatgaattttgatagtacaaaatc 35839494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 168
Target Start/End: Original strand, 13174961 - 13175005
Alignment:
Q  124 agatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||| |||||||| || ||||||||||||||||||||||||||    
T  13174961 agatttctggttttgaacattcatgaattttgaccgtacaaaatc 13175005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 163
Target Start/End: Complemental strand, 31343855 - 31343803
Alignment:
Q  112 cctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtaca 163  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||| |||||    
T  31343855 cctgtaatttaaagattatttggtttttgaccttcatgaattttgactgtaca 31343803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 13558582 - 13558625
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgac 157  Q
    ||||| || |||||||||||||||| ||||||||||||||||||    
T  13558582 tgtaatttgaagatttttggttttgtaccttcatgaattttgac 13558625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 8442197 - 8442147
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||||||||||||||||||||||  ||| |||||| || |||||    
T  8442197 tttttggttttggaccttcatgaattttgagtgtataaaatcgatgatatg 8442147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 36637087 - 36637129
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||    
T  36637087 atttttagttttggacattcatgaattttgaccgtataaaatc 36637129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 12719357 - 12719272
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||| ||||| |||||||||| ||||  ||||||||| || |||||  |||   ||||||||||||  |||||||||    
T  12719357 aagatttttggttgtggacattcatgaattgtgactatacaaaatcgatgatatggcaggaggtaaaccgaaatttgctcaaatta 12719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 21544224 - 21544307
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||  ||||||||||||  |||||||||    
T  21544224 gatttttggttttggaccttcatgaattttgacagtacaaaatcaaagatatgatagggggtaaaccgaaatttgctcaaatta 21544307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 1227770 - 1227853
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||  ||||||||||||  |||||||||    
T  1227770 gatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgatagggggtaaaccgaaatttgctcaaatta 1227853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 3816756 - 3816626
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    ||||||||||| ||| ||||||| || |||||| ||||||||| ||||||||||  ||||||||||||||||||||| ||||   |||   |||||| ||    
T  3816756 ttgtttagatttcaaccctgtaatttgaagattctttggtttttgaccttcatgggttttgaccgtacaaaatcaatgatatagcaggaggtaaaccaaa 3816657  T
Q  195 attctctcaaattataaggggcgaaagtacc 225  Q
    ||| |||||||||| | ||||||||||||||    
T  3816656 attttctcaaattacagggggcgaaagtacc 3816626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 7322053 - 7321959
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||  || ||||||| | ||||||||||||  ||||||||||||  |||||||||    
T  7322053 tgtaatttgaagatttttggttttggaccttcatgaattttgattgtgcaaaatcgaatatatgatagggggtaaaccgaaatttgctcaaatta 7321959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 22362701 - 22362795
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||| || |||||||||||||||||||||||||||||||||||||| |  |||||||| ||  ||||||||||||  |||||||||    
T  22362701 tgtaatttgaagacttatggttttggaccttcatgaattttgaccgtacaaaatcgaagatatgataagggttaaaccgaaatttgctcaaatta 22362795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 32217033 - 32216941
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||  |||||| ||||  |||| |||||||  |||||||||    
T  32217033 tgtaatttgaagagttttggttttggaccttcatgaattttgactgtacaaaatcaaagatatgacaggg--taaatcgaaatttgctcaaatta 32216941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 2270543 - 2270589
Alignment:
Q  122 aaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  2270543 aaagatttttggttttggaccttcatgaattttgactgtacaaaatc 2270589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 9222620 - 9222526
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||   |||  ||||||||||||  |||||||||    
T  9222620 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcggggggtaaaccgaaatttcctcaaatta 9222526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 16659755 - 16659661
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||||||||  |||||||||||||||||||||||| |||||||||| |  ||||| |||||  ||||||||||||  |||||||||    
T  16659755 tgtaatttgaagattttttattttggaccttcatgaattttgacagtacaaaatcgaagatatggtagggggtaaaccgaaatttgctcaaatta 16659661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 12292945 - 12292998
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||    
T  12292945 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaat 12292998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 196
Target Start/End: Original strand, 9662752 - 9662851
Alignment:
Q  97 tgtttagattccaatcctgtaagtt-aaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaa 195  Q
    |||||||||||||| ||||||| || |||||||||| |||||||||||| |||||||||||| ||||||| || |  |||||||||||  |||||| |||    
T  9662752 tgtttagattccaa-cctgtaatttgaaagattttttgttttggacctttatgaattttgactgtacaaagtcgacgatatgatagggggtaaaccaaaa 9662850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 14291160 - 14291208
Alignment:
Q  120 ttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||    
T  14291160 ttaaagatttttggttttggaccttcatgaattttgactatacaaaatc 14291208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 13729229 - 13729134
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||||||||||||||||||||||||| |||||||| |||||||||| |  |||||  | |||  ||||||||||||| |||||||||    
T  13729229 tgtaatttgaagatttttggttttggaccttcatgtattttgacagtacaaaatcgacgatatgtcagggggctaaaccgaaattcactcaaatta 13729134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 26882159 - 26882254
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| |||||||||| |  |||||  | |||  ||||||||||||| |||||||||    
T  26882159 tgtaatttgaagatttctggttttggaccttcatgaattttgacagtacaaaatcgacgatatggcagggggctaaaccgaaattcgctcaaatta 26882254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 9044463 - 9044521
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaatttt 154  Q
    |||||||||||||||| |||||| || |||| ||||| |||||||||||||||||||||    
T  9044463 ttgtttagattccaattctgtaatttgaagaattttgattttggaccttcatgaatttt 9044521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 9676513 - 9676459
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  9676513 tgtaatttaaagatttttggttttggatcttcatgaattttgactgtataaaatc 9676459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 17158406 - 17158352
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  17158406 tgtaatttgaagatttttggttttggacctccatgaattttgactgtacaaaatc 17158352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 22495992 - 22495938
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||||||||||||||||| |||||||||| ||||||||||    
T  22495992 tgtaatttgaagatttttggttttggaccttcaagaattttgacggtacaaaatc 22495938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 26475857 - 26475899
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  26475857 atttttggttttggaccttcatgaattttgacagtacaaaatc 26475899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 34414563 - 34414469
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||| |||||||||||||||||||||| || |||||||||| |  |||||| || | ||||| |||||||  |||||||||    
T  34414563 tgtaacttgaagattttttgttttggaccttcatgaattttaactgtacaaaatcgaagatatgacagaggataaatcgaaatttgctcaaatta 34414469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 16119776 - 16119877
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || ||||||||||| |||||||||||||||||||||||  ||||||||| |  |||||  ||||  ||||||||||||  |||||| || ||||    
T  16119776 tgtaatttgaagatttttggatttggaccttcatgaattttgactatacaaaatcgaagatatggcagggggtaaaccgaaatttactcaaaatacaagg 16119875  T
Q  214 gg 215  Q
    ||    
T  16119876 gg 16119877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 18591403 - 18591318
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||  |  |||||| || |  |||||||||||| ||||||||||    
T  18591403 aagatttttgattttggacattcatgaattttgactgtacaaaattgaagatatgacagagggtaaaccgaaattttctcaaatta 18591318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 10350160 - 10350232
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||| ||| |||| || || |||||| ||||||||||||||||||||||||| || ||||| ||||    
T  10350160 ttgtttagatttcaaccctgaaatttgaagattcttggttttggaccttcatgaattttaacggtacataatc 10350232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 32603763 - 32603723
Alignment:
Q  128 ttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  32603763 ttttggttttggaccttcatgaattttgactgtacaaaatc 32603723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 8237721 - 8237784
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || ||| ||||||||||||| ||||||||||||||||| |||||||||| || |||||    
T  8237721 tgtaatttgaagttttttggttttggtccttcatgaattttgactgtacaaaatcgatgatatg 8237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 9234927 - 9234978
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaa 165  Q
    ||||| || ||||||||||||||||||||||||| ||||||||| |||||||    
T  9234927 tgtaatttgaagatttttggttttggaccttcataaattttgactgtacaaa 9234978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 686584 - 686490
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||||||||| |||||||||||||| ||||||||| ||| |||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  686584 tgtaatttgaagatttttgattttggaccttcataaattttgactgtataaaatcgaagatatgggagggggtaaaccgaaatttgctcaaatta 686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 177
Target Start/End: Original strand, 20757498 - 20757580
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttt-tggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||||||||||||| ||||||| || ||||||   |||||||| ||||| ||||||||| ||||||||||||| || |||||    
T  20757498 ttgtttagattccaaccctgtaatttgaagattcagtggttttgaaccttaatgaattttaaccgtacaaaatcgatgatatg 20757580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 29942608 - 29942662
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||| ||||||||||||||||||| |||| ||||||||||    
T  29942608 tgtaatttgaagatttttgattttggaccttcatgaattctgacagtacaaaatc 29942662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 10343589 - 10343634
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||| || ||||||||||||||| ||||||||||    
T  10343589 aagatttttggttttgtactttcatgaattttgactgtacaaaatc 10343634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 18592102 - 18592187
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||||||||||||||||||||| |||||||  ||| ||||||||  |||||  | ||| |||||| |||||  |||||||||    
T  18592102 aagatttttggttttggaccttcatggattttgattgtataaaatcaaagatatggcatggattaaaccaaaatttgctcaaatta 18592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 3108774 - 3108710
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatga 178  Q
    ||||| || ||||||||||||||||||||||||| ||||||||  ||| |||||| || ||||||    
T  3108774 tgtaatttgaagatttttggttttggaccttcattaattttgattgtataaaatcgatgatatga 3108710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 10546155 - 10546092
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || ||| ||||||||||||| |||||||||||||| || |||||||||| || |||||    
T  10546155 tgtaatttgaagttttttggttttggtccttcatgaattttaactgtacaaaatcgatgatatg 10546092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 25167039 - 25167078
Alignment:
Q  186 taaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  25167039 taaaccgaaattctctcaaattacaagggacgaaagtacc 25167078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 11197723 - 11197789
Alignment:
Q  103 gattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||  |||||| || |||||| ||||| ||| ||| ||||||||||||||||||||||||||    
T  11197723 gattccaactctgtaatttgaagattgtttggatttagactttcatgaattttgaccgtacaaaatc 11197789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 25070528 - 25070602
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||||| | |||||||| |||||| ||||||||  ||||||||||  | |||||| |||| |||||||||||||    
T  25070528 aagatttattgttttggatcttcataaattttgattgtacaaaatcggtcatatgacaggggataaaccgaaatt 25070602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 33708833 - 33708791
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||| | |||||||||||||||||||||| ||||||||||    
T  33708833 atttttgatcttggaccttcatgaattttgactgtacaaaatc 33708791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 182
Target Start/End: Original strand, 13462702 - 13462770
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagg 182  Q
    ||||| || ||| ||||||||| |  |||||||||||||||||| ||| ||||||||| ||||| ||||    
T  13462702 tgtaatttgaagctttttggttctaaaccttcatgaattttgactgtataaaatcaatgatatggtagg 13462770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 33200067 - 33199995
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||||| ||| ||||||| || |||||| |||| ||||||||||| |||||||| ||  |||||||||    
T  33200067 ttgtttagattacaaccctgtaatttgaagattctttgattttggacctttatgaatttcgaatgtacaaaat 33199995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 34077608 - 34077544
Alignment:
Q  144 tcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||||||||| |||||||||| |  ||||| |||||  ||||||||||||  |||||||||    
T  34077608 tcatgaattttgactgtacaaaatcgaagatatggtagggggtaaaccgaaatttgctcaaatta 34077544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 13436932 - 13437042
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaattataagg 213  Q
    ||||| || ||||||||| ||||| ||||||||||||||||||  |||||||||| || |||||| ||||  |||||| |||||||||||||||| ||||    
T  13436932 tgtaatttgaagattttttgttttagaccttcatgaattttgattgtacaaaatcgatgatatgacaggg-gtaaaccaaaattctctcaaattacaagg 13437030  T
Q  214 ggcgaaagtacc 225  Q
    ||||||||||||    
T  13437031 ggcgaaagtacc 13437042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 205
Target Start/End: Original strand, 47231199 - 47231290
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaa 205  Q
    ||||| || ||| |||||||||||||||||||||||||||||||||||||||||| || |||||  ||||  |||||||||||| |||||||    
T  47231199 tgtaatttgaagttttttggttttggaccttcatgaattttgaccgtacaaaatcgataatatggcagggggtaaaccgaaattttctcaaa 47231290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 1701231 - 1701162
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaa 165  Q
    ||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  1701231 ttgtttagatttcaaccctgtaatttaaagatttttggtttaggaccttcatgaattttgagcgtacaaa 1701162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 26190813 - 26190907
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  26190813 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 26190907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 44228339 - 44228468
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    ||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||||||| |  ||||||  || |||||  ||||  |||||||||    
T  44228339 ttgtttagattacaaccctgtaatttaaagattctttggttttggaccttcatgaattttgactgggcaaaattgatgatatgccagggggtaaaccgaa 44228438  T
Q  195 attctctcaaattataaggggcgaaagtacc 225  Q
    |||  || ||||||  |||||||||||||||    
T  44228439 atttgcttaaatta-caggggcgaaagtacc 44228468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 208
Target Start/End: Original strand, 9240531 - 9240644
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaa 194  Q
    |||||||||||  || ||||||| || |||||| |||| ||||||||||| |||||||||||| ||| ||||||||| |||||| || |  ||||| |||    
T  9240531 ttgtttagatttgaaccctgtaatttgaagattctttgattttggacctttatgaattttgactgtataaaatcaatgatatgaaagagggtaaactgaa 9240630  T
Q  195 attctctcaaatta 208  Q
    ||||||||||||||    
T  9240631 attctctcaaatta 9240644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 16639698 - 16639613
Alignment:
Q  141 ccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta-taaggggcgaaagtacc 225  Q
    |||||||| |||||||| ||||||||||||| |||||||||||  |||||| ||||| ||||||||||  ||||||||||||||||    
T  16639698 ccttcatggattttgactgtacaaaatcaataatatgatagggggtaaaccaaaattttctcaaattacaaaggggcgaaagtacc 16639613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 21881297 - 21881368
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaatt 197  Q
    |||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||  ||||||||||||    
T  21881297 tttttggttttggaccttcatgaactttgacagtacaaaatcaatgatatggtagggaggtaaaccgaaatt 21881368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 47641978 - 47641883
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||| ||||||||||||||||||||||||| |||||| |||||| ||||| ||||||  |||||||||||| || |||||||    
T  47641978 tgtaatttgaagtttttttgttttggaccttcatgaattttgacagtacaacatcaatgatatggtagggaggtaaaccgaaattttcacaaatta 47641883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 5932044 - 5932138
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||| ||| |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  5932044 tgtaatttgaagatttttggttttggaccttcatgaatttcgactgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 5932138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 20158930 - 20158888
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  20158930 atttttggttttggaccttcatgaattttgaccgtacaaaatc 20158888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 22387468 - 22387414
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  22387468 tgtaatttaaagatttttggttttggaccttcaagaattttgactgtacaaaatc 22387414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 41189919 - 41190013
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||| ||||||| |||||||||| |||||||| |||||||||| || ||||| |||||  |||||||||||| ||| ||||||    
T  41189919 tgtaatttgaagatttatggttttagaccttcatggattttgacggtacaaaatcgatgatatggtagggggtaaaccgaaattttctaaaatta 41190013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 33864115 - 33864188
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||| ||||||| || |||||| |||||||||| | |||||||||||||||| ||||||||||    
T  33864115 ttgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatc 33864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 33916807 - 33916734
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||| ||||||| || |||||| |||||||||| | |||||||||||||||| ||||||||||    
T  33916807 ttgtttagattccaaccctgtaatttgaagattctttggttttgaatcttcatgaattttgactgtacaaaatc 33916734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 45195685 - 45195622
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || ||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||    
T  45195685 tgtaatttgaagatttctggttttgaaccttcatgaattttgatcgtacaaaatcaataatatg 45195622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 9209669 - 9209711
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  9209669 atttttggttttggaccttcatgaattttgactgtacaaaatc 9209711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 14910051 - 14909957
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| |||||| ||||||||||||||||||||| || |||||||||| || |||||  ||||  ||||| |||||| ||||||||||    
T  14910051 tgtaatttgaagttttttgcttttggaccttcatgaattttaactgtacaaaatcgatgatatggcagggggtaaactgaaattttctcaaatta 14909957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 23161908 - 23161962
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||| |||||||||||||||||||||||| ||||||||||    
T  23161908 tgtaatttgaagatttttgattttggaccttcatgaattttgacggtacaaaatc 23161962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 167
Target Start/End: Complemental strand, 26399137 - 26399096
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  26399137 atttttggttttggaccttcatgaattttgactgtacaaaat 26399096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 5469355 - 5469427
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||| | | ||| || ||||||||| |||||||| |||||| |||||||||| |||||||||    
T  5469355 ttgtttagattccaaccttataatttgaagatttttagttttggatcttcattaattttgaccatacaaaatc 5469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Complemental strand, 25060095 - 25060019
Alignment:
Q  101 tagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    |||||| ||||  ||||| || ||||||||| |||||| |||||||||||||||||  ||||||||||||| |||||    
T  25060095 tagatttcaattttgtaatttgaagatttttagttttgaaccttcatgaattttgattgtacaaaatcaatgatatg 25060019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 31883550 - 31883597
Alignment:
Q  121 taaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  31883550 taaagaattttggttttggaccatcatgaattttgactgtacaaaatc 31883597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 5457175 - 5457217
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||  ||||||||||    
T  5457175 atttttggttttggaccttcatgaattttgattgtacaaaatc 5457217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 21770837 - 21770891
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||  ||||||||||||||||| ||||||||||    
T  21770837 tgtaatttgaagatttttggttttgtgccttcatgaattttgactgtacaaaatc 21770891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 30147148 - 30147202
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||| |||||||||||||| |||||||||||| ||||||||||    
T  30147148 tgtaatttgaagatttatggttttggacctttatgaattttgacagtacaaaatc 30147202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 21853808 - 21853728
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatat-gatagggaataaaccgaaattctctcaaat 206  Q
    |||||||||||||| ||||||||||||||||  ||||||||| || |||| |  ||||  |||||||||||| ||||||||    
T  21853808 tttttggttttggatcttcatgaattttgactatacaaaatcgatgatatggcaagggggtaaaccgaaattttctcaaat 21853728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 151
Target Start/End: Complemental strand, 17890343 - 17890292
Alignment:
Q  100 ttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaat 151  Q
    ||||||||||| ||||||| || ||||||||| |||||| ||||||||||||    
T  17890343 ttagattccaaccctgtaatttgaagatttttagttttgaaccttcatgaat 17890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 44961088 - 44961171
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||| || |||||||||  ||||||||||||||| |||||||| |||||||||| |  ||||| ||| |  ||||||||||||    
T  44961088 tgtaatttgaagattttttattttggaccttcatggattttgactgtacaaaatcgaagatatggtagagggtaaaccgaaatt 44961171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 6284459 - 6284417
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||| |||||||||||||||||||||||| | ||||||||    
T  6284459 atttttgattttggaccttcatgaattttgactgcacaaaatc 6284417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 7261587 - 7261533
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatga 149  Q
    ||||||||||||||| ||||||| || || ||| |||||||||||||||||||||    
T  7261587 ttgtttagattccaaccctgtaatttgaacattctttggttttggaccttcatga 7261533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 15336787 - 15336733
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||| || ||||||||||| |||||||||||| ||||||||||    
T  15336787 tgtaatttgaagatttctgattttggacctttatgaattttgacagtacaaaatc 15336733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 16420995 - 16421049
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||| | |||||||||||| |||||||||||| ||||||||||    
T  16420995 tgtaatttgaagatttctagttttggacctttatgaattttgacagtacaaaatc 16421049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 27665999 - 27666053
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||| |||||||||||||||| || ||| ||||||    
T  27665999 tgtaatttgaagatttttggttttcgaccttcatgaatttttacagtagaaaatc 27666053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 22152129 - 22152076
Alignment:
Q  124 agatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    |||||||| |||||| ||||| |||||||||||| |||||||||| || |||||    
T  22152129 agatttttagttttgcacctttatgaattttgactgtacaaaatcgatgatatg 22152076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 22315210 - 22315263
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaaga-tttttggttttggaccttcatg 148  Q
    ||||||||||||||| ||||||| || |||| |||||| |||||||||||||||    
T  22315210 ttgtttagattccaaccctgtaatttgaagattttttgattttggaccttcatg 22315263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 33864321 - 33864272
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggacctt 144  Q
    ||||||||||||||| ||||||| || |||||| ||||||||||||||||    
T  33864321 ttgtttagattccaaccctgtaatttgaagattctttggttttggacctt 33864272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 33916601 - 33916650
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggacctt 144  Q
    ||||||||||||||| ||||||| || |||||| ||||||||||||||||    
T  33916601 ttgtttagattccaaccctgtaatttgaagattctttggttttggacctt 33916650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 46529044 - 46529003
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaa 164  Q
    |||| |||||||||||||||||||||||||||| | ||||||    
T  46529044 aagaattttggttttggaccttcatgaattttggctgtacaa 46529003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 168
Target Start/End: Original strand, 12126197 - 12126265
Alignment:
Q  100 ttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||| || ||||||| || | |||||||  ||||||| |||||||||||||||  ||||||||||    
T  12126197 ttagattctaaccctgtaatttgacgattttttattttggatcttcatgaattttgattgtacaaaatc 12126265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Original strand, 17890132 - 17890176
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttgga 140  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||||    
T  17890132 ttgtttagattccaaccctgtaatttaaagattttttattttgga 17890176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 25059992 - 25059940
Alignment:
Q  173 atatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||| ||||  ||||||||||| ||||||||||| ||||||||||| ||||    
T  25059992 atatgacagggggtaaaccgaaatgctctcaaattacaaggggcgaaaatacc 25059940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 332146 - 332240
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||| |||||| ||||||  |||||||||    
T  332146 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatcgaagatatgataggggataaacagaaatttgctcaaatta 332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 432677 - 432603
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |  |||||  ||||  ||||||||||||    
T  432677 aagatttttggttttggaccatcatgaattttgacggtacaaaatcgaagatatggcagggggtaaaccgaaatt 432603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 9e-23; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 100 - 221
Target Start/End: Original strand, 21744798 - 21744920
Alignment:
Q  100 ttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattc 198  Q
    ||||||||||| | | ||| ||||||||| ||||||||||||||||| | |||||||||||||||||||| || |||||  ||  |||||||||||||||    
T  21744798 ttagattccaaccatataatttaaagattatttggttttggaccttcttcaattttgaccgtacaaaatcgatgatatggcagataataaaccgaaattc 21744897  T
Q  199 tctcaaattataaggggcgaaag 221  Q
    |||||||||| |||  |||||||    
T  21744898 tctcaaattacaagaagcgaaag 21744920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 49166739 - 49166822
Alignment:
Q  125 gatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||  ||||||||||||  |||||||||    
T  49166739 gatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgatagggggtaaaccgaaatttgctcaaatta 49166822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 25244652 - 25244571
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaa 195  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||||||||  ||||||||||    
T  25244652 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatgatagggggtaaaccgaaa 25244571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 31226476 - 31226380
Alignment:
Q  112 cctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||| || |||||||||||||||||||||||||||||||||  |||||||||||||  |||||| | ||  ||||||||||||  |||||||||    
T  31226476 cctgtaatttgaagatttttggttttggaccttcatgaattttggtcgtacaaaatcaaagatatgacatggggtaaaccgaaatttgctcaaatta 31226380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 13555932 - 13555831
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg--atagggaataaaccga 193  Q
    ||||||||||| ||| ||||||| | |||||||||||||||||| |||||||||||| |||| |||||||||| || |||||  |||||| |||||||||    
T  13555932 ttgtttagatttcaaccctgtaattcaaagatttttggttttggtccttcatgaattatgactgtacaaaatcgatgatatggcataggg-ataaaccga 13555834  T
Q  194 aat 196  Q
    |||    
T  13555833 aat 13555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 50773371 - 50773466
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||| | |||  |||||||||||| ||||||||||    
T  50773371 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatcgaagatatgacaggggggtaaaccgaaattttctcaaatta 50773466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 18510065 - 18510159
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| |||||||||| |  |||||| ||||| |||| |||||||  |||||||||    
T  18510065 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatcgaagatatgacagggagtaaatcgaaatttgctcaaatta 18510159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 42056061 - 42056155
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||  ||||  ||||||||||||  |||||||||    
T  42056061 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcagggggtaaaccgaaatttgctcaaatta 42056155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 32682464 - 32682369
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| ||||||||||||||||||||||||||||||| |||||||||| || |||||  | |||  |||||||||||| ||||||||||    
T  32682464 tgtaatttgaagttttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcaggggggtaaaccgaaattttctcaaatta 32682369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 52194457 - 52194362
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatag-ggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| |||||||||||| ||||| |||||||||||||||||||||||||| |||||  || ||| |||||| ||||| ||||||||||    
T  52194457 tgtaatttgaagttttttggttttgaacctttatgaattttgaccgtacaaaatcaatgatatggaagaggagtaaaccaaaattttctcaaatta 52194362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 3652353 - 3652407
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  3652353 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 3652407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 17696357 - 17696303
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  17696357 tgtaatttgaagatttttggttttggaccttcatgaattttgacagtacaaaatc 17696303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 30919000 - 30919054
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  30919000 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 30919054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 2032695 - 2032606
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaattataagggg 215  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||||  | |||  ||||||||||||  ||||||||| ||||||    
T  2032695 tttttggttttggaccttcatgaattttgactgtacaaaatcgatgatatggcaggggggtaaaccgaaatttgctcaaattacaagggg 2032606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 96 - 225
Target Start/End: Complemental strand, 9780599 - 9780467
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg--atagggaataaaccg 192  Q
    ||||||||||| ||| | ||||| || |||||| ||||||||||||||||||||||||||||| ||| |||||| || |||||  | | ||  |||||||    
T  9780599 ttgtttagattacaaccatgtaatttgaagattatttggttttggaccttcatgaattttgactgtagaaaatcgatgatatggcagaaggggtaaaccg 9780500  T
Q  193 aaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||| |||||||||| | |||  |||||||||    
T  9780499 aaattatctcaaattacaggggatgaaagtacc 9780467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 39133176 - 39133221
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  39133176 aagatttttggttttggaccttcatgaattttgacagtacaaaatc 39133221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 8809943 - 8810030
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||||||||| ||||| | ||| || ||||||||| |||||| ||||||||||||||| |  ||||||||||||| |||||| ||||    
T  8809943 ttgtttagatttcaatcttataatttgaagatttttagttttgaaccttcatgaattttaattgtacaaaatcaatgatatgacaggg 8810030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 18165182 - 18165087
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgata-gggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||| ||||||||||||||||||||||||||| |||||||||  || |||||  | |||| ||||||||||||  |||||||||    
T  18165182 tgtaatttgaagatttctggttttggaccttcatgaattttgactgtacaaaatagatgatatggcaggggagtaaaccgaaatttgctcaaatta 18165087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 7913393 - 7913351
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  7913393 atttttggttttggaccttcatgaattttgactgtacaaaatc 7913351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 12388174 - 12388220
Alignment:
Q  121 taaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||    
T  12388174 taaagatttttggttttggaccttcatgaattttgatagtacaaaat 12388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 21507920 - 21507962
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  21507920 atttttggttttggaccttcatgaattttgactgtacaaaatc 21507962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 22854058 - 22854100
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  22854058 atttttggttttggaccttcatgaattttgactgtacaaaatc 22854100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 23184839 - 23184932
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || |||||||||||||| |||||||||||||||||||| |||||||||| |  |||||| ||||  ||||||||| ||  |||||||||    
T  23184839 tgtaatttgaagatttttggttt-ggaccttcatgaattttgactgtacaaaatcgaagatatgacagggggtaaaccgaagtttgctcaaatta 23184932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 32681990 - 32681936
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  32681990 tgtaatttaaagatttttggttttaaaccttcatgaattttgacagtacaaaatc 32681936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 49296294 - 49296240
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  49296294 tgtaacttgaagattttttgttttggaccttcatgaattttgactgtacaaaatc 49296240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 225
Target Start/End: Original strand, 16734144 - 16734276
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttt-tggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatag--ggaataaaccg 192  Q
    ||||||||||||||| ||||||| || |||||| | ||||||| || ||||||||||||||||  ||| |||||||| ||||||  |  ||  ||||| |    
T  16734144 ttgtttagattccaaccctgtaatttgaagattctatggttttagagcttcatgaattttgactctacgaaatcaatgatatgacgggagggctaaactg 16734243  T
Q  193 aaattctctcaaattataaggggcgaaagtacc 225  Q
    |||||||||||||||| | || |||||| ||||    
T  16734244 aaattctctcaaattacagggtgcgaaaatacc 16734276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 167
Target Start/End: Complemental strand, 26040786 - 26040746
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  26040786 ttttttgttttggaccttcatgaattttgaccgtacaaaat 26040746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 167
Target Start/End: Original strand, 50719681 - 50719725
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  50719681 aagatttttggttttggaccttcatgaattttgactgtacgaaat 50719725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 14121539 - 14121476
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    ||||| || ||| ||||||||||||||| ||||||||||||||| |||||||||| || |||||    
T  14121539 tgtaatttgaagttttttggttttggactttcatgaattttgactgtacaaaatcgatgatatg 14121476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 46088143 - 46088194
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatga 178  Q
    ||||||||||| ||||||||||||||||||| |||||||||| || ||||||    
T  46088143 tttttggttttcgaccttcatgaattttgactgtacaaaatcgatgatatga 46088194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 177
Target Start/End: Original strand, 5283692 - 5283746
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatg 177  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||| || |||||    
T  5283692 aagatttttggttttgaaccttcatgaattttgactctacaaaatcgatgatatg 5283746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 5514648 - 5514594
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || |||||||||||||||||||||| |||||||||||| | ||||||||    
T  5514648 tgtaatttgaagatttttggttttggacctttatgaattttgactgcacaaaatc 5514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 39152039 - 39152093
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||| |||||| | |||||||||||||||||||||||||||    
T  39152039 tgtaatttgaagattttttgttttgaatcttcatgaattttgaccgtacaaaatc 39152093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 126 - 168
Target Start/End: Complemental strand, 41325493 - 41325451
Alignment:
Q  126 atttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||| ||| ||||||||||    
T  41325493 atttttggttttggaccttcatgaatttcgactgtacaaaatc 41325451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 50604164 - 50604110
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||  |||||||||||| |||||||||    
T  50604164 tgtaatttgaagatttttggttttggacctttgtgaattttgaccatacaaaatc 50604110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 144
Target Start/End: Original strand, 25786231 - 25786280
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggacctt 144  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  25786231 ttgtttagattccaaccctgtaatttaaagattatttggttttggacctt 25786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 208
Target Start/End: Original strand, 29104256 - 29104337
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||||||| |||||||||||||||| || |||||||||| |  |||||  ||||  ||||||||||||  |||||||||    
T  29104256 tttttggttttagaccttcatgaattttaactgtacaaaatcgaagatatggcagggggtaaaccgaaatttgctcaaatta 29104337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 40568294 - 40568225
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggg 183  Q
    ||||| ||||||||||  | |||||||||||||||||||| |||  |||||||||||| |||||| ||||    
T  40568294 tgtaatttaaagatttaagattttggaccttcatgaatttcgactttacaaaatcaatgatatgacaggg 40568225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 14946046 - 14946134
Alignment:
Q  120 ttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||||||||||||||||| |||| ||||||||||  || |||||| |  |||||   ||| |||||||||||||  |||||||||    
T  14946046 ttaaagatttttggttttggactttcaagaattttgacaatataaaatcgaagatatggcgggggataaaccgaaatttgctcaaatta 14946134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Complemental strand, 30409398 - 30409334
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatga 178  Q
    ||||| || ||| |||||||||||||||||||||||||||| || ||| |||||| || ||||||    
T  30409398 tgtaatttgaagttttttggttttggaccttcatgaattttaactgtataaaatcgatgatatga 30409334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 168
Target Start/End: Original strand, 16589082 - 16589117
Alignment:
Q  133 gttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||| ||||||||||    
T  16589082 gttttggaccttcatgaattttgacagtacaaaatc 16589117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 17251328 - 17251423
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgataggga-ataaaccgaaattctctcaaatta 208  Q
    ||||| || ||| |||||| |||||||||||| ||||||||||| ||| ||||||||| | ||| |||| |  |||||||||||| || |||||||    
T  17251328 tgtaatttgaagttttttgattttggaccttcgtgaattttgacagtataaaatcaatgacatggtaggaaggtaaaccgaaattttcacaaatta 17251423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 42161280 - 42161339
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttg 155  Q
    ||||||||||| |||  |||||| || |||||||||| |||| |||||||||||||||||    
T  42161280 ttgtttagatttcaactctgtaatttgaagatttttgatttttgaccttcatgaattttg 42161339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Complemental strand, 49277931 - 49277860
Alignment:
Q  97 tgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    |||||||||||||| | ||||| || |||||| |||||||||| |||||||| |||||||||  ||||||||    
T  49277931 tgtttagattccaaccttgtaatttgaagattatttggttttgaaccttcataaattttgacgatacaaaat 49277860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 14574753 - 14574807
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||| | |||||| || ||||||||||    
T  14574753 tgtaaattgaagatttttggttttggaccttcgttaatttttactgtacaaaatc 14574807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 24675362 - 24675416
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||| ||||||||||||||||||||||||| ||  ||||||||||    
T  24675362 tgtaatttgaagatatttggttttggaccttcatgaatttcgattgtacaaaatc 24675416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Original strand, 31031611 - 31031677
Alignment:
Q  102 agattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||| ||||||| || || ||| |||||| |||||||||||| ||||||||| |||||||||    
T  31031611 agattccaaccctgtaatttgaatattctttggtgttggaccttcataaattttgacagtacaaaat 31031677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 170
Target Start/End: Original strand, 38926060 - 38926122
Alignment:
Q  109 aatcctgtaagttaaagatttttgg-ttttggaccttcatgaattttgaccgtacaaaatcaa 170  Q
    |||||| ||| |||||||||||| | |||||||| |||||||| |||||| ||||||||||||    
T  38926060 aatcctataatttaaagattttttgattttggacattcatgaaatttgactgtacaaaatcaa 38926122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 5283900 - 5283847
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaaga-tttttggttttggaccttcatg 148  Q
    ||||||||||||||||||||||| || |||| |||||| ||||| |||||||||    
T  5283900 ttgtttagattccaatcctgtaatttgaagattttttgattttgaaccttcatg 5283847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 168
Target Start/End: Original strand, 15785998 - 15786031
Alignment:
Q  135 tttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||| ||||||||||||||||||||||    
T  15785998 tttggaccttcgtgaattttgaccgtacaaaatc 15786031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 29700563 - 29700636
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatt-tttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||| ||||| | || |||||| |||  |||| |||||||||||||||| || ||||||||||    
T  29700563 ttgtttagattccaaccctgttatttgaagattctttaatttttgaccttcatgaatttttactgtacaaaatc 29700636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 167
Target Start/End: Original strand, 31856976 - 31857029
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||| || ||||||| ||||||| |||||||||||| |||||| |||||||||    
T  31856976 tgtaatttgaagatttctggttttagaccttcatgaactttgactgtacaaaat 31857029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 225
Target Start/End: Complemental strand, 13555792 - 13555740
Alignment:
Q  173 atatgatagggaataaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||| |||||  ||||||||||||||||||||||| ||||| | ||||||||    
T  13555792 atatggtagggggtaaaccgaaattctctcaaattacaagggacaaaagtacc 13555740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 35060 - 34960
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaa 195  Q
    ||||||||||| ||| ||||||| || ||||||||  |||| ||||||||||||||||||||  ||||||||| || |||||||||||  ||||| ||||    
T  35060 ttgtttagatttcaaccctgtaatttgaagattttgtgtttcggaccttcatgaattttgactatacaaaatcgatgatatgatagggggtaaactgaaa 34961  T
Q  196 t 196  Q
    |    
T  34960 t 34960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 168
Target Start/End: Complemental strand, 12768 - 12722
Alignment:
Q  122 aaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  12768 aaagatttttggttttggaccttcatgaattttgacagtacaaaatc 12722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 6807 - 6901
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    |||||||| | ||||||||||||| ||||||||||||||||||| |||||||||| |  |||||| | ||  |||||| |||||| |||||||||    
T  6807 tgtaagttgatgatttttggtttttgaccttcatgaattttgactgtacaaaatcgaaaatatgacatggggtaaaccaaaattcgctcaaatta 6901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 212595 - 212649
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  212595 tgtaatttgaagatttttggttttggaccttcatgaattttgactgtacaaaatc 212649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 167
Target Start/End: Original strand, 82212 - 82283
Alignment:
Q  96 ttgtttagattccaatcctgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaat 167  Q
    ||||||||||||||| | ||||| || ||  ||||| ||||| ||||||||||||||||||| |||||||||    
T  82212 ttgtttagattccaaccatgtaatttgaaatttttttgttttagaccttcatgaattttgactgtacaaaat 82283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 82333 - 82372
Alignment:
Q  186 taaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||||||||||||||||||||| | ||||||||||||||    
T  82333 taaaccgaaattctctcaaattacatggggcgaaagtacc 82372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 18884 - 18839
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  18884 aagatttttggttttggaccttcatgaattttgactgtacaaaatc 18839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 208
Target Start/End: Original strand, 12550 - 12644
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||| || ||||||||||||||||||| | ||||||||||||| |||||||||| |  |||||  ||||  |||||||||||| | ||||||||    
T  12550 tgtaatttgaagatttttggttttggacttccatgaattttgactgtacaaaatcgaagatatggcagggggtaaaccgaaattttgtcaaatta 12644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1462 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1462
Description:

Target: scaffold1462; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 208
Target Start/End: Original strand, 204 - 289
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaattctctcaaatta 208  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||| |  ||||| |||||  |||||  ||||| ||||||||||    
T  204 aagatttctggctttggaccttcatgaattttgacagtacaaaatcgacgatatggtagggggtaaacataaattttctcaaatta 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 225
Target Start/End: Original strand, 25866 - 25905
Alignment:
Q  186 taaaccgaaattctctcaaattataaggggcgaaagtacc 225  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25866 taaaccgaaattctctcaaattacaaggggcgaaagtacc 25905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 145174 - 145100
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||  || ||||| |||||  |||| |||||||    
T  145174 aagatttttgattttggaccttcatgaattgtgactgtacaaaatagatgatatggtagggggtaaatcgaaatt 145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 9316 - 9357
Alignment:
Q  127 tttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  9316 tttttggttttggaccttcatgaattttgactgtataaaatc 9357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 197
Target Start/End: Original strand, 84265 - 84339
Alignment:
Q  123 aagatttttggttttggaccttcatgaattttgaccgtacaaaatcaattatatgatagggaataaaccgaaatt 197  Q
    ||||||| || |||||||||||||||||||| ||| |||||||||| || ||||   ||||  ||||||||||||    
T  84265 aagatttctgattttggaccttcatgaatttcgactgtacaaaatcgatgatatagcagggggtaaaccgaaatt 84339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 168
Target Start/End: Complemental strand, 242622 - 242568
Alignment:
Q  114 tgtaagttaaagatttttggttttggaccttcatgaattttgaccgtacaaaatc 168  Q
    ||||| || ||||||||||||||||||||||| | |||||| || ||||||||||    
T  242622 tgtaaattgaagatttttggttttggaccttcgttaatttttactgtacaaaatc 242568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University