View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15864_low_62 (Length: 213)
Name: NF15864_low_62
Description: NF15864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15864_low_62 |
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Alignment Details
Target: chr1 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 29319093 - 29319273
Alignment:
| Q |
20 |
agactttgcaaagaagaaccaagtagtgaattccaaaccaaataaaacacaaacatatagatggagagaggattatacctatcaaaatagagtgcaaaag |
119 |
Q |
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| T |
29319093 |
agactttgcaaagaagaaccaagtagtgaattccaaaccaaataaaacacaaacatatagatggagagaggattatacctatcaaaatagagtgcaaaag |
29319192 |
T |
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| Q |
120 |
gggttataacaatgaatgcaacggcatggcggtacacaacaaatacatagttgctcattcctctgttcaatgcagcctttg |
200 |
Q |
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| T |
29319193 |
gggttataacaatgaatgcaacggcatggcggtacacaacaaatacatagttgctcattcctctgttcaatgcagcctttg |
29319273 |
T |
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