View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15865_low_1 (Length: 738)

Name: NF15865_low_1
Description: NF15865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15865_low_1
NF15865_low_1
[»] chr4 (46 HSPs)
chr4 (5-361)||(48644844-48645200)
chr4 (362-731)||(48645234-48645604)
chr4 (383-647)||(49524557-49524822)
chr4 (374-643)||(35401740-35402010)
chr4 (383-647)||(20493827-20494092)
chr4 (380-643)||(54387711-54387973)
chr4 (383-677)||(43507167-43507462)
chr4 (393-623)||(39345574-39345805)
chr4 (383-677)||(320694-320989)
chr4 (383-677)||(43508447-43508742)
chr4 (383-677)||(33265804-33266099)
chr4 (383-643)||(51013714-51013975)
chr4 (383-677)||(4173534-4173829)
chr4 (388-677)||(43520903-43521193)
chr4 (383-677)||(33264382-33264678)
chr4 (383-677)||(319273-319568)
chr4 (387-609)||(11254123-11254345)
chr4 (383-676)||(5439442-5439736)
chr4 (383-610)||(42982313-42982541)
chr4 (383-676)||(833223-833517)
chr4 (383-676)||(834837-835131)
chr4 (383-676)||(5437811-5438105)
chr4 (382-564)||(4169685-4169867)
chr4 (386-564)||(2691377-2691554)
chr4 (384-560)||(20819986-20820156)
chr4 (602-701)||(11641860-11641959)
chr4 (386-463)||(41761790-41761867)
chr4 (296-360)||(48646855-48646918)
chr4 (625-703)||(54387686-54387763)
chr4 (383-462)||(48813787-48813866)
chr4 (384-463)||(49523125-49523204)
chr4 (386-459)||(7149542-7149615)
chr4 (382-463)||(51011925-51012006)
chr4 (581-677)||(4172311-4172407)
chr4 (469-533)||(41759492-41759556)
chr4 (383-463)||(43519424-43519504)
chr4 (386-489)||(2693271-2693373)
chr4 (584-643)||(11641884-11641943)
chr4 (383-460)||(35404492-35404569)
chr4 (383-463)||(41781539-41781619)
chr4 (404-463)||(48646791-48646850)
chr4 (618-677)||(49524561-49524620)
chr4 (386-422)||(11601674-11601710)
chr4 (618-677)||(20494029-20494088)
chr4 (404-463)||(52868193-52868252)
chr4 (581-610)||(2691606-2691635)
[»] chr6 (36 HSPs)
chr6 (380-731)||(10569659-10570011)
chr6 (386-701)||(21068628-21068944)
chr6 (373-642)||(6902727-6902996)
chr6 (383-655)||(9399851-9400124)
chr6 (427-701)||(21045354-21045629)
chr6 (383-643)||(7051073-7051334)
chr6 (382-677)||(32518291-32518587)
chr6 (382-643)||(11357024-11357284)
chr6 (383-647)||(20525158-20525423)
chr6 (369-643)||(21091092-21091355)
chr6 (382-677)||(18644898-18645193)
chr6 (400-609)||(33267078-33267288)
chr6 (383-643)||(13610690-13610941)
chr6 (383-677)||(32454248-32454542)
chr6 (383-677)||(3480452-3480746)
chr6 (383-613)||(7371175-7371406)
chr6 (467-677)||(32437211-32437422)
chr6 (618-731)||(7051019-7051132)
chr6 (387-643)||(33276805-33277053)
chr6 (404-579)||(14337687-14337861)
chr6 (618-700)||(6902703-6902785)
chr6 (619-701)||(21091297-21091379)
chr6 (381-446)||(8605351-8605416)
chr6 (383-463)||(6899485-6899565)
chr6 (618-690)||(33276994-33277066)
chr6 (387-463)||(10568403-10568479)
chr6 (384-463)||(20523367-20523446)
chr6 (620-678)||(9399862-9399920)
chr6 (383-463)||(32439135-32439215)
chr6 (383-463)||(13613626-13613706)
chr6 (398-456)||(14338526-14338584)
chr6 (383-461)||(32516877-32516955)
chr6 (386-463)||(7373002-7373079)
chr6 (618-678)||(11357023-11357083)
chr6 (384-458)||(11355223-11355297)
chr6 (387-444)||(7049790-7049847)
[»] chr3 (56 HSPs)
chr3 (383-731)||(48829356-48829707)
chr3 (383-703)||(51686162-51686483)
chr3 (380-701)||(610992-611314)
chr3 (383-703)||(46113873-46114195)
chr3 (386-643)||(42282301-42282559)
chr3 (382-643)||(23291569-23291830)
chr3 (384-643)||(2378811-2379071)
chr3 (393-643)||(17516801-17517052)
chr3 (388-677)||(2661702-2661992)
chr3 (380-643)||(21350433-21350697)
chr3 (383-677)||(53094067-53094362)
chr3 (386-647)||(54412371-54412633)
chr3 (383-643)||(30598337-30598598)
chr3 (375-677)||(3150244-3150547)
chr3 (381-677)||(38193304-38193601)
chr3 (383-643)||(44267981-44268242)
chr3 (374-677)||(46310230-46310534)
chr3 (383-677)||(46308807-46309102)
chr3 (383-643)||(41979180-41979441)
chr3 (383-677)||(46609149-46609444)
chr3 (383-677)||(46611097-46611392)
chr3 (383-677)||(53187742-53188037)
chr3 (383-643)||(7883328-7883589)
chr3 (383-643)||(35903825-35904086)
chr3 (383-643)||(54899902-54900163)
chr3 (383-677)||(53092623-53092918)
chr3 (383-623)||(27897151-27897391)
chr3 (383-677)||(44795684-44795979)
chr3 (439-623)||(43766895-43767080)
chr3 (383-677)||(38191895-38192178)
chr3 (383-676)||(28626411-28626705)
chr3 (383-463)||(27899145-27899225)
chr3 (382-463)||(53190823-53190904)
chr3 (383-463)||(2226216-2226296)
chr3 (383-463)||(21348723-21348803)
chr3 (383-463)||(23293234-23293314)
chr3 (383-472)||(51684610-51684699)
chr3 (383-463)||(54898437-54898517)
chr3 (618-701)||(42282277-42282360)
chr3 (381-463)||(46112485-46112567)
chr3 (392-571)||(24846447-24846626)
chr3 (386-463)||(2377032-2377109)
chr3 (385-462)||(43765139-43765216)
chr3 (618-678)||(17516800-17516860)
chr3 (383-463)||(30599982-30600062)
chr3 (389-472)||(2660218-2660301)
chr3 (381-463)||(17515308-17515390)
chr3 (386-463)||(42279510-42279587)
chr3 (383-463)||(600725-600805)
chr3 (383-463)||(41977750-41977830)
chr3 (477-551)||(23875760-23875834)
chr3 (625-678)||(30598546-30598599)
chr3 (607-647)||(2378764-2378804)
chr3 (618-678)||(23291771-23291831)
chr3 (404-463)||(35905776-35905835)
chr3 (383-421)||(7884950-7884988)
[»] chr2 (41 HSPs)
chr2 (379-731)||(19581410-19581763)
chr2 (386-647)||(19906685-19906947)
chr2 (383-647)||(16376736-16377001)
chr2 (383-643)||(39663154-39663413)
chr2 (383-643)||(39456608-39456869)
chr2 (383-647)||(34400314-34400573)
chr2 (386-647)||(6799231-6799494)
chr2 (383-677)||(16764406-16764700)
chr2 (440-643)||(42517614-42517818)
chr2 (383-675)||(24205598-24205891)
chr2 (383-643)||(40561706-40561967)
chr2 (381-677)||(14387347-14387644)
chr2 (386-579)||(37646371-37646564)
chr2 (383-677)||(2577275-2577569)
chr2 (383-676)||(37021981-37022274)
chr2 (441-647)||(17697933-17698140)
chr2 (386-582)||(31474969-31475166)
chr2 (383-601)||(6783364-6783583)
chr2 (386-579)||(161968-162160)
chr2 (383-489)||(14389122-14389228)
chr2 (374-463)||(40560214-40560303)
chr2 (383-463)||(16763076-16763156)
chr2 (381-472)||(37645485-37645576)
chr2 (383-463)||(2766934-2767014)
chr2 (381-472)||(19908301-19908393)
chr2 (383-463)||(39664812-39664892)
chr2 (381-463)||(17696204-17696286)
chr2 (377-463)||(44709809-44709895)
chr2 (618-678)||(42517759-42517819)
chr2 (618-677)||(16376938-16376997)
chr2 (585-642)||(6783592-6783649)
chr2 (387-463)||(42519269-42519346)
chr2 (618-678)||(39456607-39456667)
chr2 (618-677)||(17697937-17697996)
chr2 (618-677)||(19906884-19906943)
chr2 (618-677)||(34400510-34400569)
chr2 (645-691)||(31474893-31474939)
chr2 (383-421)||(42517558-42517596)
chr2 (581-610)||(161902-161931)
chr2 (581-610)||(31474906-31474935)
chr2 (637-690)||(37646293-37646346)
[»] chr8 (51 HSPs)
chr8 (383-643)||(26238726-26238987)
chr8 (381-678)||(41823888-41824186)
chr8 (383-647)||(42943250-42943515)
chr8 (380-643)||(22273719-22273983)
chr8 (383-642)||(5037893-5038150)
chr8 (468-701)||(3152042-3152276)
chr8 (383-677)||(27692631-27692926)
chr8 (380-677)||(29238981-29239279)
chr8 (383-643)||(43261967-43262226)
chr8 (383-677)||(33761069-33761364)
chr8 (386-643)||(13283823-13284081)
chr8 (383-643)||(38548659-38548920)
chr8 (383-677)||(35510613-35510908)
chr8 (382-677)||(601498-601794)
chr8 (383-643)||(8608237-8608499)
chr8 (383-643)||(13106804-13107065)
chr8 (384-643)||(33707207-33707467)
chr8 (383-677)||(29237151-29237446)
chr8 (383-677)||(33762511-33762802)
chr8 (383-643)||(41040720-41040982)
chr8 (383-677)||(35509214-35509509)
chr8 (382-609)||(13484544-13484771)
chr8 (383-676)||(15308056-15308350)
chr8 (383-676)||(15488425-15488719)
chr8 (386-676)||(27404213-27404504)
chr8 (427-581)||(17807063-17807217)
chr8 (405-540)||(15562446-15562580)
chr8 (618-703)||(26238928-26239013)
chr8 (584-703)||(41824126-41824245)
chr8 (386-463)||(26242378-26242455)
chr8 (398-579)||(29694210-29694391)
chr8 (386-463)||(41825708-41825785)
chr8 (383-463)||(8609851-8609931)
chr8 (386-502)||(9671980-9672096)
chr8 (383-463)||(34681075-34681155)
chr8 (382-463)||(13282477-13282558)
chr8 (381-463)||(7745176-7745258)
chr8 (386-463)||(42941777-42941854)
chr8 (581-643)||(41824157-41824219)
chr8 (384-472)||(5036446-5036534)
chr8 (383-463)||(27691154-27691234)
chr8 (377-442)||(600754-600819)
chr8 (383-463)||(38547228-38547308)
chr8 (384-431)||(9795535-9795582)
chr8 (383-463)||(22272334-22272416)
chr8 (618-681)||(41824092-41824155)
chr8 (618-678)||(41040922-41040983)
chr8 (383-463)||(13108400-13108480)
chr8 (383-463)||(41042648-41042728)
chr8 (618-678)||(43261966-43262026)
chr8 (581-610)||(15562646-15562675)
[»] chr1 (52 HSPs)
chr1 (382-703)||(52641887-52642209)
chr1 (383-677)||(37345756-37346051)
chr1 (382-643)||(2870904-2871166)
chr1 (383-642)||(31236819-31237079)
chr1 (386-643)||(3011858-3012116)
chr1 (384-647)||(50554164-50554428)
chr1 (381-677)||(8167940-8168236)
chr1 (383-665)||(25276742-25277025)
chr1 (383-677)||(26223587-26223882)
chr1 (386-643)||(51894570-51894828)
chr1 (378-677)||(27089073-27089373)
chr1 (383-677)||(8169362-8169657)
chr1 (394-643)||(33599229-33599479)
chr1 (382-643)||(46582009-46582271)
chr1 (383-643)||(34776569-34776830)
chr1 (383-647)||(37087960-37088225)
chr1 (383-643)||(4854410-4854671)
chr1 (467-642)||(45045004-45045180)
chr1 (383-677)||(47011456-47011750)
chr1 (382-677)||(1443976-1444271)
chr1 (383-677)||(9120039-9120333)
chr1 (474-643)||(6816928-6817106)
chr1 (383-463)||(25278997-25279077)
chr1 (429-564)||(23577682-23577817)
chr1 (375-465)||(25278846-25278936)
chr1 (382-463)||(2869578-2869659)
chr1 (383-463)||(3013520-3013600)
chr1 (394-555)||(3369441-3369602)
chr1 (383-472)||(25278403-25278492)
chr1 (383-472)||(37344342-37344431)
chr1 (383-463)||(31238539-31238619)
chr1 (381-463)||(34778182-34778264)
chr1 (381-463)||(50556141-50556223)
chr1 (383-463)||(4856010-4856090)
chr1 (585-677)||(25276979-25277071)
chr1 (383-463)||(27087283-27087363)
chr1 (581-643)||(25277009-25277071)
chr1 (386-463)||(52643659-52643736)
chr1 (383-463)||(6818722-6818802)
chr1 (618-678)||(51894769-51894829)
chr1 (383-463)||(51896196-51896276)
chr1 (382-445)||(33599186-33599249)
chr1 (381-463)||(9121712-9121794)
chr1 (552-676)||(20944885-20945010)
chr1 (618-678)||(3012057-3012117)
chr1 (383-463)||(46583600-46583680)
chr1 (384-451)||(6816866-6816933)
chr1 (618-677)||(37087964-37088023)
chr1 (618-677)||(50554365-50554424)
chr1 (618-676)||(31237021-31237079)
chr1 (386-463)||(33602688-33602765)
chr1 (383-420)||(45044949-45044986)
[»] chr7 (57 HSPs)
chr7 (380-655)||(47384291-47384567)
chr7 (375-643)||(24226573-24226842)
chr7 (383-643)||(13169511-13169772)
chr7 (382-643)||(37113940-37114202)
chr7 (386-643)||(39857648-39857906)
chr7 (387-643)||(35691431-35691688)
chr7 (381-564)||(46437105-46437288)
chr7 (386-643)||(6605225-6605483)
chr7 (383-677)||(35403413-35403708)
chr7 (381-643)||(34774996-34775259)
chr7 (376-677)||(35401962-35402264)
chr7 (386-609)||(48227803-48228027)
chr7 (467-677)||(29994961-29995172)
chr7 (383-550)||(38549547-38549714)
chr7 (383-643)||(22155686-22155936)
chr7 (383-643)||(22211601-22211851)
chr7 (374-677)||(20479514-20479817)
chr7 (383-613)||(45361134-45361365)
chr7 (386-643)||(37791657-37791915)
chr7 (386-600)||(27664433-27664648)
chr7 (501-643)||(38472378-38472521)
chr7 (383-623)||(77862-78103)
chr7 (383-647)||(23904583-23904861)
chr7 (392-578)||(13039536-13039722)
chr7 (591-703)||(38549714-38549826)
chr7 (386-463)||(37796225-37796302)
chr7 (381-472)||(39859264-39859355)
chr7 (383-463)||(47386253-47386333)
chr7 (386-463)||(24228453-24228530)
chr7 (404-564)||(48311641-48311801)
chr7 (581-643)||(46437834-46437896)
chr7 (383-472)||(38474178-38474267)
chr7 (382-463)||(46439542-46439623)
chr7 (618-678)||(22211600-22211660)
chr7 (383-463)||(27666109-27666189)
chr7 (383-463)||(30940469-30940549)
chr7 (382-462)||(37115571-37115651)
chr7 (618-678)||(38472462-38472522)
chr7 (618-678)||(47384496-47384556)
chr7 (619-678)||(6605224-6605283)
chr7 (386-453)||(13018036-13018103)
chr7 (405-463)||(13168142-13168200)
chr7 (377-463)||(34776959-34777045)
chr7 (582-643)||(38549739-38549800)
chr7 (383-472)||(45359336-45359425)
chr7 (383-463)||(56330-56410)
chr7 (618-678)||(22155685-22155745)
chr7 (618-678)||(24226783-24226843)
chr7 (618-678)||(35691629-35691689)
chr7 (618-690)||(37791856-37791928)
chr7 (383-444)||(23906295-23906356)
chr7 (618-678)||(34775200-34775260)
chr7 (618-678)||(37114143-37114203)
chr7 (618-678)||(39857847-39857907)
chr7 (383-454)||(29996567-29996638)
chr7 (581-610)||(13036358-13036387)
chr7 (384-421)||(29994907-29994944)
[»] chr5 (36 HSPs)
chr5 (383-616)||(8541126-8541360)
chr5 (377-647)||(28813589-28813862)
chr5 (383-643)||(12738564-12738825)
chr5 (383-643)||(12801387-12801648)
chr5 (383-643)||(30463900-30464161)
chr5 (386-647)||(28821915-28822176)
chr5 (385-677)||(17577729-17578022)
chr5 (383-643)||(32134231-32134497)
chr5 (380-643)||(34328651-34328919)
chr5 (383-643)||(7269274-7269535)
chr5 (381-677)||(21842786-21843083)
chr5 (382-600)||(2852885-2853104)
chr5 (383-677)||(40782006-40782300)
chr5 (383-677)||(29620138-29620432)
chr5 (379-581)||(41493840-41494042)
chr5 (381-642)||(42471546-42471808)
chr5 (427-564)||(27077375-27077512)
chr5 (383-463)||(8539675-8539755)
chr5 (383-461)||(36057659-36057737)
chr5 (383-463)||(17574318-17574398)
chr5 (383-463)||(7267843-7267923)
chr5 (380-463)||(34327632-34327715)
chr5 (581-643)||(2181524-2181586)
chr5 (554-677)||(24539933-24540057)
chr5 (618-678)||(30464102-30464162)
chr5 (382-460)||(2179786-2179864)
chr5 (393-463)||(43492142-43492212)
chr5 (386-463)||(18625052-18625129)
chr5 (383-463)||(24541256-24541336)
chr5 (383-472)||(30468315-30468404)
chr5 (618-678)||(2181523-2181583)
chr5 (618-678)||(12738563-12738623)
chr5 (618-678)||(12801386-12801446)
chr5 (382-421)||(2854412-2854451)
chr5 (484-552)||(19998360-19998430)
chr5 (618-677)||(28813593-28813652)
[»] scaffold0345 (2 HSPs)
scaffold0345 (382-643)||(1385-1645)
scaffold0345 (618-678)||(1384-1444)
[»] scaffold0004 (1 HSPs)
scaffold0004 (386-701)||(106673-106978)
[»] scaffold1712 (1 HSPs)
scaffold1712 (383-676)||(982-1276)
[»] scaffold0058 (4 HSPs)
scaffold0058 (496-677)||(7031-7213)
scaffold0058 (383-522)||(14293-14432)
scaffold0058 (377-463)||(3288-3374)
scaffold0058 (377-463)||(4460-4546)
[»] scaffold0081 (1 HSPs)
scaffold0081 (383-677)||(54053-54347)
[»] scaffold0002 (1 HSPs)
scaffold0002 (380-459)||(436262-436341)
[»] scaffold0001 (1 HSPs)
scaffold0001 (501-576)||(63617-63692)
[»] scaffold0564 (1 HSPs)
scaffold0564 (385-463)||(8264-8342)


Alignment Details
Target: chr4 (Bit Score: 300; Significance: 1e-168; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 5 - 361
Target Start/End: Original strand, 48644844 - 48645200
Alignment:
Q  5 cgtgttagaaatggtggtggaagtggtggtggtttagttgtgcctgcaaatattggttctgccacggtggcaacagcagtaacccattagaggtagggtc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48644844 cgtgttagaaatggtggtggaagtggtggtggtttagttgtgcctgcaaatattggttctgccacggtggcaacagcagtaacccattagaggtagggtc 48644943  T
Q  105 gagccagcaagagaagaatcaaaaatattatatagatcaaaccacaccactgacattacaatatttgacatttcacatatannnnnnnnnnnnnnnnnnn 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                       
T  48644944 gagccagcaagagaagaatcaaaaatattatatagatcaaaccacaccactgacattacaatatttgacatttcacatatatttttttattttttgtttt 48645043  T
Q  205 caccccactccccttcgttagagtcatgtcattttagtaaaggcttacttgtatacttactagcagttgctatacatatatataatgtcttgtttgatta 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48645044 caccccactccccttcgttagagtcatgtcattttagtaaaggcttacttgtatacttactagcagttgctatacatatatataatgtcttgtttgatta 48645143  T
Q  305 aaactattggacagttttcatctatatcgatgtaatattgttacaacaattacaaca 361  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48645144 aaactattggacagttttcatctatatcgatgtaatattgttacaacaattacaaca 48645200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 362 - 731
Target Start/End: Original strand, 48645234 - 48645604
Alignment:
Q  362 gctgaattcaatattttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttag 461  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  | ||||||||| | |||||||||||||||||||||||    
T  48645234 gctgaattcaatattttaatagactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttag 48645333  T
Q  462 tcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacg 561  Q
    || ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48645334 tcctcgaatttacaaaatgttcatcaaatcagtacctccgttcaattggtctgttaacgaaggtgacgtgtattgttaacctcttacaaggcttaccacg 48645433  T
Q  562 tcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgat 660  Q
    ||| |||||| |||||||  ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  48645434 tcagatgtcacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggatcaaattgattgattttcagaaaattgccaaggaacaaattgat 48645533  T
Q  661 tgattatcagaaaattgcaaaatttccaacgactctttctccttttcaagctctatgtacaatgatgatgt 731  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48645534 tgattttcagaaaattgcaaaatttccaacggctctttctccttttcaagctctatgtacaatgatgatgt 48645604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 383 - 647
Target Start/End: Complemental strand, 49524822 - 49524557
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||| ||||| ||||||||||   |||||||||||||||     
T  49524822 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 49524723  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||| |||||||  |    
T  49524722 aatcaaatcagtccttccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttaccaggcttaccacgtcatatgtcacgcaagcaggg 49524623  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    |||||||||||||||||||||||||||| |||||| |||||| || |||||| |||||||||||||    
T  49524622 accaaattgattgatttacagaaaattgtcaaggaccaaattgatggattttgagaaaattgtcaa 49524557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 374 - 643
Target Start/End: Original strand, 35401740 - 35402010
Alignment:
Q  374 attttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattta 473  Q
    |||||| | |||||||||||||||||||| |||||||||| |||||||  || ||||||||| | ||||||| ||||||||||||||||| | |||||||    
T  35401740 attttagttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaattta 35401839  T
Q  474 caaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatg 573  Q
    ||||||||  ||||||||||| ||||||||||| ||||||||||||||||||||||||||  |||||||||||||||  |||||||||||| ||| || |    
T  35401840 caaaatgtcaatcaaatcagtccctccgttaagctggtctgttaacggaggtgacgtgtaacgttaacctcttacaaaccttaccacgtcagatgccacg 35401939  T
Q  574 caagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||  |||||||||||||||||||||||||||||||||| | |||||| || |||||||| |||||||    
T  35401940 caagcagggaccaaattgattgatttacagaaaattgccaagcaccaaattgatggattttcataaaattg 35402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 383 - 647
Target Start/End: Original strand, 20493827 - 20494092
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| ||| |||  || ||||||| ||| ||||||||||||||||||||||||    |||||||||||||||     
T  20493827 gactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatttacaaaatgtc 20493926  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  |    
T  20493927 aatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcaggg 20494026  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    |||||||||||||||||||| ||||||| |||||| |||||| || ||||||||||||||||||||    
T  20494027 accaaattgattgatttacataaaattggcaaggaccaaattgatggattttcagaaaattgtcaa 20494092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 380 - 643
Target Start/End: Complemental strand, 54387973 - 54387711
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    |||||| |||| || |||||||| ||| |||||| |||||||| || |||| || | ||| ||||||||||||||||||||||| |||||||||||||||    
T  54387973 atagaccaatatcttaaattcgtccttaaatttttaaaaatcagccaaattagttcctaa-ttttgcgaaatatctatttagtcctcgaatttacaaaat 54387875  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    || |||||||||||| | |||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| ||| || |||||||    
T  54387874 gtccatcaaatcagttcatccgttaagttggtctgttaacggaggtga-gtgtaccgttaacctcttacaaggcttaccacgtcaaatgccacgcaagca 54387776  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
      ||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  54387775 gggactaaactgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattg 54387711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 43507167 - 43507462
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  43507167 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43507266  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  |    
T  43507267 aatcaaatcagtccctccgttaagttggactgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcaggg 43507366  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  43507367 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 43507462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 393 - 623
Target Start/End: Original strand, 39345574 - 39345805
Alignment:
Q  393 tcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatca 492  Q
    |||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||| ||||||||||   |||||||||||||||  |||||||||    
T  39345574 tcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatttacaaaatgtcaatcaaatca 39345673  T
Q  493 gtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattga 591  Q
    ||  ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||| | | ||| ||  ||||||  |||||||||||    
T  39345674 gtctctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacataagatgccacacaagcagggaccaaattga 39345773  T
Q  592 ttgatttacagaaaattgccaaggatcaaatt 623  Q
    ||||||||||||||||||||||||||||||||    
T  39345774 ttgatttacagaaaattgccaaggatcaaatt 39345805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 320989 - 320694
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||| ||||| |||||||||||||||| | |||||| | ||| |||||||||||     
T  320989 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccttgaaattacaaaatgtc 320890  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||| ||||| ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  320889 aatcaactcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 320790  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  320789 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 320694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 43508742 - 43508447
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 43508643  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||| ||||||||| |||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  43508642 aatcaaatcagtccctccgttaagttggcctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 43508543  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  43508542 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 43508447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 33266099 - 33265804
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||| |||||||||||||||||||||| |||||||  |  | ||||| | | |||||||||||||||| | ||||||   |||||||||||||||     
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33266000  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||| |||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  33265999 aatcaaatcagtccctccgttaagttagtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 33265900  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33265899 accaaactgattgatttacataaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33265804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 51013975 - 51013714
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||||| ||||||| | | ||||   |||||||||||||||     
T  51013975 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaatgagtccctgaatttacaaaatgtc 51013876  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  51013875 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 51013776  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||| ||||||| |||||| ||||||| |||||| || |||||| |||||||||    
T  51013775 accaaactgattaatttacacaaaatttccaaggaccaaattgatggatttttagaaaattg 51013714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 4173829 - 4173534
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||| ||     
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaacgtc 4173730  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||| ||||| ||||||||||||||| |||||||||||||||||||||   |||||| ||| |||| ||||||||||||| ||| || |||||||  |    
T  4173729 aatcaactcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacatctgacaaagcttaccacgtcagatgccacgcaagcaggg 4173630  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| | |||||||||    
T  4173629 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatttttagaaaattg 4173534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 388 - 677
Target Start/End: Complemental strand, 43521193 - 43520903
Alignment:
Q  388 atacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatca 487  Q
    |||||||||||| ||||||||||||| ||||||||  | | |||||  || |||||||||||||||| | ||||||   |||||||||||||||  ||||    
T  43521193 atacctcaaatttgttcttgaattttgaaaaatcagtcaatttcgtttttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtcaatca 43521094  T
Q  488 aatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaa 586  Q
    ||||||| | |||||||||||| |||||||||| |||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||    
T  43521093 aatcagttcttccgttaagttgttctgttaacgtaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaa 43520994  T
Q  587 attgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    | ||||||||||||| ||||||  |||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| |||||||    
T  43520993 actgattgatttacacaaaattttcaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattg 43520903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 33264382 - 33264678
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||||| ||||||| | |||||    |||||||||||||||     
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatttacaaaatgtc 33264481  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcat-g 581  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || | |||||| |    
T  33264482 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgtaagcatgg 33264581  T
Q  582 accaaattgattgatttacagaaaa-ttgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||  |||| || | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33264582 accaaactgattgatttacgcaaaattttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33264678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 319273 - 319568
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | |||||    |||||||||||||||     
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgtc 319372  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||| |||| |||||||||||||||||||||||| ||||||||||||   |||||||||| ||||  |||||||||||| |||||| |||||||  |    
T  319373 aatcaaaccagtccctccgttaagttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaaacttaccacgtcagatgtcacgcaagcaggg 319472  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| ||  |||| || ||||||  |||||| |||||||||  ||| |||||||||||    
T  319473 accaaactgattgatttacacaaaatttcgaaggacgaaattgatgtatttacacaaaatttccaaggaccaaattgatgaattttcagaaaattg 319568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 387 - 609
Target Start/End: Original strand, 11254123 - 11254345
Alignment:
Q  387 aatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatc 486  Q
    |||||||||||||||| |||||||||| |||||||  || ||| ||||  |||||||||||||||| || ||| ||| | |||||||||||||||  |||    
T  11254123 aatacctcaaattcgtccttgaatttttaaaaatcggccaaatccgtctctaaattttgcgaaatagctcttttgtccttgaatttacaaaatgtcaatc 11254222  T
Q  487 aaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacca 585  Q
    |||||||| |||||||||||||||| ||||||||||||||| |||||  ||| | ||||||||||||||||||||||| ||| ||||||||||  |||||    
T  11254223 aaatcagtccctccgttaagttggtttgttaacggaggtgatgtgtaacgtt-atctcttacaaggcttaccacgtcagatgccatgcaagcagggacca 11254321  T
Q  586 aattgattgatttacagaaaattg 609  Q
    ||||||| ||||| || |||||||    
T  11254322 aattgatggattttcataaaattg 11254345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 383 - 676
Target Start/End: Complemental strand, 5439736 - 5439442
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||| | ||||||||| |  |||||   |||||||||||||||     
T  5439736 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5439637  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  |    
T  5439636 aatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcaggg 5439537  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    ||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  5439536 accaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggatcaaattgatggattttcagaaaatt 5439442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 383 - 610
Target Start/End: Complemental strand, 42982541 - 42982313
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||| | |||||  | |||||||||| |||||||   | ||||||||| | ||||||||||||||  ||||| ||| | |||||||||||||||     
T  42982541 gactaatacgttaaatttttccttgaatttttaaaaatctgtcaaattcgtccctgaattttgcgaaatagttattttgtccttgaatttacaaaatgtc 42982442  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||| |||||||||||||||||||||  ||| |||| ||||||| |||||||||||| ||| ||  ||||||  |    
T  42982441 aatcaaatcagtccctccgttaagttggtgtgttaacggaggtgacgtgtaacgttgaccttttacaagccttaccacgtcagatgccacacaagcaggg 42982342  T
Q  582 accaaattgattgatttacagaaaattgc 610  Q
    |||||||||||||||||| ||||||||||    
T  42982341 accaaattgattgatttagagaaaattgc 42982313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 383 - 676
Target Start/End: Original strand, 833223 - 833517
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||| | ||||||||| |  |||||   |||||||||||||||     
T  833223 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 833322  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  |    
T  833323 aatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcaggg 833422  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    |||||||||||  ||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  833423 accaaattgatgaatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 833517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 383 - 676
Target Start/End: Complemental strand, 835131 - 834837
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| ||||||| ||| | || |||| | |||| | ||||||||| |  |||||   |||||||||||| ||     
T  835131 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaattttgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaacgtc 835032  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  |    
T  835031 aatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcaggg 834932  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    ||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  834931 accaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 383 - 676
Target Start/End: Original strand, 5437811 - 5438105
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  |  | ||||||| | |||| | ||||||||| |  |||||   |||||||||||||||     
T  5437811 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 5437910  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || || ||||||| ||| || |||||||  |    
T  5437911 aatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaacacgtcagatgccacgcaagcaggg 5438010  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    ||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  5438011 accaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 5438105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 382 - 564
Target Start/End: Original strand, 4169685 - 4169867
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||||||||||||| |||||||||| ||||||  | | | ||||||  | |||||||||||||||| | ||||||   |||||||||||||||    
T  4169685 agactaatacctcaaattcgtccttgaattttgaaaaattgatcaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 4169784  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 564  Q
      |||||| |||| ||||||||||||||||||||||| |||||||||||||   |||||||||| |||| |||||||||||||    
T  4169785 caatcaaaccagtccctccgttaagttggtctgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtca 4169867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 386 - 564
Target Start/End: Original strand, 2691377 - 2691554
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||||||| ||| | ||||||||||||||||||| || |||||||||  ||||||||| ||||||||||||||||   ||||||  |||||||  ||    
T  2691377 taatacctcaacttcat-cttgaattttcaaaaatcagccaaattcgtccacaaattttgcaaaatatctatttagtccctgaatttttaaaatgtcaat 2691475  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 564  Q
    |||||||||   ||||||||||||| ||||||| |||||||| ||| || ||||| | |||||||| ||||||||||||    
T  2691476 caaatcagtcaatccgttaagttggcctgttaagggaggtgatgtgcatcgttaatcgcttacaagacttaccacgtca 2691554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 384 - 560
Target Start/End: Original strand, 20819986 - 20820156
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttc 483  Q
    ||||||||||||| ||||| |||||||||||||||||||  | ||||  | | |||||||||| |||||| |||||||||   |||||| ||||||||      
T  20819986 actaatacctcaacttcgtccttgaattttcaaaaatcagtcaaatttattcctaaattttgcaaaatatttatttagtccctgaattttcaaaatgtca 20820085  T
Q  484 atcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccac 560  Q
    ||||||||||| | ||||||||||||| |||||||| ||||||||||      |||||| |||||||||||||||||    
T  20820086 atcaaatcagttcatccgttaagttggcctgttaacagaggtgacgt------ttaaccgcttacaaggcttaccac 20820156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 602 - 701
Target Start/End: Complemental strand, 11641959 - 11641860
Alignment:
Q  602 gaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 701  Q
    |||||||  ||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||  ||| |||||||||||||||||||| |||||||||    
T  11641959 gaaaattatcaaggatcaaattgattgatttacagaaaattgtcaaggaccaaattgattgatttacaggaaattgcaaaatttccaacgtctctttctc 11641860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 41761867 - 41761790
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| ||||||||||||||||||  || |||||||||  ||||||||||||||||||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtc 41761790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 48646855 - 48646918
Alignment:
Q  296 gtttgattaaaactattggacagttttcatctatatcgatgtaatattgttacaacaattacaac 360  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  48646855 gtttgattaaa-ctattggacagttttcatctatatcgatgtaatattgttgcaacaattacaac 48646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 625 - 703
Target Start/End: Complemental strand, 54387763 - 54387686
Alignment:
Q  625 attgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctcct 703  Q
    |||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  54387763 attgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgcaaaa-ttcccacgactctttctcct 54387686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 462
Target Start/End: Original strand, 48813787 - 48813866
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt 462  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||  ||| | |||||||| |||||| ||||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagt 48813866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 463
Target Start/End: Original strand, 49523125 - 49523204
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||  ||||||||| |||||||  |  ||||||||| | |||||||||||||||||||||||||    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtc 49523204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 7149542 - 7149615
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctattt 459  Q
    |||||| | |||||| | ||||||||||||||||||| |||||||| || |||||||||||||||||| |||||    
T  7149542 taatacataaaattcatccttgaattttcaaaaatcagccgaattcatctttaaattttgcgaaatatttattt 7149615  T

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Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 382 - 463
Target Start/End: Original strand, 51011925 - 51012006
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||| ||||||||||| |||||||||| |||||||   | ||||| | ||| |||||||||||||||||||||||||    
T  51011925 agactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtc 51012006  T

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Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 581 - 677
Target Start/End: Original strand, 4172311 - 4172407
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || |||||| ||||||| ||||||||| |||| |||||||||||    
T  4172311 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaattttcaaggaccaaattgatggattttcagaaaattg 4172407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 469 - 533
Target Start/End: Original strand, 41759492 - 41759556
Alignment:
Q  469 atttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgta 533  Q
    |||||||||||||  |||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  41759492 atttacaaaatgtcaatcaaatcagtcactccgttaagttggtctgtcaacagaggtgacgtgta 41759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 43519424 - 43519504
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtc 43519504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 489
Target Start/End: Complemental strand, 2693373 - 2693271
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||||||| |||||  ||||||||| |||||||| || ||||  | | ||||||||||||||||||||||||||| | ||||||  ||||||| |||    
T  2693373 taatacctcaacttcgtctttgaattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaattt-taaaatgtccat 2693275  T
Q  486 caaa 489  Q
    ||||    
T  2693274 caaa 2693271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 584 - 643
Target Start/End: Complemental strand, 11641943 - 11641884
Alignment:
Q  584 caaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||| ||| ||||||    
T  11641943 caaattgattgatttacagaaaattgtcaaggaccaaattgattgatttacaggaaattg 11641884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 460
Target Start/End: Complemental strand, 35404569 - 35404492
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctattta 460  Q
    ||||||||||||| |||| | |||||||||| |||||||  |  ||||||||||| ||||||||||||||| ||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttattta 35404492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 41781539 - 41781619
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| ||||||||||||| |||||||   | |||| |||| | |||||||| |||||| |||||||||    
T  41781539 gactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtc 41781619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 48646850 - 48646791
Alignment:
Q  404 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||| ||| |  ||||||||||| ||||| |||||||||||||||||||    
T  48646850 cttgaattttcaaaagtcagctaaattcgtccttgaatttagcgaaatatctatttagtc 48646791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 618 - 677
Target Start/End: Complemental strand, 49524620 - 49524561
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| | |||||||||    
T  49524620 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttgagaaaattg 49524561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 422
Target Start/End: Original strand, 11601674 - 11601710
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatca 422  Q
    |||||||| ||||||||||||||||||||||||||||    
T  11601674 taatacctaaaattcgttcttgaattttcaaaaatca 11601710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 677
Target Start/End: Original strand, 20494029 - 20494088
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| |||||||||||    
T  20494029 caaattgattgatttacataaaattggcaaggaccaaattgatggattttcagaaaattg 20494088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 52868252 - 52868193
Alignment:
Q  404 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||| |||||||   | ||||||||  |||||||||||||||||||||||||||    
T  52868252 cttgaattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtc 52868193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 581 - 610
Target Start/End: Original strand, 2691606 - 2691635
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgc 610  Q
    ||||||||||||||||||||||||||||||    
T  2691606 gaccaaattgattgatttacagaaaattgc 2691635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 380 - 731
Target Start/End: Complemental strand, 10570011 - 10569659
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    ||||||||||||||||||||||| |||||||||| |||||||| || ||||||||| | |||||||| |||||||||||||||| |||||||||||||||    
T  10570011 atagactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagtcctcgaatttacaaaat 10569912  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    || |||||||||||| ||||||| || ||||||||||||||||||||||||||| ||||||||||||||  ||||||||| |||| ||| || |||||||    
T  10569911 gtccatcaaatcagtccctccgtcaaattggtctgttaacggaggtgacgtgtactgttaacctcttacgtggcttaccatgtcagatgccacgcaagca 10569812  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
      || |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||     
T  10569811 gggatcaaattgattgatttacagaaaattgccaaagaccaaattgattgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattgt 10569712  T
Q  679 aaaatttccaacgactctttctccttttcaagctctatgtacaatgatgatgt 731  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  10569711 aaaattcccaacgactctttctcctcttcaagctctatgtacaatgatgatgt 10569659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 386 - 701
Target Start/End: Original strand, 21068628 - 21068944
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||||||||||||| ||||||||||||| |||||  | |||||||||  ||||||| |||||||||||||||||| |||||||||||||||||  ||    
T  21068628 taatacctcaaattcgtccttgaattttcaacaatcagtcaaattcgtccacaaattttacgaaatatctatttagtcctcgaatttacaaaatgtcaat 21068727  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atgacc 584  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||| || ||| |||||| | ||||    
T  21068728 caaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtactgttaatctcttacaaggcttaccacgtcagatatcacgcaagcaaggacc 21068827  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatt 684  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||| ||| ||||||| ||||||    
T  21068828 aaattgattgatttatagaaaattgccaaggaccaaattgattgattttcagaaaattgtcaagaatcaaattgattgattttcacaaaattgaaaaatt 21068927  T
Q  685 tccaacgactctttctc 701  Q
    |||||||||||||||||    
T  21068928 tccaacgactctttctc 21068944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 373 - 642
Target Start/End: Complemental strand, 6902996 - 6902727
Alignment:
Q  373 tattttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  | ||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  6902996 tattataaaagactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccctaaattttgcgaa-tatctatttagtcctcgaattt 6902898  T
Q  473 acaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcat 572  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||| ||||||     
T  6902897 acaaaatgtccatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaccgttaacctcttacaagacttaccacgtcagatgtcac 6902798  T
Q  573 gcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 642  Q
    |||||||  ||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||    
T  6902797 gcaagcagagaccaaattgattgatttacagaaaattgtcaaggactaaattgattgattttcagaaaatt 6902727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 383 - 655
Target Start/End: Complemental strand, 9400124 - 9399851
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| ||||||||  | ||||| ||||| |||||||||||||||||| ||||||  |||||||||||||| |     
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaatttacaaaatatc 9400025  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||||||||  ||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||| | ||| || |||||||  |    
T  9400024 aatcaaatcagtctctccgttaagttggtctgttaacagaggtgacgtgtaacgttaacctcttacaaggcttaccacgttagatgccacgcaagcaggg 9399925  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaa 655  Q
    ||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||||    
T  9399924 acctaattgattgatttacagaaaattgtcaaggatcaaattgattgattttcagaaaattgccaaggaccaaa 9399851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 427 - 701
Target Start/End: Original strand, 21045354 - 21045629
Alignment:
Q  427 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 526  Q
    |||||||||  ||||||| ||||||||||||||||||  ||||||||||||||||  ||||||||||| | ||||||||||| | ||| ||| |||||||    
T  21045354 aattcgtccacaaattttacgaaatatctatttagtccccgaatttacaaaatgtcaatcaaatcagtccatccgttaagttagcctggtaatggaggtg 21045453  T
Q  527 acgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaa 625  Q
    ||||||| |||||| ||||||||||||||||||||||| || ||| |||||||  |||||||||||||||||||   ||||||| |||||| |||||| |    
T  21045454 acgtgtactgttaatctcttacaaggcttaccacgtcagatatcacgcaagcagggaccaaattgattgatttattaaaaattgtcaaggaccaaattga 21045553  T
Q  626 ttgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 701  Q
    ||||||||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  21045554 ttgattttcagaaaattgtcaagaatcaaattgattgattttcataaaattgcaaaatttccaacgactctttctc 21045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 7051334 - 7051073
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||| |||||||   ||||||||| ||||||||  | ||||||||  | ||||||||||||||||||||||||  ||||||||| ||||| |     
T  7051334 gactaataccttaaattcgaatttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtactcgaatttataaaatatc 7051235  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
    ||  |||| ||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||  |    
T  7051234 cactaaattagtccctccattaagttggtctgttaacggaggtgacgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcaggg 7051135  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7051134 accaaattgattgatttacagaaaattgccaaggaacaaattgattgattttcagaaaattg 7051073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 382 - 677
Target Start/End: Complemental strand, 32518587 - 32518291
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||||||||||||| |||||||||| |||||||  || | ||| ||| | |||||||||||||||| | ||||||   |||||||||||||||    
T  32518587 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 32518488  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||||      
T  32518487 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 32518388  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  32518387 gaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 32518291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 382 - 643
Target Start/End: Complemental strand, 11357284 - 11357024
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    |||||||||| |||||||||| |||||||||| |||||||   | ||||||||| | |||||||  ||||| | ||||||||   |||||||||||||||    
T  11357284 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgt 11357185  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
       |||||||||| |||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||||| |||||| |||||||      
T  11357184 cattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcaga 11357087  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||||||||||||||||||| |||||| || || |||||||||||||    
T  11357086 gaccaaattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattg 11357024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 383 - 647
Target Start/End: Complemental strand, 20525423 - 20525158
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| ||||||    | ||||| ||| | |||||||| ||||| |||||| ||| | |||||||||||||||     
T  20525423 gactaatacctcaaattcgtctttgaatttttaaaaataggtcaaattcatccctgaattttgcaaaatagctattttgtccttgaatttacaaaatgtc 20525324  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||| ||| ||  ||||||  |    
T  20525323 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgcaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcaggg 20525224  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||||||||||||||||||||||| |||||||| || |||||| || ||||||||||||||||||||    
T  20525223 accaaattgattgatttacagaacattgccaatgaccaaattgatggattttcagaaaattgtcaa 20525158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 369 - 643
Target Start/End: Original strand, 21091092 - 21091355
Alignment:
Q  369 tcaatattttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcga 468  Q
    ||||| ||||| | || ||||||||||||||||| ||||||||||||||||||||||            |||||   ||||||||||||||||||  |||    
T  21091092 tcaattttttagtcgagtaatacctcaaattcgtccttgaattttcaaaaatcaacc------------aaattacacgaaatatctatttagtccccga 21091179  T
Q  469 atttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatg 568  Q
    ||||| |||||||  ||||||||||| ||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||    
T  21091180 atttataaaatgtcaatcaaatcagtccctccattaagttggcctgttaacggaggtgacgtgtactgttaatctcttacaaggcttaccacgtcagatg 21091279  T
Q  569 tcatgcaagcat-gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||| |||||||| ||| ||||||||||||||| ||||||||| |||||| |||||| ||||||||||| |||||||    
T  21091280 tcacgcaagcatggactaaattgattgatttatagaaaattgtcaaggaccaaattgattgattttcataaaattg 21091355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 382 - 677
Target Start/End: Complemental strand, 18645193 - 18644898
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||||||||||||| |||||||||| |||||||   | ||||||||  | |||||||||||||||| | ||||||   |||||||||||||||    
T  18645193 agactaatacctcaaattcgtccttgaattttgaaaaatcggac-aattcgtctctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgt 18645095  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||  |||||||||| | |||||| |||||||      
T  18645094 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgtaacgttaacctctgacaaaacttaccacgttagatgtcacgcaagcagg 18644995  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||| |||| |||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| |||||||    
T  18644994 gaccaaactgatcgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattg 18644898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 400 - 609
Target Start/End: Original strand, 33267078 - 33267288
Alignment:
Q  400 cgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctc 499  Q
    |||||||| ||||| |||||| || | ||||||| || |||||||||||||||||||||||||   |||||||| |||||||  ||||||||||| | ||    
T  33267078 cgttcttgtatttttaaaaattaatcaaattcgttctcaaattttgcgaaatatctatttagttcccgaatttataaaatgtcaatcaaatcagtccttc 33267177  T
Q  500 cgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgattt 598  Q
    |||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || |||||||  ||||||||||||||||||    
T  33267178 cgttaaattggcctgttaacggaggtgacgtgtagtgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgattt 33267277  T
Q  599 acagaaaattg 609  Q
    ||| |||||||    
T  33267278 acacaaaattg 33267288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 13610690 - 13610941
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc-atcgaatttacaaaatgt 481  Q
    ||||||||||| |||||||| |||||||||| ||||||| | | |||| |||| | |||||||||||||||| | |||||| ||  ||||||||||||||    
T  13610690 gactaataccttaaattcgtccttgaattttgaaaaatcgatcaaatttgtccctgaattttgcgaaatatcaaattagtccat--aatttacaaaatgt 13610787  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg 581  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| || |||| |       
T  13610788 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaaccccttacaaggcttaccacgtcagatgacacgcaaac--- 13610884  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||     ||||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  13610885 acca-----attgatttacaaaaaatttccaaggaccaaattgatggattttcagaaaattg 13610941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 32454248 - 32454542
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||||| |||||| ||||||||| | ||||||   |||||||||||||||     
T  32454248 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccttgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 32454347  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  32454348 aatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgccacgcaagcagag 32454447  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||  || ||||| || ||||||  |||||| |||||||||  ||| |||||||||||    
T  32454448 accaaactgattgatttacacaaaatttcgaaggacgaaatcgatagatttacacaaaatt-ccaaggaccaaattgatgaattttcagaaaattg 32454542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 3480746 - 3480452
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||||| ||||||||| |  |||||   |||||||||||||||     
T  3480746 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaactagtccctgaatttacaaaatgtc 3480647  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   ||||| |||| |||| ||||||||||||| ||| || |||||||  |    
T  3480646 aatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaatctctgacaaagcttaccacgtcagatgccacgcaagcaggg 3480547  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  3480546 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 3480452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 383 - 613
Target Start/End: Original strand, 7371175 - 7371406
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||| ||||| ||||||||||||||||||  || |||| |||| | ||||||||||||||  ||||| ||| | ||||||| |||||||     
T  7371175 gactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaatagatattttgtccttgaatttataaaatgtc 7371274  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||| ||||||||||||||||| ||||||||||||||   ||||||||||| ||| |||||||||||| ||  || |||||||  |    
T  7371275 aatcaaatcagtccctcctttaagttggtctgttaaaggaggtgacgtgtaacattaacctcttataagacttaccacgtcagataccacgcaagcaggg 7371374  T
Q  582 accaaattgattgatttacagaaaattgccaa 613  Q
    ||||||||||| ||||| | ||||||||||||    
T  7371375 accaaattgatggattttccgaaaattgccaa 7371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 467 - 677
Target Start/End: Original strand, 32437211 - 32437422
Alignment:
Q  467 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 566  Q
    ||||||||||||||   ||||||||| | |||||||||||||||| ||||||||||| |||||||||  |||||||||| |||| ||||||||||||| |    
T  32437211 gaatttacaaaatgccaatcaaatcaatccctccgttaagttggtatgttaacggagatgacgtgtaacgttaacctctgacaaagcttaccacgtcaga 32437310  T
Q  567 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 665  Q
    |  || |||||||  ||||||| ||||||||||||| || ||| || |||| |||||| || ||||| || |||||| ||| ||| ||||||||| ||||    
T  32437311 taccacgcaagcagggaccaaactgattgatttacacaacatttccgaggaccaaattgatggatttacacaaaattttcacggaccaaattgatggatt 32437410  T
Q  666 atcagaaaattg 677  Q
     |||||||||||    
T  32437411 ttcagaaaattg 32437422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 618 - 731
Target Start/End: Complemental strand, 7051132 - 7051019
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctccttttcaagctctatg 717  Q
    |||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||| || |||||||| |||||||||||||    
T  7051132 caaattgattgatttacagaaaattgccaaggaacaaattgattgattttcagaaaattgcaaaattcccaacggctatttctcctcttcaagctctatg 7051033  T
Q  718 tacaatgatgatgt 731  Q
    || |||||||||||    
T  7051032 taaaatgatgatgt 7051019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 387 - 643
Target Start/End: Original strand, 33276805 - 33277053
Alignment:
Q  387 aatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatc 486  Q
    |||| ||||| ||||| |||||||||| ||||||||  | |||||||   |||||||||||||||||||||||||     ||||||| |||||||  |||    
T  33276805 aataactcaacttcgtccttgaattttaaaaaatcagtcaaattcgtttctaaattttgcgaaatatctatttagct---gaatttataaaatgtcaatc 33276901  T
Q  487 aaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatgaccaa 586  Q
    |||||||| |||||||    |||   |||||||||||||||| |||| |||||| |||||| ||| || ||||||||| |||||| |   ||  ||||||    
T  33276902 aaatcagttcctccgta---ttgacatgttaacggaggtgacatgtactgttaatctcttataagactgaccacgtcagatgtcacgtttgc--gaccaa 33276996  T
Q  587 attgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||| |||||||||  |||||||||||| |||||||||||||||||||    
T  33276997 attgattgatttatagaaaattgtaaaggatcaaattgattgattttcagaaaattg 33277053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 404 - 579
Target Start/End: Original strand, 14337687 - 14337861
Alignment:
Q  404 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 503  Q
    ||||||||||  ||||||| || ||||  |||| ||||||||| |||| |||| ||  |   |||||||||||||| |  ||||||||||| ||||| ||    
T  14337687 cttgaattttttaaaatcagccaaatttatcctcaaattttgcaaaatgtctaattcattcccgaatttacaaaatatcaatcaaatcagtccctccatt 14337786  T
Q  504 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||||||| |||||||| |||||||| |||| | |||||||||||||| |||||||| |||| |||||| |||||||    
T  14337787 aagttggcctgttaacagaggtgacatgtactattaacctcttacaa-gcttaccatgtcagatgtcacgcaagca 14337861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 618 - 700
Target Start/End: Complemental strand, 6902785 - 6902703
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttct 700  Q
    |||||| |||||||| |||||||||||||||||  ||||||||||||| |||||||||| ||||||| |||||||||||||||    
T  6902785 caaattgattgatttacagaaaattgtcaaggactaaattgattgattttcagaaaattacaaaattcccaacgactctttct 6902703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 619 - 701
Target Start/End: Original strand, 21091297 - 21091379
Alignment:
Q  619 aaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 701  Q
    ||||| ||||||||  |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||| |||||||||    
T  21091297 aaattgattgatttatagaaaattgtcaaggaccaaattgattgattttcataaaattgcaaaatttccaacggctctttctc 21091379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 8605416 - 8605351
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgc 446  Q
    |||||||||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||||    
T  8605416 tagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctaaattttgc 8605351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 6899485 - 6899565
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| || |||||||||||||||||||  | ||||||||  ||||||||| |||||||||||||||||    
T  6899485 gactaatacctcaaatttgtccttgaattttcaaaaatcagtcaaattcgtctctaaattttgtgaaatatctatttagtc 6899565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 33276994 - 33277066
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 690  Q
    |||||| ||||||||  |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  33276994 caaattgattgatttatagaaaattgtaaaggatcaaattgattgattttcagaaaattgcaaaatttccaac 33277066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 463
Target Start/End: Original strand, 10568403 - 10568479
Alignment:
Q  387 aatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||| |||||||||| |||||||||||||||||||  | ||||||||||| ||||| ||||||||| |||||||||    
T  10568403 aatacatcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtc 10568479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 384 - 463
Target Start/End: Original strand, 20523367 - 20523446
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||| |||||||| | || |||||||||||||||   | ||||||||||| |||||||||||||||||||||||||    
T  20523367 actaatacatcaaattcttcctagaattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtc 20523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 620 - 678
Target Start/End: Complemental strand, 9399920 - 9399862
Alignment:
Q  620 aattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  9399920 aattgattgatttacagaaaattgtcaaggatcaaattgattgattttcagaaaattgc 9399862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 32439215 - 32439135
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| ||  ||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  32439215 gactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 32439135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 13613706 - 13613626
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||| |||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||| | ||||||    
T  13613706 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtc 13613626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 456
Target Start/End: Complemental strand, 14338584 - 14338526
Alignment:
Q  398 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatcta 456  Q
    ||||| |||||||||| |||||||| || |||||||||| |||||||||||||| ||||    
T  14338584 ttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtcta 14338526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 461
Target Start/End: Original strand, 32516877 - 32516955
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttag 461  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||| | ||||| ||||||||    
T  32516877 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttag 32516955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 7373079 - 7373002
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||  ||||||||| ||||||    | ||||||||| | ||||||||||||||| |||||||||    
T  7373079 taatacctcaaattcgtgattgaatttttaaaaattggtcaaattcgtccctgaattttgcgaaatatttatttagtc 7373002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 11357083 - 11357023
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| |||||||||| |||||| ||||||||| || | ||||||||||||    
T  11357083 caaattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattgc 11357023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 11355223 - 11355297
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatt 458  Q
    ||||||||||||||||||| |||||||||| |||||||   | ||||||||  | ||||||  ||||||||||||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctatt 11355297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 7049790 - 7049847
Alignment:
Q  387 aatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaatttt 444  Q
    |||| ||||||||| | ||||||||||||||||||| || ||||||||| | ||||||    
T  7049790 aatatctcaaattcttccttgaattttcaaaaatcagccaaattcgtccctgaatttt 7049847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 383 - 731
Target Start/End: Original strand, 48829356 - 48829707
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||||||||||||||| ||| || ||||  | | | ||||||||||||||||||||||||| ||| |||||||||||||     
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagtcctcggatttacaaaatgtc 48829455  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atg 581  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| | |||| |||||| | |    
T  48829456 catcaaatcagtccctcggttaagttggtctgttaacggaggtgaagtgtactgttaacctcttacaaggcttaccacgtcagaggtcacgcaagcaagg 48829555  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaa 681  Q
    |||||||||||||||||||||||||||| |||||| |||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  48829556 accaaattgattgatttacagaaaattgtcaaggaccaaattgaatgatttttagaaaattgtcaaggaacaaattgattgattttcagaaaattgcaaa 48829655  T
Q  682 atttccaacgactc--tttctccttttcaagctctatgtacaatgatgatgt 731  Q
    ||| |||||| |||  |||||||| |||||||||||||||||||||||||||    
T  48829656 attcccaacggctctttttctcctcttcaagctctatgtacaatgatgatgt 48829707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 383 - 703
Target Start/End: Complemental strand, 51686483 - 51686162
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||| ||||||||||||||| || ||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagtcctcgaatttacaaaatgtt 51686384  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
    |||||||||||| |||| || |||||||| |||||||| ||||||||||||  ||||||||||||||| ||||||||||||| |||||| |||||||  |    
T  51686383 catcaaatcagtccctctgtcaagttggtatgttaacgaaggtgacgtgtaccgttaacctcttacaaagcttaccacgtcagatgtcacgcaagcaggg 51686284  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaa 681  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  51686283 accaaattgattgatttacagaaaattgccaaggaccaaattgatcgattttcagaaaattgccaaggaacaaattgattgattttcagaaaattgcaaa 51686184  T
Q  682 atttccaacgactctttctcct 703  Q
    ||| ||||| || |||||||||    
T  51686183 attcccaactaccctttctcct 51686162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 380 - 701
Target Start/End: Complemental strand, 611314 - 610992
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    ||||||||||||||||||||||| |||||||||| |||||||| || ||||||||| | |||||| ||||||| |||||||| |   |||||||||||||    
T  611314 atagactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatttacaaaat 611215  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||  ||||||| ||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| | ||| || |||||||    
T  611214 gtcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccacgttagatgccacgcaagca 611115  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
      || |||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  611114 gggatcaaattgattgatttacagaaaattgccaaggactaaattgatggattttcagaaaattgtcaaggaccaaattgattgattttcagaaaattgc 611015  T
Q  679 aaaatttccaacgactctttctc 701  Q
    ||||||  |||||| ||||||||    
T  611014 aaaattctcaacgattctttctc 610992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 383 - 703
Target Start/End: Complemental strand, 46114195 - 46113873
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaa-tcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||| |||||||||||  | |||||||||| ||||| ||  || |||| |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  46114195 gactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagtcattgaatttacaaaatgt 46114096  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      |||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||| |||| ||| || |||||||      
T  46114095 caatcaaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggtttaccatgtcagatgccacgcaagcaga 46113996  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaa 680  Q
    ||||||||||||||||||||||||||||| ||||||  ||||| || ||||||||||| |||| |||||| |||||||||||||| ||||||||||| ||    
T  46113995 gaccaaattgattgatttacagaaaattgtcaaggactaaattgatggattttcagaatattgccaaggaccaaattgattgattttcagaaaattgtaa 46113896  T
Q  681 aatttccaacgactctttctcct 703  Q
    ||||  |||||||||||||||||    
T  46113895 aattctcaacgactctttctcct 46113873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 386 - 643
Target Start/End: Complemental strand, 42282559 - 42282301
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||||||||||||| |||||||||||||||||||  | |||||||   | ||||||||||||||||||||||||| | |||||||||||||||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatttacaaaatgttcat 42282460  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
     |||||||| |||||||||||||||| ||||||| |||||||| ||||  ||||||||||||||||| ||||||||||| ||| || |||||||  ||||    
T  42282459 taaatcagtccctccgttaagttggtatgttaaccgaggtgacatgtaccgttaacctcttacaaggtttaccacgtcagatgccacgcaagcagggacc 42282360  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||| |||||||||    
T  42282359 aaattgattgatttacagaaaattgccaaggaccaaattgattgtttttaagaaaattg 42282301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 382 - 643
Target Start/End: Original strand, 23291569 - 23291830
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    |||||||||||| |||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||   |||||||||||||||    
T  23291569 agactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatttacaaaatgt 23291668  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| ||||||||||||| ||||||| || |||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||      
T  23291669 caatcaaatcagtccctccgttaagttagtctgtt-acagaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagg 23291767  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||| ||||||||||||||| | |||| |||||| || ||||||||||||||||    
T  23291768 gaccaaattgattaatttacagaaaattgtcgaggaccaaattgatggattttcagaaaattg 23291830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 384 - 643
Target Start/End: Complemental strand, 2379071 - 2378811
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttc 483  Q
    ||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||||| ||||| |||||||||| | |||||||||||||||      
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatttacaaaatgtca 2378972  T
Q  484 atcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tga 582  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||| |||||||  ||||||||||||| |||||| |||||||  ||    
T  2378971 atcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaatgttaacatcttacatagcttaccacgtcagatgtcacgcaagcaggga 2378872  T
Q  583 ccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||| ||||||||||||| || |||||| || ||||||||||||||||    
T  2378871 ccaaattgattgatttaaagaaaattgccaatgaccaaattgatggattttcagaaaattg 2378811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 393 - 643
Target Start/End: Complemental strand, 17517052 - 17516801
Alignment:
Q  393 tcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatca 492  Q
    |||||||||| ||||||||||||||||||   | ||||||| | | ||||||||||||||  ||||| ||| | |||||||||||||||  |||||||||    
T  17517052 tcaaattcgtccttgaattttcaaaaatcggtcaaattcgttcatgaattttgcgaaatagttattttgtccttgaatttacaaaatgtcaatcaaatca 17516953  T
Q  493 gtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattga 591  Q
    || |||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| ||| || |||||||  |||||||||||    
T  17516952 gtccctccgttaagttggtctattaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacgcaagcagggaccaaattga 17516853  T
Q  592 ttgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||| |||||| |||||| || ||||||||||||||||    
T  17516852 ttgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 17516801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 388 - 677
Target Start/End: Complemental strand, 2661992 - 2661702
Alignment:
Q  388 atacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatca 487  Q
    ||||||||||||||| |||||||||| ||||||| ||| | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||  ||||    
T  2661992 atacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccgtgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaatca 2661893  T
Q  488 aatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaa 586  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||  |||||||||| |||| ||||||||||||||||| ||||||||||  ||||||    
T  2661892 aatcagtccctccattaagttggtctgttaacagaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcatatgccatgcaagcagggaccaa 2661793  T
Q  587 attgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    | | ||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  2661792 actaattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 2661702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 380 - 643
Target Start/End: Complemental strand, 21350697 - 21350433
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    ||||||||||||||||||||| | | ||| ||||  ||||||  || |||||||   | |||||||||||||| |||||| ||| | |||||||||||||    
T  21350697 atagactaatacctcaaattcatccgtgatttttttaaaatcggccaaattcgttactgaattttgcgaaatagctattttgtccttgaatttacaaaat 21350598  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||  ||||||||||| |||||||||||||||| |||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||| |||||||    
T  21350597 gtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgtcgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagca 21350498  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
      |||||||||||||||||||||||||||||||||| | |||||| ||  |||||||||||||||    
T  21350497 gggaccaaattgattgatttacagaaaattgccaagaaccaaattgatgaattttcagaaaattg 21350433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 53094362 - 53094067
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  53094362 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53094263  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| ||||||| ||    
T  53094262 aatcaaatgagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcagtg 53094163  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||| ||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  53094162 accaaactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 53094067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 386 - 647
Target Start/End: Complemental strand, 54412633 - 54412371
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||| ||||||||||| | |||||||| ||||||    | ||||||||||| |||||||||| |||||||||||||    |||||||||||||||  ||    
T  54412633 taatatctcaaattcgtccgtgaattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatttacaaaatgtcaat 54412534  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||  |||||||| |||||| ||||||||||||| ||| || |||||||  ||||    
T  54412533 caaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaaccttttacaatgcttaccacgtcagatgccacgcaagcagggacc 54412434  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    |||||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||    
T  54412433 aaattgattgatttacagaaaattgccaaggaccaaattgatggattttcataaaattgtcaa 54412371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 30598337 - 30598598
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||||||||||||||||||   | |||| |||| | |||||||||||||| |||||| ||| | |||||||||||||||     
T  30598337 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattttgtccttgaatttacaaaatgtc 30598436  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||| |||||||| ||  || |||||||  |    
T  30598437 aatcaaattagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaaactcttacaaggcttgccacgtcagataccacgcaagcagag 30598536  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||| |||||||||||||||||||| ||| || |||||| || ||||||||||||||||    
T  30598537 accaaatagattgatttacagaaaattgtcaatgaccaaattgatggattttcagaaaattg 30598598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 375 - 677
Target Start/End: Original strand, 3150244 - 3150547
Alignment:
Q  375 ttttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttac 474  Q
    |||| ||||||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   ||||||||    
T  3150244 tttttatagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttac 3150343  T
Q  475 aaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgc 574  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||||| ||||||||||  |||||||||| |||| | ||||||||||| ||| || ||    
T  3150344 aaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgc 3150443  T
Q  575 aagc-atgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaa 673  Q
    ||||   ||||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||    
T  3150444 aagcggagaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaa 3150543  T
Q  674 attg 677  Q
    ||||    
T  3150544 attg 3150547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 381 - 677
Target Start/End: Complemental strand, 38193601 - 38193304
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatg 480  Q
    |||||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   ||||||||||||||    
T  38193601 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 38193502  T
Q  481 ttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca- 579  Q
    |  ||||||||||| | ||||||||||||||||||||||||||||||| |||   |||||||||| |||| ||||||||||||| ||| || |||||||     
T  38193501 tcaatcaaatcagtccatccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcag 38193402  T
Q  580 tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
     ||||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  38193401 ggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 38193304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 44267981 - 44268242
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||||||||||||||||||  || ||||| ||  | |||||||||||||| |||||| ||| | ||||||| |||||||     
T  44267981 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattttgtccttgaatttataaaatgtc 44268080  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||| ||||||| |||||||||||  || || | |||||  |    
T  44268081 aatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcctacaaggtttaccacgtcagttgccacgtaagcaggg 44268180  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||| ||||||||||||||||||||||||| |||||| || || ||| |||||||||    
T  44268181 accaaattggttgatttacagaaaattgccaaggaccaaattgatggacttttagaaaattg 44268242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 374 - 677
Target Start/End: Complemental strand, 46310534 - 46310230
Alignment:
Q  374 attttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattta 473  Q
    ||||||| |||||||||||||||||||||  ||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||    
T  46310534 attttaaaagactaatacctcaaattcgtctttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattta 46310435  T
Q  474 caaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatg 573  Q
    ||||||||  |||||| |||| |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |    
T  46310434 caaaatgtcaatcaaaccagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacg 46310335  T
Q  574 caagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaa 672  Q
    ||||||  ||||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||    
T  46310334 caagcagggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaa 46310235  T
Q  673 aattg 677  Q
    |||||    
T  46310234 aattg 46310230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 46308807 - 46309102
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 46308906  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  46308907 aatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 46309006  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| | |||||||||    
T  46309007 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatttttagaaaattg 46309102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 41979441 - 41979180
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   ||||||||||||| |     
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatttc 41979342  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  41979341 aatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 41979242  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| ||||||  | |||| |||||| || ||||||||||||||||    
T  41979241 accaaactgattgatttacacaaaattttcgaggaccaaattgatggattttcagaaaattg 41979180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 46609149 - 46609444
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||| |||||||||||||||||||||| |||||||  || | ||||||| | ||||||| |||||||| | ||||||   |||||||||||||||     
T  46609149 gactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 46609248  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||| |||||||||||| |||||| |||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  |    
T  46609249 aatcaaatcagtccctacgttaagttggtttgttaatggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcaggg 46609348  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  46609349 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 46609444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 46611392 - 46611097
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| ||||||    | | ||||||| | |||||||||||||||| | ||||||   ||||||| |||||||     
T  46611392 gactaatacctcaaattcgtccttgaattttgaaaaatttgtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtc 46611293  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atg 581  Q
     ||||||||||| ||||||||||||||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| ||||||||| | |    
T  46611292 aatcaaatcagtccctccgttaagttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcaagg 46611193  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || |||||| ||||||| ||||||||| |||| | |||||||||    
T  46611192 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaattttcaaggaccaaattgatggatttttagaaaattg 46611097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 53187742 - 53188037
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||| || |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  53187742 gactaatacctcaaatttgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 53187841  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atg 581  Q
     ||||||||||| |||||||||||||| |||| ||||||||||||||||||  |||||||||| |||| | ||||||||||| ||| || ||||||   |    
T  53187842 aatcaaatcagtccctccgttaagttgatctggtaacggaggtgacgtgtaacgttaacctctgacaaagattaccacgtcagatgccacgcaagcggag 53187941  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  53187942 accaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 53188037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 7883328 - 7883589
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||| |||||  ||||||||| |||||||  || | ||||||| ||||||||| |||||||| | |||||    ||||||||||||| |     
T  7883328 gactaatacctcaatttcgtctttgaattttgaaaaatcggccaatttcgtccctaaattttgtgaaatatcaaattagttcctgaatttacaaaatttc 7883427  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  7883428 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 7883527  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || |||||||| |||||||    
T  7883528 accaaactgattgatttacacaaaatttccaaggaccaaattgatggattttcaaaaaattg 7883589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 35903825 - 35904086
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||| || |||||||||| |||||||| || | ||| ||| | |||||||| ||||||| | ||||||   |||||||||||||||     
T  35903825 gactaatacctcaaatttgtccttgaattttgaaaaatcagccaatttcatccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 35903924  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| ||||| ||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||| ||| ||| || |||||||  |    
T  35903925 aatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacatcagatgccacgcaagcaggg 35904024  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  35904025 accaaactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35904086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 54900163 - 54899902
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | || |||   |||||||||||||||     
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatttacaaaatgtc 54900064  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||| |||||||||||||||||||||  |||||| ||| |||| ||||||||||||| ||| || |||||||  |    
T  54900063 aatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacgtctgacaaagcttaccacgtcaaatgccacgcaagcagag 54899964  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| ||||||  |||||| |||||| || |||||| |||||||||    
T  54899963 accaaactgattgatttacacaaaattttcaaggaccaaattgatggatttttagaaaattg 54899902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 53092623 - 53092918
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  || |||||| ||||||   || | ||||||| | |||||||||||||||| | ||| ||   ||||||| |||||||     
T  53092623 gactaatacctcaaattcgtctttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttataaaatgtc 53092722  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| | ||||||||||| ||| || |||||||  |    
T  53092723 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagtttaccacgtcagatgccacgcaagcaggg 53092822  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| |||| || |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  53092823 accaaactgattgatttacacaaaatttccaatgaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 53092918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 383 - 623
Target Start/End: Original strand, 27897151 - 27897391
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||| ||||| |||||| ||||||  | | ||||||||| | |||||||| || || ||||||||||   ||||||||||||| |     
T  27897151 gactaatacctcaaattctttcttaaattttaaaaaatggatcaaattcgtccatgaattttgc-aattagctatttagtctctgaatttacaaaatatc 27897249  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| | |||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| ||||| |  |    
T  27897250 aatcaaattagtccatccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagtaggg 27897349  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaatt 623  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  27897350 accaaattgattgatttacagaaaattgccaaggaccaaatt 27897391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 44795979 - 44795684
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  |  | ||||| | | |||||||||||||||| | ||||||   ||||||||||||| |     
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaatttacaaaatatc 44795880  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     | ||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||||| |||| ||||||||||| | ||| || |||||||  |    
T  44795879 aaacaaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcaggg 44795780  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    | |||| ||||||||||||| |||||| ||||||| |||||| ||  |||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  44795779 atcaaactgattgatttacacaaaatttccaaggaccaaattgatgaatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 44795684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 439 - 623
Target Start/End: Complemental strand, 43767080 - 43766895
Alignment:
Q  439 aattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgtt 538  Q
    |||||||| ||||| |||||| ||| | |||||||||||||||  |||||||||||  |||||||| |||||||||||||||||||||| |||||  |||    
T  43767080 aattttgcaaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcactccgttacgttggtctgttaacggaggtgatgtgtaacgtt 43766981  T
Q  539 aacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaatt 623  Q
    ||||||||| |||||||||||||||| |||||| |||||||  |||||||||||||||||||| |||||||| |||||| ||||||    
T  43766980 aacctcttataaggcttaccacgtcaaatgtcacgcaagcagggaccaaattgattgatttacggaaaattgtcaaggaccaaatt 43766895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 38191895 - 38192178
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||| |||||| ||||||   || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 38191994  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||| |||   |||||||||| |||| |||||||||            ||||||| ||    
T  38191995 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacatgtcacgttaacctctgacaaagcttaccac------------gcaagcagtg 38192082  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  |||||||| ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  38192083 accaaactgattgatttacacaaaatttcgaaggacgaaattaatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattg 38192178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 383 - 676
Target Start/End: Original strand, 28626411 - 28626705
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||   | | ||||||| | |||| | ||||||||| |  |||||   |||||||||||||||     
T  28626411 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 28626510  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  |    
T  28626511 aatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagcaggg 28626610  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    ||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  28626611 accaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 28626705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 27899225 - 27899145
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||||||||||| |||||||||||||||||||||||||    
T  27899225 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtc 27899145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 53190904 - 53190823
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  53190904 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 53190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 2226296 - 2226216
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 2226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 21348723 - 21348803
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| || |||||||||| |||||||  || ||||||||||| |||||||||||||||||||||||||    
T  21348723 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtc 21348803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 23293314 - 23293234
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| ||||||||||||  |||||||| || |||||| |||| |||||||||||||||||||||||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtc 23293234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 51684610 - 51684699
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||||||| ||||||||||| ||||||||||||||||||| || ||||| ||| | |||||||| |||||||||||||||| | ||||||    
T  51684610 gactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattt 51684699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 54898437 - 54898517
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  54898437 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 54898517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 618 - 701
Target Start/End: Complemental strand, 42282360 - 42282277
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctc 701  Q
    |||||| |||||||| |||||||||| |||||| ||||||||||| || | |||||||||||||||| |||||| |||||||||    
T  42282360 caaattgattgatttacagaaaattgccaaggaccaaattgattgtttttaagaaaattgcaaaattcccaacggctctttctc 42282277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 46112485 - 46112567
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||||| |||||||||| |||||||  || |||||||  || |||||||| ||||||||||||||||    
T  46112485 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtc 46112567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 392 - 571
Target Start/End: Complemental strand, 24846626 - 24846447
Alignment:
Q  392 ctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcga--atttacaaaatgttcatcaaa 489  Q
    ||||| ||||| |||| ||||| ||||||||    |||||||||| |||||||||||||||| |||||  | || |   |||| ||||||||  || |||    
T  24846626 ctcaatttcgtccttggatttttaaaaatcaggtaaattcgtcctcaaattttgcgaaatatatatttt-taatagtgtattttcaaaatgtcaattaaa 24846528  T
Q  490 tcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtca 571  Q
    ||||| |||||||||||||||  |||||||||||||||  |||| |||||||   ||||||||||||| |||||| ||||||    
T  24846527 tcagtccctccgttaagttgga-tgttaacggaggtgatatgtactgttaactgtttacaaggcttactacgtcaaatgtca 24846447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 2377032 - 2377109
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||| ||||||||||||||||  ||| ||||||||| | |||||||| ||| || |||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtc 2377109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 385 - 462
Target Start/End: Original strand, 43765139 - 43765216
Alignment:
Q  385 ctaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt 462  Q
    |||||||||||||||||| ||||||||||||||||||   | ||||||| |   ||||||||||||||||||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagt 43765216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 17516860 - 17516800
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  17516860 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 17516800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 30600062 - 30599982
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| ||| |||||| | |||||  || |||| |||| | |||||||||||||||||||||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtc 30599982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 2660218 - 2660301
Alignment:
Q  389 tacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||||||||||||| |||||||||| ||||||| ||| | ||||||| | |||||||||||||||| | |||||| | ||||||    
T  2660218 tacctcaaattcgtccttgaattttgaaaaatcgaccaatttcgtccctgaattttgcgaaatatcaaattagtccttgaattt 2660301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 17515308 - 17515390
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| | |||||||||| ||||||   || ||||| ||  | |||||||||||||||||||||||||    
T  17515308 tagactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtc 17515390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 42279510 - 42279587
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||  |||||||||||||||||| |  ||||||||    |||||||| ||||||||||||||||    
T  42279510 taatacctcaaattcgtcattgaattttcaaaaatcagctcaattcgtctcagaattttgcaaaatatctatttagtc 42279587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 600725 - 600805
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||| | |||||||||| ||||||| ||| |||| || | | |||||| | ||||||||||||||||    
T  600725 gactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaattttacaaaatatctatttagtc 600805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 41977750 - 41977830
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||| ||||| | ||||| |||||||||| | ||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtc 41977830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 551
Target Start/End: Original strand, 23875760 - 23875834
Alignment:
Q  477 aatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaag 551  Q
    |||||| ||||||||||| ||||  |||| ||| | |||||| ||||||||| |||||||||||||||| |||||    
T  23875760 aatgttaatcaaatcagtccctctattaacttgatatgttaatggaggtgacatgtattgttaacctctcacaag 23875834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 625 - 678
Target Start/End: Original strand, 30598546 - 30598599
Alignment:
Q  625 attgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||||| |||||||||||||| || ||||||||| |||| ||||||||||||    
T  30598546 attgatttacagaaaattgtcaatgaccaaattgatggattttcagaaaattgc 30598599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 647
Target Start/End: Complemental strand, 2378804 - 2378764
Alignment:
Q  607 ttgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  2378804 ttgccaaggatcaaattgatggattttcagaaaattgtcaa 2378764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 23291771 - 23291831
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| ||| |||| |||||||||||| |||| ||||||||| |||| ||||||||||||    
T  23291771 caaattgattaatttacagaaaattgtcgaggaccaaattgatggattttcagaaaattgc 23291831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 404 - 463
Target Start/End: Complemental strand, 35905835 - 35905776
Alignment:
Q  404 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  35905835 cttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 35905776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 383 - 421
Target Start/End: Complemental strand, 7884988 - 7884950
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatc 421  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatc 7884950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 214; Significance: 1e-117; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 379 - 731
Target Start/End: Original strand, 19581410 - 19581763
Alignment:
Q  379 aatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaa 478  Q
    |||||||||||||||||||||||| ||| |||||| |||||||| || |||| |||| | ||||||||||||||||||||||||| |||||||||| |||    
T  19581410 aatagactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagtcctcgaatttaccaaa 19581509  T
Q  479 tgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc 578  Q
    ||| ||||||||||||   ||||||||||| || |||||||||||||||| |||| | ||||| |||||||||||||||||||||| |||||| ||||||    
T  19581510 tgtccatcaaatcagtctttccgttaagtttgtatgttaacggaggtgacatgtactattaacttcttacaaggcttaccacgtcaaatgtcacgcaagc 19581609  T
Q  579 a-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |  |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||| ||||||| |||||||||||    
T  19581610 agggaccaaattgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgccaaggaccaaatttattgattttcagaaaattg 19581709  T
Q  678 caaaatttccaacgactctttctccttttcaagctctatgtacaatgatgatgt 731  Q
    |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||    
T  19581710 caaaattcacaacggctctttctcctcttcaagctctatgtacaatgatgatgt 19581763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 386 - 647
Target Start/End: Original strand, 19906685 - 19906947
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||||| |||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    ||||||||||||||  ||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccataatttacaaaatgtcaat 19906784  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||| ||| || |||| ||  ||||    
T  19906785 caaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgccacgcaaacagggacc 19906884  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||||||||    
T  19906885 aaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgtcaa 19906947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 383 - 647
Target Start/End: Original strand, 16376736 - 16377001
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| |||||||   | ||||||||| | |||||| ||||||| ||||||||||   ||||||||||||| |     
T  16376736 gactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatttacaaaatatc 16376835  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||||| ||||| ||||| || | ||  |||||||||||||||||||||||||||||||||||| |||||||  |    
T  16376836 aatcaaatcagtccctccgttaagttggtctattaacagaggtaacatttaacgttaacctcttacaaggcttaccacgtcatatgtcacgcaagcaggg 16376935  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    |||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||||||    
T  16376936 accaaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgtcaa 16377001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 39663154 - 39663413
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||| |||||||| |||||||||| |||||||   | ||||||||| | |||||||| ||||| ||||||||||   |||||||||||||||     
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatttacaaaatgtc 39663253  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| |||||||  |    
T  39663254 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcaggg 39663353  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    | |||||||||||||||||  | |||||||||||| |||||| || |||||||| |||||||    
T  39663354 atcaaattgattgatttac--ataattgccaaggaccaaattgatggattttcataaaattg 39663413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 39456869 - 39456608
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||| |||||||| | |||||||||| ||||||      ||||||||| | |||||||| ||||| ||||||||||   ||||||| |||||||     
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatttataaaatgtc 39456770  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| | ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||||  |    
T  39456769 aatcaaatcagtccatccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttaccacgtcatatgtcacgcaagcaggg 39456670  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||| ||||||||| ||||||  ||||| || ||||||||||||||||    
T  39456669 accaaattgattgatttatagaaaattgtcaaggactaaattgatggattttcagaaaattg 39456608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 383 - 647
Target Start/End: Original strand, 34400314 - 34400573
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||| | ||||||||||||||||||  || ||||| ||| | |||||||||||||| |||||| ||| | ||||||||||||| |     
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattttgtccttgaatttacaaaatatc 34400413  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatga 582  Q
     |||||||| || ||||||||||||||||||||||||||||||||  |||| |||| |||||||||||| |||||||||||| |||||| ||      ||    
T  34400414 aatcaaatcggtccctccgttaagttggtctgttaacggaggtgatatgtaatgttgacctcttacaagacttaccacgtcagatgtcacgc-----cga 34400508  T
Q  583 ccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    |||||||||||||||||||||||| || |||||| |||||| || | ||||||||||||||||||    
T  34400509 ccaaattgattgatttacagaaaaatgtcaaggaccaaattgatggtttttcagaaaattgtcaa 34400573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 386 - 647
Target Start/End: Complemental strand, 6799494 - 6799231
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttca- 484  Q
    ||||| ||||||||||| |||||||||| |||||||   | ||||||||| | |||||||| ||||| |||||| ||| | ||||||| ||||| ||||     
T  6799494 taatatctcaaattcgtccttgaatttttaaaaatcggacaaattcgtccatgaattttgccaaatagctattttgtccttgaatttataaaattttcaa 6799395  T
Q  485 tcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgac 583  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| || ||| || ||||| |  |||    
T  6799394 tcaaatcagtccctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggcttaccacgccagatgccacgcaagtagggac 6799295  T
Q  584 caaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||| |||||||||||| |||||||||||||||| |||||| || |||||||| |||||||||||    
T  6799294 caagttgattgatttagagaaaattgccaaggaccaaattgatggattttcaaaaaattgtcaa 6799231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 16764700 - 16764406
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| | |||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  16764700 gactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 16764601  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||| |||| ||||||||||||| ||||||||||||||||||||||||  |||||||||| |||| |||||||| |||| |||||| |||||||  |    
T  16764600 aatcaaaccagtccctccgttaagtt-gtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccatgtcagatgtcacgcaagcagag 16764502  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||   ||||| ||||||||| |||| |||||||||||    
T  16764501 accaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttctaaggaccaaattgatggattttcagaaaattg 16764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 440 - 643
Target Start/End: Original strand, 42517614 - 42517818
Alignment:
Q  440 attttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgtta 539  Q
    ||||| ||||||| |||||| ||| | |||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||  ||||    
T  42517614 attttacgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtcccttcgttaagttggtctgttaacggaggtgacgtgtaacgtta 42517713  T
Q  540 acctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaa 638  Q
    ||||| ||||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||||||||| |||||| |||||| || |||||||||||    
T  42517714 acctcatacaaggcttaccacgtcagatgccacgcaagcagggaccaaattgattgatttacagaaaattgtcaaggagcaaattgatggattttcagaa 42517813  T
Q  639 aattg 643  Q
    |||||    
T  42517814 aattg 42517818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 383 - 675
Target Start/End: Original strand, 24205598 - 24205891
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  24205598 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 24205697  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||| ||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| ||||||||||  |    
T  24205698 aatcaaattagtccctccgttcagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccatgcaagcaggg 24205797  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaat 675  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||    
T  24205798 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaat 24205891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 40561967 - 40561706
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| |||||||  || | ||||||  | ||||||| |||||| | | ||||||   |||||||||||||||     
T  40561967 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtctctgaattttgtgaaatagcaaattagtccctgaatttacaaaatgtc 40561868  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||||| || |||||||||||||||| |||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  40561867 aatcaaatcggtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 40561768  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||| || ||| ||||||| |||||| || ||||||||||||||||    
T  40561767 accaaattgattgatttacacaacatttccaaggaccaaattgatggattttcagaaaattg 40561706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 381 - 677
Target Start/End: Original strand, 14387347 - 14387644
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatg 480  Q
    |||||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   ||||||||||||||    
T  14387347 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatg 14387446  T
Q  481 ttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca- 579  Q
    |  ||||||| ||| |||||||||| || | ||||||| | ||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||     
T  14387447 tcaatcaaataagtccctccgttaaattagactgttaaagaaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcag 14387546  T
Q  580 tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
     ||||||| ||||||||||||| |||||| ||||||| |||||| || |||||    ||||||  |||||| ||||||||| |||| |||||||||||    
T  14387547 ggaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttaggcaaaatttccaaggaccaaattgatggattttcagaaaattg 14387644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 386 - 579
Target Start/End: Complemental strand, 37646564 - 37646371
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||| ||| |||||||||||| ||||||||||||  | |||||||||| ||||| ||||||||||||||||||||   |||||| |||||||   ||    
T  37646564 taataccccaacttcgttcttgaactttcaaaaatcagtcaaattcgtcctcaaattctgcgaaatatctatttagtccctgaattttcaaaatgccaat 37646465  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||||||||| |||| |||||||||| ||||||||||| ||||| |||| |||||||| ||||||||||||||||||||| |||||| |||||||    
T  37646464 caaatcagtccctctgttaagttggcctgttaacggacgtgacatgtactgttaaccgcttacaaggcttaccacgtcagatgtcacgcaagca 37646371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 2577569 - 2577275
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | ||||||  |||||||| | ||||||   |||||||||||||||     
T  2577569 gactaatacctcaaaatagtccttgaattttgaaaaatcgtccaatttcgtccctgaattttttgaaatatcaaattagtccctgaatttacaaaatgtc 2577470  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||| ||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  |    
T  2577469 aatcaaattagtccctccgttaatttggtctgttaacagaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcaggg 2577370  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| | ||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  2577369 accaaactaattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 2577275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 383 - 676
Target Start/End: Complemental strand, 37022274 - 37021981
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| ||||||| ||| | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  37022274 gactaatacctcaaaatagtccttgaattttgaaaaatcgaccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 37022175  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| |||||| ||||||||| |||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  37022174 aatcaaattagtccctccgttaatttggtccgttaacggaagtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcaggg 37022075  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    |||||| ||||||||||||| ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| ||||||    
T  37022074 accaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcacaaaatt 37021981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 441 - 647
Target Start/End: Complemental strand, 17698140 - 17697933
Alignment:
Q  441 ttttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaa 540  Q
    |||| ||||||| |||||| ||| | |||||||||||||||  |||||||||||  ||||||||||||| | | |||||||||||||||||||  |||||    
T  17698140 ttttccgaaatagctattttgtccttgaatttacaaaatgtcaatcaaatcagtctctccgttaagttgatatattaacggaggtgacgtgtaacgttaa 17698041  T
Q  541 cctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaa 639  Q
     |||||| ||| |||||||||| | |||||| |||||||  ||||||||| |||  ||||| |||||||| |||||| |||||| || ||||||||||||    
T  17698040 tctcttaaaagacttaccacgttagatgtcacgcaagcagggaccaaattaattagtttactgaaaattgtcaaggaccaaattgatggattttcagaaa 17697941  T
Q  640 attgtcaa 647  Q
    ||||||||    
T  17697940 attgtcaa 17697933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 582
Target Start/End: Complemental strand, 31475166 - 31474969
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaa-tgttca 484  Q
    ||||||||||| ||||||||| |||||||||||||||  | ||||||||   |||||||| |||||||||||||| ||   |||||| ||||| |||  |    
T  31475166 taatacctcaacttcgttctttaattttcaaaaatcagtcaaattcgtcaccaaattttgagaaatatctatttaatccctgaattttcaaaaatgtcaa 31475067  T
Q  485 tcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatga 582  Q
    ||||||| || |||| |||||||||   ||||||||||||||||||||| |||||||| ||||||| ||||||||||||| |||||| ||||||||||    
T  31475066 tcaaatcggtccctctgttaagttgacatgttaacggaggtgacgtgtactgttaaccgcttacaatgcttaccacgtcagatgtcacgcaagcatga 31474969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 383 - 601
Target Start/End: Original strand, 6783364 - 6783583
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||   | | ||||||| | |||| | | ||||||| | ||||||   |||||||||||||||     
T  6783364 gactaatacctcaaaatagtccttgaattttaaaaaatcggtcaatttcgtccctgaattattcaaaatatcaaattagtccctgaatttacaaaatgtc 6783463  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| | | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  |    
T  6783464 aatcaaattattccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagcaggg 6783563  T
Q  582 accaaattgattgatttaca 601  Q
    |||||| |||||||||||||    
T  6783564 accaaactgattgatttaca 6783583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 386 - 579
Target Start/End: Complemental strand, 162160 - 161968
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||| |||| ||||| |||||||||||||||||||  | |||||| ||  ||||||| | |||||||||||||||  | |||||| ||||| ||  ||    
T  162160 taatacttcaatttcgt-cttgaattttcaaaaatcagtcaaattcgaccccaaattttacaaaatatctatttagttcttgaattttcaaaacgtcaat 162062  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||||||  | | |||||||||||||||| |||||||||||||| ||||  ||||||| |||||||| |||||||||||| |||||| |||||||    
T  162061 caaatcgatccatccgttaagttggtctattaacggaggtgacatgtaccgttaaccgcttacaagacttaccacgtcagatgtcacgcaagca 161968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 383 - 489
Target Start/End: Complemental strand, 14389228 - 14389122
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  |||||||||||||||||  || ||||||||| | |||||||||||||||||||||||||   |||||| | ||||||     
T  14389228 gactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttccaaatgtc 14389129  T
Q  483 catcaaa 489  Q
    |||||||    
T  14389128 catcaaa 14389122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 374 - 463
Target Start/End: Original strand, 40560214 - 40560303
Alignment:
Q  374 attttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||| || ||||||||| ||||||||||  ||||||||| |||||||| || ||||||||| | |||||||||||||||||||||||||    
T  40560214 attttcattgactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtc 40560303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 16763076 - 16763156
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||    
T  16763076 gactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 16763156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 381 - 472
Target Start/End: Original strand, 37645485 - 37645576
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||| ||||||| ||| ||||| |||||||||| ||||||||  ||||||||||||||||||||  ||||||||||||||||| | ||||||    
T  37645485 tagagtaataccccaacttcgtccttgaatttttaaaaatcagtcgaattcgtccttaaattttaggaaatatctatttagtccttgaattt 37645576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 2766934 - 2767014
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||| ||||||||||| |||||||||| |||||||   | || |||||||| |||||||||||||||||||||||||    
T  2766934 gactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtc 2767014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 381 - 472
Target Start/End: Complemental strand, 19908393 - 19908301
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaatttt-caaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||||||||||||||||||||| ||||||||||  |||||||  || |||| |||| | ||||||||||||||||||||||||| | ||||||    
T  19908393 tagactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 19908301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 39664892 - 39664812
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || |||||||||   |||||| ||||||||||||||||||    
T  39664892 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtc 39664812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 381 - 463
Target Start/End: Original strand, 17696204 - 17696286
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||| ||||||||||||||||| ||||||||||||||||||  || ||||| ||| | |||||||  ||||||||||||||||    
T  17696204 tagattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtc 17696286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 44709895 - 44709809
Alignment:
Q  377 ttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||| |||||||||||||||||||| |||||||||| ||||| |  || |||||| || | |||||||||||||| ||||||||||    
T  44709895 ttaattgactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtc 44709809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 42517759 - 42517819
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  42517759 caaattgattgatttacagaaaattgtcaaggagcaaattgatggattttcagaaaattgc 42517819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 677
Target Start/End: Original strand, 16376938 - 16376997
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| |||||||||||    
T  16376938 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 16376997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 642
Target Start/End: Original strand, 6783592 - 6783649
Alignment:
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 642  Q
    |||||||| |||||||| |||||| ||||||| |||||| || |||||||||||||||    
T  6783592 aaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 6783649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 463
Target Start/End: Complemental strand, 42519346 - 42519269
Alignment:
Q  387 aatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtcctt-aaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||| |||||||||| ||||||  | | |||| |||||| || |||||| ||||||||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtc 42519269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 39456667 - 39456607
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| ||||||||  ||||||||||||||||  |||||||| |||| ||||||||||||    
T  39456667 caaattgattgatttatagaaaattgtcaaggactaaattgatggattttcagaaaattgc 39456607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 677
Target Start/End: Complemental strand, 17697996 - 17697937
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||||||  ||| | ||||||||||||||| ||||||||| |||| |||||||||||    
T  17697996 caaattaattagtttactgaaaattgtcaaggaccaaattgatggattttcagaaaattg 17697937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 677
Target Start/End: Original strand, 19906884 - 19906943
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| |||||||||||    
T  19906884 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 19906943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 677
Target Start/End: Original strand, 34400510 - 34400569
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||||| ||||||| ||||||||| ||||||||| | || |||||||||||    
T  34400510 caaattgattgatttacagaaaaatgtcaaggaccaaattgatggtttttcagaaaattg 34400569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 645 - 691
Target Start/End: Complemental strand, 31474939 - 31474893
Alignment:
Q  645 caaggaacaaattgattgattatcagaaaattgcaaaatttccaacg 691  Q
    |||||| ||||||||||||||  ||||||||||||||||| ||||||    
T  31474939 caaggaccaaattgattgatttacagaaaattgcaaaattcccaacg 31474893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 383 - 421
Target Start/End: Original strand, 42517558 - 42517596
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatc 421  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  42517558 gactaatacctcaaattcgtccttgaatttttaaaaatc 42517596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 581 - 610
Target Start/End: Complemental strand, 161931 - 161902
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgc 610  Q
    ||||||||||||||||||||||||||||||    
T  161931 gaccaaattgattgatttacagaaaattgc 161902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 581 - 610
Target Start/End: Complemental strand, 31474935 - 31474906
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgc 610  Q
    ||||||||||||||||||||||||||||||    
T  31474935 gaccaaattgattgatttacagaaaattgc 31474906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 690
Target Start/End: Complemental strand, 37646346 - 37646293
Alignment:
Q  637 aaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 690  Q
    |||||| |||||||  |||||||||||||  ||||||||||||||||| |||||    
T  37646346 aaaattatcaaggacaaaattgattgatttacagaaaattgcaaaattcccaac 37646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 26238726 - 26238987
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||||| | ||||||||||||||||||||||||| |||||||||||||||||     
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 26238825  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcat-g 581  Q
    |||||||||||| ||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||| |    
T  26238826 catcaaatcagtccctccgttaagttagtctgttaacggaggtgatgtgtactgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcatgg 26238925  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  26238926 accaaattgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattg 26238987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 381 - 678
Target Start/End: Original strand, 41823888 - 41824186
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatg 480  Q
    ||||||||||||| |||||||| ||||||||||||||||||| |  | ||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  41823888 tagactaataccttaaattcgtccttgaattttcaaaaatcagctaatttcgtccttgaattttgcgaaatatctatttagtcctcgaatttacaaaatg 41823987  T
Q  481 ttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca- 579  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||| ||||  |||||||||||||| |||||||||||||| | | || |||| ||     
T  41823988 ttcatcaaatcagtccctccgttaagttggtctattaacggaggtgacttgtacagttaacctcttacatggcttaccacgtcagaagccacgcaaacag 41824087  T
Q  580 tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
     ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||  ||||| |||||||||||||  |||||| |||||    
T  41824088 ggaccaaattgattgatttacataaaattgccaaggatcaaattgattgattttcagaaaagtgcaaaggaccaaattgattgatattcagaatattgc 41824186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 383 - 647
Target Start/End: Complemental strand, 42943515 - 42943250
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||   |||||||||||||||     
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 42943416  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||  |    
T  42943415 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcaggg 42943316  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||    
T  42943315 accaaattgattgatttacagaaaattgccaaggaccaaattgatggatttttagaaaattgtcaa 42943250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 380 - 643
Target Start/End: Complemental strand, 22273983 - 22273719
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    |||||||||||||||||||| || |||||||||| |||||||  || |||| |||  | |||||||| ||||||||||||||||   |||||||||||||    
T  22273983 atagactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatttacaaaat 22273884  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||  ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||  ||||||    
T  22273883 gtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacacaagca 22273784  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
      |||||||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||    
T  22273783 gggaccaaattgattgatttacagaaaattgccaaggaccaaattgatggatttttagaaaattg 22273719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 383 - 642
Target Start/End: Complemental strand, 5038150 - 5037893
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||| ||| |||||||||||||| ||||||||||   |||||||||||||||     
T  5038150 gactaatacctcaaattcgt-cttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatttacaaaatgtc 5038052  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcat-g 581  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || ||||  || |    
T  5038051 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctcttacaaggcttaccacgtcagatgccacgcaa--atgg 5037954  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 642  Q
    ||||||||||||||||||||||||||||| ||||| ||  || || |||||||||||||||    
T  5037953 accaaattgattgatttacagaaaattgctaaggaccagcttgatggattttcagaaaatt 5037893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 468 - 701
Target Start/End: Original strand, 3152042 - 3152276
Alignment:
Q  468 aatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatat 567  Q
    ||||||||||||||  ||||||| ||| |||| ||||||||||| ||||||  || ||||| |||| |||||||||||||||||| ||||||||||| ||    
T  3152042 aatttacaaaatgtcaatcaaattagtccctctgttaagttggtatgttaatagatgtgacatgtaatgttaacctcttacaaggtttaccacgtcagat 3152141  T
Q  568 gtcatgcaagcatg-accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatta 666  Q
    |||| ||||||| | |||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||| ||||||| ||||||||||||||     
T  3152142 gtcacgcaagcagggaccaaattgattgatttacagaaaattgccaatgactaaattgattgattttcagaaaattatcaaggaccaaattgattgattt 3152241  T
Q  667 tcagaaaattgcaaaatttccaacgactctttctc 701  Q
    |||||||||||||||||| ||||||||||||||||    
T  3152242 tcagaaaattgcaaaattcccaacgactctttctc 3152276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 27692926 - 27692631
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||| ||||||| | ||||||   |||||||||||||||     
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtc 27692827  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     || |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||| | ||| || |||||||  |    
T  27692826 aattaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtaagatgccacgcaagcaggg 27692727  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  27692726 accaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatagattttcagaaaattg 27692631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 380 - 677
Target Start/End: Complemental strand, 29239279 - 29238981
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    ||||||||||||||||||||||| |||||||||| |||||||  || | ||||||| |||||||| ||||||||| | ||||||   |||||||||||||    
T  29239279 atagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtccctgaatttacaaaat 29239180  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
     |  ||||||| ||| |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||    
T  29239179 atcaatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgtcacgcaagca 29239080  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
      ||||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  29239079 gggaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 29238981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 43262226 - 43261967
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||| ||||||||||||||| |  |||||| || ||||||||||||||||||||||||||| |||||||||||||||||     
T  43262226 gactaatacctcaaattcgtccttaaattttcaaaaatcagctaaattcgaccctaaattttgcgaaatatctatttagtcctcgaatttacaaaatgtc 43262127  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||||||||  ||||||||||||||||||||||||  |||||| | ||  ||||||||||||||| ||||||||||||  |||||| |||||||  |    
T  43262126 aatcaaatcagtctctccgttaagttggtctgttaacg--ggtgacatctaccgttaacctcttacaaagcttaccacgtctgatgtcacgcaagcaggg 43262029  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||| |||||||||  ||| || |||||| ||||||||| | |||||||    
T  43262028 accaaattgattgattttcagaaaattttcaaagaccaaattgattgattttaaaaaaattg 43261967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 33761069 - 33761364
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| |||||||| || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  33761069 gactaatacctcaaattcgtctttgaattttgaaaaatcagccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 33761168  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || ||||| |  |    
T  33761169 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtaggg 33761268  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33761269 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33761364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 386 - 643
Target Start/End: Complemental strand, 13284081 - 13283823
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||| ||||||||| |||||||||| |||||||  || | || |||| | |||||||||||||||| | ||||||   |||||||||||||||  ||    
T  13284081 taataccacaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccatgaatttacaaaatgtcaat 13283982  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||| ||||||| |||||| |||||||  ||||    
T  13283981 caaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttatcacgtcagatgtcacgcaagcagggacc 13283882  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||| ||||||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  13283881 aaactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 13283823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 38548920 - 38548659
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||| ||   ||||||||||||| |     
T  38548920 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatttacaaaatttc 38548821  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  38548820 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 38548721  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| ||||||  |||||| |||||| || ||||||||||||||||    
T  38548720 accaaactgattgatttacacaaaattttcaaggaccaaattgatggattttcagaaaattg 38548659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 35510908 - 35510613
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | | ||||||||| ||||||| |||||||| | ||||||   |||||||||||||||     
T  35510908 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccttgaattttgtgaaatatcaaattagtccctgaatttacaaaatgtc 35510809  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||| |   |||||||||| |||| ||||| ||||||| |||||| |||||||  |    
T  35510808 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtatcacgttaacctctgacaaagcttaacacgtcagatgtcacgcaagcaggg 35510709  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  35510708 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35510613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 382 - 677
Target Start/End: Complemental strand, 601794 - 601498
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||    
T  601794 agactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgt 601695  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||| ||| ||||||||||||||||||||||||||||||||||| |   |||||||||| |||| ||||||||||||| ||  || |||||||      
T  601694 caatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtttcacgttaacctctgacaaagcttaccacgtcaaataccacgcaagcagg 601595  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||| |||||||||||||||||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  601594 gaccaaactgattgatttacagaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 601498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 8608237 - 8608499
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtcctt-aaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||| |||||||| |||||||||| |||||||   | | ||||||| | ||||||||||||||||| | ||||||   ||||||| |||||||    
T  8608237 gactaataccttaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaaattttgcgaaatatcaaattagtccctgaatttataaaatgt 8608336  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||  | |||||||      
T  8608337 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgcaacgcaagcagg 8608436  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||| ||||||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  8608437 gaccaaactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 8608499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 13106804 - 13107065
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||| |||||||| |||||||||| |||||||  || | ||| ||| | |||||||||||||||| | ||||||   ||||||| ||||| |     
T  13106804 gactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttataaaatttc 13106903  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  13106904 aatcaaattagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 13107003  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  13107004 accaaactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 13107065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 384 - 643
Target Start/End: Original strand, 33707207 - 33707467
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttc 483  Q
    ||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   ||||||| |||||||      
T  33707207 actaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttataaaatgtca 33707306  T
Q  484 atcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tga 582  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| |||||| |||||||  ||    
T  33707307 atcaaatcagtcactccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgtcaagcaagcaggga 33707406  T
Q  583 ccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||| ||||||||||||| ||||||  |||||| |||||| || |||||||| |||||||    
T  33707407 ccaaactgattgatttacacaaaattttcaaggaccaaattgatggattttcataaaattg 33707467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 29237151 - 29237446
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  29237151 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 29237250  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc-atg 581  Q
     ||||||| ||| ||||| |||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||| | |    
T  29237251 aatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaagg 29237350  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||  ||||||||| |||| |||||||||||    
T  29237351 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaagggtcaaattgatggattttcagaaaattg 29237446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 33762802 - 33762511
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  33762802 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatgtc 33762703  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||| | |||||||||||||||||||||||||||||||||||||   ||||||||    ||| ||||||||||||| |||||| |||||||  |    
T  33762702 aatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacct----caaagcttaccacgtcagatgtcacgcaagcaggg 33762607  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||| ||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  33762606 accaaactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33762511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 41040720 - 41040982
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||| ||  ||||||||| |||||||  |  |||||||   | |||||| | ||||| |||||| ||| | |||||||||||||||     
T  41040720 gactaatacctcaaatttgtctttgaatttttaaaaatcggctaaattcgtttctgaattttccaaaatagctattttgtccttgaatttacaaaatgtc 41040819  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||||| || |||||||||||||||||||||||| |||||||||||||  ||| |||||||||||| |||||||||||| |||||| |||||||  |    
T  41040820 aatcaaatcggtccctccgttaagttggtctgttaacagaggtgacgtgtaacgttgacctcttacaagacttaccacgtcagatgtcacgcaagcaggg 41040919  T
Q  582 accaaattgattga-tttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||| |||| ||||||||| |||||| |||||| || ||||||||||||||||    
T  41040920 accaaattgattgattttagagaaaattgtcaaggagcaaattgatggattttcagaaaattg 41040982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 35509214 - 35509509
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||| || |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  35509214 gactaatacctcaaattagtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35509313  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| | ||||||||||||  ||||||||| |||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  35509314 aatcaaatcagtccatccgttaagttgacctgttaacgaaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 35509413  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  35509414 accaaactgattgatttacaaaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35509509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 382 - 609
Target Start/End: Original strand, 13484544 - 13484771
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    |||||||| ||||||||||||  |||||||||||||||||  || ||||||||| | |||||||||||||   ||||| ||| | |||||||||||||||    
T  13484544 agactaatgcctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaattgttattttgtccttgaatttacaaaatgt 13484643  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| ||||| |||||||||||| |||||| |||||||||| |  |||||||| |||||||||||||||||||| ||| ||  ||||||      
T  13484644 caatcaaatcagtccctccattaagttggtctattaacgaaggtgacgtg-aacgttaaccttttacaaggcttaccacgtcagatgccacacaagcagg 13484742  T
Q  581 gaccaaattgattgatttacagaaaattg 609  Q
    |||||||||||| ||||| ||||||||||    
T  13484743 gaccaaattgatggattttcagaaaattg 13484771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 383 - 676
Target Start/End: Complemental strand, 15308350 - 15308056
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||| | ||||||||| | ||||||   |||||||||||||||     
T  15308350 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtc 15308251  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||  |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  15308250 aatcaaattagcccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 15308151  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    |||||||||||||||||| | ||||||   |||||  ||||  || |||||  | ||||||  |||||| ||||||||| |||| ||||||||||    
T  15308150 accaaattgattgatttatacaaaattttgaaggacgaaatcgatggatttaaacaaaatttccaaggaccaaattgatggattttcagaaaatt 15308056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 383 - 676
Target Start/End: Complemental strand, 15488719 - 15488425
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||| | ||||||||| | ||||||   |||||||||||||||     
T  15488719 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaattagtccctgaatttacaaaatgtc 15488620  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||  |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  15488619 aatcaaattagcccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 15488520  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    |||||||||||||||||| | ||||||   |||||  ||||  || |||||  | ||||||  |||||| ||||||||| |||| ||||||||||    
T  15488519 accaaattgattgatttatacaaaattttgaaggacgaaatcgatggatttaaacaaaatttccaaggaccaaattgatggattttcagaaaatt 15488425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 386 - 676
Target Start/End: Original strand, 27404213 - 27404504
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||||||||| | || |||||||||| |||||||  || | ||||||| | |||| | ||||||||| |  |||||    |||||| |||||||  ||    
T  27404213 taatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtccctaaatttataaaatgtcaat 27404312  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||| ||| ||| |||||||||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| |||||| |||||||  ||||    
T  27404313 caaattagtcccttcgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgtcacgcaagcagggacc 27404412  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    ||| ||||||||||||| |||||| | || ||  ||||| ||  |||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  27404413 aaactgattgatttacacaaaatttcgaatgactaaattgatgaatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 27404504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 427 - 581
Target Start/End: Original strand, 17807063 - 17807217
Alignment:
Q  427 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 526  Q
    |||||||||| ||||||||| |||||| |||||||||  ||||||||||||| ||  |||||| |||  ||||| ||||||||| |||||||||||||||    
T  17807063 aattcgtcctcaaattttgcaaaatatttatttagtccccgaatttacaaaacgtcaatcaaaccagaccctccattaagttggcctgttaacggaggtg 17807162  T
Q  527 acgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg 581  Q
    || |||| ||||||||||||||||||||||| | |||| |||||| | |||||||    
T  17807163 acatgtactgttaacctcttacaaggcttacgatgtcagatgtcacgtaagcatg 17807217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 405 - 540
Target Start/End: Original strand, 15562446 - 15562580
Alignment:
Q  405 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtta 504  Q
    ||||||||| ||||||||  | |||||||||||||||||||  ||||||| |||||||   |||||||| |||||||  ||||||||||| |||||||||    
T  15562446 ttgaatttttaaaaatcagtcaaattcgtccttaaattttgtaaaatatcaatttagttc-cgaatttataaaatgtcaatcaaatcagtccctccgtta 15562544  T
Q  505 agttggtctgttaacggaggtgacgtgtattgttaa 540  Q
    |||||||||||||||||||||||| |||| ||||||    
T  15562545 agttggtctgttaacggaggtgacatgtactgttaa 15562580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 618 - 703
Target Start/End: Original strand, 26238928 - 26239013
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaacgactctttctcct 703  Q
    |||||| |||||||| |||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26238928 caaattgattgatttacagaaaattgccaaggaccaaattgattgattttcagaaaattgcaaaatttccaacgactctttctcct 26239013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 584 - 703
Target Start/End: Original strand, 41824126 - 41824245
Alignment:
Q  584 caaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaat 683  Q
    ||||||||||||||| ||||||| ||| ||||| |||||| |||||| ||||||| |||| ||| || |||||||||||||| |||||||||||||||||    
T  41824126 caaattgattgattttcagaaaagtgcaaaggaccaaattgattgatattcagaatattgccaatgatcaaattgattgattttcagaaaattgcaaaat 41824225  T
Q  684 ttccaacgactctttctcct 703  Q
    | || ||| |||||||||||    
T  41824226 taccgacggctctttctcct 41824245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 26242455 - 26242378
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||    
T  26242455 taatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtc 26242378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 398 - 579
Target Start/End: Complemental strand, 29694391 - 29694210
Alignment:
Q  398 ttcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacc 497  Q
    ||||| ||| ||||||||||||| | |  ||||| || |||| |||||| |||||||||||||||  |  |||||  ||||| |  ||||||||||| ||    
T  29694391 ttcgtccttaaattttcaaaaataagctaaattcatctttaatttttgcaaaatatctatttagttcttaaatttttaaaatatcaatcaaatcagttcc 29694292  T
Q  498 tccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    || |||||||| | |||||||||||||||| ||||| | |||||| ||||||||| ||||||||||||||| || |||||||    
T  29694291 tctgttaagttagcctgttaacggaggtgatgtgtactattaaccgcttacaaggtttaccacgtcatatgccacgcaagca 29694210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 41825785 - 41825708
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| ||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  41825785 taatacctcaaattcgtccttgaattttcaaaaatcaaataaattcgtccttgaattttgcgaaatatctatttagtc 41825708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 8609931 - 8609851
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||||||||||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  8609931 gactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 8609851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 386 - 502
Target Start/End: Original strand, 9671980 - 9672096
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||||| |||||||| ||||||||||||  |||||| | ||||||||| | |||||||||||||||||||||||||  |||||||||||||| |  ||    
T  9671980 taataccttaaattcgtccttgaattttcaccaatcaatcaaattcgtccatgaattttgcgaaatatctatttagtccccgaatttacaaaatttcaat 9672079  T
Q  486 caaatcagtacctccgt 502  Q
    |||||| || |||||||    
T  9672080 caaatcggttcctccgt 9672096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 34681155 - 34681075
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| ||||||||||||||||||  || ||||||||| | |||||||||||||||||||||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 34681075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 463
Target Start/End: Original strand, 13282477 - 13282558
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  13282477 agactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 13282558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 7745258 - 7745176
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||| |||||||||||  |||||||||||||||||| || ||||||||  | ||||||||||||||| |||||||||    
T  7745258 tagactaatatctcaaattcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtc 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 463
Target Start/End: Original strand, 42941777 - 42941854
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| |||||||||| |||||||| || ||||||||| | ||||||| ||||||| |||||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtc 42941854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 581 - 643
Target Start/End: Original strand, 41824157 - 41824219
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||| | ||||| |||||||| ||||||||| |||||||||||||||||||    
T  41824157 gaccaaattgattgatattcagaatattgccaatgatcaaattgattgattttcagaaaattg 41824219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 384 - 472
Target Start/End: Original strand, 5036446 - 5036534
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    ||||||||||||||||||| ||| |||||| |||||||   | ||||||||| | ||||||| ||||||||||||||||| | ||||||    
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattt 5036534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 27691154 - 27691234
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtc 27691234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 600754 - 600819
Alignment:
Q  377 ttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaatt 442  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||| || | ||||||||| ||||    
T  600754 ttaatggactaatacctcaaattcgtccttgaattttgaaaaatcagccaatttcgtccttgaatt 600819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 38547228 - 38547308
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||| ||||| |||||||||| |||||||  || ||| ||||| | |||||||||||||||| | ||||||    
T  38547228 gactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtc 38547308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 9795535 - 9795582
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattc 431  Q
    |||||||||||||||||||| || |||||||||||||||||| |||||    
T  9795535 actaatacctcaaattcgtttttaaattttcaaaaatcaaccaaattc 9795582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 22272334 - 22272416
Alignment:
Q  383 gactaatacctcaaattcgttcttgaatttt--caaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||||||  |||||||||   ||||||||  | ||||||||| | ||||||||| |||||||||||||||    
T  22272334 gactaatacctcaaattcgtctttgaattttaaaaaaaatcagtcaaattcgtccctgaattttgcgtaatatctatttagtc 22272416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 618 - 681
Target Start/End: Original strand, 41824092 - 41824155
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaa 681  Q
    |||||| |||||||| || ||||||| |||||| |||||||||||||| |||||||| ||||||    
T  41824092 caaattgattgatttacataaaattgccaaggatcaaattgattgattttcagaaaagtgcaaa 41824155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 41040922 - 41040983
Alignment:
Q  618 caaattaattgattttc-agaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||||  |||||||||||||||| ||||||||| |||| ||||||||||||    
T  41040922 caaattgattgattttagagaaaattgtcaaggagcaaattgatggattttcagaaaattgc 41040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 13108480 - 13108400
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||| ||||||||||| |||||||||| |||||||  |  ||| ||||| | |||||||||||||||| | ||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtc 13108400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 41042728 - 41042648
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||| |||| ||| |||||||||| ||||||   || |||| |||| | ||||||| |||||||||||||||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtc 41042648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 43262026 - 43261966
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||||||||||||| |||| || |||||||||||||| | | ||||||||    
T  43262026 caaattgattgattttcagaaaattttcaaagaccaaattgattgattttaaaaaaattgc 43261966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 581 - 610
Target Start/End: Original strand, 15562646 - 15562675
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgc 610  Q
    ||||||||||||||||||||||||||||||    
T  15562646 gaccaaattgattgatttacagaaaattgc 15562675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 1e-98; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 382 - 703
Target Start/End: Original strand, 52641887 - 52642209
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||||||||||||| ||||||||||||||||||| || ||||||||| | ||||||||||||||| ||||||||| || ||||||||||||||    
T  52641887 agactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagtcctcaaatttacaaaatgt 52641986  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||| ||||  |||||| ||||||||  |||||||||||| ||| ||  ||||||      
T  52641987 tcatcaaatcagtccctccgttaagttggtatattaacggaggtgacatgtaccgttaacttcttacaaaacttaccacgtcagatgccacacaagcagg 52642086  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaa 680  Q
    |||||||||||||||||| ||||||||| | || || |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  52642087 gaccaaattgattgattttcagaaaatttctaatgaccaaattgattgattttcagaaaattgccaaggaacagattgattgattttcagaaaattgcaa 52642186  T
Q  681 aatttccaacgactctttctcct 703  Q
    |||||||||| || |||||||||    
T  52642187 aatttccaacaacactttctcct 52642209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 37346051 - 37345756
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| ||||||| ||| | ||| ||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 37345952  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  37345951 aatcaaatcagtccctccgttaagttggtctattaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 37345852  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||| ||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  37345851 accaaactgattgacttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 37345756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 382 - 643
Target Start/End: Complemental strand, 2871166 - 2870904
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||| ||||||||||| |||||||||| |||||||  |  ||||||||| | |||||||||||||| |||||| ||| | |||||||||||||||    
T  2871166 agactaatatctcaaattcgtccttgaatttttaaaaatcggctaaattcgtccctgaattttgcgaaatagctattttgtctttgaatttacaaaatgt 2871067  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| |||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||| ||  ||||||      
T  2871066 caatcaaatcagtccctccgttaagttgctctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagg 2870967  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||| ||||||||||||||||| |||||| || |||||||| |||||||    
T  2870966 gaccaaattgattgatttgcagaaaattgccaaggaccaaattgatggattttcataaaattg 2870904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 383 - 642
Target Start/End: Original strand, 31236819 - 31237079
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | |||| |||| | ||||||||||||||||||||||||    ||||||||||||| |     
T  31236819 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaatttacaaaatatc 31236918  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||| ||  || |||||||  |    
T  31236919 aatcaaatcagtccctccgttaagttggtctgttaatggaggtgacgtgtaacgttaaccgcttacaaggcttaccacgtcagataccacgcaagcagag 31237018  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 642  Q
    |||||||||||||||||||| ||||||| |||||| ||||||||| |||||||||||||||    
T  31237019 accaaattgattgatttacataaaattgtcaaggaccaaattaatggattttcagaaaatt 31237079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 386 - 643
Target Start/End: Original strand, 3011858 - 3012116
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||||||||||||| ||| |||||| ||||||||  | ||||||| | | |||||||||||||||||||||||||   |||||||||||||||  ||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatttacaaaatgtcaat 3011957  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| | |||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||| ||||||| ||  || |||||||  ||||    
T  3011958 caaatcagtccatccgttaagttggtctattaacggagatgacgtgtaacgttaacctcttacaaggcttatcacgtcagataccacgcaagcagagacc 3012057  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||||||||| ||||| |||||| || ||||||||||||||||    
T  3012058 aaattgattgatttacagaaaattgctaaggaccaaattgatggattttcagaaaattg 3012116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 384 - 647
Target Start/End: Original strand, 50554164 - 50554428
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttc 483  Q
    ||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||  ||||| |||||||||    |||||| ||||||||      
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatttgcaaaatgtca 50554263  T
Q  484 atcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tga 582  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||||||| |||||||||||  |  ||    
T  50554264 atcaaatcagtcccttcgttaagttggtctgttaacgggggtgacgtgtaacgttaacctcttacatggcttaccacgtcaaatgtcatgcaataaggga 50554363  T
Q  583 ccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||||||||    
T  50554364 ccaaattgattgatttacacaaaattgccaaggaccaaattgatggattttcagaaaattgtcaa 50554428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 381 - 677
Target Start/End: Original strand, 8167940 - 8168236
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatg 480  Q
    |||||||||||||||||||||| |||||||||| |||||||  || | ||||||  | |||||||||||||||| | ||||||   |||| |||||||||    
T  8167940 tagactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtctctgaattttgcgaaatatcaaattagtccctgaatgtacaaaatg 8168039  T
Q  481 ttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcat 580  Q
    |  ||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || ||||| |     
T  8168040 tcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtag 8168139  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  8168140 gaccaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 8168236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 383 - 665
Target Start/End: Original strand, 25276742 - 25277025
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||| ||||| |||||||||||||||| | ||||||   |||||||||||||||     
T  25276742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 25276841  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| ||| || ||||| |  |    
T  25276842 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaacctctgacaaagcttaccacgtcagatgccacgcaagtaggg 25276941  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 665  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| ||||    
T  25276942 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggatt 25277025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 26223587 - 26223882
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  26223587 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 26223686  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| ||||| ||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  26223687 aatcaaattagtccctccattaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 26223786  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||| | |||||| ||||||| |||||| || ||||| || |||||| |||| || ||||||||| |||| |||||||||||    
T  26223787 accaaactgattgatttaaacaaaatttccaaggaccaaattgatggatttacacaaaattttcaacgaccaaattgatggattttcagaaaattg 26223882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 386 - 643
Target Start/End: Original strand, 51894570 - 51894828
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||| ||||||||||||||||||||| ||||||    | |||| |||  | ||||||||||||||| |||||||||   |||||||||||||||  ||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaatttacaaaatgtcaat 51894669  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||| ||| ||| || || ||||  ||||    
T  51894670 caaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaatgttaaactcttacaagacttaccacatcagatgccacgccagcagggacc 51894769  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||||||||||| ||| || |||||| || ||||||||||||||||    
T  51894770 aaattgattgatttacagaaaattgtcaacgaccaaattgatggattttcagaaaattg 51894828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 378 - 677
Target Start/End: Complemental strand, 27089373 - 27089073
Alignment:
Q  378 taatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaa 477  Q
    |||| |||||||||||||||||||| |||||||||| |||||||  |  | ||||||||| ||||||| |||||||| | ||| ||   |||||||||||    
T  27089373 taattgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccttgaattttgtgaaatatcaaattaatccctgaatttacaaa 27089274  T
Q  478 atgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaag 577  Q
    ||||  ||||||||||| | |||||||||||||| |||||||||||||||||||||  |||||||||| |||| ||||||||||| | ||| || |||||    
T  27089273 atgtcaatcaaatcagtccttccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgttagatgccacgcaag 27089174  T
Q  578 catg-accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    || | |||||| ||||||||||||| |||||| |||| || |||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||||||    
T  27089173 caggaaccaaactgattgatttacacaaaatttccaatgaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 27089074  T
Q  677 g 677  Q
    |    
T  27089073 g 27089073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 8169657 - 8169362
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||| | ||||||| | ||||||   |||||||||||||||     
T  8169657 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacaaaatatcaaattagtccctgaatttacaaaatgtc 8169558  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||| | |||||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| |||||| |||||||  |    
T  8169557 aatcaaatcaatccctccgttaagttggtctgttaacggaggtgacgtgtcacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcaggg 8169458  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||| ||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  8169457 accaaactgattgattcacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 8169362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 394 - 643
Target Start/End: Original strand, 33599229 - 33599479
Alignment:
Q  394 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 493  Q
    ||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||| | ||| ||   |||||||||||||||  ||||||||||    
T  33599229 caaattcgtccttgaattttgaaaaatcggtcaaattcgtccatgaattttgcgaaatatcaaattaatctctgaatttacaaaatgtcaatcaaatcag 33599328  T
Q  494 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgat 592  Q
    | ||||| ||||||||||||||||||||||||||||||||   ||||||||||||||  |||||||||||||||| || |||||||  ||||||| ||||    
T  33599329 tccctccattaagttggtctgttaacggaggtgacgtgtaactttaacctcttacaaaacttaccacgtcatatgccacgcaagcagggaccaaactgat 33599428  T
Q  593 tgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  33599429 tgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 33599479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 382 - 643
Target Start/End: Original strand, 46582009 - 46582271
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    |||||||||||||||||| || |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||    
T  46582009 agactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgt 46582108  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||      
T  46582109 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 46582208  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||| |||| |||||||| ||||||  |||| | |||||| || |||||||| |||||||    
T  46582209 gaccaaaatgatagatttacacaaaattttcaagaaccaaattgatggattttcataaaattg 46582271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 34776569 - 34776830
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   ||||||||||||| |     
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatttacaaaatttc 34776668  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||| |||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||| ||||||| |||  | |||||||  |    
T  34776669 aatcagatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaacacgtcagatgaaacgcaagcaggg 34776768  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  34776769 accaaactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 34776830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 383 - 647
Target Start/End: Complemental strand, 37088225 - 37087960
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||| | |||||||||| |||||||  || ||||||| | | |||||||||||||| |||||| ||| |  ||||||||||||||     
T  37088225 gactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattttgtccttaaatttacaaaatgtc 37088126  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||| ||||||||| | |||||||||  |||||||||||||||| ||||||| |||| ||| ||  |||| |  |    
T  37088125 aatcaaatcagtccctccgttaagttggtttgttaacggtgatgacgtgtaaagttaacctcttacaagacttaccaagtcagatgccacacaagtaggg 37088026  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    |||||||||||||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||    
T  37088025 accaaattgattgatttagagaaaattgtcaagggccaaattgattgatttttagaaaattgtcaa 37087960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 4854410 - 4854671
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||| |||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||| ||| | ||||||   ||||||||||||| |     
T  4854410 gactaatacttcaaattcgtccttgaattttgaaaaatcgttcaatttcgtccctgaattttgcgaaagatcaaattagtccctgaatttacaaaatttc 4854509  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||||||||  ||||||||||||||||||||||||||||||| |||||  |||||||||| |||| ||||||||||||||||| || |||||||  |    
T  4854510 aatcaaatcagtcactccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctctgacaaagcttaccacgtcatatgccacgcaagcaggg 4854609  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| ||  |||||||||||||||    
T  4854610 accaaactgattgatttacacaaaatttccaaggaccaaattgatgtattttcagaaaattg 4854671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 467 - 642
Target Start/End: Original strand, 45045004 - 45045180
Alignment:
Q  467 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 566  Q
    |||||||||||||||  ||||||| |||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |    
T  45045004 gaatttacaaaatgtcaatcaaattagtctctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgtcaga 45045103  T
Q  567 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 642  Q
    || || |||||||  |||||||||||||||||||||||||||||||||| | |||||| || |||||||||||||||    
T  45045104 tgccacgcaagcagggaccaaattgattgatttacagaaaattgccaagaaccaaattgatggattttcagaaaatt 45045180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 47011456 - 47011750
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||| ||     
T  47011456 gactaatacctcaaaatagtccttgaattttgaaaaatcggacaatttcgtccatgaatttttcgaaatatcaaattagtccctgaatttacaaaaagtc 47011555  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||| ||||| |||||||||| |||| |||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  47011556 aatcaactcagtccctccgttaatttggcctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 47011655  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  47011656 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggatcaaattgatggattttcagaaaattg 47011750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 382 - 677
Target Start/End: Complemental strand, 1444271 - 1443976
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    |||||||||||||||| | || ||| |||||| |||||||  || | || |||| | |||||| | ||||||| | ||||||   |||||||||||||||    
T  1444271 agactaatacctcaaaatagtccttaaattttgaaaaatcggccaattttgtccctgaatttttcaaaatatcaaattagtccctgaatttacaaaatgt 1444172  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||      
T  1444171 caatcaaattagtccctccgttaatttggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagg 1444072  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||| ||||||||||||| ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  1444071 gaccaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 1443976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 9120039 - 9120333
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  9120039 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 9120138  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| |||||| |||||||| ||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  9120139 aatcaaattagtccctccgttaatttggtccgttaacgggggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcaggg 9120238  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  9120239 accaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 9120333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 474 - 643
Target Start/End: Original strand, 6816928 - 6817106
Alignment:
Q  474 caaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatg 573  Q
    ||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||||||| ||| || |    
T  6816928 caaaatgtcaatcaaatcagtccctccattaagttggtctgttaacggaggtgacatgtaacgttaacctcttacaagggttaccacgtcagatgccacg 6817027  T
Q  574 caagc-atgaccaaattgattgatttacagaaa--------attgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||| | | |||||||||||| ||||| ||||||         |||||||||| |||||| || ||||||||||||||||    
T  6817028 caaacaaggaccaaattgatagattttcagaaattaccaacgttgccaaggaccaaattgatggattttcagaaaattg 6817106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 25279077 - 25278997
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||| | |||||||||||||||||||||||||||    
T  25279077 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtc 25278997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 429 - 564
Target Start/End: Original strand, 23577682 - 23577817
Alignment:
Q  429 ttcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgac 528  Q
    |||| |||| |||||||||||||||| | |||||||  |||||| ||||||||  | ||||||||| | |||||||| |||| |||||||||||||||||    
T  23577682 ttcgaccttcaattttgcgaaatatcaaattagtcaatgaatttgcaaaatgtcaaccaaatcagtccgtccgttaaattggcctgttaacggaggtgac 23577781  T
Q  529 gtgtattgttaacctcttacaaggcttaccacgtca 564  Q
    ||||   |||||||||| |||| |||||||||||||    
T  23577782 gtgtcacgttaacctctgacaaagcttaccacgtca 23577817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 375 - 465
Target Start/End: Original strand, 25278846 - 25278936
Alignment:
Q  375 ttttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcat 465  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||  | |||| |||| | |||||||||||||||||||||||||||    
T  25278846 ttttaattgactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtcat 25278936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 382 - 463
Target Start/End: Original strand, 2869578 - 2869659
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||||||| ||||||||||||||||||   | ||||||||| | |||||||||||||||||||||||||    
T  2869578 agactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtc 2869659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 3013600 - 3013520
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| ||| ||||  | ||||||||| | |||||||||||||||||||||||||    
T  3013600 gactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtc 3013520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 394 - 555
Target Start/End: Original strand, 3369441 - 3369602
Alignment:
Q  394 caaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcag 493  Q
    |||| |||| ||||||||| |||  | || || |||||||||| ||||||| | |||| |||||||  ||   |||||||| | ||||  |||||||  |    
T  3369441 caaaatcgtccttgaatttgcaaggaccagccaaattcgtcctcaaatttttcaaaatgtctatttcatctatgaatttaccacatgtcaatcaaattcg 3369540  T
Q  494 tacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggctt 555  Q
    |  |||||||||||||| ||||||||||||||||| ||||||||| |||||| |||||||||    
T  3369541 tcactccgttaagttggcctgttaacggaggtgacatgtattgtttacctctcacaaggctt 3369602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 25278492 - 25278403
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||| |||||||||| | ||||||    
T  25278492 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattt 25278403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 37344342 - 37344431
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||| |||||||||| | ||||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattt 37344431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 31238619 - 31238539
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| || |||||||||| |||||||  || |||| |||| | |||||||||||||||||||||||||    
T  31238619 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtc 31238539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 34778264 - 34778182
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||||| |||||||||| |||||||  || ||| ||||| | |||||||||||||||| | ||||||    
T  34778264 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtc 34778182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 50556223 - 50556141
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||| |||||||||||  ||||||||| ||||||||  | ||||||||  | |||||||||||||||||||||||||    
T  50556223 tagactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtc 50556141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 4856090 - 4856010
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||| ||||| | |||||||||||||||| | ||||||    
T  4856090 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtc 4856010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 585 - 677
Target Start/End: Original strand, 25276979 - 25277071
Alignment:
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||||| |||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  25276979 aaattgatggatttacacaaaatttccaaggaccaaattgatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattg 25277071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 27087283 - 27087363
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| ||| |||||| |||||||   | |||| |||| | |||||||||||||||||||||||||    
T  27087283 gactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtc 27087363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 643
Target Start/End: Original strand, 25277009 - 25277071
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||| |||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  25277009 gaccaaattgatggatttacataaaatttccaaggaccaaattgatggattttcagaaaattg 25277071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 52643736 - 52643659
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| ||| |||||| ||||||||    ||||||||| | ||||||||||||||| |||||||||    
T  52643736 taatacctcaaattcgtccttaaatttttaaaaatcagttaaattcgtccctgaattttgcgaaatatttatttagtc 52643659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 6818802 - 6818722
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || || |||||| |  |||| || ||||||||||||||||    
T  6818802 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtc 6818722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 51894769 - 51894829
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| |||||||||||||| || ||||||||| |||| ||||||||||||    
T  51894769 caaattgattgatttacagaaaattgtcaacgaccaaattgatggattttcagaaaattgc 51894829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 51896276 - 51896196
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||| ||||||||||| ||| ||| |||||| ||||||||  | |||| |||| | |||||||||||||||||||||||||    
T  51896276 gactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtc 51896196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 33599186 - 33599249
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttg 445  Q
    ||||||||||||||||||||| |||||||||| |||||||   | ||||||||||| |||||||    
T  33599186 agactaatacctcaaattcgtccttgaattttgaaaaatcgggcaaattcgtccttgaattttg 33599249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 9121794 - 9121712
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| | || |||||||||| |||||||  || | ||||||| |||||||| ||||||||| | ||||||    
T  9121794 tagactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctaaatttttcgaaatatcaaattagtc 9121712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 676
Target Start/End: Complemental strand, 20945010 - 20944885
Alignment:
Q  552 gcttaccacgtcatatgtcatgcaagcatg-accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaagga 650  Q
    ||||||||||||| ||| || ||||||| | | |||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||| |    
T  20945010 gcttaccacgtcagatgccacgcaagcagggatcaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaagaa 20944911  T
Q  651 acaaattgattgattatcagaaaatt 676  Q
     ||||||||| |||| ||||||||||    
T  20944910 ccaaattgatggattttcagaaaatt 20944885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 3012057 - 3012117
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||| |||| ||||||||||||    
T  3012057 caaattgattgatttacagaaaattgctaaggaccaaattgatggattttcagaaaattgc 3012117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 46583680 - 46583600
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||   | | || |||| | |||||||||||||||| | ||||||    
T  46583680 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtc 46583600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 451
Target Start/End: Original strand, 6816866 - 6816933
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaat 451  Q
    ||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||| ||||    
T  6816866 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaat 6816933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 677
Target Start/End: Complemental strand, 37088023 - 37087964
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||  |||||||||||||||  |||||||||||||| | |||||||||    
T  37088023 caaattgattgatttagagaaaattgtcaagggccaaattgattgatttttagaaaattg 37087964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 677
Target Start/End: Original strand, 50554365 - 50554424
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| |||||||||||    
T  50554365 caaattgattgatttacacaaaattgccaaggaccaaattgatggattttcagaaaattg 50554424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 618 - 676
Target Start/End: Original strand, 31237021 - 31237079
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    |||||| |||||||| || |||||||||||||| |||||| || |||| ||||||||||    
T  31237021 caaattgattgatttacataaaattgtcaaggaccaaattaatggattttcagaaaatt 31237079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 33602765 - 33602688
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| |||||||||| |||||||   | | ||||||| | ||||||| |||||||| | ||||||    
T  33602765 taatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgtgaaatatcaaattagtc 33602688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 420
Target Start/End: Original strand, 45044949 - 45044986
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaat 420  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  45044949 gactaatacctcaaattcgtccttgaattttaaaaaat 45044986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 173; Significance: 1e-92; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 380 - 655
Target Start/End: Original strand, 47384291 - 47384567
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    ||||||||||||||||||||||| |||||||||| |||||| | || ||||||||||| |||||||||||||||||| ||||||  ||||||||||||||    
T  47384291 atagactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatttacaaaat 47384390  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||  ||||||||||| |||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||| |||||||    
T  47384391 gtcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacatgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagca 47384490  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaa 655  Q
     |||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||||||| |||||| ||||    
T  47384491 gtgaccaaattgattgatttacataaaattgtcaaggaccaaattgattgattttcagaaaattgccaaggaccaaa 47384567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 375 - 643
Target Start/End: Original strand, 24226573 - 24226842
Alignment:
Q  375 ttttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttac 474  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||  || ||||||||||| |||||||||||||| |||||| ||| | ||||||||    
T  24226573 ttttaatatactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattttgtccttgaatttac 24226672  T
Q  475 aaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgc 574  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||| || |||  |    
T  24226673 aaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttgacctcttacaaggcttaccacgtcagatatcacac 24226772  T
Q  575 aagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||  ||||||||||||||||||| ||||||||| |||||| |||||| || ||||||||||||||||    
T  24226773 aagcagggaccaaattgattgatttagagaaaattgtcaaggaccaaattgatggattttcagaaaattg 24226842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 13169772 - 13169511
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| ||||||||||||||||||  || |||| |||| | |||||||||||||||||||||||||   |||||||||||||||     
T  13169772 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 13169673  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||| | |||||| |||||||  |    
T  13169672 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgttagatgtcacgcaagcaggg 13169573  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||| ||||||||||| || ||||||  | ||||||||||||||||    
T  13169572 accaaattgattgatttacataaaattgccaatgaccaaattggtggattttcagaaaattg 13169511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 382 - 643
Target Start/End: Original strand, 37113940 - 37114202
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||||||||||||| |||||||||| ||||||    | ||||| ||| | |||||||||||||||||||||||||    ||||||||||||||    
T  37113940 agactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatttacaaaatgt 37114039  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| ||| || |||||||      
T  37114040 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctcttacaaggcttaccacgtcagatgccacgcaagcagg 37114139  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  37114140 gaccaaattgattgatttacagaaaattgccaatgatcaaattgatggattttcagaaaattg 37114202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 386 - 643
Target Start/End: Original strand, 39857648 - 39857906
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||   |||||||||||||||  ||    
T  39857648 taatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatttacaaaatgtcaat 39857747  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||| |||||| |||| ||  ||||    
T  39857748 caaatcagtccctccgttaagttggtctgttaaccgaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaaacagggacc 39857847  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  39857848 aaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 39857906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 387 - 643
Target Start/End: Original strand, 35691431 - 35691688
Alignment:
Q  387 aatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatc 486  Q
    |||||||||||||||| ||||||||||||||||||   | ||||||||  |||||||||||||||| |||||| ||| | |||||||||||||||  |||    
T  35691431 aatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtctctaaattttgcgaaatagctattttgtccttgaatttacaaaatgtcaatc 35691530  T
Q  487 aaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacca 585  Q
    |||||||| ||| |  ||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||| |||||| |||||||  |||||    
T  35691531 aaatcagtcccttcactaaattggtctgttaacggaggtggcgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcagggacca 35691630  T
Q  586 aattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  35691631 aattgattgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattg 35691688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 381 - 564
Target Start/End: Original strand, 46437105 - 46437288
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatg 480  Q
    |||||||||||||||||||||| ||||||||||||||||||| || |||||||| || |||||||||||||| |||||| ||| | ||||||||||||||    
T  46437105 tagactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtcgttgaattttgcgaaatagctattttgtccttgaatttacaaaatg 46437204  T
Q  481 ttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 564  Q
    |  | ||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||    
T  46437205 tcaaccaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttaccacgtca 46437288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 386 - 643
Target Start/End: Complemental strand, 6605483 - 6605225
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||||||||||| || |||||||||| |||||||   | |||| || | | |||||||||||||| ||||||||||   ||||||||||||||   ||    
T  6605483 taatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaatttacaaaatgccaat 6605384  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| ||| ||  ||||||  |||     
T  6605383 caaatcagtccctccattaagttggtctgttaacggatgtgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgccacacaagcagggact 6605284  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||    
T  6605283 aaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 6605225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 35403708 - 35403413
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  35403708 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 35403609  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||| ||||| ||||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  35403608 aatcaaatcagtccctccgttaaattggtatgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 35403509  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||| |||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  35403508 accaaactgattggtttacacaaaatttcgaaggacgaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 35403413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 381 - 643
Target Start/End: Original strand, 34774996 - 34775259
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatg 480  Q
    |||||||||| |||||||||||  ||||||||| |||||||   | ||||| | | | |||||||| ||||| ||||||||||   |||||||||||||     
T  34774996 tagactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatttacaaaata 34775095  T
Q  481 ttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca- 579  Q
    |  ||||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||||||||| ||| || |||||||     
T  34775096 tcaatcaaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcag 34775195  T
Q  580 tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
     ||||||||||||||||||||||||||||| ||||||  ||||| || |||||||| |||||||    
T  34775196 ggaccaaattgattgatttacagaaaattgtcaaggactaaattgatggattttcataaaattg 34775259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 376 - 677
Target Start/End: Original strand, 35401962 - 35402264
Alignment:
Q  376 tttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttaca 475  Q
    ||||| ||||||||| ||||||||||| |||||||||| |||||||  |  | ||||||| | |||||||||||||||| | ||||||   |||||||||    
T  35401962 tttaaaagactaatatctcaaattcgtccttgaattttgaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttaca 35402061  T
Q  476 aaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgca 575  Q
    ||||||  ||||||||||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| ||||| ||||||| ||| |||| |    
T  35402062 aaatgtcaatcaaatcagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcttatcacgtcagatgccatgta 35402161  T
Q  576 agca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaa 674  Q
    ||||  ||||||| ||||| ||||||| |||||| | |||||  ||||| || ||||| || |||||| |||||||  |||||||| |||| ||||||||    
T  35402162 agcagggaccaaactgattaatttacacaaaatttcgaaggacgaaattgatggatttacacaaaattttcaaggactaaattgatggattttcagaaaa 35402261  T
Q  675 ttg 677  Q
    |||    
T  35402262 ttg 35402264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 386 - 609
Target Start/End: Complemental strand, 48228027 - 48227803
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||||||||||||||  ||||||||| |||||||   | |||||||| || ||||||||||||||||||||| |||   |||||||||||||||  ||    
T  48228027 taatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtctttgaattttgcgaaatatctattttgtccctgaatttacaaaatgtcaat 48227928  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||| || |||||||  ||||    
T  48227927 caaatcagtccctccattaagttggtgtgttaacggaggtgacgtgtaacgttaacctcttacaatgcttaccacgtcagatgccacgcaagcagggacc 48227828  T
Q  585 aaattgattgatttacagaaaattg 609  Q
    ||||||||  |||| ||||||||||    
T  48227827 aaattgatgaattttcagaaaattg 48227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 467 - 677
Target Start/End: Original strand, 29994961 - 29995172
Alignment:
Q  467 gaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcata 566  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||   ||||||||| |||| |||| ||||||||||    
T  29994961 gaatttacaaaatgtcaatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacattaacctctgacaaagctttccacgtcata 29995060  T
Q  567 tgtcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgatt 665  Q
    || || |||||||  ||||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| ||||    
T  29995061 tgccacgcaagcagggaccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggatt 29995160  T
Q  666 atcagaaaattg 677  Q
     |||||||||||    
T  29995161 ttcagaaaattg 29995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 383 - 550
Target Start/End: Original strand, 38549547 - 38549714
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||| |||||||| ||||||||||||||||||| || | ||||||| | ||||||| |||||||||||||| || |||||||||||||||||     
T  38549547 gactaataccttaaattcgtccttgaattttcaaaaatcagccaagttcgtccctgaattttgtgaaatatctatttaatcctcgaatttacaaaatgtc 38549646  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaa 550  Q
    |||||||||||| ||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  38549647 catcaaatcagtcccttcgttaagttggtctgttaacgaaggtgacgtgtaccgttaacctcttacaa 38549714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 22155936 - 22155686
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||| || ||||| ||||||||||||||||||  || ||||||||| | |||||||| ||||| |||||| |||   |||||||||||||||     
T  22155936 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22155837  T
Q  483 catcaaatcagtacctccg-ttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg 581  Q
     ||||||||||| |||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||        || ||| |   |    
T  22155836 aatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacg--------caagcagg---g 22155748  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  22155747 accaaattaattgatttacagaaaattgccaaggaccaaatttatggattttcagaaaattg 22155686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 22211851 - 22211601
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||| || ||||| ||||||||||||||||||  || ||||||||| | |||||||| ||||| |||||| |||   |||||||||||||||     
T  22211851 gactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatttacaaaatgtc 22211752  T
Q  483 catcaaatcagtacctccg-ttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg 581  Q
     ||||||||||| |||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||        || ||| |   |    
T  22211751 aatcaaatcagtccctccgtttaagttgctctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacg--------caagcagg---g 22211663  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  22211662 accaaattaattgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattg 22211601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 374 - 677
Target Start/End: Complemental strand, 20479817 - 20479514
Alignment:
Q  374 attttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattta 473  Q
    |||||||  ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||    
T  20479817 attttaaatgactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaattta 20479718  T
Q  474 caaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatg 573  Q
    ||||||||  ||||||| ||| |||||||||| |||||| |||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |    
T  20479717 caaaatgtcaatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacg 20479618  T
Q  574 caagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaa 672  Q
    ||||||  ||||||| ||||||||||||| ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| ||||||    
T  20479617 caagcagggaccaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaa 20479519  T
Q  673 aattg 677  Q
    |||||    
T  20479518 aattg 20479514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 383 - 613
Target Start/End: Complemental strand, 45361365 - 45361134
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||| | |||||||||| ||||||    | | || || | | |||||||| |||||  ||||||||| | ||| |||||||||||     
T  45361365 gactaatacctcaaattcttccttgaattttaaaaaatgggtcaattttgttcctgaattttgcaaaatagttatttagtccttgaacttacaaaatgtc 45361266  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||| |||||| |||||||  |    
T  45361265 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacatggcttaccacgtcagatgtcacgcaagcaggg 45361166  T
Q  582 accaaattgattgatttacagaaaattgccaa 613  Q
    |||||||||||  |||| || |||||||||||    
T  45361165 accaaattgatgtattttcataaaattgccaa 45361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 386 - 643
Target Start/End: Original strand, 37791657 - 37791915
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||||| || |||||  || |||||| |||||||| || ||||| |||  ||||||||| ||||||||||||||||    |||||  |||||||  ||    
T  37791657 taatacctaaacttcgtctttaaattttaaaaaatcagccaaattcatccccaaattttgccaaatatctatttagtccctaaatttttaaaatgtcaat 37791756  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||| | | ||| |||||||||  |||||||||||||||||||||  ||||||| ||||||||||||||||||||| ||| |||||| |||  ||||    
T  37791757 caaatcaatccatccattaagttggcatgttaacggaggtgacgtgtaccgttaaccacttacaaggcttaccacgtcagatgccatgcaggcagggacc 37791856  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||||||| |||||||||||| | ||| || |||||||| ||||||||||    
T  37791857 aaattgattgatttacaaaaaattgccaagaaccaacttgattgatttacagaaaattg 37791915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 386 - 600
Target Start/End: Original strand, 27664433 - 27664648
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    |||||||||||||| || |||||||||| |||||||  || | || |||| | |||||||| ||||||| | ||||||   |||||||||||||||  ||    
T  27664433 taatacctcaaattagtccttgaattttgaaaaatcggccaattttgtccctgaattttgcaaaatatcaaattagtccctgaatttacaaaatgtcaat 27664532  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||    
T  27664533 caaatcagtccctccgttaagttggtatgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggacc 27664632  T
Q  585 aaattgattgatttac 600  Q
    ||| ||||| ||||||    
T  27664633 aaactgattaatttac 27664648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 501 - 643
Target Start/End: Original strand, 38472378 - 38472521
Alignment:
Q  501 gttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattgattta 599  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||| ||| || |||| ||  |||||||||||||||||||    
T  38472378 gttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaggcttgccacgtcaaatgccacgcaaacagagaccaaattgattgattta 38472477  T
Q  600 cagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||| |||||| |||||| || ||||||||||||||||    
T  38472478 cagaaaattgtcaaggaccaaattgatggattttcagaaaattg 38472521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 383 - 623
Target Start/End: Complemental strand, 78103 - 77862
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| |||||||  || | ||||||| | |||||||| ||||||| | || |||   ||||||||||||||      
T  78103 gactaatacctcaaattcgtctttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaatttgtccctgaatttacaaaatgcc 78004  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||||||||||| ||||| || ||||  ||||||||   |||| |||||||| |||| || |||||||||||  |    
T  78003 aatcaaatcagtccctccgttaagttggtctgttaacagaggttacatgtaacgttaaccttcgacaaagcttaccatgtcagatttcatgcaagcaggg 77904  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaatt 623  Q
    |||||| ||||||||||||| |||||| ||||||| ||||||    
T  77903 accaaactgattgatttacacaaaatttccaaggaccaaatt 77862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 383 - 647
Target Start/End: Original strand, 23904583 - 23904861
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||  | |||||||| ||||| ||||||||||   |||||||||||||||     
T  23904583 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtctctgaattttgcaaaatagctatttagtccatgaatttacaaaatgtc 23904682  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggc--------------ttaccacgtcatatg 568  Q
     ||||||||||| ||||| ||||||| ||| ||||| | ||||||||||||  ||||||||||||||||||              ||||||||||| |||    
T  23904683 aatcaaatcagtccctccattaagttagtccgttaaggaaggtgacgtgtaacgttaacctcttacaaggctcctcttacaaggtttaccacgtcagatg 23904782  T
Q  569 tcatgcaagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||| |||||||  ||||||||||||||||||| ||||||||  |||||| |||||| ||  |||||||||||||||||||    
T  23904783 tcacgcaagcagggaccaaattgattgatttatagaaaatt-tcaaggaccaaattgatgaattttcagaaaattgtcaa 23904861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 392 - 578
Target Start/End: Complemental strand, 13039722 - 13039536
Alignment:
Q  392 ctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatc 491  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||| |||||||||||||||| ||||||||||   |||||| ||||||||  ||||||||    
T  13039722 ctcaagttcgtccttgaattttcaaaaatcaatcaaattcgtccctaaattttgcgaaataactatttagtccctgaattttcaaaatgtcaatcaaatc 13039623  T
Q  492 agtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc 578  Q
    ||| | |  |||||||||| |||||||| |||||||||| ||  ||||||| |||||||| |||||||||| | |||||| ||||||    
T  13039622 agtccatatgttaagttggcctgttaacagaggtgacgtttaccgttaaccgcttacaagacttaccacgttagatgtcacgcaagc 13039536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 591 - 703
Target Start/End: Original strand, 38549714 - 38549826
Alignment:
Q  591 attgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 690  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||| |||| |||||| |||||||||||||| | |||||||||||||||| ||||     
T  38549714 attgatttacagaaaattgccaagaaccaaattcattgattttcagaatattgccaaggaccaaattgattgatttttagaaaattgcaaaattcccaat 38549813  T
Q  691 gactctttctcct 703  Q
    | || ||||||||    
T  38549814 ggctttttctcct 38549826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 37796302 - 37796225
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||| || ||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||    
T  37796302 taatacctcaaatttgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgcgaaatatctatttagtc 37796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 472
Target Start/End: Complemental strand, 39859355 - 39859264
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||||||||||||||||||||| |||||||||| |||||||  || |||| |||| | ||||||||||||||||||||||||| | ||||||    
T  39859355 tagactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattt 39859264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 47386333 - 47386253
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| ||| |||||| ||||||||  | ||||||||||| ||||||||||||||| |||||||||    
T  47386333 gactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtc 47386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 24228530 - 24228453
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||| |||||||||||||||| ||||||   || ||||||||| | |||||||||||||||||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtc 24228453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 564
Target Start/End: Complemental strand, 48311801 - 48311641
Alignment:
Q  404 cttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgtt 503  Q
    |||||||||| ||||||||  | ||||| ||||||||||||||||||| |||| ||  ||   ||||||| ||||||   |||||||  || | ||||||    
T  48311801 cttgaattttaaaaaatcagtcaaattcatccttaaattttgcgaaatgtctaattcatccctgaatttataaaatggcaatcaaatttgtccgtccgtt 48311702  T
Q  504 aagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtca 564  Q
    |||||||  ||||||  |||||||| |||| | ||||||||||| ||| ||||||||||||    
T  48311701 aagttgggttgttaagagaggtgacatgtacttttaacctcttataagacttaccacgtca 48311641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 581 - 643
Target Start/End: Original strand, 46437834 - 46437896
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||| ||||||||| ||||| |||||| || ||||||||||||||||    
T  46437834 gaccaaattgattgatttactgaaaattgcaaaggaccaaattgatggattttcagaaaattg 46437896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 38474267 - 38474178
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    ||||||||||||||||| || || ||||||| |||||||   | ||||||||| | ||||||||||||||||||||||||| | ||||||    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattt 38474178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 382 - 463
Target Start/End: Complemental strand, 46439623 - 46439542
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||| |||||||||||  ||||||||| ||||||| | | || | ||| ||||||||||||||||||||||||||||    
T  46439623 agactaatatctcaaattcgtcattgaatttttaaaaatcgatcaaacttgtctttaaattttgcgaaatatctatttagtc 46439542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 22211660 - 22211600
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    ||||||||||||||| |||||||||| |||||| ||||||||| |||| ||||||||||||    
T  22211660 caaattaattgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgc 22211600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 27666189 - 27666109
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||    
T  27666189 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtc 27666109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 30940549 - 30940469
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||| ||||| ||||||||||||| |||||||  || ||||||||  | |||||| ||||||||||||||||||    
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtc 30940469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 382 - 462
Target Start/End: Complemental strand, 37115651 - 37115571
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt 462  Q
    |||||||||||||||||||||  ||||||||| ||||||||  | ||||||| | | |||||||| |||||||||||||||    
T  37115651 agactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagt 37115571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 38472462 - 38472522
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  38472462 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 38472522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 47384496 - 47384556
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| || |||||||||||||| |||||||||||||| ||||||||||||    
T  47384496 caaattgattgatttacataaaattgtcaaggaccaaattgattgattttcagaaaattgc 47384556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 6605283 - 6605224
Alignment:
Q  619 aaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    ||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  6605283 aaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 6605224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 453
Target Start/End: Original strand, 13018036 - 13018103
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatat 453  Q
    ||||||||||||||| | |||||||||| |||||||| || |||||||||| |||||| |||||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaattcgtcctcaaatttagcgaaatat 13018103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 405 - 463
Target Start/End: Original strand, 13168142 - 13168200
Alignment:
Q  405 ttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||| |||||||  || ||||||||||| |||||||||||||||||||||||||    
T  13168142 ttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtc 13168200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 34777045 - 34776959
Alignment:
Q  377 ttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||| || ||||||||||||||||||||| |||||| ||||||   || ||||| | | | |||||||||||||||||||||||||    
T  34777045 ttaattgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtc 34776959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 582 - 643
Target Start/End: Original strand, 38549739 - 38549800
Alignment:
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||| |||||||| ||||| ||||||||||| |||||| ||||||||| |||||||||    
T  38549739 accaaattcattgattttcagaatattgccaaggaccaaattgattgatttttagaaaattg 38549800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 472
Target Start/End: Original strand, 45359336 - 45359425
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    ||||||||||| ||||| || | |||||||| |||||||   | ||| ||||||| ||||||||||||||||||||||||| | ||||||    
T  45359336 gactaataccttaaatttgtccatgaattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattt 45359425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 56330 - 56410
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  |  | ||||||| | |||||||||||||||| | ||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtc 56410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 22155745 - 22155685
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    ||||||||||||||| |||||||||| |||||| |||||| || |||| ||||||||||||    
T  22155745 caaattaattgatttacagaaaattgccaaggaccaaatttatggattttcagaaaattgc 22155685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 24226783 - 24226843
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| ||||||||  |||||||||||||||| ||||||||| |||| ||||||||||||    
T  24226783 caaattgattgatttagagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 24226843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 35691629 - 35691689
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| |||||||||| |||||| ||||||||| |||| ||||||||||||    
T  35691629 caaattgattgatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgc 35691689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 618 - 690
Target Start/End: Original strand, 37791856 - 37791928
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatttccaac 690  Q
    |||||| |||||||| || ||||||| |||| | ||| ||||||||||  |||||||||||||||||||||||    
T  37791856 caaattgattgatttacaaaaaattgccaagaaccaacttgattgatttacagaaaattgcaaaatttccaac 37791928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 23906356 - 23906295
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaatttt 444  Q
    |||||||||||||||||| | |||||||||| |||||||  || ||||||||| ||||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaattcgtccctaaatttt 23906295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 34775200 - 34775260
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| |||||||||||||||||  |||||||| |||| ||| ||||||||    
T  34775200 caaattgattgatttacagaaaattgtcaaggactaaattgatggattttcataaaattgc 34775260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 37114143 - 37114203
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| |||||||||| ||| || ||||||||| |||| ||||||||||||    
T  37114143 caaattgattgatttacagaaaattgccaatgatcaaattgatggattttcagaaaattgc 37114203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 39857847 - 39857907
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| ||||||||||||    
T  39857847 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgc 39857907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 454
Target Start/End: Complemental strand, 29996638 - 29996567
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatc 454  Q
    |||||||||||||||||||| |||||||||| |||||||   | | || |||| | ||||||||||||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatc 29996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 581 - 610
Target Start/End: Complemental strand, 13036387 - 13036358
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgc 610  Q
    ||||||||||||||||||||||||||||||    
T  13036387 gaccaaattgattgatttacagaaaattgc 13036358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 421
Target Start/End: Original strand, 29994907 - 29994944
Alignment:
Q  384 actaatacctcaaattcgttcttgaattttcaaaaatc 421  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  29994907 actaatacctcaaattcgtccttgaattttgaaaaatc 29994944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 7e-82; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 383 - 616
Target Start/End: Complemental strand, 8541360 - 8541126
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| |||||||  || ||||||||| | ||||||||||||||||||||||||| | |||||||||||||||     
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatttacaaaatgtc 8541261  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||||||  |    
T  8541260 aatcaaatcagtccctccgttaagttggtctgttaacggaggtgatgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcatgcaagcaggg 8541161  T
Q  582 accaaattgattgatttacagaaaattgccaagga 616  Q
    |||||||||||||||||||||||||||||||||||    
T  8541160 accaaattgattgatttacagaaaattgccaagga 8541126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 377 - 647
Target Start/End: Complemental strand, 28813862 - 28813589
Alignment:
Q  377 ttaatagactaatacctcaaattcgttcttgaattttcaaaaa--tcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttac 474  Q
    ||||| |||||||||||||||||||| |||||||||  |||||  |   || ||||||||||| |||||||||||||||||||||||||   ||||||||    
T  28813862 ttaattgactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatttac 28813763  T
Q  475 aaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgc 574  Q
    |||||||  ||||||||||| |||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||||||||||| | |||||| ||    
T  28813762 aaaatgtaaatcaaatcagtccctccgttaaattggtgtgttaacggaggtgacgtgtaacgttaacctcttacaaggcttaccacgttagatgtcacgc 28813663  T
Q  575 aagca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    |||||  |||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||||||||    
T  28813662 aagcagcgaccaaattgattgatttacagaaaattgccaaggaccaaattgatgaattttcagaaaattgtcaa 28813589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 12738825 - 12738564
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||||||| | | |||||||||||||||||||||||||   |||||||||||||||     
T  12738825 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12738726  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||||||||| ||| || |||||||  |    
T  12738725 aatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcaggg 12738626  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  12738625 accaaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 12738564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 12801648 - 12801387
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||||||| | | |||||||||||||||||||||||||   |||||||||||||||     
T  12801648 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatttacaaaatgtc 12801549  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||||||||| | |||||||||||| ||| || |||||||  |    
T  12801548 aatcaaatcagtccctccgttaagttggtttgttaacggaggtgacgtgtaacgttaacctcttacatgacttaccacgtcagatgccacgcaagcaggg 12801449  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||||    
T  12801448 accaaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattg 12801387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 30463900 - 30464161
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||   | ||||||||| | |||||||||||||||||||||||||   ||||||||||||| |     
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaatttacaaaatatc 30463999  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||||||| |||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||| |||||| |||||||  |    
T  30464000 aatcaaatcagtccctctgttaagttggtctgtttacggaggtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgtcacgcaagcaggg 30464099  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||||||||||| |||||| |||||| || ||||||||||||||||    
T  30464100 accaaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattg 30464161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 386 - 647
Target Start/End: Complemental strand, 28822176 - 28821915
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||||||||||||||| |||||||||| ||||||    | ||||||||| | |||||||||||||  |||||| ||| | |||||||||||||||  ||    
T  28822176 taatacctcaaattcgtccttgaatttttaaaaataggtcaaattcgtccctgaattttgcgaaattgctattttgtccttgaatttacaaaatgtcaat 28822077  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgacc 584  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||| |||| ||| || |||||||  ||||    
T  28822076 caaatcagtccctccgttaagttggtctgttaacggaagtgacgtgtaacgttaacctcttacaaggcttaccatgtcagatgccaagcaagcagggacc 28821977  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaa 647  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  28821976 aaattgattgatttacagaaaattgccaagg-tcaaattgatggattttcagaaaattgtcaa 28821915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 385 - 677
Target Start/End: Complemental strand, 17578022 - 17577729
Alignment:
Q  385 ctaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt-catcgaatttacaaaatgttc 483  Q
    |||||||||||||||||| |||||||||| |||||||  || | ||| ||| | |||||||| ||||||| | ||||| ||| |||||||||||||||      
T  17578022 ctaatacctcaaattcgtccttgaattttgaaaaatcggcccatttcttccctgaattttgcaaaatatcaaattagttcat-gaatttacaaaatgtca 17577924  T
Q  484 atcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tga 582  Q
    ||||||||||| |||||||||| ||||||||||||||||| |||||||||  |||||||||| |||| ||||||||||||| |||||| |||||||  ||    
T  17577923 atcaaatcagtccctccgttaaattggtctgttaacggagctgacgtgtaacgttaacctctaacaaagcttaccacgtcagatgtcacgcaagcaggga 17577824  T
Q  583 ccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||| ||||||||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| ||| |||||||    
T  17577823 ccaaactgattgatttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcataaaattg 17577729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 383 - 643
Target Start/End: Original strand, 32134231 - 32134497
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||| ||  ||||||||||||||||||||| |||||||| || |||||||  ||||||||||||||||   ||||||| |||||||     
T  32134231 gactaatacctcaaatttgtcattgaattttcaaaaatcaaccaaattcgtctttgaattttgtaaaatatctatttagtccctgaatttataaaatgtc 32134330  T
Q  483 catcaaatcagtacctccgtta-----agttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaag 577  Q
     |||||||||||   || ||||     |||||||||||||||||||||||||||||  ||||||||||||||| ||||| ||||||| ||| || |||||    
T  32134331 aatcaaatcagtctatctgttaagttaagttggtctgttaacggaggtgacgtgtaacgttaacctcttacaaagcttatcacgtcagatgccacgcaag 32134430  T
Q  578 ca-tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||  |||||||||||||||||||||||||||||||||||| |||||| ||  ||||||| |||||||    
T  32134431 cagggaccaaattgattgatttacagaaaattgccaaggaccaaattgatgaattttcataaaattg 32134497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 380 - 643
Target Start/End: Complemental strand, 34328919 - 34328651
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaat 479  Q
    ||||||||||||||||||||||| ||||||||||||||||||   | ||||||||| | |||||||| ||||| |||||| ||| | |||||||||||||    
T  34328919 atagactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattttgtccttgaatttacaaaat 34328820  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaag----gcttaccacgtcatatgtcatgca 575  Q
    ||  |||||||||||  ||||||||||||||||||||||||| |||||||||||  ||||||||||||||||    ||||||||||||| ||| || |||    
T  34328819 gtcaatcaaatcagtcgctccgttaagttggtctgttaacggtggtgacgtgtaacgttaacctcttacaaggctagcttaccacgtcagatgccacgca 34328720  T
Q  576 agca-tgaccaaattgattgatttacagaaaattgccaaggatc-aaattaattgattttcagaaaattg 643  Q
    ||||  ||||||||||||||||||| || |||||  |||||| | ||||| || ||||||||||||||||    
T  34328719 agcagggaccaaattgattgatttagag-aaattttcaaggaccaaaattgatggattttcagaaaattg 34328651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 383 - 643
Target Start/End: Complemental strand, 7269535 - 7269274
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||||||||  ||||||||| |||||||  |  | ||||||| | |||||||||||||||| | ||||||   ||||||| ||||||||    
T  7269535 gactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttataaaatgtt 7269436  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     |||||||||||   |||||||||||| |||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || ||||| |  |    
T  7269435 aatcaaatcagtcagtccgttaagttgatctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagtaggg 7269336  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||| ||||||||||||| |||||| ||||||| |||||| || ||||||||||||||||    
T  7269335 accaaactgattgatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 7269274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 381 - 677
Target Start/End: Complemental strand, 21843083 - 21842786
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatg 480  Q
    |||||||||||||||||||||| |||||||||| |||||||   | | || |||| | |||||||||||||||| | ||||||   ||||||||||||||    
T  21843083 tagactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatttacaaaatg 21842984  T
Q  481 ttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca- 579  Q
    |  ||||||||||| |||||||||||||  | | ||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||     
T  21842983 tcaatcaaatcagtccctccgttaagttttttttttaacggaggtgacgtgttacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcag 21842884  T
Q  580 tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
     ||||||| ||||||||||||| ||||||  ||| || |||||| || ||||| || |||||| ||||||| ||||||||| |||| | |||||||||    
T  21842883 ggaccaaactgattgatttacacaaaattttcaatgaccaaattgatggatttacacaaaattttcaaggaccaaattgatggatttttagaaaattg 21842786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 382 - 600
Target Start/End: Original strand, 2852885 - 2853104
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    ||||||||||||||||||||| |||||||||| |||||||   | | ||||||| | |||||||||||||||| | |||||    |||||||||||||||    
T  2852885 agactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatttacaaaatgt 2852984  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg 581  Q
      ||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||| ||| ||| || ||||||| |    
T  2852985 caatcaaatcagtccctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacttcagatgccacgcaagcagg 2853084  T
Q  582 -accaaattgattgatttac 600  Q
     |||||| ||||||||||||    
T  2853085 aaccaaactgattgatttac 2853104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 40782300 - 40782006
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  40782300 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 40782201  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| |||||| |||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  40782200 aatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcaggg 40782101  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  40782100 accaaactgattgatttacacaaaatttcgaaggacgaaattgatggatttacacaaaatt-ccaaggatcaaattgatggattttcagaaaattg 40782006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 383 - 677
Target Start/End: Original strand, 29620138 - 29620432
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  29620138 gactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtctctgaatttacaaaatgtc 29620237  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| |||||| |||||||||||||||||||   |||||||||| |||| ||||||||||||| ||| || |||||||  |    
T  29620238 aatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctctgacaaagcttaccacgtcagatgacacgcaagcaggg 29620337  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  29620338 accaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt-ccaaggaccaaattgatggattttcagaaaattg 29620432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 379 - 581
Target Start/End: Original strand, 41493840 - 41494042
Alignment:
Q  379 aatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaa 478  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||| || |||||||||| |||||||| |||||||||||||||||   |||| | |||||    
T  41493840 aatagagtaatacctcaacttcgtccttgaattttcaaaaatcagccaaattcgtcctcaaattttgtgaaatatctatttagtccatgaatattcaaaa 41493939  T
Q  479 tgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagc 578  Q
    |||  |||||||| || | ||||||||||||| |||||||||||| |||||||||  ||||||  ||||||||||| ||||| ||| ||||||  |||||    
T  41493940 tgtcaatcaaatccgtccatccgttaagttggcctgttaacggagatgacgtgtaccgttaactgcttacaaggctcaccacatcagatgtcacacaagc 41494039  T
Q  579 atg 581  Q
    |||    
T  41494040 atg 41494042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 381 - 642
Target Start/End: Original strand, 42471546 - 42471808
Alignment:
Q  381 tagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagt-catcgaatttacaaaat 479  Q
    ||||||||||||||||| | || |||||||||| |||||||  || | ||||||| | |||| | ||||||||| |  |||| ||| |||||||||||||    
T  42471546 tagactaatacctcaaaatagtccttgaattttgaaaaatcggccaatttcgtccctgaattattcgaaatatcaaaatagtacat-gaatttacaaaat 42471644  T
Q  480 gttcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca 579  Q
    ||  ||||||| ||| |||| ||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||    
T  42471645 gtcaatcaaattagtccctctgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcagatgccacgcaagca 42471744  T
Q  580 -tgaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaatt 642  Q
      ||| |||||||| |||||||| |||||| ||||||| |||||| || |||||||||||||||    
T  42471745 gggactaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaatt 42471808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 427 - 564
Target Start/End: Complemental strand, 27077512 - 27077375
Alignment:
Q  427 aattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcatcaaatcagtacctccgttaagttggtctgttaacggaggtg 526  Q
    |||||||||| ||||||| | ||||||||||||  ||   |||||||| ||||||  |||||||| || |||||||||||||||  |||||| |||||||    
T  27077512 aattcgtcctcaaatttttcaaaatatctattttatccctgaatttaccaaatgtcaatcaaatcggtccctccgttaagttggcatgttaatggaggtg 27077413  T
Q  527 acgtgtattgttaacctcttacaaggcttaccacgtca 564  Q
    ||||||| ||||||||||| ||||||||| ||| ||||    
T  27077412 acgtgtactgttaacctctcacaaggcttgccatgtca 27077375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 8539675 - 8539755
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| ||||||||| | ||||||| ||| |||||||||||||||||||||||||    
T  8539675 gactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtc 8539755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 383 - 461
Target Start/End: Complemental strand, 36057737 - 36057659
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttag 461  Q
    |||||||||||||||||||| ||||||||||||||||||  || ||||||||| | |||||||||||||||||||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttag 36057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 17574318 - 17574398
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||||||||| | |||||||||||||||||||||||||    
T  17574318 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtc 17574398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 383 - 463
Target Start/End: Original strand, 7267843 - 7267923
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||||| |||||||||| |||||||  || ||||||||  | |||||||||||||||||||||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtc 7267923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 34327632 - 34327715
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||||||||| ||||||||||| |||||   || ||||||||  | |||||||||||||||||||||||||    
T  34327632 atagactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtc 34327715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 581 - 643
Target Start/End: Complemental strand, 2181586 - 2181524
Alignment:
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    ||||||||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||    
T  2181586 gaccaaattgattaatttacagaaaattgccaaggaccaaattgatggattttcagaaaattg 2181524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 554 - 677
Target Start/End: Original strand, 24539933 - 24540057
Alignment:
Q  554 ttaccacgtcatatgtcatgcaagcatg-accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaac 652  Q
    ||||||||||| ||| || ||||||| | |||||| ||||||||||||| ||||||  |||||| |||||| || ||||| || ||||||  |||||| |    
T  24539933 ttaccacgtcagatgccacgcaagcagggaccaaactgattgatttacacaaaattttcaaggaccaaattgatggatttacacaaaatttccaaggacc 24540032  T
Q  653 aaattgattgattatcagaaaattg 677  Q
    |||||||| |||| |||||||||||    
T  24540033 aaattgatggattttcagaaaattg 24540057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 30464102 - 30464162
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  30464102 caaattgattgatttacagaaaattgtcaaggaccaaattgatggattttcagaaaattgc 30464162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 382 - 460
Target Start/End: Original strand, 2179786 - 2179864
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctattta 460  Q
    |||||||||||||||||| || |||||||||| |||||||   | ||||||||| | ||||||| ||||||||||||||    
T  2179786 agactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctattta 2179864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 43492212 - 43492142
Alignment:
Q  393 tcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||| ||| ||||||||||||||| || | ||| ||| | |||||||||||||||||||||||||    
T  43492212 tcaaattcgtacttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtc 43492142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 386 - 463
Target Start/End: Complemental strand, 18625129 - 18625052
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||| ||||||||||||   |||| |  ||||||||| | ||||||| |||||||||||||||||    
T  18625129 taatacctcaaattcgtccttgaattttcactgatcagctaaattcgtccctgaattttgtgaaatatctatttagtc 18625052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 463
Target Start/End: Complemental strand, 24541336 - 24541256
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||||||||||||||||||  ||||||||| |||||||  || | ||||||| | |||||||||||||||| | ||||||    
T  24541336 gactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtc 24541256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 30468404 - 30468315
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaattt 472  Q
    |||| ||||||||| ||||| |||||||||| ||||||    | ||||||||  | ||||||||||||||||||||||||| | ||||||    
T  30468404 gactgatacctcaatttcgtccttgaattttaaaaaattggtcaaattcgtctctcaattttgcgaaatatctatttagtccttgaattt 30468315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 2181583 - 2181523
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| ||| |||| |||||||||| |||||| ||||||||| |||| ||||||||||||    
T  2181583 caaattgattaatttacagaaaattgccaaggaccaaattgatggattttcagaaaattgc 2181523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 12738623 - 12738563
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| ||||||||||||    
T  12738623 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgc 12738563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 12801446 - 12801386
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| || ||||||| |||||| ||||||||| |||| ||||||||||||    
T  12801446 caaattgattgatttacataaaattgccaaggaccaaattgatggattttcagaaaattgc 12801386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 382 - 421
Target Start/End: Complemental strand, 2854451 - 2854412
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatc 421  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  2854451 agactaatacctcaaattcgtccttgaattttgaaaaatc 2854412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 552
Target Start/End: Complemental strand, 19998430 - 19998360
Alignment:
Q  484 atcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtat--tgttaacctcttacaagg 552  Q
    |||||||| || |||||||||||||||  |||| |||||||||| ||||||  ||||||||||| ||||||    
T  19998430 atcaaatcggtccctccgttaagttggcatgttgacggaggtgatgtgtatactgttaacctctcacaagg 19998360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 618 - 677
Target Start/End: Complemental strand, 28813652 - 28813593
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| |||||||| |||||||||| |||||| |||||||||  ||| |||||||||||    
T  28813652 caaattgattgatttacagaaaattgccaaggaccaaattgatgaattttcagaaaattg 28813593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 128; Significance: 9e-66; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 382 - 643
Target Start/End: Complemental strand, 1645 - 1385
Alignment:
Q  382 agactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgt 481  Q
    |||||||||| |||||||||| |||||||||| |||||||   | ||||||||| | |||||||  ||||| | ||||||||   |||||||||||||||    
T  1645 agactaatacatcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgaaaaatagcaatttagtccctgaatttacaaaatgt 1546  T
Q  482 tcatcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-t 580  Q
       |||||||||| |||||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||||||||| |||||| |||||||      
T  1545 cattcaaatcagtccctccgttaagttggtctgttaacgga--tgacgtgtaacgttaacctcttacaaggcttaccacgtcagatgtcacgcaagcaga 1448  T
Q  581 gaccaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattg 643  Q
    |||||||||||||||||||||||||||||||||||| |||||| || || |||||||||||||    
T  1447 gaccaaattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattg 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 678
Target Start/End: Complemental strand, 1444 - 1384
Alignment:
Q  618 caaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgc 678  Q
    |||||| |||||||| |||||||||| |||||| ||||||||| || | ||||||||||||    
T  1444 caaattgattgatttacagaaaattgccaaggaccaaattgatggaatttcagaaaattgc 1384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 386 - 701
Target Start/End: Original strand, 106673 - 106978
Alignment:
Q  386 taatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgttcat 485  Q
    ||||| ||||||||||| ||||||||| | ||  ||| || |||| |||| | |||||| |||||||||||||||||   ||||||||||||||||  ||    
T  106673 taatatctcaaattcgtccttgaatttaccaa--tcagccaaatttgtccatgaattttacgaaatatctatttagtttccgaatttacaaaatgtcaat 106770  T
Q  486 caaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagcatg-acc 584  Q
    ||||||||| |||||||||||||||||||||         ||||||||  ||| ||||||||||||||||||||||| | |||||| ||||||| | |||    
T  106771 caaatcagtccctccgttaagttggtctgtt---------gacgtgtaccgttgacctcttacaaggcttaccacgttagatgtcacgcaagcagggacc 106861  T
Q  585 aaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattgcaaaatt 684  Q
    ||||||||||||||||  ||||||| |||||| |||||| ||||||||||| ||||||| |||||| |||||||||||||| ||| |||||||  |||||    
T  106862 aaattgattgatttacgtaaaattgtcaaggaccaaattgattgattttcataaaattgccaaggaccaaattgattgattttcaaaaaattgtgaaatt 106961  T
Q  685 tccaacgactctttctc 701  Q
     ||| || |||||||||    
T  106962 cccagcggctctttctc 106978  T

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Target: scaffold1712 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold1712
Description:

Target: scaffold1712; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 383 - 676
Target Start/End: Original strand, 982 - 1276
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||  |  | ||||||| | |||| | ||||||||| |  |||||   |||||||||||||||     
T  982 gactaatacctcaaaatagtccttgaattttgaaaaatcggcaaatttcgtccctgaattattcgaaatatcaaaatagtccctgaatttacaaaatgtc 1081  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| ||||||||||||||||||||||||||   |||||||||| |||| || |||||||||| ||| || |||||||  |    
T  1082 aatcaaattagtccctccgttaaattggtctgttaacggaggtgacgtgtcacgttaacctctgacaaagcgtaccacgtcaaatgccacgcaagcaggg 1181  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaatt 676  Q
    ||||||||||| |||||||| |||||| | |||||  ||||| || ||||| || ||||||  |||||||||||||||| |||| ||||||||||    
T  1182 accaaattgatggatttacacaaaatttcgaaggactaaattgatggatttacacaaaatttccaaggaacaaattgatggattttcagaaaatt 1276  T

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Target: scaffold0058 (Bit Score: 91; Significance: 1e-43; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 496 - 677
Target Start/End: Complemental strand, 7213 - 7031
Alignment:
Q  496 cctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tgaccaaattgattg 594  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||| |||| ||||||||||||| ||| || |||||||  ||||||| ||||||    
T  7213 cctccgttaagttggtctgttaacggaggtgacgtgtaacgttaacctctgacaaagcttaccacgtcagatgccacgcaagcagggaccaaactgattg 7114  T
Q  595 atttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    ||||||| |||||| ||||||| |||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  7113 atttacacaaaatttccaaggaccaaattgatggatttacacaaaatttccaaggaccaaattgatggattttcagaaaattg 7031  T

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Target: scaffold0058; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 383 - 522
Target Start/End: Complemental strand, 14432 - 14293
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    |||||||||||||||||||| |||||||||| |||||||  |  | ||||||| | |||||||||||||||| | ||||||   |||||||||||||||     
T  14432 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatttacaaaatgtc 14333  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacgga 522  Q
     ||||||||||| |||||||||||||||||||||||||||    
T  14332 aatcaaatcagtccctccgttaagttggtctgttaacgga 14293  T

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Target: scaffold0058; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 3288 - 3374
Alignment:
Q  377 ttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||  || | || |||| | |||||||||||||||| | ||||||    
T  3288 ttaattgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtc 3374  T

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Target: scaffold0058; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 4460 - 4546
Alignment:
Q  377 ttaatagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    ||||| |||||||||||||||||||| |||||||||| |||||||  || | || |||| | |||||||||||||||| | ||||||    
T  4460 ttaattgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtc 4546  T

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Target: scaffold0081 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 383 - 677
Target Start/End: Complemental strand, 54347 - 54053
Alignment:
Q  383 gactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtcatcgaatttacaaaatgtt 482  Q
    ||||||||||||||| | || |||||||||| |||||||   | | ||||||| | |||||| ||||||||| | ||||||   |||||||||||||||     
T  54347 gactaatacctcaaaatagtccttgaattttgaaaaatcggtcaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatttacaaaatgtc 54248  T
Q  483 catcaaatcagtacctccgttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaagca-tg 581  Q
     ||||||| ||| |||||||||| |||||| |||||||||||||||||||   |||||||| | |||| ||||||||||||| ||| || |||||||  |    
T  54247 aatcaaattagtccctccgttaatttggtccgttaacggaggtgacgtgtcacgttaacctttgacaaagcttaccacgtcagatgacacgcaagcaggg 54148  T
Q  582 accaaattgattgatttacagaaaattgccaaggatcaaattaattgattttcagaaaattgtcaaggaacaaattgattgattatcagaaaattg 677  Q
    |||||| ||||||||||||| ||||||   |||||  ||||| || ||||| || ||||||  |||||| ||||||||| |||| |||||||||||    
T  54147 accaaactgattgatttacacaaaattttgaaggacgaaattgatggatttacacaaaatt-acaaggaccaaattgatggattttcagaaaattg 54053  T

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Target: scaffold0002 (Bit Score: 56; Significance: 8e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 380 - 459
Target Start/End: Original strand, 436262 - 436341
Alignment:
Q  380 atagactaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctattt 459  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| || ||||| ||| |||||||||||||||||||||||    
T  436262 atagagtaacacctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

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Target: scaffold0001 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 576
Target Start/End: Complemental strand, 63692 - 63617
Alignment:
Q  501 gttaagttggtctgttaacggaggtgacgtgtattgttaacctcttacaaggcttaccacgtcatatgtcatgcaa 576  Q
    |||||||||||| |||||| || ||||| || | |||||||||||||||||||||||||||||| |||||| ||||    
T  63692 gttaagttggtcagttaactgatgtgacatgcagtgttaacctcttacaaggcttaccacgtcagatgtcacgcaa 63617  T

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Target: scaffold0564 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 385 - 463
Target Start/End: Original strand, 8264 - 8342
Alignment:
Q  385 ctaatacctcaaattcgttcttgaattttcaaaaatcaaccgaattcgtccttaaattttgcgaaatatctatttagtc 463  Q
    |||||||||||||||||| |||||||||| ||||||   || ||||||| ||| |||||||| ||||||||||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtc 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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