View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1586_high_1 (Length: 876)

Name: NF1586_high_1
Description: NF1586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1586_high_1
NF1586_high_1
[»] chr8 (26 HSPs)
chr8 (476-678)||(28069636-28069838)
chr8 (483-678)||(30426625-30426820)
chr8 (483-680)||(36991280-36991477)
chr8 (483-670)||(41511186-41511373)
chr8 (483-678)||(40695204-40695398)
chr8 (476-678)||(10652573-10652776)
chr8 (487-675)||(44859128-44859314)
chr8 (484-678)||(10672470-10672662)
chr8 (483-608)||(24101940-24102065)
chr8 (488-607)||(28318929-28319048)
chr8 (484-678)||(45113195-45113390)
chr8 (483-585)||(12177613-12177715)
chr8 (483-585)||(12422041-12422143)
chr8 (484-599)||(8412179-8412294)
chr8 (481-602)||(27490038-27490159)
chr8 (476-544)||(5033023-5033091)
chr8 (617-678)||(5033310-5033371)
chr8 (493-678)||(37966400-37966583)
chr8 (510-600)||(36748525-36748611)
chr8 (556-601)||(26749581-26749626)
chr8 (556-604)||(1937185-1937233)
chr8 (484-604)||(34612498-34612609)
chr8 (509-543)||(21492733-21492767)
chr8 (481-543)||(24241507-24241569)
chr8 (478-536)||(44888554-44888612)
chr8 (567-604)||(17867690-17867727)
[»] chr5 (29 HSPs)
chr5 (476-678)||(18625377-18625579)
chr5 (476-681)||(35660562-35660767)
chr5 (483-678)||(32129573-32129768)
chr5 (483-678)||(13032043-13032237)
chr5 (483-678)||(37266655-37266850)
chr5 (481-678)||(39902337-39902534)
chr5 (476-675)||(11775709-11775909)
chr5 (483-670)||(4895699-4895886)
chr5 (476-678)||(14349721-14349922)
chr5 (483-678)||(40753118-40753313)
chr5 (484-608)||(4592726-4592849)
chr5 (483-678)||(34827118-34827311)
chr5 (483-662)||(8440943-8441122)
chr5 (483-586)||(1475686-1475789)
chr5 (481-679)||(3057338-3057535)
chr5 (503-676)||(43309062-43309225)
chr5 (481-608)||(3057180-3057307)
chr5 (481-600)||(10173870-10173985)
chr5 (510-602)||(28142807-28142901)
chr5 (567-685)||(29341003-29341120)
chr5 (509-673)||(32793324-32793487)
chr5 (481-534)||(4348120-4348173)
chr5 (552-604)||(3041338-3041390)
chr5 (504-595)||(14688519-14688610)
chr5 (482-544)||(23253716-23253778)
chr5 (484-604)||(36290537-36290647)
chr5 (552-597)||(2984427-2984472)
chr5 (493-538)||(10242766-10242811)
chr5 (567-604)||(40162737-40162774)
[»] chr2 (31 HSPs)
chr2 (476-675)||(13238598-13238797)
chr2 (483-680)||(35316749-35316946)
chr2 (476-679)||(28564808-28565012)
chr2 (492-678)||(23259443-23259629)
chr2 (477-585)||(39465693-39465801)
chr2 (475-573)||(41983401-41983498)
chr2 (481-564)||(2061299-2061382)
chr2 (481-573)||(374499-374591)
chr2 (497-585)||(45625111-45625199)
chr2 (617-680)||(45625033-45625096)
chr2 (617-680)||(11864927-11864990)
chr2 (483-580)||(10877626-10877724)
chr2 (481-584)||(12949392-12949494)
chr2 (484-599)||(8988791-8988895)
chr2 (567-678)||(2063361-2063472)
chr2 (487-541)||(42075456-42075510)
chr2 (488-604)||(374932-375038)
chr2 (484-604)||(29188588-29188698)
chr2 (14-163)||(10989590-10989735)
chr2 (515-670)||(4446860-4447015)
chr2 (515-601)||(30709065-30709152)
chr2 (323-469)||(10990015-10990161)
chr2 (475-600)||(23459880-23459995)
chr2 (637-675)||(32009934-32009972)
chr2 (481-678)||(19908702-19908897)
chr2 (620-672)||(40640731-40640783)
chr2 (475-513)||(673184-673222)
chr2 (546-608)||(21454520-21454582)
chr2 (488-538)||(39329930-39329980)
chr2 (567-604)||(13780506-13780543)
chr2 (567-604)||(40254180-40254217)
[»] chr7 (45 HSPs)
chr7 (479-678)||(4888387-4888586)
chr7 (476-678)||(9559010-9559211)
chr7 (487-678)||(21151080-21151271)
chr7 (270-475)||(21195479-21195684)
chr7 (483-678)||(16366442-16366637)
chr7 (488-678)||(7362497-7362686)
chr7 (485-677)||(45260384-45260576)
chr7 (483-678)||(18198180-18198375)
chr7 (269-467)||(21200724-21200923)
chr7 (9-230)||(21200347-21200562)
chr7 (9-229)||(21195101-21195315)
chr7 (483-678)||(44647889-44648083)
chr7 (483-678)||(12139252-12139446)
chr7 (483-675)||(47226035-47226224)
chr7 (483-635)||(25084727-25084879)
chr7 (484-678)||(33450431-33450626)
chr7 (484-678)||(47500238-47500433)
chr7 (713-860)||(21200974-21201117)
chr7 (481-608)||(29630970-29631097)
chr7 (713-852)||(21195723-21195858)
chr7 (484-679)||(34985900-34986095)
chr7 (481-602)||(32915881-32915999)
chr7 (534-678)||(39855770-39855913)
chr7 (14-185)||(24284872-24285037)
chr7 (301-468)||(24285267-24285434)
chr7 (552-670)||(989122-989239)
chr7 (504-590)||(40019626-40019712)
chr7 (35-108)||(24231770-24231843)
chr7 (511-591)||(30153225-30153305)
chr7 (484-602)||(19889066-19889174)
chr7 (484-602)||(32916104-32916212)
chr7 (488-601)||(47080360-47080470)
chr7 (503-600)||(30588489-30588576)
chr7 (515-608)||(46802357-46802448)
chr7 (617-675)||(47271107-47271164)
chr7 (556-601)||(47799933-47799978)
chr7 (483-543)||(6882149-6882209)
chr7 (552-598)||(11828945-11828991)
chr7 (567-605)||(19027713-19027751)
chr7 (567-605)||(20726885-20726923)
chr7 (567-604)||(4269187-4269224)
chr7 (481-538)||(8607963-8608020)
chr7 (567-604)||(14696788-14696825)
chr7 (567-604)||(30102501-30102538)
chr7 (481-534)||(33608977-33609030)
[»] chr1 (34 HSPs)
chr1 (477-678)||(50294019-50294220)
chr1 (474-678)||(50484301-50484505)
chr1 (475-678)||(48327110-48327313)
chr1 (476-679)||(12151684-12151887)
chr1 (483-608)||(12380936-12381061)
chr1 (483-608)||(12385003-12385128)
chr1 (476-680)||(40328193-40328396)
chr1 (484-678)||(23861908-23862106)
chr1 (472-585)||(45977935-45978048)
chr1 (487-581)||(7841763-7841857)
chr1 (475-680)||(18976258-18976461)
chr1 (509-608)||(24977190-24977289)
chr1 (481-602)||(46608409-46608525)
chr1 (481-582)||(2845187-2845289)
chr1 (481-597)||(5047418-5047533)
chr1 (617-678)||(12380833-12380894)
chr1 (617-678)||(12384900-12384961)
chr1 (618-678)||(45978064-45978124)
chr1 (515-666)||(39426166-39426317)
chr1 (574-678)||(7840635-7840739)
chr1 (481-555)||(1609617-1609691)
chr1 (504-602)||(32887812-32887910)
chr1 (484-597)||(23916013-23916124)
chr1 (487-565)||(40988643-40988721)
chr1 (503-607)||(44483712-44483815)
chr1 (484-561)||(6816294-6816370)
chr1 (481-591)||(19910469-19910583)
chr1 (556-604)||(52280069-52280117)
chr1 (510-597)||(7844939-7845026)
chr1 (504-606)||(24413310-24413402)
chr1 (484-543)||(30077725-30077784)
chr1 (503-573)||(42720819-42720888)
chr1 (567-604)||(6948862-6948899)
chr1 (517-574)||(45970804-45970861)
[»] chr6 (25 HSPs)
chr6 (483-678)||(4804372-4804567)
chr6 (475-677)||(1249105-1249305)
chr6 (483-678)||(7162008-7162203)
chr6 (475-675)||(27826454-27826654)
chr6 (483-678)||(21159325-21159516)
chr6 (499-678)||(17944102-17944281)
chr6 (504-678)||(12412582-12412756)
chr6 (483-608)||(29698087-29698212)
chr6 (534-679)||(13089704-13089849)
chr6 (483-585)||(32737798-32737900)
chr6 (484-675)||(227522-227714)
chr6 (509-680)||(30460770-30460944)
chr6 (515-671)||(2800574-2800730)
chr6 (567-670)||(7215816-7215919)
chr6 (617-678)||(32737915-32737976)
chr6 (510-555)||(17398773-17398818)
chr6 (509-585)||(1516238-1516314)
chr6 (509-585)||(1518327-1518403)
chr6 (556-604)||(24484876-24484924)
chr6 (552-597)||(2720366-2720411)
chr6 (492-543)||(28696731-28696782)
chr6 (621-679)||(1516162-1516219)
chr6 (621-679)||(1518251-1518308)
chr6 (567-604)||(7098226-7098263)
chr6 (509-602)||(17275921-17276014)
[»] chr4 (46 HSPs)
chr4 (475-678)||(19901874-19902077)
chr4 (476-678)||(24073534-24073735)
chr4 (483-678)||(18206996-18207191)
chr4 (483-678)||(56558203-56558398)
chr4 (476-678)||(23610559-23610761)
chr4 (484-677)||(34778346-34778539)
chr4 (483-679)||(33247085-33247279)
chr4 (495-678)||(3952126-3952309)
chr4 (483-678)||(5763118-5763313)
chr4 (484-678)||(5416422-5416617)
chr4 (481-678)||(38079676-38079873)
chr4 (483-679)||(39862441-39862637)
chr4 (483-602)||(12241440-12241559)
chr4 (487-680)||(33262506-33262699)
chr4 (483-680)||(12153095-12153275)
chr4 (483-608)||(47922101-47922226)
chr4 (526-666)||(30567868-30568008)
chr4 (538-679)||(12312430-12312572)
chr4 (483-571)||(52018707-52018795)
chr4 (484-608)||(31862246-31862370)
chr4 (483-577)||(17080697-17080791)
chr4 (487-565)||(12312572-12312650)
chr4 (484-673)||(47922327-47922517)
chr4 (518-671)||(1871237-1871388)
chr4 (481-608)||(25442200-25442328)
chr4 (618-678)||(33524321-33524381)
chr4 (473-604)||(56269106-56269228)
chr4 (618-678)||(52018822-52018882)
chr4 (484-604)||(5524382-5524492)
chr4 (484-604)||(37002281-37002391)
chr4 (510-678)||(23474062-23474229)
chr4 (504-584)||(33841854-33841934)
chr4 (491-576)||(43447638-43447723)
chr4 (481-601)||(3326438-3326559)
chr4 (556-604)||(48084555-48084603)
chr4 (475-543)||(56563892-56563960)
chr4 (484-531)||(22584951-22584998)
chr4 (481-532)||(23119486-23119537)
chr4 (481-543)||(4404222-4404284)
chr4 (484-538)||(16567388-16567442)
chr4 (567-604)||(25219003-25219040)
chr4 (567-604)||(32146510-32146547)
chr4 (567-604)||(46238974-46239011)
chr4 (642-671)||(49811509-49811538)
chr4 (567-604)||(53526096-53526133)
chr4 (567-604)||(55160401-55160438)
[»] scaffold0012 (1 HSPs)
scaffold0012 (483-678)||(207987-208182)
[»] chr3 (28 HSPs)
chr3 (483-678)||(43719903-43720098)
chr3 (499-678)||(27033591-27033770)
chr3 (476-678)||(19830387-19830591)
chr3 (483-678)||(2229907-2230102)
chr3 (483-676)||(40851697-40851891)
chr3 (483-678)||(34373755-34373950)
chr3 (488-608)||(34373611-34373731)
chr3 (488-675)||(46167322-46167509)
chr3 (484-680)||(48084744-48084941)
chr3 (481-608)||(550842-550969)
chr3 (487-654)||(12402893-12403061)
chr3 (575-679)||(24754673-24754777)
chr3 (575-679)||(24763670-24763774)
chr3 (508-597)||(566811-566899)
chr3 (484-608)||(40810382-40810505)
chr3 (481-581)||(52859433-52859534)
chr3 (626-678)||(24647905-24647957)
chr3 (475-604)||(42613006-42613125)
chr3 (484-604)||(31523698-31523808)
chr3 (481-543)||(3009171-3009233)
chr3 (482-544)||(20485808-20485870)
chr3 (481-543)||(49289042-49289104)
chr3 (503-556)||(32577476-32577528)
chr3 (484-600)||(49679304-49679410)
chr3 (481-580)||(2310233-2310330)
chr3 (481-588)||(29586259-29586365)
chr3 (484-543)||(41727030-41727089)
chr3 (481-547)||(778906-778972)
[»] scaffold0008 (1 HSPs)
scaffold0008 (478-678)||(9157-9354)
[»] scaffold0035 (1 HSPs)
scaffold0035 (483-678)||(16353-16548)
[»] scaffold0250 (1 HSPs)
scaffold0250 (483-679)||(7071-7271)
[»] scaffold0006 (2 HSPs)
scaffold0006 (487-585)||(73889-73987)
scaffold0006 (617-674)||(73817-73874)
[»] scaffold0126 (1 HSPs)
scaffold0126 (481-678)||(22399-22595)
[»] scaffold0456 (2 HSPs)
scaffold0456 (504-585)||(13641-13722)
scaffold0456 (617-678)||(13738-13799)
[»] scaffold0009 (1 HSPs)
scaffold0009 (510-673)||(6396-6559)
[»] scaffold0171 (1 HSPs)
scaffold0171 (484-601)||(17339-17446)
[»] scaffold0468 (1 HSPs)
scaffold0468 (483-581)||(5534-5632)
[»] scaffold0664 (1 HSPs)
scaffold0664 (567-604)||(4731-4768)


Alignment Details
Target: chr8 (Bit Score: 155; Significance: 8e-82; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 476 - 678
Target Start/End: Original strand, 28069636 - 28069838
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  28069636 gggtgaagatcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatgg 28069735  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  28069736 tgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 28069835  T
Q  676 ccc 678  Q
    |||    
T  28069836 ccc 28069838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 30426820 - 30426625
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  30426820 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 30426721  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||| ||| | |||||||||||| |||||||||||| |||||||||    
T  30426720 cacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttcaccc 30426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 483 - 680
Target Start/End: Original strand, 36991280 - 36991477
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||| | |||||||| ||||||||||||||||    
T  36991280 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatggtgggacc 36991379  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
    ||||||||||||||||||| ||||||        |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  36991380 cacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccgt 36991477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 483 - 670
Target Start/End: Original strand, 41511186 - 41511373
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||||||||| | |    
T  41511186 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaaac 41511285  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggat 670  Q
    ||||||||| |||||||||| |||||         ||||||||| ||||||||| ||| ||||||||||||||| ||| |||||||||    
T  41511286 cacttagtgataggacccactatctattttttatatctatctctttccaacttgcaaaactccatttattttgttaaacggagaggat 41511373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 40695398 - 40695204
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||| | |||||||| ||| || |||||||| |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||     
T  40695398 gatcctccctatttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggtggaact 40695299  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||| ||||||||        |||||||||||||||||||  ||| ||||||||||||||  ||||||||| |||||||||||    
T  40695298 cacttagtggtaggacctaccatctattttttgtgtctatctctctccaacttccaaa-ctccatttattttgctaaatggagaagatcttcaccc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 476 - 678
Target Start/End: Complemental strand, 10652776 - 10652573
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgat 573  Q
    |||| ||||||||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||| ||||| ||||   ||||||||| |||||||    
T  10652776 gggttaagatcctctccatttatgtgtttcttcatttcttcaatttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgat 10652678  T
Q  574 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
    ||||||||||| ||||| ||| ||||||||||| |         ||||||||||||||||||| ||| | |||||||||||  |||||||||||||||||    
T  10652677 ggtgggacccaattagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatctt 10652578  T
Q  674 caccc 678  Q
    |||||    
T  10652577 caccc 10652573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 487 - 675
Target Start/End: Complemental strand, 44859314 - 44859128
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 586  Q
    ||||||||||| |||||| ||  ||||||  |||||||||||||||||||| | |||| ||  | |||||||||||||| ||||||||||||||||||||    
T  44859314 ctctccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatggtgggacccact 44859215  T
Q  587 tagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    ||||||||| ||||||||||||        ||||||||||||| |||||| ||| |||||||||||||||||||| |||||||||||||    
T  44859214 tagtggtagaacccaccatcta--tttttagtctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatcttca 44859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 484 - 678
Target Start/End: Complemental strand, 10672662 - 10672470
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||| |||||||||||||||  |||| ||| ||||||||||||||| | ||||||||| || || |   |||||||||| ||||||||||||||| |    
T  10672662 atcctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatggtgggactc 10672563  T
Q  584 acttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||| ||||||||||        |||||  ||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||||    
T  10672562 acttagtggtaggatccaccatctattttttgtgtcta--tctctccaacttgcaaaactccatttattttgccaaatggagagaatcttcaccc 10672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 24101940 - 24102065
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||||||||| || |||| ||  |||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||| ||     
T  24101940 gatcctctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaact 24102039  T
Q  583 cacttagtggtaggacccaccatcta 608  Q
    ||||||||||||||| ||||||||||    
T  24102040 cacttagtggtaggatccaccatcta 24102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 488 - 607
Target Start/End: Complemental strand, 28319048 - 28318929
Alignment:
Q  488 tctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 587  Q
    |||||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||| || || ||| |||||||||| |||||||||| ||||||||||    
T  28319048 tctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatggttggacccactt 28318949  T
Q  588 agtggtaggacccaccatct 607  Q
    ||||||||||||||| ||||    
T  28318948 agtggtaggacccactatct 28318929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 484 - 678
Target Start/End: Original strand, 45113195 - 45113390
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||||||||||| |  ||||  |||| | ||||||||||||||| ||||||||||||| ||||| ||||||||| |||| |||||||| |||||| |    
T  45113195 atcctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatgatgggacac 45113294  T
Q  584 acttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||| ||||||||||||||         |||||| ||||||||| ||| ||| | | |||||||||  ||||||||||||||||| ||||    
T  45113295 acttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaatggagaggatcttaaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 483 - 585
Target Start/End: Complemental strand, 12177715 - 12177613
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||| ||||||||||||||| |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12177715 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12177616  T
Q  583 cac 585  Q
    |||    
T  12177615 cac 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 483 - 585
Target Start/End: Complemental strand, 12422143 - 12422041
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||| ||||||||||||||| |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12422143 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12422044  T
Q  583 cac 585  Q
    |||    
T  12422043 cac 12422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 8412179 - 8412294
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||||||||||||| |||||  |||| |||||||| |||||||||| ||||||||||| ||||| ||| |||||||||| ||| ||||||| || |     
T  8412179 atcctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaaagtaaaatataattaacgatggtgagatct 8412278  T
Q  584 acttagtggtaggacc 599  Q
    ||||||||||||||||    
T  8412279 acttagtggtaggacc 8412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 481 - 602
Target Start/End: Complemental strand, 27490159 - 27490038
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||||| ||| | ||||||||||||||| ||| |||||||||| |||||||  |  ||    
T  27490159 aagatcttctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgatatttaga 27490060  T
Q  581 cccacttagtggtaggacccac 602  Q
    | ||||||||| ||||| ||||    
T  27490059 ctcacttagtgataggatccac 27490038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 476 - 544
Target Start/End: Original strand, 5033023 - 5033091
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaat 544  Q
    |||| |||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||    
T  5033023 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 617 - 678
Target Start/End: Original strand, 5033310 - 5033371
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcaccc 5033371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 493 - 678
Target Start/End: Complemental strand, 37966583 - 37966400
Alignment:
Q  493 atttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtgg 592  Q
    |||||||| |||||| |||||||  ||||||||||||||||| ||||||||  || || ||| |||||||||| ||||| |  ||||   || |||||||    
T  37966583 atttatgtctttctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataattaatggtattggg-ttcaattagtgg 37966485  T
Q  593 taggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||| || |||||        || ||||||||| ||| ||| |||| ||||||||||||| ||||||||||||||||| ||||    
T  37966484 taggacctacaatctattttttgtgtttatctctcttcaaattgcaaat-tccatttattttgccaaatggagaggatcttaaccc 37966400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 510 - 600
Target Start/End: Complemental strand, 36748611 - 36748525
Alignment:
Q  510 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggaccc 600  Q
    ||||||||||||||||||||||||||||| | || |||||  ||||||||  |||| |||||||||||||| ||||||| |||||||||||    
T  36748611 tttcttccatttggagagataaagacacagagaagcttga--aaaataaa--ataattaatgatggtgggatccacttaatggtaggaccc 36748525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 601
Target Start/End: Complemental strand, 26749626 - 26749581
Alignment:
Q  556 taaaatataactaatgatggtgggacccacttagtggtaggaccca 601  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  26749626 taaaaaataattaatgatggtgggacccacttagtgataggaccca 26749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 1937233 - 1937185
Alignment:
Q  556 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 604  Q
    ||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  1937233 taaaaaataattaatgatggtgggacccgcttagtgataggacccacca 1937185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 604
Target Start/End: Original strand, 34612498 - 34612609
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   ||| || |||| |||||||| ||||||||||||||||||||         ||   |||| |||| ||||||||||| |||||    
T  34612498 atcctctccatttataaatttttccatttgttccatttagagagataaagacacataaa---------aagtaaaaaaataattaatgatggtgagaccc 34612588  T
Q  584 acttagtggtaggacccacca 604  Q
    |||||||| ||||||||||||    
T  34612589 acttagtgataggacccacca 34612609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 509 - 543
Target Start/End: Original strand, 21492733 - 21492767
Alignment:
Q  509 atttcttccatttggagagataaagacacataaaa 543  Q
    |||||||||||||||||||||||||||||| ||||    
T  21492733 atttcttccatttggagagataaagacacacaaaa 21492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 543
Target Start/End: Original strand, 24241507 - 24241569
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    |||||| ||||||||||| |   |||| ||||| ||||||| |||||||||||||||||||||    
T  24241507 aagatcttctccatttatttccctctccatttcctccatttagagagataaagacacataaaa 24241569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 478 - 536
Target Start/End: Original strand, 44888554 - 44888612
Alignment:
Q  478 gtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagaca 536  Q
    |||||||||||||||||||||   | |||| |||| ||| |||||||||||||||||||    
T  44888554 gtgaagatcctctccatttataattgtctccattttttctatttggagagataaagaca 44888612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 17867727 - 17867690
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  17867727 taatgatggtgggatccacttagtgataggacccacca 17867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 2e-79; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 476 - 678
Target Start/End: Complemental strand, 18625579 - 18625377
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  18625579 gggtgaagatcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatgg 18625480  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  18625479 tgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 18625380  T
Q  676 ccc 678  Q
    |||    
T  18625379 ccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 476 - 681
Target Start/End: Complemental strand, 35660767 - 35660562
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    |||| ||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  35660767 gggttaagatcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 35660668  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  35660667 tgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 35660568  T
Q  676 cccgtc 681  Q
    ||||||    
T  35660567 cccgtc 35660562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 32129768 - 32129573
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  32129768 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 32129669  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  32129668 cacttagtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttcaccc 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 13032043 - 13032237
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  13032043 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt-aaaaaaataaaatataattaatgatggtgggacc 13032141  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    || ||||||||||||| |||||||||        |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  13032142 catttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 13032237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 37266655 - 37266850
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  37266655 gatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgatggtgggacc 37266754  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||| |||||||||||||        |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  37266755 cacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 37266850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 481 - 678
Target Start/End: Original strand, 39902337 - 39902534
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| |    
T  39902337 aagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaa 39902436  T
Q  581 cccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
     ||| |||||||||||||||||||||||        || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  39902437 tccatttagtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccc 39902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 476 - 675
Target Start/End: Original strand, 11775709 - 11775909
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatg 574  Q
    |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||| |    
T  11775709 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacg 11775808  T
Q  575 gtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  11775809 gtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 11775908  T
Q  675 a 675  Q
    |    
T  11775909 a 11775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 483 - 670
Target Start/End: Complemental strand, 4895886 - 4895699
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||| ||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  4895886 gatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 4895787  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggat 670  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||| ||| |||||||||||||| |||||  |||||||    
T  4895786 cacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaataaagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 476 - 678
Target Start/End: Original strand, 14349721 - 14349922
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    |||| |||||| |||||||||||||||||||| |||||||  ||||||| ||||||||||||||||| ||||||| ||| |||||||||| |||||||||    
T  14349721 gggttaagatcttctccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatgg 14349819  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||||||||||||||||||||        |||| ||||||||||||||  ||| |||||||||||||  ||||| |||||||||||||    
T  14349820 tgggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatcttca 14349919  T
Q  676 ccc 678  Q
    |||    
T  14349920 ccc 14349922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 40753313 - 40753118
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||| ||||| |||||||  |||||||||||||||  |||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  40753313 gatcctctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 40753214  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||| ||        |||||||| ||||||||||| ||| ||  |||||||||| ||||| ||||||||||||||||    
T  40753213 cacttagtggtaggacccaccatatattttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttcaccc 40753118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 484 - 608
Target Start/End: Original strand, 4592726 - 4592849
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  4592726 atcctctccatttatgtgtttctccatttcttcaatttggagagataat-acacataaaatattgaaaaaagtaaaatataattaatgatggtgggaccc 4592824  T
Q  584 acttagtggtaggacccaccatcta 608  Q
    ||||||||||| |||||||||||||    
T  4592825 acttagtggtaagacccaccatcta 4592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 34827118 - 34827311
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggac 581  Q
    ||||||| |||||||| ||||| || |||||||  ||||| |||||||||||||||  |||| ||||| |||| |||||||||| ||| |||||||||||    
T  34827118 gatcctcaccatttatatgttt-tccatttcttaaatttgaagagataaagacaca--aaattttgaaaaaaagtaaaatataattaaagatggtgggac 34827214  T
Q  582 ccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||||| ||||||||||        |||||||||||||||||||| | | ||||||||||||||  ||||||||| |||||||||||    
T  34827215 ccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttattttgctaaatggagatgatcttcaccc 34827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 483 - 662
Target Start/End: Complemental strand, 8441122 - 8440943
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||| ||||||||||||||||||||  |||| || ||||||||||||||| ||||||| |||||| || ||| |||||||||| |||||||||||||||     
T  8441122 gatcatctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatggtgggaca 8441023  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatg 662  Q
    |||||||||||| | | |||||||||        ||||||||  |||||||||| ||| |||||||||||||| ||||||    
T  8441022 cacttagtggtatgtcgcaccatctatttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 483 - 586
Target Start/End: Complemental strand, 1475789 - 1475686
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||| ||||||||||||| |  |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  1475789 gatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 1475690  T
Q  583 cact 586  Q
    ||||    
T  1475689 cact 1475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 481 - 679
Target Start/End: Original strand, 3057338 - 3057535
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||| ||||||||||||| | ||||| |||||||||||| |||||||||||||||| ||||  ||||| ||| || || |||| |||||||| ||| |    
T  3057338 aagatcatctccatttatgtttctctcactttcttccattttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatgatggaa 3057437  T
Q  581 cccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
    | ||||| ||||||||| ||| |||||         |||||||||||||| | ||| ||| ||| |||||||||   |||||||||||||||| |||||    
T  3057438 ctcactttgtggtaggatccatcatcttttttttttgtctatctctctccgaattg-aaaactctatttattttacaaaatggagaggatcttaacccg 3057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 503 - 676
Target Start/End: Original strand, 43309062 - 43309225
Alignment:
Q  503 ttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 602  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||          |||||||||||| ||||| ||| ||||| || ||||    
T  43309062 ttctccatttcttcaatttgaagagataaagacacataaaatcttgaaaaaaat----------taatgatggtggaacccatttaatggtaagatccac 43309151  T
Q  603 catctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcac 676  Q
     |||||        |||||||||||||||||||| ||| ||||||||||||| ||||||  |||||||||||||    
T  43309152 tatctattttttatgtctatctctctccaacttgcaaaactccatttattttatcaaataaagaggatcttcac 43309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 3057307 - 3057180
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||| |||||| |||||| | |||| |||||||| ||||| |||||||||||||| |||| | || || ||| |||||||||| |||||||  || ||    
T  3057307 aagatcttctccaattatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgtga 3057208  T
Q  581 cccacttagtggtaggacccaccatcta 608  Q
    | |||||| |||||||| ||||||||||    
T  3057207 ctcacttaatggtaggatccaccatcta 3057180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 481 - 600
Target Start/End: Original strand, 10173870 - 10173985
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||||||||||||||  ||||| ||||| | |||||||||||||||||||||    ||| ||||| ||| ||||| |||| |||||||||| | |    
T  10173870 aagatcctctccatttatgtccttctccatttccttcatttggagagataaagacac----aattttgaaaaaagtaaaaaataattaatgatggtagaa 10173965  T
Q  581 cccacttagtggtaggaccc 600  Q
    |||| |||||| ||||||||    
T  10173966 cccatttagtgataggaccc 10173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 510 - 602
Target Start/End: Complemental strand, 28142901 - 28142807
Alignment:
Q  510 tttcttccatttggagagataaagacacataaaa-tcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggacccac 602  Q
    ||||||||||||||| ||  |||||||||||||| ||||||| |||| |||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  28142901 tttcttccatttggaaaggcaaagacacataaaaatcttgaaaaaaagtaaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 567 - 685
Target Start/End: Original strand, 29341003 - 29341120
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggaga 666  Q
    |||||||||||||||||||||| | ||||||||||| |||||        |||||||||||||||| ||| | | ||||||||||| |  ||||||||||    
T  29341003 taatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgcata-ctccatttattataccaaatggaga 29341101  T
Q  667 ggatcttcacccgtcagaa 685  Q
    ||||||| |||||||||||    
T  29341102 ggatctttacccgtcagaa 29341120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 509 - 673
Target Start/End: Original strand, 32793324 - 32793487
Alignment:
Q  509 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 608  Q
    ||||||| |||||| ||||||||||||  ||||||||||||| ||| |||||||||| | ||||| |||||||| ||||||| ||| ||  || ||||||    
T  32793324 atttctttcatttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataattgatgattgtgggacctacttagtagtaagaatcatcatcta 32793423  T
Q  609 nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
            || |||||||||| || ||||||| ||||||||||||||  |||| || ||||||||    
T  32793424 ttttttgtgtatatctctctctaaattgtaaa-ctccatttattttgctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 481 - 534
Target Start/End: Complemental strand, 4348173 - 4348120
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaaga 534  Q
    ||||||||||| |||||||| ||||||||||| || ||||||||||||||||||    
T  4348173 aagatcctctctatttatgtctttctcaatttgttacatttggagagataaaga 4348120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 604
Target Start/End: Complemental strand, 3041390 - 3041338
Alignment:
Q  552 aaaataaaatataactaatgatggtgggacccacttagtggtaggacccacca 604  Q
    ||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  3041390 aaaataaaaaataattaatgatggtgggacccgcttagtgataggacccacca 3041338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 504 - 595
Target Start/End: Original strand, 14688519 - 14688610
Alignment:
Q  504 tctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtag 595  Q
    |||| |||||||||||||||||||||||||||| | ||||  || || ||| | ||| ||| ||||||||||||| | ||||||| ||||||    
T  14688519 tctctatttcttccatttggagagataaagacatacaaaaatttaaaaaaagtcaaaaatatctaatgatggtggaatccacttaatggtag 14688610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 544
Target Start/End: Original strand, 23253716 - 23253778
Alignment:
Q  482 agatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaat 544  Q
    ||||||| ||||||||  | |||||| |||||| ||||||||||||||| |||||||||||||    
T  23253716 agatcctatccatttaaatttttctccatttctaccatttggagagatagagacacataaaat 23253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 604
Target Start/End: Original strand, 36290537 - 36290647
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   ||| |  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||||||||| ||    
T  36290537 atcctctccatttataaattttttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggatcc 36290626  T
Q  584 acttagtggtaggacccacca 604  Q
    |||||||| ||||||||||||    
T  36290627 acttagtgataggacccacca 36290647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 597
Target Start/End: Complemental strand, 2984472 - 2984427
Alignment:
Q  552 aaaataaaatataactaatgatggtgggacccacttagtggtagga 597  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||||    
T  2984472 aaaataaaaaataattaatgatggtgggacccatttagtgatagga 2984427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 10242766 - 10242811
Alignment:
Q  493 atttatgtgtttctcaatttcttccatttggagagataaagacaca 538  Q
    |||||||| | |||| |||||| |||||||||||||||||||||||    
T  10242766 atttatgtttctctccatttctaccatttggagagataaagacaca 10242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 40162737 - 40162774
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40162737 taatgatggtgggatccacttagtgataggacccacca 40162774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 1e-77; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 476 - 675
Target Start/End: Original strand, 13238598 - 13238797
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  13238598 gggtgaagatcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatgg 13238697  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||| ||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13238698 tgggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 13238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 483 - 680
Target Start/End: Original strand, 35316749 - 35316946
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||| ||||||||| |||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  35316749 gatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 35316848  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
    ||||||||||||||| ||||||||||        |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  35316849 cacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccgt 35316946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 476 - 679
Target Start/End: Original strand, 28564808 - 28565012
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatc-ttgaacaaaataaaatataactaatgatg 574  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| || || ||| |||||||||| ||||||||    
T  28564808 gggtgaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatg 28564907  T
Q  575 gtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||| ||||||  ||| |||||||||||||| ||||||||||||||||||    
T  28564908 gtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatcttc 28565007  T
Q  675 acccg 679  Q
    |||||    
T  28565008 acccg 28565012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 492 - 678
Target Start/End: Complemental strand, 23259629 - 23259443
Alignment:
Q  492 catttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtg 591  Q
    |||||||  ||||||  |||||||| |||| ||| |||||||||| |||||||||| || ||| |||||||||| |||||||||||||| |||||||||     
T  23259629 catttatacgtttcttcatttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatggtgggatccacttagta 23259530  T
Q  592 gtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||| |||        |||||||||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||    
T  23259529 gtaggacccaccagctattttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 23259443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 477 - 585
Target Start/End: Original strand, 39465693 - 39465801
Alignment:
Q  477 ggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 576  Q
    ||||| ||||||||||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||    
T  39465693 ggtgatgatcctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggt 39465792  T
Q  577 gggacccac 585  Q
    |||||||||    
T  39465793 gggacccac 39465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 475 - 573
Target Start/End: Complemental strand, 41983498 - 41983401
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 573  Q
    ||||| ||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| |||||||||| ||| |||||||||| |||||||    
T  41983498 ggggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 481 - 564
Target Start/End: Original strand, 2061299 - 2061382
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatata 564  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  2061299 aagatcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 481 - 573
Target Start/End: Complemental strand, 374591 - 374499
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 573  Q
    ||||| |||||||||||||||||||||  |||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||||||    
T  374591 aagattctctccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 497 - 585
Target Start/End: Complemental strand, 45625199 - 45625111
Alignment:
Q  497 atgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 585  Q
    ||||||||||| |||||||| |||| ||||||||||||||| |||||||||||| || |||||||| || |||||||||||||||||||    
T  45625199 atgtgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatggtgggacccac 45625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 617 - 680
Target Start/End: Complemental strand, 45625096 - 45625033
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  45625096 gtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccgt 45625033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 617 - 680
Target Start/End: Original strand, 11864927 - 11864990
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  11864927 gtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcacccgt 11864990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 483 - 580
Target Start/End: Original strand, 10877626 - 10877724
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatct--tgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||||| ||||||||||| |    || ||||| |||||||| ||||||||||||||    
T  10877626 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaa-acacataaaatttaaaaaaaaaaatgaaatataattaatgatggtggga 10877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 584
Target Start/End: Original strand, 12949392 - 12949494
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||| ||||||| ||||| ||||||  ||||| | ||||||||||||||||| ||||||||||||||| ||| ||||| |||| |||||| || ||||    
T  12949392 aagatcttctccatctatgtctttctccgtttctcctatttggagagataaagatacataaaatcttgaaaaaagtaaaa-ataattaatgacggcggga 12949490  T
Q  581 ccca 584  Q
    ||||    
T  12949491 ccca 12949494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 599
Target Start/End: Original strand, 8988791 - 8988895
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   |||||| |||| |||||||| ||||||||||||||||||           ||||||||| |||| |||||||||||||||||    
T  8988791 atcctctccatttataaatttctccatttgttccatttagagagataaagacacata-----------aaaataaaaaataattaatgatggtgggaccc 8988879  T
Q  584 acttagtggtaggacc 599  Q
    |||||||| |||||||    
T  8988880 acttagtgataggacc 8988895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 567 - 678
Target Start/End: Original strand, 2063361 - 2063472
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggaccca-ccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggag 665  Q
    |||||||||||| |||||||| ||||||||||| | |||||||        |||||||||||||||| ||| ||| ||| ||||||||||||||||| ||    
T  2063361 taatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgcaaa-ctctatttattttgtcaaatgaag 2063459  T
Q  666 aggatcttcaccc 678  Q
    |||||||| ||||    
T  2063460 aggatcttaaccc 2063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 541
Target Start/End: Complemental strand, 42075510 - 42075456
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataa 541  Q
    ||||||||||||  |||| || |||||||||||||||||||||||||||||||||    
T  42075510 ctctccatttattagtttatccatttcttccatttggagagataaagacacataa 42075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 488 - 604
Target Start/End: Original strand, 374932 - 375038
Alignment:
Q  488 tctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 587  Q
    |||||||||||   |||||| |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||||||||||||||||    
T  374932 tctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggacccactt 375021  T
Q  588 agtggtaggacccacca 604  Q
    |||  ||||||||||||    
T  375022 agtaataggacccacca 375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 604
Target Start/End: Original strand, 29188588 - 29188698
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   |||||| |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  29188588 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 29188677  T
Q  584 acttagtggtaggacccacca 604  Q
     ||||||| |||||| |||||    
T  29188678 gcttagtgataggacgcacca 29188698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 10989590 - 10989735
Alignment:
Q  14 gaaaatcaactggagagattttgtttgctgaagcaggagatgattttattaactttgttttcggttttctaactctgccct--taggagaagtgttggcg 111  Q
    ||||||||||||||||| ||||||||| ||||| ||| |  ||||||||| ||||| ||||| ||||||| ||  | ||||  |||||| |||||||       
T  10989590 gaaaatcaactggagagtttttgtttgttgaaggaggggtagattttattgactttcttttcagttttcttacatttcccttataggaggagtgttg--- 10989686  T
Q  112 ttgcatatgcttgaaggtttctcttctcaaaactgcattgataatttataca 163  Q
     ||  ||||||| |||| |||||||||  || ||||||||||||||||||||    
T  10989687 -tg--tatgcttcaaggattctcttctttaagctgcattgataatttataca 10989735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 515 - 670
Target Start/End: Complemental strand, 4447015 - 4446860
Alignment:
Q  515 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 614  Q
    |||||||||||||||| |||| || |   ||||  | ||| ||||| |||| ||||||| |||  ||||| |||||||||||| |||| |||||          
T  4447015 tccatttggagagatatagactcaaattttcttagaaaaagtaaaaaataattaatgatagtgaaacccaattagtggtaggatccactatctattttat 4446916  T
Q  615 nngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggat 670  Q
      |||||||||||| ||| ||||| |  |||||||||||| |||||||||||||||    
T  4446915 gtgtctatctctcttcaaattgtacacttccatttattttatcaaatggagaggat 4446860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 515 - 601
Target Start/End: Original strand, 30709065 - 30709152
Alignment:
Q  515 tccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggaccca 601  Q
    |||||||||| ||||| |||| || ||||  ||||| |||| ||||| | || |||||||||||||| ||||||||||||||||||||    
T  30709065 tccatttggaaagatatagactcaaaaaaatttgaaaaaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggaccca 30709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 323 - 469
Target Start/End: Original strand, 10990015 - 10990161
Alignment:
Q  323 gtggagaatttgtgaaaggaccatcagtatacatggttacagttgacttgactattactccaatgttgtccttcactgctatatcacatttaaatagttc 422  Q
    ||||||||||||  ||||| |||| |  ||||||||| |||| |||||||  | | |||||||||| ||||||| |||| || |||||| | ||||||||    
T  10990015 gtggagaatttgccaaaggtccattaagatacatggtgacagatgacttggttgtgactccaatgtcgtccttcgctgcaatttcacatctgaatagttc 10990114  T
Q  423 aaatgttcctctgaatgatgtggatgaaaaagttgttacaattggtc 469  Q
    |||| ||||| |   |||||| || ||||| || |||| ||||||||    
T  10990115 aaatattcctgtatctgatgttgaggaaaaggtggttagaattggtc 10990161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 475 - 600
Target Start/End: Complemental strand, 23459995 - 23459880
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 574  Q
    ||||| || |||||||||||||||   |||||| |||| |||||||  |||||||||||||||||||          ||| ||||| |||| ||||||||    
T  23459995 ggggtcaatatcctctccatttataaatttctccatttgttccattcagagagataaagacacataa----------aaagtaaaaaataattaatgatg 23459906  T
Q  575 gtgggacccacttagtggtaggaccc 600  Q
    |||||||||| |||||| ||||||||    
T  23459905 gtgggacccatttagtgataggaccc 23459880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 637 - 675
Target Start/End: Complemental strand, 32009972 - 32009934
Alignment:
Q  637 taaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  32009972 taaaactccatttattttgtcaaatggagaggatcttca 32009934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 678
Target Start/End: Original strand, 19908702 - 19908897
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||||||||||||   | |||  ||||| ||||||| |||||||| ||| ||| ||||  || || | | ||||| |||| ||||||||||||||    
T  19908702 aagatcctctccatttattattctcttcatttcatccatttagagagatatagatacacaaaaatttcaaaacactaaaaaataattaatgatggtggga 19908801  T
Q  581 cccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||   ||||||| ||| |||||        ||||||||| |||||| ||| | | ||||||||||| | ||||||| |||||||||| ||||    
T  19908802 cccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaattgcata-ctccatttattatatcaaatgaagaggatctttaccc 19908897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 620 - 672
Target Start/End: Original strand, 40640731 - 40640783
Alignment:
Q  620 tatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatct 672  Q
    ||||||||||||| ||| ||| |||||||||||||  ||||||||||||||||    
T  40640731 tatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 475 - 513
Target Start/End: Original strand, 673184 - 673222
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttc 513  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  673184 ggggttaagatcctctccatttatgtgtttctccatttc 673222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 546 - 608
Target Start/End: Complemental strand, 21454582 - 21454520
Alignment:
Q  546 ttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 608  Q
    ||||| ||| ||||| |||| |||||||||||| ||||||||| ||||| ||||||| |||||    
T  21454582 ttgaaaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatcta 21454520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 488 - 538
Target Start/End: Complemental strand, 39329980 - 39329930
Alignment:
Q  488 tctccatttatgtgtttctcaatttcttccatttggagagataaagacaca 538  Q
    |||||||||||  || |||| ||||| ||||||||||||||||||||||||    
T  39329980 tctccatttattagtgtctctatttcatccatttggagagataaagacaca 39329930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 13780506 - 13780543
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  13780506 taatgatggtgggatccacttagtgataggacccacca 13780543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 40254217 - 40254180
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccacca 40254180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 144; Significance: 3e-75; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 479 - 678
Target Start/End: Original strand, 4888387 - 4888586
Alignment:
Q  479 tgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg 578  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  4888387 tgaagatcctcttcatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgg 4888486  T
Q  579 gacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||| ||||||||||||||||||| |||||        |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4888487 gacctacttagtggtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcaccc 4888586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 476 - 678
Target Start/End: Complemental strand, 9559211 - 9559010
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  9559211 gggtgaagatc-tctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatgg 9559113  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||||||||||||||||||||         ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9559112 tgggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatcttca 9559013  T
Q  676 ccc 678  Q
    |||    
T  9559012 ccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 487 - 678
Target Start/End: Original strand, 21151080 - 21151271
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 586  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  21151080 ctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccact 21151179  T
Q  587 tagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||| || |||||||        |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  21151180 tagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 270 - 475
Target Start/End: Original strand, 21195479 - 21195684
Alignment:
Q  270 tgtactttataatttgattgatcctaggctctctgcttcaaacccatcaagccgtggagaatttgtgaaaggaccatcagtatacatggttacagttgac 369  Q
    ||||||||  |||||| ||||||||| ||| |||||||||||| ||||||| |||||||||||||  ||||| ||||||||||||||||| |||||||||    
T  21195479 tgtacttttaaatttggttgatcctaagctatctgcttcaaacgcatcaagtcgtggagaatttgcaaaagggccatcagtatacatggtgacagttgac 21195578  T
Q  370 ttgactattactccaatgttgtccttcactgctatatcacatttaaatagttcaaatgttcctctgaatgatgtggatgaaaaagttgttacaattggtc 469  Q
    ||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||  ||||||| ||||||||    
T  21195579 ttggctattactccaatgtcatccttcactgctatatcacatttaaatagttcaaatgtttctctaaatgatgtggaagaaagggttgttagaattggtc 21195678  T
Q  470 agaagg 475  Q
    ||||||    
T  21195679 agaagg 21195684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 16366442 - 16366637
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||| |||| |||||||||||| ||| |||||||||| |||||||||||||||     
T  16366442 gatcatctccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgggaca 16366541  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||| ||||||||||        |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  16366542 cacttagtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 16366637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 488 - 678
Target Start/End: Original strand, 7362497 - 7362686
Alignment:
Q  488 tctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 587  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| ||    
T  7362497 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccattt 7362596  T
Q  588 agtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||| |||||||||||||        |||||||||||||||| ||| ||| ||||||||||||||||||||||||| |||||||||||    
T  7362597 agtggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatggaga-gatcttcaccc 7362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 485 - 677
Target Start/End: Complemental strand, 45260576 - 45260384
Alignment:
Q  485 tcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 584  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| ||||| |||    
T  45260576 tcctctctatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggatcca 45260477  T
Q  585 cttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacc 677  Q
    ||||||||||||| |||| |||||        |||||||||||||||||||| ||| ||| |||||||||| |||||||||||||||||||||    
T  45260476 cttagtggtaggatccacaatctattttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatcttcacc 45260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 18198180 - 18198375
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| ||||| |||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||     
T  18198180 gatcctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggact 18198279  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||| || ||||||||||||        |||||| | ||||||| ||| ||| |||||||||||||| ||||||||||||||||||||||    
T  18198280 cacttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcaccc 18198375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 269 - 467
Target Start/End: Original strand, 21200724 - 21200923
Alignment:
Q  269 atgtactttataatttgattgatcctaggctctctgcttcaaac-ccatcaagccgtggagaatttgtgaaaggaccatcagtatacatggttacagttg 367  Q
    |||||||||  |||||| ||||||||| ||| |||||||||||| |||||||| ||||||||||| |  ||||||||||||||||||||||| |||| ||    
T  21200724 atgtacttttaaatttggttgatcctaagctatctgcttcaaacaccatcaagtcgtggagaattcgcaaaaggaccatcagtatacatggtgacagctg 21200823  T
Q  368 acttgactattactccaatgttgtccttcactgctatatcacatttaaatagttcaaatgttcctctgaatgatgtggatgaaaaagttgttacaattgg 467  Q
    ||||||||||  ||||| ||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||  ||||||| ||||||    
T  21200824 acttgactatcgctccattgtcgtccttcactgctatatcacatttaaatagttcaaatgtttctctaaatgatgtggaagaaagggttgttagaattgg 21200923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 9 - 230
Target Start/End: Original strand, 21200347 - 21200562
Alignment:
Q  9 gagatgaaaatcaactggagagattttgtttgctgaagcaggagatgattttattaactttgttttcggttttctaactctgcccttaggagaagtgttg 108  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| | || || |||| |||        
T  21200347 gagaagaaaatcaactggagagattttgtttgctgaagcaagagatgattttattaactttattttcagttttctaactttccctttgggaggagt---- 21200442  T
Q  109 gcgttgcatatgcttgaaggtttctcttctcaaaactgcattgataatttatacaaaagtgttactgagttgagtcctgaaagttattttatctcaaatc 208  Q
      ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| || || |||||||| || ||||  ||||| |||||||| |    
T  21200443 --gttgcatatgcttcaaggtttctcttctttaaactgcattgataatttatacaaaagcgtgaccgagttgagccccgaaacgtatttaatctcaaacc 21200540  T
Q  209 atctcaaagtgaacctaattaa 230  Q
    ||||||||| ||| ||||||||    
T  21200541 atctcaaagagaaactaattaa 21200562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 9 - 229
Target Start/End: Original strand, 21195101 - 21195315
Alignment:
Q  9 gagatgaaaatcaactggagagattttgtttgctgaagcaggagatgattttattaactttgttttcggttttctaactctgcccttaggagaagtgttg 108  Q
    |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||| |||||||||| |||        
T  21195101 gagaagaaaatcaactggagatattttgtttgctgaagcaggcgatgattttattaactttattttcagttttctaactctccccttaggaggagt---- 21195196  T
Q  109 gcgttgcatatgcttgaaggtttctcttctcaaaactgcattgataatttatacaaaagtgttactgagttgagtcctgaaagttattttatctcaaatc 208  Q
      ||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||  | |||||||||||| | ||| ||||||| ||||  || |    
T  21195197 --gttgcatatgcttgaaggtttctcttctctaaacagcatcgataatttatacaaaagcttgactgagttgagttccgaatgttatttaatcttgaaac 21195294  T
Q  209 atctcaaagtgaacctaatta 229  Q
    |||| |||| ||| |||||||    
T  21195295 atcttaaagagaagctaatta 21195315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 44647889 - 44648083
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg--ga 580  Q
    ||||||||||||||||||||||||| |||||||| |||||   ||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||  ||    
T  44647889 gatcctctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatggagggaga 44647985  T
Q  581 cccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||| ||| ||||||||||        |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  44647986 cccacttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 44648083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 12139252 - 12139446
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga-c 581  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||  |||||||||||||| || ||| |||||||||| |||||||||||||| |    
T  12139252 gatcctctccatttatgtgtttctccatttcttcaatttggagagataa--acacataaaatcttaaaaaaagtaaaatataattaatgatggtgggacc 12139349  T
Q  582 ccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||| |||||||||||||||||||        |||||||||||||||||||| ||| || ||||||||||| |||||| |||| ||||||||||    
T  12139350 ccacttaatggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaatgaagagaatcttcaccc 12139446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 483 - 675
Target Start/End: Complemental strand, 47226224 - 47226035
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| ||||||||||||||||    
T  47226224 gatcctctccatttatgtgtttctctatttcttcaatttggagagataaa-acacataaaatcttggaaaaagtaaaatataattaatgatggtgggacc 47226126  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    || |||||||| ||||||||||  ||        || ||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||    
T  47226125 catttagtggtgggacccacca--tattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 483 - 635
Target Start/End: Complemental strand, 25084879 - 25084727
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||| ||  ||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  25084879 gatcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatggtgggacc 25084780  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaactt 635  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||    
T  25084779 cacttagtggtaggacccaccatctattttttgtgtctatctctctccaactt 25084727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 484 - 678
Target Start/End: Original strand, 33450431 - 33450626
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||| |||||||||  ||||| |||||| ||||||||||||||| | ||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  33450431 atcctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 33450530  T
Q  584 acttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||| ||||||||||||||         |||||||||||||||| ||| ||| ||| |||||||||  ||||||||||||||||| ||||    
T  33450531 acttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 33450626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 484 - 678
Target Start/End: Complemental strand, 47500433 - 47500238
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||||  ||||| |||||| |||||| |||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  47500433 atcctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 47500334  T
Q  584 acttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||| ||||||||||||||         |||||||||||||||| ||  ||| ||| |||||||||   |||||||||||||||| ||||    
T  47500333 acttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaatggagaggatcttaaccc 47500238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 713 - 860
Target Start/End: Original strand, 21200974 - 21201117
Alignment:
Q  713 tttgcaatatattttcattaatttgcatgggttattaattatagtgatttgtttgttaacatattgtagggtctctgcattctgaaaggttggatgaact 812  Q
    |||||||| ||||||||||||||||||||  ||| ||     | |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  21200974 tttgcaatgtattttcattaatttgcatgcattactac----aatgatttgtttgttaacatattgcagggtctctccattctgaaagcttggatgaact 21201069  T
Q  813 caaattctgctatgacaaatggactcaaccaactcataacgatcatta 860  Q
    |||  ||||  |||||||| |||||||||||||||||||| |||||||    
T  21201070 caacgtctgtcatgacaaacggactcaaccaactcataacaatcatta 21201117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 481 - 608
Target Start/End: Original strand, 29630970 - 29631097
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||||||||| |||| |||||| ||||||| |||||||||| ||||||||||||||||| ||||| ||| ||||  |||| ||||||| ||||||    
T  29630970 aagatcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgatagtggga 29631069  T
Q  581 cccacttagtggtaggacccaccatcta 608  Q
    || || ||||||| |||||||| |||||    
T  29631070 cctacatagtggttggacccactatcta 29631097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 713 - 852
Target Start/End: Original strand, 21195723 - 21195858
Alignment:
Q  713 tttgcaatatattttcattaatttgcatgggttattaattatagtgatttgtttgttaacatattgtagggtctctgcattctgaaaggttggatgaact 812  Q
    |||||||||||||| ||||||||||||||  ||||||     | |||||||||||||||||||||| |||||||||||||||| |||| ||||||||| |    
T  21195723 tttgcaatatatttacattaatttgcatgaattattac----aatgatttgtttgttaacatattgcagggtctctgcattctaaaagcttggatgaatt 21195818  T
Q  813 caaattctgctatgacaaatggactcaaccaactcataac 852  Q
    |||  ||||  ||||||||||| || |||||| |||||||    
T  21195819 caacgtctggaatgacaaatgggctaaaccaattcataac 21195858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 484 - 679
Target Start/End: Complemental strand, 34986095 - 34985900
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||| |||||| |||||| ||||||||||||||| ||  ||||||||| ||| || ||||||||| |||| |||||||| ||||||     
T  34986095 atcctctccatttatgtctttctccatttctaccatttggagagatatag--acataaaattttgaaaaaaaataaaaaataattaatgatgatgggact 34985998  T
Q  583 cacttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
    || ||||||||  |||||||||||||         |||||||||||||||| ||| ||| ||| |||||||||  ||||| |||||||| || |||||    
T  34985997 catttagtggtttgacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaattgagaggattttaacccg 34985900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 481 - 602
Target Start/End: Original strand, 32915881 - 32915999
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||| ||||  ||    |||| ||||||||| | ||||||||||||    
T  32915881 aagatcctccccatttatgttcttctccatttcttccatttggagagataaagacacaaaaaagttt---taaaaaaaaatataattcatgatggtggga 32915977  T
Q  581 cccacttagtggtaggacccac 602  Q
    | |||||| |||||||||||||    
T  32915978 ctcacttaatggtaggacccac 32915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 534 - 678
Target Start/End: Complemental strand, 39855913 - 39855770
Alignment:
Q  534 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaac 633  Q
    |||| |||||||||||| ||| |||||| ||| |||||||| |||||||||||||||||||||||| |||||||         ||||||||||||||||     
T  39855913 acacttaaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaaa 39855814  T
Q  634 ttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||  ||| ||||||||| ||||||||||| |||| ||||| ||||    
T  39855813 ttacaaa-ctccatttaatttgtcaaatgaagagaatcttaaccc 39855770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 185
Target Start/End: Original strand, 24284872 - 24285037
Alignment:
Q  14 gaaaatcaactggagagattttgtttgctgaagcaggagatgattttattaactttgttttcggttttctaactctgcccttaggagaagtgttggcgtt 113  Q
    |||||||||| |||||||||||||||| ||||| ||| |  ||||||||| ||||| ||||  ||||||||||  | ||||| || | |||||||         
T  24284872 gaaaatcaaccggagagattttgtttgttgaaggaggggtagattttattgactttatttttagttttctaaccttccccttggggggagtgttg----- 24284966  T
Q  114 gcatatgcttgaaggtttctcttctcaaaactgcattgataatttatacaaaagtgttactgagttgagtcc 185  Q
     ||||||||| |||| |||||||||  || |||||||||||||||||| ||||| || ||||| ||||||||    
T  24284967 -catatgcttcaaggattctcttctttaagctgcattgataatttatataaaagcgtaactgaattgagtcc 24285037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 301 - 468
Target Start/End: Original strand, 24285267 - 24285434
Alignment:
Q  301 tctgcttcaaacccatcaagccgtggagaatttgtgaaaggaccatcagtatacatggttacagttgacttgactattactccaatgttgtccttcactg 400  Q
    |||||||||||  |||||||  ||||||||||||  |||||||||||||||||||||||||||| ||||||   | | |||||||  |  ||||||| ||    
T  24285267 tctgcttcaaaatcatcaagttgtggagaatttgcaaaaggaccatcagtatacatggttacagatgacttagttgtgactccaacctcatccttcaatg 24285366  T
Q  401 ctatatcacatttaaatagttcaaatgttcctctgaatgatgtggatgaaaaagttgttacaattggt 468  Q
    |||| |||||| | || |||| ||| ||||| ||   |||||| || |||||||| |||| |||||||    
T  24285367 ctatttcacatctgaagagtttaaacgttcccctatctgatgtagaggaaaaagtggttagaattggt 24285434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 552 - 670
Target Start/End: Original strand, 989122 - 989239
Alignment:
Q  552 aaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttat 651  Q
    |||||| || |||| |||| ||||| ||||| ||||||||||||||||||| || ||        |||||||||||||||| ||| ||| |||||||||     
T  989122 aaaatataaaataattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgcaaa-ctccatttaa 989220  T
Q  652 tttgtcaaatggagaggat 670  Q
    |||||||||||||||||||    
T  989221 tttgtcaaatggagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 504 - 590
Target Start/End: Original strand, 40019626 - 40019712
Alignment:
Q  504 tctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagt 590  Q
    |||||||||| |||||||||||||||||| ||||| ||||||||||| ||| || ||  ||| ||||||||||||||| || |||||    
T  40019626 tctcaatttcctccatttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtgggactcatttagt 40019712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 24231843 - 24231770
Alignment:
Q  35 tgtttgctgaagcaggagatgattttattaactttgttttcggttttctaactctgcccttaggagaagtgttg 108  Q
    |||||| |||||||||||||||||||||| ||||||||||  ||||||||||  | |||||||||| |||||||    
T  24231843 tgtttgttgaagcaggagatgattttattgactttgtttttagttttctaacatttcccttaggaggagtgttg 24231770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 591
Target Start/End: Complemental strand, 30153305 - 30153225
Alignment:
Q  511 ttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtg 591  Q
    |||||||||||||||||||||||||| | ||||  ||||| |||||| || |||| |||||||||| | || |||||||||    
T  30153305 ttcttccatttggagagataaagacaaaaaaaaaattgaaaaaaatataaaataattaatgatggtagtactcacttagtg 30153225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 602
Target Start/End: Complemental strand, 19889174 - 19889066
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||||||| |||   |||||| |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||| ||||    
T  19889174 atcctctccatctataaatttctccatttattccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtggaaccc 19889085  T
Q  584 acttagtggtaggacccac 602  Q
    |||||||| ||||||||||    
T  19889084 acttagtgataggacccac 19889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 484 - 602
Target Start/End: Original strand, 32916104 - 32916212
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   |||||| ||||||||||||| |||||||||| ||||| ||          ||||||||| |||| |||||||||||| | ||    
T  32916104 atcctctccatttataactttctccatttcttccattttgagagataaatacacacaa----------aaaataaaaaataattaatgatggtggaatcc 32916193  T
Q  584 acttagtggtaggacccac 602  Q
    ||||||||||| |||||||    
T  32916194 acttagtggtatgacccac 32916212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 488 - 601
Target Start/End: Original strand, 47080360 - 47080470
Alignment:
Q  488 tctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 587  Q
    |||||||||||   |||||| |||| ||| |||| |||||||| ||||||||||||  |  || ||||||||| ||   ||||||||||||||||| |||    
T  47080360 tctccatttataaatttctccatttgttctatttagagagatagagacacataaaaagtaaaaaaaaataaaaaat---taatgatggtgggacccgctt 47080456  T
Q  588 agtggtaggaccca 601  Q
    |||| |||||||||    
T  47080457 agtgataggaccca 47080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 600
Target Start/End: Original strand, 30588489 - 30588576
Alignment:
Q  503 ttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggaccc 600  Q
    ||||| |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||||||||||||||||||| ||||||||    
T  30588489 ttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggacccacttagtgataggaccc 30588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 608
Target Start/End: Complemental strand, 46802448 - 46802357
Alignment:
Q  515 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 608  Q
    |||||||||||||||||| |||||  |||  ||||| |||  | || |||| ||| | ||||||||||||||||||||||||||||||| ||||    
T  46802448 tccatttggagagataaaaacaca--aaagtttgaagaaagcataaaataattaacggtggtgggacccacttagtggtaggacccaccgtcta 46802357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 617 - 675
Target Start/End: Complemental strand, 47271164 - 47271107
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||| ||| ||| ||||||||||||||  ||||||||||||||||||    
T  47271164 gtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttca 47271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 601
Target Start/End: Complemental strand, 47799978 - 47799933
Alignment:
Q  556 taaaatataactaatgatggtgggacccacttagtggtaggaccca 601  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  47799978 taaaaaataattaatgatggtgggacccacttagtgataggaccca 47799933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 483 - 543
Target Start/End: Complemental strand, 6882209 - 6882149
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    ||||||||| ||||||   |||||| |||| ||||||||| ||||||||||||||||||||    
T  6882209 gatcctctcaatttataactttctccatttgttccatttgaagagataaagacacataaaa 6882149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 598
Target Start/End: Complemental strand, 11828991 - 11828945
Alignment:
Q  552 aaaataaaatataactaatgatggtgggacccacttagtggtaggac 598  Q
    ||||||||| |||| |||||||||||| ||||||||| |||||||||    
T  11828991 aaaataaaaaataattaatgatggtggaacccacttaatggtaggac 11828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 567 - 605
Target Start/End: Complemental strand, 19027751 - 19027713
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccaccat 605  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccat 19027713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 567 - 605
Target Start/End: Original strand, 20726885 - 20726923
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccaccat 605  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccat 20726923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 4269187 - 4269224
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4269187 taatgatggtgggatccacttagtgataggacccacca 4269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 538
Target Start/End: Original strand, 8607963 - 8608020
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacaca 538  Q
    ||||||||||||||||||   |||||| |||| ||||||||||| ||||| |||||||    
T  8607963 aagatcctctccatttataactttctccatttgttccatttggaaagatagagacaca 8608020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 14696825 - 14696788
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  14696825 taatgatggtgggatccacttagtgataggacccacca 14696788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 30102501 - 30102538
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  30102501 taatgatggtgggatccacttagtgataggacccacca 30102538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 534
Target Start/End: Complemental strand, 33609030 - 33608977
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaaga 534  Q
    |||||||| | ||||||||| | |||| |||||||||||||||| |||||||||    
T  33609030 aagatcctttacatttatgtttctctccatttcttccatttggaaagataaaga 33608977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 5e-74; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 477 - 678
Target Start/End: Complemental strand, 50294220 - 50294019
Alignment:
Q  477 ggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 576  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  50294220 ggtgaagaccctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggt 50294121  T
Q  577 gggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcac 676  Q
     ||| |||||||||||||||||||||||||||        |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||    
T  50294120 aggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttcac 50294021  T
Q  677 cc 678  Q
    ||    
T  50294020 cc 50294019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 474 - 678
Target Start/End: Original strand, 50484301 - 50484505
Alignment:
Q  474 gggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 573  Q
    |||||| ||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||     
T  50484301 gggggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgac 50484400  T
Q  574 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
    |||||||||||||||||||| | ||||||||||||        |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  50484401 ggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 50484500  T
Q  674 caccc 678  Q
    |||||    
T  50484501 caccc 50484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 475 - 678
Target Start/End: Complemental strand, 48327313 - 48327110
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgat 573  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||| || |||||||||||||| |||||||    
T  48327313 ggggttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgat 48327214  T
Q  574 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
    ||| ||||||||||||||||||||| |||||||||        |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  48327213 ggt-ggacccacttagtggtaggactcaccatctattttttttgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatctt 48327115  T
Q  674 caccc 678  Q
    |||||    
T  48327114 caccc 48327110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 476 - 679
Target Start/End: Original strand, 12151684 - 12151887
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    |||| ||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  12151684 gggttaagatcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12151783  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    ||||||||||||||||||||||||||| |||||        |||| ||||||||||||| | ||| |||||||||||||| |||||||||| ||||||||    
T  12151784 tgggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatcttca 12151883  T
Q  676 cccg 679  Q
    ||||    
T  12151884 cccg 12151887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 12381061 - 12380936
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12381061 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12380962  T
Q  583 cacttagtggtaggacccaccatcta 608  Q
    ||||||||||||| ||||||||||||    
T  12380961 cacttagtggtagaacccaccatcta 12380936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 12385128 - 12385003
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12385128 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12385029  T
Q  583 cacttagtggtaggacccaccatcta 608  Q
    ||||||||||||| ||||||||||||    
T  12385028 cacttagtggtagaacccaccatcta 12385003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 476 - 680
Target Start/End: Original strand, 40328193 - 40328396
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaa-gacacataaaatcttgaacaaaa-taaaatataactaatgat 573  Q
    |||| |||||||||| |||||||||||||||  |||||||  ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  40328193 gggttaagatcctcttcatttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgat 40328292  T
Q  574 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
    ||||| |||||||||||||| ||||||||||||||        |||||  ||||||||| ||| ||| |||||||||||||| |||||||||||||||||    
T  40328293 ggtggaacccacttagtggtgggacccaccatcta-tttttgtgtcta--tctctccaatttgcaaaactccatttattttgccaaatggagaggatctt 40328389  T
Q  674 cacccgt 680  Q
    | |||||    
T  40328390 cgcccgt 40328396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 484 - 678
Target Start/End: Complemental strand, 23862106 - 23861908
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||| |||| ||||||||||| |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |    
T  23862106 atcctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatggtgggatc 23862007  T
Q  583 cacttagtggtagga---cccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||||    ||||||||||        |||||||||||||||||||| ||| || |||||||||||  |||| |||||||| |||||||    
T  23862006 cacttagtggtaggattcaccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaaatagagaggatattcaccc 23861908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 472 - 585
Target Start/End: Original strand, 45977935 - 45978048
Alignment:
Q  472 aagggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatg 571  Q
    |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |    
T  45977935 aagggggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaacg 45978034  T
Q  572 atggtgggacccac 585  Q
    ||| ||||||||||    
T  45978035 atgctgggacccac 45978048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 487 - 581
Target Start/End: Complemental strand, 7841857 - 7841763
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 581  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  7841857 ctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 7841763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 475 - 680
Target Start/End: Complemental strand, 18976461 - 18976258
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 574  Q
    ||||| || |||||||||||||||||  ||||  |||||| ||||||||||||||| | ||||  ||||| ||||| ||||||||| |||| ||||||||    
T  18976461 ggggtcaaaatcctctccatttatgtccttcttcatttctaccatttggagagatataaacac--aaaattttgaaaaaaataaaa-ataattaatgatg 18976365  T
Q  575 gtgggacccacttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
     ||||||| ||||| |||| ||| ||||||||||         |||||||||||||||| ||| ||| ||| |||||||||  |||||||||||||||||    
T  18976364 atgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatctt 18976265  T
Q  674 cacccgt 680  Q
     ||||||    
T  18976264 aacccgt 18976258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 509 - 608
Target Start/End: Original strand, 24977190 - 24977289
Alignment:
Q  509 atttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggacccaccatct 607  Q
    ||||||| ||||| |||||||||| ||| ||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  24977190 atttcttacatttagagagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccacttagtggtaggatccaccatct 24977288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 481 - 602
Target Start/End: Complemental strand, 46608525 - 46608409
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||||||||||||||    ||| |||||||||||||||||| |||||||||||  || | ||||| ||| ||||| |||| |||||||||||||     
T  46608525 aagatcctctccatttatgtc---ctccatttcttccatttggagaaataaagacaca--aagttttgaaaaaagtaaaaaataattaatgatggtgggt 46608431  T
Q  581 cccacttagtggtaggacccac 602  Q
    ||||||||||||||||||||||    
T  46608430 cccacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 481 - 582
Target Start/End: Original strand, 2845187 - 2845289
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttct-tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 579  Q
    |||||||||||||||||||| |||||| |||||| || ||||||||||||||| ||||| ||||| ||||| | | |||||||||| |||||||||||||    
T  2845187 aagatcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatggtggg 2845286  T
Q  580 acc 582  Q
    |||    
T  2845287 acc 2845289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 481 - 597
Target Start/End: Complemental strand, 5047533 - 5047418
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||||||||||||   | |||| ||||||||||||| ||||||||||| |||| ||||  ||||| |||||| || |||| ||||||||||||||    
T  5047533 aagatcctctccatttattactatctccatttcttccatttagagagataaaggcacaaaaaagtttgaa-aaaatataaaataattaatgatggtggga 5047435  T
Q  581 cccacttagtggtagga 597  Q
    ||||| |||||||||||    
T  5047434 cccacatagtggtagga 5047418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 617 - 678
Target Start/End: Complemental strand, 12380894 - 12380833
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  12380894 gtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12380833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 617 - 678
Target Start/End: Complemental strand, 12384961 - 12384900
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  12384961 gtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12384900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 45978064 - 45978124
Alignment:
Q  618 tctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||| ||||||||||||||||    
T  45978064 tctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttcaccc 45978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 666
Target Start/End: Original strand, 39426166 - 39426317
Alignment:
Q  515 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 614  Q
    |||||||||||||||| |||| || |   ||||  | ||| ||||| |||| ||||||| |||||||||| ||||||||||||||||| |||||          
T  39426166 tccatttggagagatatagactcaaattttcttagaaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccactatctattttat 39426265  T
Q  615 nngtctatctctctccaacttgtaaatctccatttattttgtcaaatggaga 666  Q
      |||||||||||||||| ||||  |  |||||||||||| |||||||||||    
T  39426266 gtgtctatctctctccaaattgtgtacttccatttattttatcaaatggaga 39426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 574 - 678
Target Start/End: Complemental strand, 7840739 - 7840635
Alignment:
Q  574 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
    |||||||||| |||| |||||||||||| ||||||        |||||||||||||||||||  ||| ||||||||||| || |||||| | ||||||||    
T  7840739 ggtgggacccgcttaatggtaggacccatcatctatttcttgtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatctt 7840640  T
Q  674 caccc 678  Q
    |||||    
T  7840639 caccc 7840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 555
Target Start/End: Complemental strand, 1609691 - 1609617
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa 555  Q
    |||||||||| ||||||||| |||  | ||||||| ||||| ||||| |||||||||||||||||||||| ||||    
T  1609691 aagatcctcttcatttatgtcttttcccatttctttcatttagagaggtaaagacacataaaatcttgaagaaaa 1609617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 602
Target Start/End: Complemental strand, 32887910 - 32887812
Alignment:
Q  504 tctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 602  Q
    |||| ||||||| |||||||||||||| |||| || ||||  ||||| |||||  || |||| |||||||||||||||||| ||| |||||||| ||||    
T  32887910 tctccatttctttcatttggagagatatagactcaaaaaagtttgaaaaaaattgaaaataattaatgatggtgggacccatttaatggtaggatccac 32887812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 597
Target Start/End: Original strand, 23916013 - 23916124
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||||||||| | | |||||| |||| || |||||||||| ||||| ||||| ||||| ||||| ||| |  || |||| |||||||||||||||||    
T  23916013 atcctctccatttgtatttttctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatggtgggaccc 23916110  T
Q  584 acttagtggtagga 597  Q
    || |||||||||||    
T  23916111 acgtagtggtagga 23916124  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 487 - 565
Target Start/End: Original strand, 40988643 - 40988721
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 565  Q
    ||||||||||||   |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||| ||||| ||||    
T  40988643 ctctccatttataactttctccattttttctatttggagagataaagacacacaaaattttgaaaaaagtaaaaaataa 40988721  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 503 - 607
Target Start/End: Original strand, 44483712 - 44483815
Alignment:
Q  503 ttctcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacccacttagtggtaggaccca 601  Q
    ||||| ||||||| |||||| ||||||||||||||  | ||| ||| || ||||||||| |||| |||||||||||| | ||| ||| ||||||||||||    
T  44483712 ttctccatttcttgcatttgaagagataaagacac--acaattttgaaaaaaaataaaaaataattaatgatggtggaatccatttaatggtaggaccca 44483809  T
Q  602 ccatct 607  Q
    | ||||    
T  44483810 caatct 44483815  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 561
Target Start/End: Original strand, 6816294 - 6816370
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaat 561  Q
    ||||||| ||||||||| ||||||||||||||  |||||  || ||||| |||||| |||||||||| ||||||||||    
T  6816294 atcctcttcatttatgtctttctcaatttcttttatttgaggatataaaaacacatgaaatcttgaa-aaaataaaat 6816370  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 591
Target Start/End: Original strand, 19910469 - 19910583
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttc-----ttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatg 574  Q
    |||| ||||| ||||||||| |||||| |||||     ||||||||||||||||||  ||||||||||| ||| || |||||||||||||| |||| |||    
T  19910469 aagaacctcttcatttatgtctttctctatttcttccattccatttggagagataa--acacataaaattttgaaaaaaaataaaatataattaataatg 19910566  T
Q  575 gtgggacccacttagtg 591  Q
    ||  ||||||| |||||    
T  19910567 gtatgacccacctagtg 19910583  T

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Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 52280117 - 52280069
Alignment:
Q  556 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 604  Q
    ||||| |||| |||||||||||||| |||||||||| ||||||||||||    
T  52280117 taaaaaataattaatgatggtgggatccacttagtgataggacccacca 52280069  T

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Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 597
Target Start/End: Original strand, 7844939 - 7845026
Alignment:
Q  510 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 597  Q
    ||||||||||||| ||||||||||| ||| | ||  ||||| ||| || ||  ||| |||| |||||||||| |||||||||||||||    
T  7844939 tttcttccatttgaagagataaagatacaaagaagtttgaaaaaagtataaactaattaataatggtgggacacacttagtggtagga 7845026  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 504 - 606
Target Start/End: Complemental strand, 24413402 - 24413310
Alignment:
Q  504 tctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccacc 603  Q
    |||||||||||||||||| ||| ||||| |||||| |||||||||          || |||| |||||||||||||||||| ||| || |||||||||||    
T  24413402 tctcaatttcttccattttgagggataaggacacaaaaaatcttg----------aaaataattaatgatggtgggacccatttaatgataggacccacc 24413313  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 543
Target Start/End: Complemental strand, 30077784 - 30077725
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    |||||||||||||||   |||||| |||| |||||||| |||| ||||||||||||||||    
T  30077784 atcctctccatttataaatttctctatttgttccatttagagaaataaagacacataaaa 30077725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 503 - 573
Target Start/End: Complemental strand, 42720888 - 42720819
Alignment:
Q  503 ttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 573  Q
    ||||| ||||||| ||||| |||||||||||||||||||| | ||||| |||||| || |||| |||||||    
T  42720888 ttctccatttctttcatttagagagataaagacacataaagttttgaa-aaaatacaaaataaataatgat 42720819  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 6948899 - 6948862
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6948899 taatgatggtgggatccacttagtgataggacccacca 6948862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 574
Target Start/End: Original strand, 45970804 - 45970861
Alignment:
Q  517 catttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 574  Q
    |||||| ||||||||||||||| ||||| ||||| ||| ||||| |||| ||||||||    
T  45970804 catttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatg 45970861  T

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Target: chr6 (Bit Score: 136; Significance: 2e-70; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 4804372 - 4804567
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  4804372 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 4804471  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  4804472 cacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 4804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 475 - 677
Target Start/End: Complemental strand, 1249305 - 1249105
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 574  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  1249305 ggggttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 1249206  T
Q  575 gtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    ||||||||||||||||||||||||||||||||||        |||| ||||||||||||||  ||| |||||||||||||| ||||||||||||||||||    
T  1249205 gtgggacccacttagtggtaggacccaccatcta--ttttttgtctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatcttc 1249108  T
Q  675 acc 677  Q
    |||    
T  1249107 acc 1249105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 7162008 - 7162203
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||| ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7162008 gatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 7162107  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||| |||||||||||||||||        |||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||    
T  7162108 cacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 475 - 675
Target Start/End: Original strand, 27826454 - 27826654
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 574  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||  | |||||||||||||| ||||||||    
T  27826454 ggggtgaagatcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatg 27826553  T
Q  575 gtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    ||||||||||||||||||||||||||||||||||        ||||||||||||| | |||| |||||| || |||||||  ||||||||||||||||||    
T  27826554 gtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatcttc 27826653  T
Q  675 a 675  Q
    |    
T  27826654 a 27826654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 21159516 - 21159325
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||| |||||||||    | |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  21159516 gatcctctccgtttatgtgt----ccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 21159421  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||||||        |||||| ||||||||||||| ||| || ||||||||||  ||||||||||||||||||||||    
T  21159420 cacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttcaccc 21159325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 499 - 678
Target Start/End: Original strand, 17944102 - 17944281
Alignment:
Q  499 gtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 598  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| |||||||||||||||||| |||||||||||||    
T  17944102 gtgtttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggac 17944201  T
Q  599 ccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    | ||||||||        |||||||||||||||||||  ||| |||||||||||||| |||||| |||||||||||||||    
T  17944202 ctaccatctattttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcaccc 17944281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 504 - 678
Target Start/End: Original strand, 12412582 - 12412756
Alignment:
Q  504 tctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccacc 603  Q
    |||| |||||||| ||||||||||||||| | ||||||||| ||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  12412582 tctccatttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccacc 12412681  T
Q  604 atctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||        |||||||||||||||||||| ||| |||||||||||||| |||||||||| |||||| ||||    
T  12412682 atctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 483 - 608
Target Start/End: Original strand, 29698087 - 29698212
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29698087 gatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 29698186  T
Q  583 cacttagtggtaggacccaccatcta 608  Q
    |||||| |||||||| ||||||||||    
T  29698187 cacttaatggtaggatccaccatcta 29698212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 534 - 679
Target Start/End: Complemental strand, 13089849 - 13089704
Alignment:
Q  534 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaac 633  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||    
T  13089849 acacataaaattttgaaaaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaac 13089750  T
Q  634 ttgtaaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
    ||| ||| | |||||||||||| |||||||||||||||||||||||    
T  13089749 ttgcaaaacaccatttattttgccaaatggagaggatcttcacccg 13089704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 483 - 585
Target Start/End: Original strand, 32737798 - 32737900
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||| |||    
T  32737798 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtggaacc 32737897  T
Q  583 cac 585  Q
    |||    
T  32737898 cac 32737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 484 - 675
Target Start/End: Complemental strand, 227714 - 227522
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||| |||||||||| ||||| |||||| | ||||||||||||| ||||||| ||| | ||||| ||  ||||| ||||  ||||||| ||||| ||    
T  227714 atcctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatcc 227615  T
Q  584 acttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||||||||||||         ||||||||||||||||  || ||| |||||||||||||  |||||||||||||||||||    
T  227614 acttagtggtaggacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatcttca 227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 509 - 680
Target Start/End: Original strand, 30460770 - 30460944
Alignment:
Q  509 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggta----ggacccacca 604  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||| | || ||||| || ||| |||||    ||| ||| ||    
T  30460770 atttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaataacggcgggactcatttaatggtaggatggatccatca 30460869  T
Q  605 tctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
     |||        |||||||| ||||||| ||| ||| ||||||||||||||||||||||||| ||| || ||||||    
T  30460870 actactttttgtgtctatctttctccaaattgcaaa-ctccatttattttgtcaaatggagatgatgttaacccgt 30460944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 671
Target Start/End: Complemental strand, 2800730 - 2800574
Alignment:
Q  515 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 614  Q
    |||||||||||||||| | || || ||||  ||||| ||| ||||| ||||  ||||||||||||||||||||| ||||| || |||| |||||          
T  2800730 tccatttggagagatataaactcaaaaaaaattgaaaaaagtaaaaaataatcaatgatggtgggacccacttaatggtatgatccactatctattttat 2800631  T
Q  615 nngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatc 671  Q
      |||||||||||||||| ||||  || |||||| ||||| ||||||||||||||||    
T  2800630 gtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatc 2800574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 567 - 670
Target Start/End: Complemental strand, 7215919 - 7215816
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggaga 666  Q
    ||||||| |||||||||| ||||||||||||||||| |||||        |||||||||||||||| ||||  |  |||||||||||| |||||||||||    
T  7215919 taatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatggaga 7215820  T
Q  667 ggat 670  Q
    ||||    
T  7215819 ggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 678
Target Start/End: Original strand, 32737915 - 32737976
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||| || ||| ||| |||||||||| ||||||||||||||||||||||    
T  32737915 gtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccc 32737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 510 - 555
Target Start/End: Complemental strand, 17398818 - 17398773
Alignment:
Q  510 tttcttccatttggagagataaagacacataaaatcttgaacaaaa 555  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  17398818 tttcctccatttggagagataaagacacataaaatcttgaaaaaaa 17398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 585
Target Start/End: Complemental strand, 1516314 - 1516238
Alignment:
Q  509 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 585  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1516314 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 509 - 585
Target Start/End: Complemental strand, 1518403 - 1518327
Alignment:
Q  509 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 585  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1518403 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1518327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 556 - 604
Target Start/End: Original strand, 24484876 - 24484924
Alignment:
Q  556 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 604  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  24484876 taaaaaataattaatgatggtgggacccacttagtgataggacccacca 24484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 597
Target Start/End: Original strand, 2720366 - 2720411
Alignment:
Q  552 aaaataaaatataactaatgatggtgggacccacttagtggtagga 597  Q
    |||||| || |||| |||||||||||||||||||||||||||||||    
T  2720366 aaaatataaaataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 543
Target Start/End: Complemental strand, 28696782 - 28696731
Alignment:
Q  492 catttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    ||||||||||| |||| ||||||  |||||||||||||||||||||| ||||    
T  28696782 catttatgtgtctctccatttctatcatttggagagataaagacacaaaaaa 28696731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 621 - 679
Target Start/End: Complemental strand, 1516219 - 1516162
Alignment:
Q  621 atctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
    |||||||||||| ||| ||| |||||||||||||| |||||||| |||||||| |||||    
T  1516219 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaacccg 1516162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 621 - 679
Target Start/End: Complemental strand, 1518308 - 1518251
Alignment:
Q  621 atctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
    |||||||||||| ||| ||| |||||||||||||| |||||||| |||||||| |||||    
T  1518308 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaacccg 1518251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 7098263 - 7098226
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  7098263 taatgatggtgggatccacttagtgataggacccacca 7098226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 509 - 602
Target Start/End: Original strand, 17275921 - 17276014
Alignment:
Q  509 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 602  Q
    |||| ||| |||||||||||||||||  ||||||||||| || ||||||||| |||| |||  || ||||| | ||  ||||||| ||||||||    
T  17275921 atttattctatttggagagataaagatgcataaaatcttaaaaaaaataaaaaataattaactatagtggggctcatatagtggtgggacccac 17276014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 2e-70; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 475 - 678
Target Start/End: Complemental strand, 19902077 - 19901874
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 574  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||    
T  19902077 ggggttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 19901978  T
Q  575 gtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||||||||| ||| |||||||||||||  ||||||||||||||||||    
T  19901977 gtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatcttc 19901878  T
Q  675 accc 678  Q
    ||||    
T  19901877 accc 19901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 476 - 678
Target Start/End: Original strand, 24073534 - 24073735
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| || |||||| |||||||||    
T  24073534 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaa-aaaaaaatatataattaatgatgg 24073632  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
     ||||||||||||||||||||||||||||||||        |||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||    
T  24073633 cgggacccacttagtggtaggacccaccatctatttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatcttca 24073732  T
Q  676 ccc 678  Q
    |||    
T  24073733 ccc 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 18207191 - 18206996
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||  |||||||||| |||||||| |||||||    
T  18207191 gatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatgatgggacc 18207092  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||||||        ||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||||||    
T  18207091 cacttagtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttcaccc 18206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 56558203 - 56558398
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  56558203 gatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 56558302  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||| ||||||||||||||||        |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  56558303 cacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 56558398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 476 - 678
Target Start/End: Original strand, 23610559 - 23610761
Alignment:
Q  476 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 575  Q
    |||| |||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||  |||||||||    
T  23610559 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatgg 23610658  T
Q  576 tgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    ||||||||||||||||||| |||||||||||||        |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||    
T  23610659 tgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatcttca 23610758  T
Q  676 ccc 678  Q
    |||    
T  23610759 ccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 484 - 677
Target Start/End: Original strand, 34778346 - 34778539
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  34778346 atcctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 34778445  T
Q  584 acttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacc 677  Q
    |||||||||||||| ||||||||||        |||||||||||| ||||||| ||| |||||||||||||| |||||||||||||||||||||    
T  34778446 acttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 34778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 483 - 679
Target Start/End: Complemental strand, 33247279 - 33247085
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||| |||    
T  33247279 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatggtggaacc 33247182  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
    || |||||||||| ||||||||||||        |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||    
T  33247181 catttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccg 33247085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 495 - 678
Target Start/End: Complemental strand, 3952309 - 3952126
Alignment:
Q  495 ttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggta 594  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggta 3952210  T
Q  595 ggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||        ||||||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||    
T  3952209 ggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcaccc 3952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 5763313 - 5763118
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  5763313 gatcatctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 5763214  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||||||         ||||||||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||||    
T  5763213 cacttagtggtaggacccaccatctattttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttcaccc 5763118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 484 - 678
Target Start/End: Complemental strand, 5416617 - 5416422
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgatggtgggac 581  Q
    |||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| || ||||  |||||||||| |||||||||||||||    
T  5416617 atcctctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgatggtgggac 5416518  T
Q  582 ccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||| |||||        |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  5416517 ccacttagtggtaggacccacaatcta-tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 481 - 678
Target Start/End: Complemental strand, 38079873 - 38079676
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| |    
T  38079873 aagatcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaa 38079774  T
Q  581 cccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
     ||||||||| |||||||||||||||||        ||||||||||||| |||| | ||| ||||||||||||||| |||||||||||||||||||||    
T  38079773 tccacttagtagtaggacccaccatctatttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcaccc 38079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 483 - 679
Target Start/End: Original strand, 39862441 - 39862637
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| ||     
T  39862441 gatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaact 39862540  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
    || |||||| |||||| |||||||||        ||||||||||||| |||||| |||  || ||||||||| ||||||||||||||||||||||||    
T  39862541 catttagtgataggacacaccatctattttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttcacccg 39862637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 483 - 602
Target Start/End: Complemental strand, 12241559 - 12241440
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  12241559 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 12241460  T
Q  583 cacttagtggtaggacccac 602  Q
    ||||||||||||||||||||    
T  12241459 cacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 487 - 680
Target Start/End: Complemental strand, 33262699 - 33262506
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 586  Q
    |||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||| || || ||| |||||||||| |||||||||||||||| | |    
T  33262699 ctctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctatt 33262600  T
Q  587 tagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
    ||||||||||| ||||||||||        ||||||||||||| |||||| ||| | | |||||||||| ||||| ||||||||||||||||||    
T  33262599 tagtggtaggatccaccatctattttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcacccgt 33262506  T

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Target: chr4; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 483 - 680
Target Start/End: Original strand, 12153095 - 12153275
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||         
T  12153095 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg----- 12153189  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
                ||||||||||||||        |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||    
T  12153190 ------------ggacccaccatctaatttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccgt 12153275  T

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Target: chr4; HSP #16
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 483 - 608
Target Start/End: Complemental strand, 47922226 - 47922101
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||| ||||||||||||||| |||||||| |||| ||||||||||||||| |||||| ||||| |||||||||||||  |||||||||||| |||    
T  47922226 gatcctctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatggtggaacc 47922127  T
Q  583 cacttagtggtaggacccaccatcta 608  Q
    |||||||||||| ||||||| |||||    
T  47922126 cacttagtggtaagacccactatcta 47922101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 526 - 666
Target Start/End: Original strand, 30567868 - 30568008
Alignment:
Q  526 agataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctc 625  Q
    ||||||||||||||||||| ||||| ||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||        |||||||||    
T  30567868 agataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctc 30567967  T
Q  626 tctccaacttgtaaatctccatttattttgtcaaatggaga 666  Q
    ||| ||||||| ||| |||||||||||||| ||||||||||    
T  30567968 tcttcaacttgcaaaactccatttattttgccaaatggaga 30568008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 538 - 679
Target Start/End: Complemental strand, 12312572 - 12312430
Alignment:
Q  538 ataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnn-gtctatctctctccaacttg 636  Q
    |||||||||| || ||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||         ||||||||||||||||||||    
T  12312572 ataaaatcttaaagaaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttg 12312473  T
Q  637 taaatctccatttattttgtcaaatggagaggatcttcacccg 679  Q
     ||| |||||||||||||| |||||||||||||||||||||||    
T  12312472 caaaactccatttattttgccaaatggagaggatcttcacccg 12312430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 483 - 571
Target Start/End: Original strand, 52018707 - 52018795
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatg 571  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  52018707 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatg 52018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 484 - 608
Target Start/End: Complemental strand, 31862370 - 31862246
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||| |||||| |  ||||| |||||| ||||||||||||||| ||||||| ||||| ||  | ||| ||||| |||| |||||||||||||||||    
T  31862370 atcctctcaatttatatccttctctatttctaccatttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatggtgggaccc 31862271  T
Q  584 acttagtggtaggacccaccatcta 608  Q
    |||||||||||||| ||||||||||    
T  31862270 acttagtggtaggatccaccatcta 31862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 483 - 577
Target Start/End: Complemental strand, 17080791 - 17080697
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 577  Q
    ||||| ||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||| | ||| ||||||||||  ||||||||||    
T  17080791 gatcccctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgatggtg 17080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 487 - 565
Target Start/End: Complemental strand, 12312650 - 12312572
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 565  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||| ||||| ||| ||||||||||    
T  12312650 ctctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataa 12312572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 484 - 673
Target Start/End: Complemental strand, 47922517 - 47922327
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    ||||||||||||||| | ||| || |||||| ||||||| || |||| | ||||| ||| | ||||| ||| ||||| |||| ||  |||| ||||||||    
T  47922517 atcctctccatttatttctttatccatttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatgatgggaccc 47922418  T
Q  584 acttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
    |||||||||||||||||||||||||         |||||| ||||||||| ||| ||| ||| |||||||||  |||||||||||||||||    
T  47922417 acttagtggtaggacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatctt 47922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 518 - 671
Target Start/End: Original strand, 1871237 - 1871388
Alignment:
Q  518 atttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnng 617  Q
    ||||||||||||||||||||| | ||  ||||| |||||| || |||| |||||||| ||||||||||||||| |||||| |||| |||||        |    
T  1871237 atttggagagataaagacacaaagaaatttgaa-aaaatataaaataattaatgatgatgggacccacttagtagtaggatccactatctatattttttg 1871335  T
Q  618 tctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatc 671  Q
    ||||||||||||||| ||| | | |||||||||||||||||||| |||||||||    
T  1871336 tctatctctctccaaattgcata-ctccatttattttgtcaaattgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 25442328 - 25442200
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaa-ataaaatataactaatgatggtggg 579  Q
    |||||||||||||||||||   ||||| |||||||||||||||||||||||||||||| | |||  | || |||  ||||| |||| |||||  |||| |    
T  25442328 aagatcctctccatttatggccttctccatttcttccatttggagagataaagacacacacaattataaaaaaagttaaaaaataattaatgtcggtgag 25442229  T
Q  580 acccacttagtggtaggacccaccatcta 608  Q
    | ||||||||||||||||||||| |||||    
T  25442228 atccacttagtggtaggacccacaatcta 25442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 33524321 - 33524381
Alignment:
Q  618 tctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  33524321 tctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccc 33524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 473 - 604
Target Start/End: Complemental strand, 56269228 - 56269106
Alignment:
Q  473 agggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatga 572  Q
    ||||||| || |||||||||||||||   |||||| |||| |||||||| |||||||||||||||||||||  |          |||| |||| ||||||    
T  56269228 agggggtcaatatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaaagta---------aaaaaataattaatga 56269138  T
Q  573 tggtgggacccacttagtggtaggacccacca 604  Q
    ||||||||||||||||||||||||||||||||    
T  56269137 tggtgggacccacttagtggtaggacccacca 56269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 618 - 678
Target Start/End: Original strand, 52018822 - 52018882
Alignment:
Q  618 tctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||    
T  52018822 tctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccc 52018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 604
Target Start/End: Original strand, 5524382 - 5524492
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||||||||||||    
T  5524382 atcctctccatttataaatttttccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 5524471  T
Q  584 acttagtggtaggacccacca 604  Q
    ||||| || ||||||||||||    
T  5524472 acttactgataggacccacca 5524492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 484 - 604
Target Start/End: Complemental strand, 37002391 - 37002281
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   |||||| |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  37002391 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 37002302  T
Q  584 acttagtggtaggacccacca 604  Q
    |||||||  ||||| ||||||    
T  37002301 acttagtaataggatccacca 37002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 678
Target Start/End: Original strand, 23474062 - 23474229
Alignment:
Q  510 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctan 609  Q
    |||| |||||||||||||||| | ||||| ||||  || || ||| |||||  ||| ||||||||||||||  |||| | | |||||||||||||||||     
T  23474062 tttcatccatttggagagatataaacacacaaaaaattcaaaaaattaaaaagtaattaatgatggtgggattcactcaatagtaggacccaccatctat 23474161  T
Q  610 nnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
           ||||||||||| |||| ||| | | ||||||||||| ||  |||||||||||||||| ||||    
T  23474162 tttatgtgtctatctctccccaaattgcata-ctccatttattatgctaaatggagaggatctttaccc 23474229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 584
Target Start/End: Complemental strand, 33841934 - 33841854
Alignment:
Q  504 tctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 584  Q
    |||| ||||| |||||||||| ||||||||||||| ||||||||||| | | || |  |||| ||||||||||||||||||    
T  33841934 tctccatttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtgggaccca 33841854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 491 - 576
Target Start/End: Complemental strand, 43447723 - 43447638
Alignment:
Q  491 ccatttatgtgtttctcaatttcttccatttggagagataaagacacat-aaaatcttgaacaaaataaaatataactaatgatggt 576  Q
    |||||||||| |||||| ||| |||  |||| ||||||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||    
T  43447723 ccatttatgtctttctctatt-cttttatttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatggt 43447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 601
Target Start/End: Original strand, 3326438 - 3326559
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagat-aaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 579  Q
    ||||||||||||||||||||  | ||| |||||||  |||| ||||||| ||||||| | ||| | ||||| ||| ||||| |||| |||| |||||||     
T  3326438 aagatcctctccatttatgtcctcctccatttctttaattttgagagataaaagacaaaaaaagttttgaaaaaagtaaaaaataattaataatggtgga 3326537  T
Q  580 acccacttagtggtaggaccca 601  Q
    ||||| ||| ||||| ||||||    
T  3326538 acccatttaatggtatgaccca 3326559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 556 - 604
Target Start/End: Complemental strand, 48084603 - 48084555
Alignment:
Q  556 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 604  Q
    ||||| |||| ||||||||||||||||||||||||| ||| ||||||||    
T  48084603 taaaaaataattaatgatggtgggacccacttagtgctagaacccacca 48084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 475 - 543
Target Start/End: Original strand, 56563892 - 56563960
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    ||||| |||||||||||||||||| |   |||| ||||  ||||||| |||||||||||||||||||||    
T  56563892 ggggtcaagatcctctccatttatttccctctctattttctccatttagagagataaagacacataaaa 56563960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 531
Target Start/End: Complemental strand, 22584998 - 22584951
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataa 531  Q
    |||||||||||||||  || |||||||||||| |||||||||||||||    
T  22584998 atcctctccatttattagtctctcaatttctttcatttggagagataa 22584951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 532
Target Start/End: Complemental strand, 23119537 - 23119486
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaa 532  Q
    |||||| |||||||||||  || |||| ||||||||||||||||||||||||    
T  23119537 aagatcatctccatttattagtctctccatttcttccatttggagagataaa 23119486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 543
Target Start/End: Original strand, 4404222 - 4404284
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    |||||||||||||||||| |   |||| ||||| ||||||| || ||||||||||||||||||    
T  4404222 aagatcctctccatttatttccctctccatttcctccatttagaaagataaagacacataaaa 4404284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 16567442 - 16567388
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacaca 538  Q
    ||||||| ||||||||| | ||||||||||||| ||||| | |||||||||||||    
T  16567442 atcctctacatttatgtttctctcaatttcttcaatttgaaaagataaagacaca 16567388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 25219003 - 25219040
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  25219003 taatgatggtgggatccacttagtgataggacccacca 25219040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 32146510 - 32146547
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32146510 taatgatggtgggatccacttagtgataggacccacca 32146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 46238974 - 46239011
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccacca 46239011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 671
Target Start/End: Original strand, 49811509 - 49811538
Alignment:
Q  642 ctccatttattttgtcaaatggagaggatc 671  Q
    ||||||||||||||||||||||||||||||    
T  49811509 ctccatttattttgtcaaatggagaggatc 49811538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Original strand, 53526096 - 53526133
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  53526096 taatgatggtgggatccacttagtgataggacccacca 53526133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 55160438 - 55160401
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  55160438 taatgatggtgggatccacttagtgataggacccacca 55160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 128; Significance: 1e-65; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 207987 - 208182
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| |||||||    
T  207987 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggacc 208086  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||||||        || ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  208087 cacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 208182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 1e-65; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 43720098 - 43719903
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  43720098 gatcttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatggtgggacc 43719999  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||||||||| || ||        |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||    
T  43719998 cacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttcaccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 499 - 678
Target Start/End: Original strand, 27033591 - 27033770
Alignment:
Q  499 gtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 598  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  27033591 gtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggac 27033690  T
Q  599 ccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||        |||||||||||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||    
T  27033691 ccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 476 - 678
Target Start/End: Complemental strand, 19830591 - 19830387
Alignment:
Q  476 gggtgaagatcctctccattt-atgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgat 573  Q
    |||| |||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| || |||  |||||||||| |||||||    
T  19830591 gggttaagatcctctccattttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgat 19830492  T
Q  574 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
    ||||||||||||||| |||||||||||||||||||        |||||| |||| |||||||| ||| |||||||||||||| |||||||||||||||||    
T  19830491 ggtgggacccacttaatggtaggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatctt 19830392  T
Q  674 caccc 678  Q
    |||||    
T  19830391 caccc 19830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 2229907 - 2230102
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    |||||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||| | |    
T  2229907 gatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtggaaac 2230006  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||| ||||||        |||||||||||||||||||| ||| ||||| |||||||| |||||||||||||| |||||||    
T  2230007 cacttagtggtaggacccatcatctattttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggatgttcaccc 2230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 483 - 676
Target Start/End: Original strand, 40851697 - 40851891
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatat-aactaatgatggtgggac 581  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |  |||||||||| ||||    
T  40851697 gatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatggtaggac 40851796  T
Q  582 ccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcac 676  Q
    |||||||||||| | ||||||||||||        |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  40851797 ccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatcttcac 40851891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 483 - 678
Target Start/End: Original strand, 34373755 - 34373950
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||  ||||||||||  |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  34373755 gatcctctccatcaatgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 34373854  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
     | |||||||||||||||||||||||        |||||||||||||||||||| ||| | | |||||||||| ||||||||||| ||||||||||    
T  34373855 taattagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcaccc 34373950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 488 - 608
Target Start/End: Complemental strand, 34373731 - 34373611
Alignment:
Q  488 tctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 587  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  34373731 tctccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 34373632  T
Q  588 agtggtaggacccaccatcta 608  Q
    |||||||||||||||||||||    
T  34373631 agtggtaggacccaccatcta 34373611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 488 - 675
Target Start/End: Original strand, 46167322 - 46167509
Alignment:
Q  488 tctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 587  Q
    ||||||||||||||||| || |||||||| |||| |||||||||||||| ||| ||||||||| ||| |||||||||| |||| ||||| ||| ||||||    
T  46167322 tctccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccactt 46167421  T
Q  588 agtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttca 675  Q
    |||||||||||||||||| ||        |||||||||||||||||||  ||| ||||||||||||||  ||||||||||||| ||||    
T  46167422 agtggtaggacccaccatatattttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatggagaggatgttca 46167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 484 - 680
Target Start/End: Original strand, 48084744 - 48084941
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||||  ||||| |||||| ||||||||||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  48084744 atcctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 48084843  T
Q  584 acttagtggtaggacccaccatcta-nnnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacccgt 680  Q
    |||||||||| ||||||||||||||         ||||||||||| |||| ||| ||| ||| |||||||||  ||||||||||||||||| ||||||    
T  48084844 acttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaatggagaggatcttaacccgt 48084941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 481 - 608
Target Start/End: Complemental strand, 550969 - 550842
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||| || || ||| |||||||||| |||| |||||||||    
T  550969 aagatcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtggga 550870  T
Q  581 cccacttagtggtaggacccaccatcta 608  Q
    |||||||| || ||||| ||||||||||    
T  550869 cccacttaatgataggatccaccatcta 550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 487 - 654
Target Start/End: Original strand, 12402893 - 12403061
Alignment:
Q  487 ctctccatttatgtgtttct-caatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggaccca 584  Q
    |||||||||||||||||||| || ||||||  |||||||||||||||||||||||||||||| || |||| |||||||||| |||| |||||||||| ||    
T  12402893 ctctccatttatgtgtttcttcattttctta-atttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggactca 12402991  T
Q  585 cttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttatttt 654  Q
    ||||||||||| | ||||||||||         ||||||||||||||||||| ||| ||| |||||||||    
T  12402992 cttagtggtagaatccaccatctaatttttatatctatctctctccaacttgcaaaactctatttatttt 12403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 575 - 679
Target Start/End: Original strand, 24754673 - 24754777
Alignment:
Q  575 gtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 24754772  T
Q  675 acccg 679  Q
    |||||    
T  24754773 acccg 24754777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 575 - 679
Target Start/End: Original strand, 24763670 - 24763774
Alignment:
Q  575 gtgggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 24763769  T
Q  675 acccg 679  Q
    |||||    
T  24763770 acccg 24763774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 508 - 597
Target Start/End: Complemental strand, 566899 - 566811
Alignment:
Q  508 aatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 597  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||| |||| | ||||||||||||||| || |||||    
T  566899 aatttcttccatttggagagataaaaatacataaaatcttgaa-aaagtaaaatataaataataaaggtgggacccacttaatgatagga 566811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 608
Target Start/End: Complemental strand, 40810505 - 40810382
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||| ||| || ||||||  |||| ||||||||| | |||||  |||| ||||| |||| ||||| |||| |||||||| |||||||    
T  40810505 atcctctccatttatgtctttttccatttctatcattaggagagatataaacaca--aaattttgaaaaaaaataaaaaataattaatgatgatgggacc 40810408  T
Q  583 cacttagtggtaggacccaccatcta 608  Q
    |||||||||||  |||||||||||||    
T  40810407 cacttagtggttagacccaccatcta 40810382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 481 - 581
Target Start/End: Complemental strand, 52859534 - 52859433
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaa-aataaaatataactaatgatggtggg 579  Q
    ||||| |||| ||||||||| |||||| |||||| ||||||||||| ||||| |||||||||||||| || || | |||||||||| ||||||| |||||    
T  52859534 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgattgtggg 52859435  T
Q  580 ac 581  Q
    ||    
T  52859434 ac 52859433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 626 - 678
Target Start/End: Original strand, 24647905 - 24647957
Alignment:
Q  626 tctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 24647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 475 - 604
Target Start/End: Original strand, 42613006 - 42613125
Alignment:
Q  475 ggggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 574  Q
    ||||| || |||||||||||||||   |||||| |||| ||| |||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  42613006 ggggtcaatatcctctccatttataaatttctccatttgttctatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 42613095  T
Q  575 gtgggacccacttagtggtaggacccacca 604  Q
    ||||||||||||||||| ||||||||||||    
T  42613096 gtgggacccacttagtgataggacccacca 42613125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 604
Target Start/End: Complemental strand, 31523808 - 31523698
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   |||||| |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  31523808 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 31523719  T
Q  584 acttagtggtaggacccacca 604  Q
    |||||||  ||||||||||||    
T  31523718 acttagtaataggacccacca 31523698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 543
Target Start/End: Original strand, 3009171 - 3009233
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    ||||||||||||||||||   |||||| |||| |||||||| |||||||||||||||||||||    
T  3009171 aagatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 3009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 482 - 544
Target Start/End: Complemental strand, 20485870 - 20485808
Alignment:
Q  482 agatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaat 544  Q
    ||||||||||||||||  | |||||| |||||| ||||||||||||||| | |||||||||||    
T  20485870 agatcctctccatttaaatttttctccatttctaccatttggagagatataaacacataaaat 20485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 543
Target Start/End: Complemental strand, 49289104 - 49289042
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    |||||| ||| ||||||||| |||||| |||| || |||||||||| ||||||||||||||||    
T  49289104 aagatcatcttcatttatgtttttctccatttgtttcatttggagaaataaagacacataaaa 49289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 32577476 - 32577528
Alignment:
Q  503 ttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaat 556  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  32577476 ttctccatttcttctatttggagagataaagacaca-aaaatcttgaaaaaaat 32577528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 600
Target Start/End: Complemental strand, 49679410 - 49679304
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   |||||| |||| || ||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  49679410 atcctctccatttataaatttctccatttgtttcatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 49679321  T
Q  584 acttagtggtaggaccc 600  Q
    | |||||| ||||||||    
T  49679320 atttagtgataggaccc 49679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 481 - 580
Target Start/End: Original strand, 2310233 - 2310330
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||| |||||||||| ||| || |  ||||||||||||| |||||||||||||||  ||||| || || ||| ||||| |||| |||||||| |||||    
T  2310233 aagatcatctccatttacgtgcttatttatttcttccatttagagagataaagacac--aaaattttaaagaaagtaaaaaataattaatgatgatggga 2310330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 588
Target Start/End: Original strand, 29586259 - 29586365
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||| |||||||||||   | |||| ||||| ||||||| |||||||||||||||| ||||  | ||| ||| |||||  ||| ||||||||||| ||    
T  29586259 aagatcatctccatttattattctctccatttcatccatttagagagataaagacacaaaaaaattcgaa-aaactaaaaagtaattaatgatggtgaga 29586357  T
Q  581 cccactta 588  Q
    ||||||||    
T  29586358 cccactta 29586365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 543
Target Start/End: Complemental strand, 41727089 - 41727030
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaa 543  Q
    |||||||| |||||||| |||||| |||||||| ||||| | ||| ||||||||||||||    
T  41727089 atcctctcgatttatgtttttctctatttcttctatttgaaaagacaaagacacataaaa 41727030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 547
Target Start/End: Complemental strand, 778972 - 778906
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatctt 547  Q
    |||||||||||||||||    ||||||  ||||||||||||| ||||||||||| ||| ||||||||    
T  778972 aagatcctctccatttaaacttttctctctttcttccatttgtagagataaagaaacaaaaaatctt 778906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 118; Significance: 1e-59; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 478 - 678
Target Start/End: Complemental strand, 9354 - 9157
Alignment:
Q  478 gtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 577  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| || |||||  ||||||| |||||||||||    
T  9354 gtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatctt-aaaaaaat--aatataattaatgatggtg 9258  T
Q  578 ggacccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcacc 677  Q
    | | |||||||||||| ||||||||||||||        |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  9257 gaatccacttagtggttggacccaccatctattttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttcacc 9158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 112; Significance: 4e-56; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 483 - 678
Target Start/End: Complemental strand, 16548 - 16353
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||| ||||||||||||||| |||||||| |||||||||||||||   ||||||||||||||| |||||||||||||| |||||||| |||||||    
T  16548 gatcctctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatgatgggacc 16449  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    ||||||||||||||||||||||| ||        |||||||||||||||||||| ||| |||||||||||||| | || |||||||||||||||||    
T  16448 cacttagtggtaggacccaccatttattttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacggagaggatcttcaccc 16353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 108; Significance: 9e-54; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 483 - 679
Target Start/End: Original strand, 7071 - 7271
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 582  Q
    ||||||||||||||||||||||||  |||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||    
T  7071 gatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatggtggaacc 7170  T
Q  583 cacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctcc----atttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||| | |||||||||||||||||        |||||||||||||||||||| ||| ||||    |||||||||| ||||||||||||||||||||||    
T  7171 cacttaatagtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttattttgccaaatggagaggatcttcaccc 7270  T
Q  679 g 679  Q
    |    
T  7271 g 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 487 - 585
Target Start/End: Complemental strand, 73987 - 73889
Alignment:
Q  487 ctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 585  Q
    ||||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  73987 ctctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatgggacccac 73889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 73874 - 73817
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttc 674  Q
    |||||||||||||||||||| ||| | |||||||||||| ||||| ||||||||||||    
T  73874 gtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 481 - 678
Target Start/End: Complemental strand, 22595 - 22399
Alignment:
Q  481 aagatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 580  Q
    |||||| ||||||||||||| | |||| ||||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||| || |||| |    
T  22595 aagatcttctccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaa 22496  T
Q  581 cccacttagtggtaggacccaccatctannnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    | ||||||||||||||| |||| |||||        |||||||||| |  || ||| ||| ||||||||||||||  ||||| |||||||||| ||||    
T  22495 ctcacttagtggtaggatccactatctattttttgtgtctatctctttgtaaattgcaaa-ctccatttattttgctaaatgcagaggatcttaaccc 22399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 62; Significance: 3e-26; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 504 - 585
Target Start/End: Original strand, 13641 - 13722
Alignment:
Q  504 tctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 585  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  13641 tctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 617 - 678
Target Start/End: Original strand, 13738 - 13799
Alignment:
Q  617 gtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatcttcaccc 678  Q
    |||||||||||||||||| | ||| ||| |||||||||| |||||||||| |||||||||||    
T  13738 gtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 510 - 673
Target Start/End: Complemental strand, 6559 - 6396
Alignment:
Q  510 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctan 609  Q
    ||||||| |||| |||||||||||||||||||||||||| | ||| |||||||||| |||||||||| | ||||| ||||| |||||||||||||||||     
T  6559 tttcttcaattttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatctat 6460  T
Q  610 nnnnnnngtctatctctctccaacttgtaaatctccatttattttgtcaaatggagaggatctt 673  Q
           |||| ||||| ||||||||| |||   |||||||||||   |||| |||||||||||    
T  6459 tttttgtgtctgtctctttccaacttgcaaaatcccatttattttacgaaatagagaggatctt 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 601
Target Start/End: Complemental strand, 17446 - 17339
Alignment:
Q  484 atcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 583  Q
    |||||||||||||||   |||||  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||||||||||||    
T  17446 atcctctccatttataaatttcttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 17357  T
Q  584 acttagtggtaggaccca 601  Q
    |||||||| |||||||||    
T  17356 acttagtgataggaccca 17339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 483 - 581
Target Start/End: Original strand, 5534 - 5632
Alignment:
Q  483 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 581  Q
    |||||||||||||||||    |||  |||||||||||||||||||||||||||| | | ||  ||||| ||| || || |||| |||||||| ||||||    
T  5534 gatcctctccatttatgatcctcttcatttcttccatttggagagataaagacataaagaagtttgaaaaaagtataaaataattaatgatgatgggac 5632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 604
Target Start/End: Complemental strand, 4768 - 4731
Alignment:
Q  567 taatgatggtgggacccacttagtggtaggacccacca 604  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4768 taatgatggtgggatccacttagtgataggacccacca 4731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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