View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1586_high_17 (Length: 249)
Name: NF1586_high_17
Description: NF1586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1586_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 48453275 - 48453048
Alignment:
| Q |
1 |
atttaaacatgctaatattctaatacatattgagtttattacacttgtatctccattatctttccaaatatagccttttgatttgattcctttatggagt |
100 |
Q |
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| T |
48453275 |
atttaaacatcctaatattctaatacatattgagtttattacacttgtatctccattatctttccaaatatagccttttgatttgattcctttatggagt |
48453176 |
T |
|
| Q |
101 |
tgcaagttttcattggaagtattttatgtgtatagttatacaagtttttgttattagtttagaaaaaatgcttaggnnnnnnnagtttcattcatcgata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
48453175 |
tgcaagttttcattggaagtattttatgtgtatagttatacaagtttttgttattagtttagaaaaaatgcttaggtttttttagtttcattcatcgata |
48453076 |
T |
|
| Q |
201 |
taagtttatttgatttaactgacataac |
228 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
48453075 |
taagtttatttgatttaactgacataac |
48453048 |
T |
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