View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15871_high_15 (Length: 313)

Name: NF15871_high_15
Description: NF15871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15871_high_15
NF15871_high_15
[»] chr4 (15 HSPs)
chr4 (1-302)||(11847916-11848217)
chr4 (1-302)||(8045784-8046078)
chr4 (180-254)||(53483687-53483760)
chr4 (198-265)||(15408139-15408206)
chr4 (197-253)||(8834895-8834951)
chr4 (197-253)||(13888641-13888697)
chr4 (218-259)||(15747551-15747592)
chr4 (199-251)||(14486661-14486713)
chr4 (197-253)||(15245215-15245271)
chr4 (197-248)||(22724691-22724742)
chr4 (223-253)||(15069781-15069811)
chr4 (223-253)||(15076381-15076411)
chr4 (197-253)||(15308120-15308176)
chr4 (233-265)||(37837766-37837798)
chr4 (233-265)||(42596465-42596497)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-302)||(49989-50282)
[»] scaffold1773 (1 HSPs)
scaffold1773 (1-302)||(988-1281)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-302)||(11800-12097)
scaffold0026 (9-254)||(111504-111741)
[»] chr6 (26 HSPs)
chr6 (1-302)||(29614098-29614393)
chr6 (14-266)||(23057760-23058006)
chr6 (9-253)||(23839016-23839253)
chr6 (9-298)||(18800255-18800538)
chr6 (9-265)||(10986169-10986418)
chr6 (113-302)||(930047-930229)
chr6 (12-253)||(4477678-4477912)
chr6 (38-302)||(19785820-19786076)
chr6 (38-302)||(12168211-12168467)
chr6 (38-302)||(19878304-19878560)
chr6 (38-302)||(19287120-19287376)
chr6 (38-302)||(19884080-19884336)
chr6 (9-166)||(21565294-21565449)
chr6 (173-254)||(34639986-34640067)
chr6 (193-254)||(34646660-34646721)
chr6 (198-302)||(24512794-24512899)
chr6 (208-254)||(25469704-25469750)
chr6 (201-253)||(9187498-9187550)
chr6 (197-253)||(25348486-25348542)
chr6 (197-251)||(25598643-25598697)
chr6 (197-253)||(25397172-25397228)
chr6 (219-253)||(18659450-18659484)
chr6 (219-253)||(24441673-24441707)
chr6 (197-253)||(19471335-19471391)
chr6 (226-254)||(28288509-28288537)
chr6 (219-259)||(29415551-29415591)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-302)||(702-997)
[»] chr7 (27 HSPs)
chr7 (1-266)||(15167984-15168243)
chr7 (1-258)||(18873169-18873420)
chr7 (1-294)||(12709804-12710090)
chr7 (1-294)||(13122875-13123161)
chr7 (1-249)||(10895795-10896037)
chr7 (8-294)||(13743526-13743803)
chr7 (9-257)||(14422802-14423043)
chr7 (9-253)||(16009395-16009631)
chr7 (38-300)||(12590596-12590851)
chr7 (38-302)||(13007280-13007536)
chr7 (51-251)||(16677152-16677348)
chr7 (51-251)||(17651388-17651584)
chr7 (198-302)||(21230910-21231015)
chr7 (198-253)||(11382871-11382926)
chr7 (198-253)||(11389348-11389403)
chr7 (198-265)||(20311038-20311107)
chr7 (218-259)||(831628-831669)
chr7 (218-259)||(1196808-1196849)
chr7 (218-259)||(34958578-34958619)
chr7 (197-253)||(13679492-13679548)
chr7 (199-254)||(2971254-2971309)
chr7 (199-254)||(20906461-20906516)
chr7 (223-253)||(11311083-11311113)
chr7 (238-266)||(14129216-14129244)
chr7 (238-266)||(14136062-14136090)
chr7 (238-266)||(14433034-14433062)
chr7 (197-253)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (1-258)||(22750950-22751201)
chr5 (9-264)||(38144526-38144773)
chr5 (9-253)||(28370055-28370291)
chr5 (9-253)||(19512204-19512441)
chr5 (38-258)||(23528478-23528690)
chr5 (198-265)||(22438735-22438803)
chr5 (197-253)||(18407944-18408000)
chr5 (197-253)||(23111200-23111256)
chr5 (199-254)||(19236900-19236955)
chr5 (198-264)||(42961566-42961632)
chr5 (225-254)||(17021913-17021942)
chr5 (201-254)||(22461158-22461211)
chr5 (201-254)||(22467782-22467835)
[»] chr3 (20 HSPs)
chr3 (1-266)||(14762745-14763004)
chr3 (1-251)||(38310802-38311046)
chr3 (15-251)||(20247791-20248021)
chr3 (9-253)||(9534146-9534382)
chr3 (8-251)||(24192771-24193009)
chr3 (9-254)||(23370505-23370743)
chr3 (173-302)||(41455048-41455177)
chr3 (12-166)||(55499185-55499337)
chr3 (194-264)||(16801457-16801526)
chr3 (57-254)||(24933828-24934016)
chr3 (197-253)||(18929244-18929300)
chr3 (197-253)||(17240513-17240569)
chr3 (199-254)||(13302240-13302295)
chr3 (199-254)||(13323787-13323842)
chr3 (199-254)||(12033444-12033499)
chr3 (199-254)||(13312896-13312951)
chr3 (199-254)||(17131732-17131787)
chr3 (219-254)||(23392819-23392854)
chr3 (199-254)||(51301589-51301644)
chr3 (218-254)||(2247649-2247685)
[»] scaffold0029 (1 HSPs)
scaffold0029 (37-294)||(111726-111978)
[»] scaffold0117 (2 HSPs)
scaffold0117 (1-296)||(1856-2143)
scaffold0117 (1-296)||(8533-8820)
[»] chr8 (16 HSPs)
chr8 (1-294)||(23866423-23866709)
chr8 (1-251)||(8727735-8727979)
chr8 (9-254)||(44477441-44477678)
chr8 (9-254)||(44492599-44492836)
chr8 (9-156)||(27940946-27941091)
chr8 (38-302)||(17054439-17054694)
chr8 (197-266)||(18614271-18614340)
chr8 (197-253)||(23482053-23482109)
chr8 (198-265)||(14056552-14056619)
chr8 (197-253)||(39364919-39364975)
chr8 (198-265)||(25111976-25112043)
chr8 (199-266)||(29643373-29643440)
chr8 (199-254)||(24320670-24320725)
chr8 (198-264)||(27940841-27940907)
chr8 (197-253)||(21931696-21931752)
chr8 (233-265)||(44474690-44474722)
[»] scaffold0058 (1 HSPs)
scaffold0058 (8-302)||(109-394)
[»] scaffold0025 (1 HSPs)
scaffold0025 (8-251)||(14398-14635)
[»] chr2 (19 HSPs)
chr2 (9-266)||(19661441-19661690)
chr2 (9-253)||(6483536-6483772)
chr2 (9-253)||(6487003-6487239)
chr2 (51-302)||(26583687-26583931)
chr2 (9-166)||(23089137-23089292)
chr2 (9-166)||(23101545-23101700)
chr2 (9-167)||(23878826-23878982)
chr2 (180-254)||(5706023-5706096)
chr2 (197-253)||(21908358-21908414)
chr2 (197-253)||(23265141-23265197)
chr2 (197-253)||(23280209-23280265)
chr2 (197-253)||(24661576-24661632)
chr2 (199-254)||(10577-10632)
chr2 (199-254)||(25180929-25180984)
chr2 (193-251)||(23879002-23879060)
chr2 (193-253)||(23101463-23101524)
chr2 (182-263)||(26885166-26885246)
chr2 (201-265)||(23168287-23168351)
chr2 (201-265)||(23579544-23579608)
[»] chr1 (18 HSPs)
chr1 (9-253)||(20437024-20437261)
chr1 (173-302)||(41112010-41112139)
chr1 (197-266)||(32651571-32651640)
chr1 (197-253)||(18712798-18712854)
chr1 (198-253)||(19663517-19663572)
chr1 (197-253)||(20805320-20805376)
chr1 (198-253)||(11158093-11158148)
chr1 (197-251)||(10811785-10811839)
chr1 (199-254)||(20851132-20851187)
chr1 (199-254)||(20857759-20857814)
chr1 (199-254)||(21706276-21706331)
chr1 (199-254)||(21710818-21710873)
chr1 (223-253)||(24476350-24476380)
chr1 (223-253)||(25091418-25091448)
chr1 (219-252)||(18271338-18271371)
chr1 (219-252)||(18275992-18276025)
chr1 (233-265)||(11946472-11946504)
chr1 (238-266)||(21665177-21665205)
[»] scaffold0247 (1 HSPs)
scaffold0247 (9-302)||(11159-11446)
[»] scaffold0553 (1 HSPs)
scaffold0553 (9-254)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (9-254)||(1525-1763)
[»] scaffold0090 (1 HSPs)
scaffold0090 (8-264)||(17985-18235)
[»] scaffold0634 (1 HSPs)
scaffold0634 (1-88)||(3471-3558)
[»] scaffold0154 (1 HSPs)
scaffold0154 (179-302)||(30838-30962)
[»] scaffold0476 (1 HSPs)
scaffold0476 (9-166)||(3375-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (9-166)||(3704-3859)
[»] scaffold0796 (2 HSPs)
scaffold0796 (57-259)||(1727-1920)
scaffold0796 (57-259)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (8-92)||(806-889)
scaffold0456 (8-92)||(7951-8034)
scaffold0456 (183-258)||(916-991)
scaffold0456 (183-258)||(8061-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (180-260)||(45268-45347)
[»] scaffold0107 (1 HSPs)
scaffold0107 (198-302)||(40482-40587)
[»] scaffold2054 (1 HSPs)
scaffold2054 (201-295)||(717-810)
[»] scaffold0019 (1 HSPs)
scaffold0019 (198-302)||(135473-135578)
[»] scaffold0310 (1 HSPs)
scaffold0310 (198-265)||(17643-17711)
[»] scaffold0235 (1 HSPs)
scaffold0235 (200-302)||(22543-22646)
[»] scaffold0020 (1 HSPs)
scaffold0020 (197-253)||(101928-101984)
[»] scaffold0004 (2 HSPs)
scaffold0004 (197-266)||(116895-116964)
scaffold0004 (219-252)||(60441-60474)
[»] scaffold0222 (1 HSPs)
scaffold0222 (197-253)||(16819-16875)
[»] scaffold0461 (1 HSPs)
scaffold0461 (197-253)||(8-64)
[»] scaffold0146 (1 HSPs)
scaffold0146 (197-253)||(13631-13687)
[»] scaffold0815 (1 HSPs)
scaffold0815 (202-265)||(1453-1516)
[»] scaffold0124 (1 HSPs)
scaffold0124 (198-253)||(34276-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (197-253)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (225-264)||(5480-5519)
[»] scaffold0139 (1 HSPs)
scaffold0139 (198-253)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (182-263)||(493019-493099)
[»] scaffold0317 (1 HSPs)
scaffold0317 (197-253)||(1385-1441)
[»] scaffold0096 (1 HSPs)
scaffold0096 (197-257)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (199-254)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (199-254)||(10239-10294)
[»] scaffold1318 (1 HSPs)
scaffold1318 (199-253)||(1913-1967)
[»] scaffold0261 (1 HSPs)
scaffold0261 (199-265)||(23558-23624)
[»] scaffold0067 (1 HSPs)
scaffold0067 (239-295)||(46689-46746)
[»] scaffold1128 (1 HSPs)
scaffold1128 (233-265)||(529-561)
[»] scaffold0335 (1 HSPs)
scaffold0335 (197-253)||(2628-2684)


Alignment Details
Target: chr4 (Bit Score: 294; Significance: 1e-165; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 11847916 - 11848217
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11847916 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 11848015  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11848016 aaaaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattgattttaatttttcaaaactatgccactaggtcaa 11848115  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctct 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848116 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctct 11848215  T
Q  301 ct 302  Q
    ||    
T  11848216 ct 11848217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 8046078 - 8045784
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  8046078 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaaggattaagttttcattctgaacattatattac 8045979  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||| ||| ||||||||| | |||||||||  || ||||||||||||||||||||||      |||| ||||||||||| | ||||||||    
T  8045978 aagagaattaacattatctttacccatttcccttcagaattctcgtcaaaccctaaccctcaattta------ttttccaaaactatgcaattaggtcaa 8045885  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctct 300  Q
     |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||    
T  8045884 -tttcagaaattatagattatgattatcgagagatagtctcacccttaccttagttttgcagaaaataagacagcaaggatcggttctaggctctcatct 8045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 53483687 - 53483760
Alignment:
Q  180 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    |||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53483687 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttag 53483760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 15408139 - 15408206
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| | ||||||||    
T  15408139 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatctgcagaaa 15408206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 8834895 - 8834951
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  8834895 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 8834951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 13888641 - 13888697
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  13888641 tcaattttcagaaattatacattatgatcattgagagttagcctcacccttacctta 13888697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 15747592 - 15747551
Alignment:
Q  218 ttatgattattgagagatagtctcacccttaccttagttttg 259  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  15747592 ttataattattgagagttagtctcacccttaccttagttttg 15747551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 14486661 - 14486713
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttacct 251  Q
    ||||||||| ||||||| |||||||| |||||  |||||||||||||||||||    
T  14486661 aattttcagaaattatatattatgatcattgaaggatagtctcacccttacct 14486713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15245215 - 15245271
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||| ||| |||||||| ||| |||||||||||||||    
T  15245215 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttacctta 15245271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 248
Target Start/End: Complemental strand, 22724742 - 22724691
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcaccctta 248  Q
    ||||||||||| |||| || | ||| ||||||||||||||||||||||||||    
T  22724742 tcaattttcagaaattctatactattattattgagagatagtctcaccctta 22724691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 15069781 - 15069811
Alignment:
Q  223 attattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||    
T  15069781 attattgagagatagtctcacccttacctta 15069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 15076381 - 15076411
Alignment:
Q  223 attattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||    
T  15076381 attattgagagatagtctcacccttacctta 15076411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15308120 - 15308176
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||| ||| |||||||| ||| |||||||||| ||||    
T  15308120 tcaattttcagaaattatatattacgatcattgagagttagcctcacccttaactta 15308176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 37837798 - 37837766
Alignment:
Q  233 gatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||||||||||||||||| |||||||||||    
T  37837798 gatagtctcacccttaccttaattttgcagaaa 37837766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 42596497 - 42596465
Alignment:
Q  233 gatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||||||||||||||||| |||||||||||    
T  42596497 gatagtctcacccttaccttaattttgcagaaa 42596465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 49989 - 50282
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  49989 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 50087  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | ||||||||    
T  50088 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaa 50181  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctct 300  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  50182 -tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcataaaattagacagcaaggatcggttctaggctctcctct 50280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 988 - 1281
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  988 tacacaaattcatcaattcatccaatcactcataaatttcaatcaatttatgatcacagcaacaacaa-gattaagttttcattctgaacattatattac 1086  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | ||||||||    
T  1087 aagagaattaacatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaa 1180  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctct 300  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||    
T  1181 -tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaaaaaataagacagcaaggatcggttctaggctctcctct 1279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 12097 - 11800
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  12097 tacacaaattcatcaattcatccaatcactcataaatttcaatcaacttatgatcacagcaacaacaaagattaagttttcattctgaagattatattac 11998  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||| |||||||||      |||| ||||||||||| | ||||||||    
T  11997 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaactctcaattta------ttttccaaaactatgcaattaggtcaa 11904  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcgg-ttctaggctctcct 298  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||||||||    
T  11903 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagattatactgcatgaatcggtttctaggctctcct 11804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 111504 - 111741
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  111504 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 111602  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  111603 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 111695  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  111696 aattatagattatgattattgagagatagtctcacccttaccttag 111741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 29614393 - 29614098
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||  || |     
T  29614393 tacacaaattcatcaattcatccaatcattcataaatttcaatcaagttatgatcacagcaacaacaaagattaagttttcattctaaacattcaat-ac 29614295  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||     | ||||| ||||| ||||||||||    
T  29614294 aagagaattaacatgatcattacccatttcccttcataatcatcatcaaaccctaaccctcaatttatttt-----tccaaaattatgcaactaggtcaa 29614200  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctct 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  29614199 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttcaaggttctactct 29614100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 14 - 266
Target Start/End: Original strand, 23057760 - 23058006
Alignment:
Q  14 caattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaaca 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  23057760 caattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaaca 23057859  T
Q  114 tgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaatta 213  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | |||||||||||||||||||||    
T  23057860 tgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcaggaatta 23057953  T
Q  214 tagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  23057954 tagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 23058006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 23839016 - 23839253
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||| || || ||    
T  23839016 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 23839114  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaa-actatgccactaggtcaattttcag 207  Q
    ||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||||||      || || |||| ||||||| | |||||||||||||||    
T  23839115 taacatgatcaatacccattcccctt-agaatcatcatcaaaccctaaccctcaattt------atcttccaaacactatgcaattaggtcaattttcag 23839207  T
Q  208 gaattatagattatgattattgagagatagtctcacccttacctta 253  Q
     |||||||||||||||||||||||||||||||||||||||||||||    
T  23839208 aaattatagattatgattattgagagatagtctcacccttacctta 23839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 9 - 298
Target Start/End: Original strand, 18800255 - 18800538
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| | ||| |||||||||||||| |||||||| |||||| | |||||||| ||||||| ||||||| | |||| || || ||    
T  18800255 ttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacaacaacaatatagattaagatttcattttgaacatcacattacaacagaat 18800353  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||||||     ||  ||||| |||||||| || | |||||||||||||||     
T  18800354 taacatgatcattactcattcc-ctccagaatcatcatcaaaccctaaccctcaa-----ttctattttccaaaactaagcaattaggtcaattttcaga 18800447  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagcaagaatcggtt-ctaggctctcct 298  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||| ||||||| |||||||| ||||||||||||    
T  18800448 aattatagattatgattattgagagatagtctcacccttacattagttttgcagaaggattacacagcaa-aatcggttcctaggctctcct 18800538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 265
Target Start/End: Complemental strand, 10986418 - 10986169
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||| || || ||    
T  10986418 ttcatcaattcatccaatcaatcgtaattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacagaat 10986320  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||| ||     
T  10986319 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaatttttaga 10986226  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    |||||||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  10986225 aattatagattatgattattgaaagatagtctcacccttaccttagaattgcagaaa 10986169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 113 - 302
Target Start/End: Complemental strand, 930229 - 930047
Alignment:
Q  113 atgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaatt 212  Q
    |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||      |||||||||| | | ||||||||||||||| || |    
T  930229 atgatcattacccattcc-cttcagaaacatcatcaaaccctaaccctcaatttatttt------tcaaaactatacaattaggtcaattttcagaaact 930137  T
Q  213 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctctct 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  930136 atagattatgattattgagagatagtctcacccttaccttagttttgcagaaaataagacagcaaggatcggttctaggctctcctctct 930047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 12 - 253
Target Start/End: Original strand, 4477678 - 4477912
Alignment:
Q  12 atcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaa 111  Q
    ||||| ||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||||     
T  4477678 atcaaatcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaattag 4477776  T
Q  112 catgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaat 211  Q
    |||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | ||||||||||||||| |||    
T  4477777 catgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcagaaat 4477870  T
Q  212 tatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4477871 tatagattatgattattgagagatagtctcacccttacctta 4477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 302
Target Start/End: Complemental strand, 19786076 - 19785820
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19786076 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19785980  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  ||| ||||||||       ||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||||    
T  19785979 gaatcatcatcaaaccctaactttcattttattttc------caaaactattcaactaggtcaattt-cagaaattatagattatgattattgagagata 19785887  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  19785886 gtctcacccttaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 19785820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 38 - 302
Target Start/End: Original strand, 12168211 - 12168467
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  12168211 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 12168307  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  12168308 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 12168400  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  12168401 gtctcacccttaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 12168467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 38 - 302
Target Start/End: Original strand, 19878304 - 19878560
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19878304 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19878400  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  19878401 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 19878493  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  19878494 gtctcacccttaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 19878560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 302
Target Start/End: Original strand, 19287120 - 19287376
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19287120 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19287216  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  19287217 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 19287309  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 302  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  19287310 gtctcacccttaccttagttttgcagaaaattagacaacaaggatcgatttctaggctctcctctct 19287376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 302
Target Start/End: Original strand, 19884080 - 19884336
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  19884080 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 19884176  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  19884177 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 19884269  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 302  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  19884270 gtctcaccctaaccttagttttgcagaaaattagacagcaaggatcgatttctaggctctcctctct 19884336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 21565449 - 21565294
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | | |||| || |  ||    
T  21565449 ttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 21565351  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 166  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  21565350 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattt 21565294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 34640067 - 34639986
Alignment:
Q  173 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||| ||||||||| | | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34640067 attttccaaaactattcaattaggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34639986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 34646721 - 34646660
Alignment:
Q  193 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  34646721 taggtcaattttcagaaattatagattaagattattgagagatagtctcacccttaccttag 34646660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 302
Target Start/End: Complemental strand, 24512899 - 24512794
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctct 295  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||| |||||||||| |||  ||||||| |||||||| |||||||||    
T  24512899 caattttcagaaattatatactatgattattgagagatagtctcaccctcaccttagatttgcagaaagattgcacagcaa-aatcggttcctaggctct 24512801  T
Q  296 cctctct 302  Q
     ||||||    
T  24512800 tctctct 24512794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 25469750 - 25469704
Alignment:
Q  208 gaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25469750 gaattatagattatgattattgagagatagtctcacccttaccttag 25469704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 9187498 - 9187550
Alignment:
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  9187498 ttttcagaaattatgtattaagattattgagagatagtctcacccttacctta 9187550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 25348486 - 25348542
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||||    
T  25348486 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 25348542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 25598643 - 25598697
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 251  Q
    ||||||||||| || |||| |||||||| |||||||| |||||||||||||||||    
T  25598643 tcaattttcagaaaatatatattatgatcattgagagttagtctcacccttacct 25598697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 25397172 - 25397228
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  25397172 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 25397228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 18659450 - 18659484
Alignment:
Q  219 tatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||||||| |||||||||||||||||||    
T  18659450 tatgattattgagagttagtctcacccttacctta 18659484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 253
Target Start/End: Original strand, 24441673 - 24441707
Alignment:
Q  219 tatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||||||| |||||||||||||||||||    
T  24441673 tatgattattgagagttagtctcacccttacctta 24441707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 19471391 - 19471335
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||| ||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  19471391 tcaatttccagaaattatatattatgatcatcgagaggtagcctcacccttacctta 19471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 254
Target Start/End: Complemental strand, 28288537 - 28288509
Alignment:
Q  226 attgagagatagtctcacccttaccttag 254  Q
    |||||||||||||||||||||||||||||    
T  28288537 attgagagatagtctcacccttaccttag 28288509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 29415591 - 29415551
Alignment:
Q  219 tatgattattgagagatagtctcacccttaccttagttttg 259  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  29415591 tatgattattgagagttagcctcactcttaccttagttttg 29415551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 302
Target Start/End: Complemental strand, 997 - 702
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||||||| || |||||||||||||||     
T  997 tacacaaattcatcaattcatccaatcactcataaatttcaatcagtttatgatcacatcaacaacaa-gattaagtttttatcctgaacattatattac 899  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||| ||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||     |||   |||||||||| | ||||||||    
T  898 aagagtattatcatgatcattacccatttcccttcataatcctcatcaaaccctaaccctcaatttat-----tttccaaaaactatgcaattaggtcaa 804  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctct 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| ||||    
T  803 ttttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaataagacagcaaggatcggttctagactcttctct 704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 5e-99; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 15167984 - 15168243
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  15167984 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 15168083  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||||    
T  15168084 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaa 15168177  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  15168178 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 15168243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 18873169 - 18873420
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  18873169 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 18873268  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||||    
T  18873269 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaa 18873362  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 258  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  18873363 ttttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 18873420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 12710090 - 12709804
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  12710090 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 12709992  T
Q  100 taag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 198  Q
     ||  || |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||      |||| ||||||||||| | ||||||    
T  12709991 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta------ttttccaaaactatgcaattaggtc 12709898  T
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 294  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12709897 aa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaagaatcggttctaggctc 12709804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 13123161 - 13122875
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  13123161 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcacagcaacaacaa-gattaagtttatattctgaacattatatta 13123063  T
Q  100 taag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 198  Q
     ||  || |||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||      |||| ||||||||||| | ||||||    
T  13123062 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattta------ttttccaaaactatgcaattaggtc 13122969  T
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 294  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  13122968 aa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctc 13122875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 10896037 - 10895795
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  10896037 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 10895938  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| ||||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | ||||||||    
T  10895937 aagagaattaacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaa 10895844  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttac 249  Q
    ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  10895843 ttttcaaaaattatagattatgattattgagagatagtctcacccttac 10895795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 8 - 294
Target Start/End: Original strand, 13743526 - 13743803
Alignment:
Q  8 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagagga 107  Q
    ||||||||||| |||||| ||  |||||||| ||| ||||||||||||||||||| |||| ||||||||| |||| ||||||||  ||| || ||||  |    
T  13743526 attcatcaatttatccaaccaagcataattt-caaccaatttatgatcacagcaataacatagattaagtcttcaatctgaacagcataatacaagaaaa 13743624  T
Q  108 ttaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcag 207  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||       ||||||||||| | ||||||||||| |||    
T  13743625 ttaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattt-cag 13743717  T
Q  208 gaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 294  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  13743718 gaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctc 13743803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 9 - 257
Target Start/End: Original strand, 14422802 - 14423043
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||    
T  14422802 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 14422900  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||     
T  14422901 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 14422994  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttagttt 257  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14422995 aattatagattatgattattgagagatagtctcacccttaccttagttt 14423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 16009395 - 16009631
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  16009395 ttcatcaattcatccaatcaatcataattt-caatcagtttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 16009493  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| |||||||||| |||||| ||||||      || || |||||| |||| | |||||||||||||||     
T  16009494 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccttaacccacaattt------atcttccaaaaccatgcaattaggtcaattttcaga 16009586  T
Q  209 aattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  16009587 aattatagattatgattattgagagatagtctcacccttacctta 16009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 38 - 300
Target Start/End: Complemental strand, 12590851 - 12590596
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| ||||||||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  12590851 ttcaatcaattaatggattacagcaacaacatggattaagctttcattcttaacattaaattccaagaaaactaacatcatctttactcattcca--tca 12590754  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||   ||||   ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  12590753 gaatcatcatcaaaccctaactttca---tatt---attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 12590661  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctct 300  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||    
T  12590660 gtctcacccttaccttagttttgcagaaaattagacaacaaggatcgatttctaggctctcctct 12590596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 38 - 302
Target Start/End: Original strand, 13007280 - 13007536
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  13007280 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 13007376  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  13007377 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 13007469  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 302  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  13007470 gtctcacccttaccttagttttgcagaaaattagacaacaaggatcgatttctaggctctcctctct 13007536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 51 - 251
Target Start/End: Original strand, 16677152 - 16677348
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||| |  ||||| ||| |||| ||||||||    
T  16677152 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 16677251  T
Q  151 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 250  Q
    |||||||||| |||||    ||  ||   |||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  16677252 ccctaacccttaattt----tatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 16677347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 51 - 251
Target Start/End: Original strand, 17651388 - 17651584
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||| |  ||||| ||| |||| ||||||||    
T  17651388 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattacaccatcctcctcaaaatcatcatcaaa 17651487  T
Q  151 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 250  Q
    |||||||||| |||||    ||  ||   |||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  17651488 ccctaacccttaattt----tatcttccaaaaactatgcaattaggtcaatttttagaaattatagattatgattattgagagatagtctcacccttacc 17651583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 302
Target Start/End: Complemental strand, 21231015 - 21230910
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctct 295  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||| |||||||| |||||||||    
T  21231015 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaa-aatcggttcctaggctct 21230917  T
Q  296 cctctct 302  Q
     ||||||    
T  21230916 tctctct 21230910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 11382926 - 11382871
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11382926 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11382871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 11389403 - 11389348
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  11389403 caattttcagaaattatatattatgattattgagagatagtctcacccttacctta 11389348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 20311107 - 20311038
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag--ttttgcagaaa 265  Q
    |||||||||| |||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||    
T  20311107 caattttcagaaattatacgttatgattattgagagatagtctcacccttaccttagatttttgcagaaa 20311038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 831669 - 831628
Alignment:
Q  218 ttatgattattgagagatagtctcacccttaccttagttttg 259  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  831669 ttataattattgagagttagtctcacccttaccttagttttg 831628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 1196849 - 1196808
Alignment:
Q  218 ttatgattattgagagatagtctcacccttaccttagttttg 259  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  1196849 ttataattattgagagttagtctcacccttaccttagttttg 1196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 34958578 - 34958619
Alignment:
Q  218 ttatgattattgagagatagtctcacccttaccttagttttg 259  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  34958578 ttataattattgagagttagtctcacccttaccttagttttg 34958619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 13679492 - 13679548
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||  ||||||| || ||||| ||||| ||||||||||||||||||||||    
T  13679492 tcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 13679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 2971254 - 2971309
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  2971254 aattttcagaaattataaattatgactattgaaagataatcccacccttaccttag 2971309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 20906516 - 20906461
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20906516 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20906461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 11311083 - 11311113
Alignment:
Q  223 attattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||    
T  11311083 attattgagagatagtctcacccttacctta 11311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 266
Target Start/End: Original strand, 14129216 - 14129244
Alignment:
Q  238 tctcacccttaccttagttttgcagaaaa 266  Q
    |||||||||||||||||||||||||||||    
T  14129216 tctcacccttaccttagttttgcagaaaa 14129244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 266
Target Start/End: Original strand, 14136062 - 14136090
Alignment:
Q  238 tctcacccttaccttagttttgcagaaaa 266  Q
    |||||||||||||||||||||||||||||    
T  14136062 tctcacccttaccttagttttgcagaaaa 14136090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 266
Target Start/End: Original strand, 14433034 - 14433062
Alignment:
Q  238 tctcacccttaccttagttttgcagaaaa 266  Q
    |||||||||||||||||||||||||||||    
T  14433034 tctcacccttaccttagttttgcagaaaa 14433062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 46625961 - 46626017
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||| | ||||||| ||||| || |||||||| |||||||||||||| ||||    
T  46625961 tcaattttccgaaattatatattataatcattgagagttagtctcacccttatctta 46626017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 5e-99; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 22750950 - 22751201
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  22750950 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 22751049  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||||    
T  22751050 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaa 22751143  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 258  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  22751144 ttttcagaaattatagattatgattatcgagagaaagtctcacccttaccttagtttt 22751201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 9 - 264
Target Start/End: Complemental strand, 38144773 - 38144526
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  38144773 ttcatcaattcatccaatcaatcgtaattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaatagaat 38144675  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      ||||| ||||| ||||| | |||||||||||||||     
T  38144674 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt------attttccaaaattatgcaattaggtcaattttcaga 38144582  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38144581 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 38144526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 28370291 - 28370055
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  28370291 ttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 28370193  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  28370192 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 28370100  T
Q  209 aattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  28370099 aattatagattatgattattgagagatagtctcacccttacctta 28370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 19512204 - 19512441
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  19512204 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaatagaat 19512302  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||     
T  19512303 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 19512396  T
Q  209 aattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19512397 aattatagattatgattattgagagatagtctcacccttacctta 19512441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 258
Target Start/End: Original strand, 23528478 - 23528690
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  23528478 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaaaactaacatcatccttactcattcca--tca 23528575  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||    
T  23528576 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagata 23528668  T
Q  237 gtctcacccttaccttagtttt 258  Q
    ||||||||||||||||||||||    
T  23528669 gtctcacccttaccttagtttt 23528690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 22438803 - 22438735
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaa 265  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22438803 caattttcagaaattatacattatgattattgagagatagtctcacccttaccttagattttgcagaaa 22438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 18408000 - 18407944
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  18408000 tcaattttcagaaattatatattatgattattgagagatagtctcacccttacctta 18407944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 23111256 - 23111200
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23111256 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23111200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 19236900 - 19236955
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  19236900 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 19236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 42961566 - 42961632
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 264  Q
    |||||||||| ||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||    
T  42961566 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaa 42961632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 254
Target Start/End: Complemental strand, 17021942 - 17021913
Alignment:
Q  225 tattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||||||||||||||||||    
T  17021942 tattgagagatagtctcacccttaccttag 17021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 22461158 - 22461211
Alignment:
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22461158 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22461211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 22467782 - 22467835
Alignment:
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  22467782 ttttcagaaattatatattatgactattgaaagataatcccacccttaccttag 22467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 5e-99; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 14763004 - 14762745
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  14763004 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 14762905  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||||    
T  14762904 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaa 14762811  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| | ||||||    
T  14762810 ttttcagaaattatagattatgattatcgagagatagtctcacccttaccttaatttagaagaaaa 14762745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 38311046 - 38310802
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  38311046 tacacaaattcatccattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattac 38310947  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||||    
T  38310946 aagagaattaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaa 38310853  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttacct 251  Q
    | ||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  38310852 tattcagaaattatagattatgattatcgagagatagtctcacccttacct 38310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 20248021 - 20247791
Alignment:
Q  15 aattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacat 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  20248021 aattcatccaatcactcataattttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagaaaattaacat 20247922  T
Q  115 gatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattat 214  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||||      || || ||||||||||| | ||||||||||||||| ||||||    
T  20247921 gatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcagaaattat 20247828  T
Q  215 agattatgattattgagagatagtctcacccttacct 251  Q
    |||||||||||||||||||||||||||||||||||||    
T  20247827 agattatgattattgagagatagtctcacccttacct 20247791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 9534146 - 9534382
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||  |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  9534146 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacgacaacagtatagattaagttttcattctaaacattacattacaacagaat 9534244  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  9534245 taacatgatcaatacccattccac-tcagaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 9534337  T
Q  209 aattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  9534338 aattatagattatgattattgagagatagtctcacccttacctta 9534382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 24192771 - 24193009
Alignment:
Q  8 attcatcaattcatccaatcactcataattttcaatcaatttatgat-cacagcaacaacaaagattaagttttcattctgaacattatattataagagg 106  Q
    ||||||||||| ||||||||| ||||| |||||||||| |||||||| |||||||||| || |||||||||||||||||||||||| | |||| || ||     
T  24192771 attcatcaatttatccaatcaatcata-ttttcaatcagtttatgattcacagcaacagcatagattaagttttcattctgaacatcacattacaacaga 24192869  T
Q  107 attaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttca 206  Q
    |||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||      ||   |||||||||| | ||||||||||||||    
T  24192870 attaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttca 24192964  T
Q  207 ggaattatagattatgattattgagagatagtctcacccttacct 251  Q
    | |||||||||||||||||||||||||||||||||||||||||||    
T  24192965 gaaattatagattatgattattgagagatagtctcacccttacct 24193009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 23370743 - 23370505
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  23370743 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 23370645  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | |||||||||||||||     
T  23370644 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 23370551  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  23370550 aattatagattatgattattgagagatagtcccacccttaccttag 23370505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 173 - 302
Target Start/End: Complemental strand, 41455177 - 41455048
Alignment:
Q  173 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 272  Q
    ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41455177 attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaagttagac 41455079  T
Q  273 agcaagaatcg-gttctaggctctcctctct 302  Q
    | |||| ||||  ||||||||| ||||||||    
T  41455078 aacaaggatcgatttctaggctttcctctct 41455048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 55499337 - 55499185
Alignment:
Q  12 atcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaa 111  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||||   | |||||||| |||||||| |||||| | |||| || |  |||||    
T  55499337 atcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaactgtatagattaagatttcattccgaacatcacattacaacataattaa 55499239  T
Q  112 catgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 166  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  55499238 catgatcattacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt 55499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 16801526 - 16801457
Alignment:
Q  194 aggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 264  Q
    |||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  16801526 aggtcaattttcagaaattatatat-atgattattgagagatagtctcacccttaccttagttttgcagaa 16801457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 254
Target Start/End: Complemental strand, 24934016 - 24933828
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 156  Q
    |||||||||||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  24934016 cagcaacaacatggattaagctttcattcttaacattaaattccgagaaaactaacatcatctttactcattcca--tcagaatcatcatcaaaccctaa 24933919  T
Q  157 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
       |||   ||||   ||||| ||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24933918 ttttca---tatt---attttccaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttag 24933828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 18929244 - 18929300
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  18929244 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 18929300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 17240569 - 17240513
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  17240569 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 17240513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 13302295 - 13302240
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13302295 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 13323842 - 13323787
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13323842 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttag 13323787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 12033499 - 12033444
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  12033499 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 12033444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 13312951 - 13312896
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||  ||||| | |||||||||||||| ||||| |||||||||||||||||    
T  13312951 aattttcaaaaattacatattatgattattgaaagataatctcacccttaccttag 13312896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 17131732 - 17131787
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  17131732 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 17131787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 23392854 - 23392819
Alignment:
Q  219 tatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23392854 tatgattattgagagttagtctcacccttaccttag 23392819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 51301589 - 51301644
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||| | |||||||||||||  ||||| |||||||||||||||||    
T  51301589 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 51301644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 254
Target Start/End: Complemental strand, 2247685 - 2247649
Alignment:
Q  218 ttatgattattgagagatagtctcacccttaccttag 254  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  2247685 ttataattattgagagttagtctcacccttaccttag 2247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 37 - 294
Target Start/End: Original strand, 111726 - 111978
Alignment:
Q  37 tttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||    
T  111726 tttcaatcaatttatgatcacagcagcaacaaagattaagttttcattctgaacattatattacaagagaattaacatgatcattacccatttcccttca 111825  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa-ttttcaggaattatagattatgattattgagagat 235  Q
    ||||| ||||||||||||||||||||||||      || || ||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||    
T  111826 gaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaatttttcagaaattatagattatgattattgagagat 111919  T
Q  236 agtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 294  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  111920 agtctcacccttaccttagttttgcagaaaattagacagcaaggatcggttctaggctc 111978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 2143 - 1856
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||| ||||||||||| | |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||     
T  2143 tacacaaattcatcaattcatacaatcactcatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattatgaacattaaattac 2044  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||| ||||||||||||||  | ||| |||| ||||||||||||||||||||| ||      ||||| ||||||||| | | ||||||||    
T  2043 aagagaattaacataatcattacccattc--catcaaaatcatcatcaaaccctaaccctcaaatt------attttccaaaactatacaattaggtcaa 1952  T
Q  201 -ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctc 296  Q
     ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  1951 tttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctctc 1856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 8820 - 8533
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    ||||||||||||||||||||| |||||||| || | |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| ||||     
T  8820 tacacaaattcatcaattcatacaatcacttatcaatttcaatcaagttatgatcacagcaacaacaaggattaagttttcattttgaacattaaattac 8721  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    ||||| |||||||| ||||||||||||||  | ||| |||| ||||||||||||||||||||| ||      ||||| ||||||||| | | ||||||||    
T  8720 aagagaattaacataatcattacccattc--catcataatcatcatcaaaccctaaccctcaaatt------attttccaaaactatacaattaggtcaa 8629  T
Q  201 -ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctc 296  Q
     ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8628 tttttcagaaattatagattatgattattgagatatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctctc 8533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 7e-86; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 23866423 - 23866709
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaa-tcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatatta 99  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||| ||||||||||| ||||||||||  ||||||||||||||||||    
T  23866423 tacacaaattcatcaattcatccaatcactcataaattccaaatcagtttacgatcagagcaacaacaa-gattaagtttatattctgaacattatatta 23866521  T
Q  100 taag-aggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtc 198  Q
     ||  || |||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | ||||||    
T  23866522 caaatagaattaacatgatcattacccatttctcttcataatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtc 23866615  T
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctc 294  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23866616 aa-tttcaggaattataaattatgattattgagagatagtctcacccttaccttagttttgcag-aaattagacagcaaggatcggttctaggctc 23866709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 8727979 - 8727735
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||||||||| ||||     
T  8727979 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattac 8727880  T
Q  101 aagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaa 200  Q
    || || ||||||||||||| ||||||| || | |||||||| || |||||||||||||||||||||||      ||   |||||||||| | ||||||||    
T  8727879 aacagaattaacatgatcaatacccatacc-cctcagaatcatcgtcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaa 8727786  T
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttacct 251  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  8727785 ttttcagaaattatagattatgattattgagggataatctcacccttacct 8727735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 44477441 - 44477678
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  44477441 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44477539  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  44477540 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 44477632  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44477633 aattatagattatgattattgagagatagtctcacccttaccttag 44477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 254
Target Start/End: Original strand, 44492599 - 44492836
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  44492599 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 44492697  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  44492698 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 44492790  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44492791 aattatagattatgattattgagagatagtctcacccttaccttag 44492836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 27941091 - 27940946
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| | |||||  | ||||||| |||||||||||||||||| |||| || || ||    
T  27941091 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcataacaacagtatagattaaattttcattctgaacattacattacaacagaat 27940993  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 156  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||    
T  27940992 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaa 27940946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 302
Target Start/End: Original strand, 17054439 - 17054694
Alignment:
Q  38 ttcaatcaatttatg-atcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttca 136  Q
    ||||||||||| ||| || ||||||||||||  ||||||| |||| |||| ||||||| |||  ||||  | |||||| ||| |||| ||||||   |||    
T  17054439 ttcaatcaattcatggattacagcaacaacatggattaagatttcgttcttaacattaaattccaagaa-actaacatcatctttactcattcca--tca 17054535  T
Q  137 gaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagata 236  Q
    ||||| |||||||||||||||  |||  |||||||       ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||    
T  17054536 gaatcatcatcaaaccctaactttcatcttattttc------caaaactattcaattaggtcaattt-caggaattatagattatgattattgagagata 17054628  T
Q  237 gtctcacccttaccttagttttgcagaaaattagacagcaagaatcg-gttctaggctctcctctct 302  Q
    |||||||||||||||| ||||||||| ||||||||||||||  ||||  ||||||||||| ||||||    
T  17054629 gtctcacccttaccttggttttgcag-aaattagacagcaatgatcgatttctaggctctactctct 17054694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 18614271 - 18614340
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    ||||||||||| ||||||| || |||||||||||||||||||||||||||||||||| ||| | ||||||    
T  18614271 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttaccttaatttagaagaaaa 18614340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 23482109 - 23482053
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23482109 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23482053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 14056619 - 14056552
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    |||||||||| | ||| | | ||| |||||||||||||||||||||||||||||||| ||||||||||    
T  14056619 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgcagaaa 14056552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 39364919 - 39364975
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||||    
T  39364919 tcaattttcagaaattctatactattattattgagagatagtctcacccttacctta 39364975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 25111976 - 25112043
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    |||||||||| | ||| | | ||| |||||||||||||||||||||||||||||||| |||| |||||    
T  25111976 caattttcagaatttacatactattattattgagagatagtctcacccttaccttagatttgtagaaa 25112043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 29643440 - 29643373
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    ||||||||| ||||| | |||||||||||||| ||||| |||||||||||||||| ||| | ||||||    
T  29643440 aattttcagaaattacatattatgattattgaaagataatctcacccttaccttaatttagaagaaaa 29643373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 24320725 - 24320670
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  24320725 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 24320670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 27940907 - 27940841
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 264  Q
    |||||||||| ||| ||| ||||| || |||||  | ||| ||||||||||||||||||||||||||    
T  27940907 caattttcagaaatcatatattataatcattgaaggttagcctcacccttaccttagttttgcagaa 27940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 21931696 - 21931752
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| | ||||| ||||| || |||||||| ||| |||||||||||||||    
T  21931696 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 21931752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Complemental strand, 44474722 - 44474690
Alignment:
Q  233 gatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||||||||||||||||| |||||||||||    
T  44474722 gatagtctcacccttaccttaattttgcagaaa 44474690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 8 - 302
Target Start/End: Original strand, 109 - 394
Alignment:
Q  8 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagagga 107  Q
    ||||||||||| |||||| || ||||||||| ||| ||||||||||||||| ||| |||| ||||||||| |||| ||||||||  ||| || ||||  |    
T  109 attcatcaatttatccaaccaatcataattt-caaccaatttatgatcacatcaataacatagattaagtcttcaatctgaacaccataatacaagaaaa 207  T
Q  108 ttaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcag 207  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||       ||||||||||| | ||||||||||| |||    
T  208 ttaacatgatcattacccattcccct-cagaatcatcatcaaaccctaaccctcaatttattttc------caaaactatgcaattaggtcaattt-cag 299  T
Q  208 gaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctctcctctct 302  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  300 aaattatagattatggttattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaaggatcggttctaggctctcctctct 394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 14635 - 14398
Alignment:
Q  8 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagagga 107  Q
    ||||||||||| ||||||||| ||||| |||||||||| |||||||||||||||||| || ||||||||||||||||| |||||| | |||| || || |    
T  14635 attcatcaatttatccaatcaatcata-ttttcaatcagtttatgatcacagcaacagcatagattaagttttcattcggaacatcacattacaacagaa 14537  T
Q  108 ttaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcag 207  Q
    ||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||    
T  14536 ttaacatgatcattacccatttcccttcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcag 14442  T
Q  208 gaattatagattatgattattgagagatagtctcacccttacct 251  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  14441 aaattatagattatgattattgagagatagtctcacccttacct 14398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 266
Target Start/End: Complemental strand, 19661690 - 19661441
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||| ||||||| |||| || || ||    
T  19661690 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacaatatagattaagttttcattctaaacattacattacaacagaat 19661592  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||      || || ||||||||||| | |||||||||||||||     
T  19661591 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt------atcttccaaaactatgcaattaggtcaattttcaga 19661499  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| ||| | ||||||    
T  19661498 aattatagattatgattatcgagagaaagtctcacccttaccttaatttagaagaaaa 19661441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 6483536 - 6483772
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  6483536 ttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6483634  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  6483635 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 6483727  T
Q  209 aattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6483728 aattatagattatgattattgagagatagtctcacccttacctta 6483772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 253
Target Start/End: Original strand, 6487003 - 6487239
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| |||||||  ||| || || ||    
T  6487003 ttcatcaattcatcccatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacgttacaacagaat 6487101  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | ||| |||| ||||||||||||||||||||||||      ||||| ||||||||||| | |||||||||||||||     
T  6487102 taacatgatcaatacccattcc-cctcaaaatcatcatcaaaccctaaccctcaattt------attttccaaaactatgcaattaggtcaattttcaga 6487194  T
Q  209 aattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6487195 aattatagattatgattattgagagatagtctcacccttacctta 6487239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 51 - 302
Target Start/End: Original strand, 26583687 - 26583931
Alignment:
Q  51 tgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaa 150  Q
    ||||||||||||||  | |||||| |  |||||||||||||| |  ||| || |   |||||||||||||||||| |||| || ||||||| |||||||     
T  26583687 tgatcacagcaacattatagattaggaattcattctgaacatcactttacaacatatttaacatgatcattaccctttcccct-cagaatcatcatcaag 26583785  T
Q  151 ccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacc 250  Q
    |||||||||||||||||||||       ||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  26583786 ccctaaccctcaatttattttc------caaaactatgcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttacc 26583878  T
Q  251 ttagttttgcagaaaattagacagcaagaatcggttc-taggctctcctctct 302  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  26583879 ttagttttgcagaaaattagacagcaaggatcggttcttaggctctcctctct 26583931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 23089292 - 23089137
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||||||||||  | |||||||| |||||||| |||| | | |||| || |  ||    
T  23089292 ttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacagcaacagtatagattaagatttcattccgaacgtcacattacaacataat 23089194  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 166  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||    
T  23089193 taacatgatcattacccattcccctt-agaatcatcatcaaaccctaaccctcaattt 23089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 23101700 - 23101545
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    ||||| |||||||||||||| | ||| ||||||||||||||||||||||| |||||  | |||||||| |||||||| |||| | | |||| || |  ||    
T  23101700 ttcatgaattcatccaatcaattata-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacgtcacattacaacataat 23101602  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 166  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  23101601 taacatgatcattacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt 23101545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 167
Target Start/End: Original strand, 23878826 - 23878982
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| |  || ||||||||||||||||||||||| |||||  | |||||||| ||||||||||||||| | |||| || |  ||    
T  23878826 ttcatcaattcatccaatcaattcta-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattctgaacatcacattacaacataat 23878924  T
Q  109 taacatgatcatta-cccattcctcttcagaatcgtcatcaaaccctaaccctcaattta 167  Q
    |||||||||||||| |||||||| | |||||||| ||| | |||||||||||||||||||    
T  23878925 taacatgatcattaccccattcc-cctcagaatcatcaac-aaccctaaccctcaattta 23878982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 5706096 - 5706023
Alignment:
Q  180 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5706096 aaaactattcaattaggtcaattt-caggaattatagattatgattaatgagagatagtctcacccttaccttag 5706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 21908358 - 21908414
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||    
T  21908358 tcaattttcagaaattatatatcatgattattgagagatagtctcacccttacctta 21908414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 23265141 - 23265197
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23265141 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 23280209 - 23280265
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  23280209 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 23280265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 24661576 - 24661632
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||||||| || ||||| ||| |||||||||||||||    
T  24661576 tcaattttcagaaattatatattatgatcatcgagagttagcctcacccttacctta 24661632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 10577 - 10632
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  10577 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 25180984 - 25180929
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  25180984 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 25180929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 251
Target Start/End: Original strand, 23879002 - 23879060
Alignment:
Q  193 taggtcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 251  Q
    ||||||||||||  | ||||||| || || |||| ||||||||||||||||||||||||    
T  23879002 taggtcaatttttcgaaattatatataattattaatgagagatagtctcacccttacct 23879060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 23101524 - 23101463
Alignment:
Q  193 taggtcaattttcaggaattatagattatg-attattgagagatagtctcacccttacctta 253  Q
    ||||||||||||| | ||||| | |||||  |||| ||||||||||||||||||||||||||    
T  23101524 taggtcaattttccgaaattacatattatctattaatgagagatagtctcacccttacctta 23101463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 26885166 - 26885246
Alignment:
Q  182 aactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 263  Q
    |||||| ||| ||| | ||||||||| ||||||| |||| ||||||||| ||||| || ||||||||||||||  |||||||    
T  26885166 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatcccacccttaccttagaattgcaga 26885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 23168351 - 23168287
Alignment:
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||| ||||||| |||||||| | ||| ||||| || ||||||||||||||  |||||||||    
T  23168351 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23168287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 23579608 - 23579544
Alignment:
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||| ||||||| |||||||| | ||| ||||| || ||||||||||||||  |||||||||    
T  23579608 ttttcagaaattatacattatgatcaatgaaagataatcccacccttaccttagaattgcagaaa 23579544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 9 - 253
Target Start/End: Complemental strand, 20437261 - 20437024
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||||||||||| |||| || |  ||    
T  20437261 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctgaacattacattacaacataat 20437163  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||||||||||||      ||   |||||||||| | |||||||||||||||     
T  20437162 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaaccctcaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 20437069  T
Q  209 aattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20437068 aattatagattatgattattgagagatagtctcacccttacctta 20437024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 173 - 302
Target Start/End: Original strand, 41112010 - 41112139
Alignment:
Q  173 atttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 272  Q
    ||||||||||||||| | | ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41112010 atttttcaaaactattcaattaggtcaattt-cagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagac 41112108  T
Q  273 agcaagaatcg-gttctaggctctcctctct 302  Q
    |||||| ||||  ||||||||||||||||||    
T  41112109 agcaaggatcgatttctaggctctcctctct 41112139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 32651571 - 32651640
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  32651571 tcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 32651640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 18712798 - 18712854
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||| |||||||    
T  18712798 tcaattttcagaaattatatactatgattattgagagatagtctcacccatacctta 18712854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 19663572 - 19663517
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  19663572 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 19663517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 20805320 - 20805376
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  20805320 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 20805376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 11158093 - 11158148
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||| ||||||| |||| ||| |||||||| |||||||||||||||||||    
T  11158093 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 11158148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 10811839 - 10811785
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacct 251  Q
    ||||||||||| |||| || | ||| |||||||||||||||||||||||||||||    
T  10811839 tcaattttcagaaattctacactattattattgagagatagtctcacccttacct 10811785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 20851187 - 20851132
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20851187 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20851132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 20857814 - 20857759
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  20857814 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 20857759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 21706276 - 21706331
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21706276 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21706331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 21710818 - 21710873
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  21710818 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 21710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 253
Target Start/End: Original strand, 24476350 - 24476380
Alignment:
Q  223 attattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||    
T  24476350 attattgagagatagtctcacccttacctta 24476380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 253
Target Start/End: Complemental strand, 25091448 - 25091418
Alignment:
Q  223 attattgagagatagtctcacccttacctta 253  Q
    |||||||||||||||||||||||||||||||    
T  25091448 attattgagagatagtctcacccttacctta 25091418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 18271338 - 18271371
Alignment:
Q  219 tatgattattgagagatagtctcacccttacctt 252  Q
    ||||||||||||||| ||||||||||||||||||    
T  18271338 tatgattattgagagttagtctcacccttacctt 18271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 18275992 - 18276025
Alignment:
Q  219 tatgattattgagagatagtctcacccttacctt 252  Q
    ||||||||||||||| ||||||||||||||||||    
T  18275992 tatgattattgagagttagtctcacccttacctt 18276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 11946472 - 11946504
Alignment:
Q  233 gatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||||||||||||||||| |||||||||||    
T  11946472 gatagtctcacccttaccttaattttgcagaaa 11946504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 266
Target Start/End: Original strand, 21665177 - 21665205
Alignment:
Q  238 tctcacccttaccttagttttgcagaaaa 266  Q
    |||||||||||||||||||||||||||||    
T  21665177 tctcacccttaccttagttttgcagaaaa 21665205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 9 - 302
Target Start/End: Original strand, 11159 - 11446
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||  |  ||||||| ||||||| ||||||| | |||| || || ||    
T  11159 ttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacagcaacagtatggattaagatttcattttgaacatcacattacaacagaat 11257  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||||||| |||||| || ||||||| |||||||||||||||||||||||       ||||| |||||||| || | |||||||||||||||     
T  11258 taacatgatcattactcattcc-ctccagaatcatcatcaaaccctaaccctcaattct-----attttccaaaactaagcaattaggtcaattttcaga 11351  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagcaagaatcggtt-ctaggctctcctctct 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| |||||||| ||||||||| ||||||    
T  11352 aattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaa-aatcggttcctaggctcttctctct 11446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 10433 - 10195
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  10433 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 10335  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | |||||||||||||||     
T  10334 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 10241  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  10240 aattatagattatgattattgagagatagtcccacccttaccttag 10195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 254
Target Start/End: Complemental strand, 1763 - 1525
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||||||| |||| || || ||    
T  1763 ttcatcaattcatccaatcaatcataattt-caatcaatttatgatcacaacaacagtatagattaagttttcattctaaacattacattacaacagaat 1665  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttcagg 208  Q
    ||||||||||| |||||||||| | |||||||| ||||||||||||||||| ||||||||      ||   |||||||||| | |||||||||||||||     
T  1664 taacatgatcaatacccattcc-cctcagaatcatcatcaaaccctaacccacaatttat-----cttccaaaaactatgcaattaggtcaattttcaga 1571  T
Q  209 aattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||    
T  1570 aattatagattatgattattgagagatagtcccacccttaccttag 1525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 17985 - 18235
Alignment:
Q  8 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataag-agg 106  Q
    ||||||||||| ||||||||| ||  ||||| ||||||||| |||||||||||||||||| || |||||||||||||||| |||| | |||| ||  ||     
T  17985 attcatcaatttatccaatcaatccaaattt-caatcaattcatgatcacagcaacaacataggttaagttttcattctggacatcacattacaaacaga 18083  T
Q  107 attaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaatttattttaatttttcaaaactatgccactaggtcaattttca 206  Q
    |||||||||| |||||||  ||||  || |||||| |||| ||||| ||||||||||||||||||  |     ||| ||| || | ||||||||||||||    
T  18084 attaacatgaccattaccatttcccgtt-agaatcatcattaaaccttaaccctcaatttattttcct-----aaagctaagcaattaggtcaattttca 18177  T
Q  207 ggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 264  Q
      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18178 aaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa 18235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 3471 - 3558
Alignment:
Q  1 tacacaaattcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 88  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3471 tacacaaattcatcaattcatccaatcacccataaatttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctga 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 179 - 302
Target Start/End: Original strand, 30838 - 30962
Alignment:
Q  179 caaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaa-aattagacagcaa 277  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||    
T  30838 caaaactatgcaattaggtcaattttcagaaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaggattacacagcaa 30937  T
Q  278 gaatcggtt-ctaggctctcctctct 302  Q
     ||||| || ||||||||||||||||    
T  30938 -aatcgattcctaggctctcctctct 30962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 3531 - 3375
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||  | |||||||| ||||||||||||||| | |||| || |  ||    
T  3531 ttcatcaattcatccaatcaattata-ttttcaatcaatttgtgatcacagcaacagtatagattaagatttcattctgaacatcacattacaacaaaat 3433  T
Q  109 taacatga-tcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 166  Q
    |||||||| |||||||||||||| | |||||||| ||||||||||||||||||||||||    
T  3432 taacatgattcattacccattcc-cctcagaatcatcatcaaaccctaaccctcaattt 3375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 9 - 166
Target Start/End: Complemental strand, 3859 - 3704
Alignment:
Q  9 ttcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacattatattataagaggat 108  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||  | |||||||| |||||||| |||||| | |||| || |  ||    
T  3859 ttcatcaattcatccaatcaattata-ttttcaatcaatttatgatcacaacaacagtatagattaagatttcattccgaacatcacattacaacataat 3761  T
Q  109 taacatgatcattacccattcctcttcagaatcgtcatcaaaccctaaccctcaattt 166  Q
    |||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||    
T  3760 taacatgatcattaccca-tccccctcagaatcatcatcaaaccctaaccctcaattt 3704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 259
Target Start/End: Complemental strand, 1920 - 1727
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 156  Q
    |||||||| ||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  1920 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca--tcagaatcatcatcaaaccctaa 1823  T
Q  157 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtt 256  Q
    |  |||   ||||   ||||| ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1822 ctttca---tatt---attttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtt 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 259
Target Start/End: Complemental strand, 5943 - 5750
Alignment:
Q  57 cagcaacaacaaagattaagttttcattctgaacattatattataagaggattaacatgatcattacccattcctcttcagaatcgtcatcaaaccctaa 156  Q
    |||||||| ||  ||||||| ||||||||| ||||||| |||   |||  | |||||| ||| |||| ||||||   |||||||| ||||||||||||||    
T  5943 cagcaacagcatggattaagctttcattcttaacattaaattccgagaaaactaacatcatccttactcattcca--tcagaatcatcatcaaaccctaa 5846  T
Q  157 ccctcaatttattttaatttttcaaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtt 256  Q
    |  |||   ||||   ||||| ||||||||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5845 ctttca---tatt---attttccaaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagtt 5753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 806 - 889
Alignment:
Q  8 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacat 92  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  806 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacat 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 7951 - 8034
Alignment:
Q  8 attcatcaattcatccaatcactcataattttcaatcaatttatgatcacagcaacaacaaagattaagttttcattctgaacat 92  Q
    ||||||||||| |||||||| |||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7951 attcatcaatttatccaatccctcataattc-caatcaatttatgatcacagcaacaacacagattaagttttcattctgaacat 8034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 916 - 991
Alignment:
Q  183 actatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 258  Q
    ||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  916 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 8061 - 8136
Alignment:
Q  183 actatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagtttt 258  Q
    ||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  8061 actatgcaattaggtcaattttcagaaactatagattatgattattgagagatagtctcacccttaccttagtttt 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 180 - 260
Target Start/End: Complemental strand, 45347 - 45268
Alignment:
Q  180 aaaactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgc 260  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  45347 aaaactattcaattaggtcaattt-caggaattatagattatgattattgagagatagtctcacccttaccttagatttgc 45268  T

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Target: scaffold0107 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 302
Target Start/End: Complemental strand, 40587 - 40482
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctct 295  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||| |||  ||||||| |||||||| |||||||||    
T  40587 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagatttgcagaaagattgcacagcaa-aatcggttcctaggctct 40489  T
Q  296 cctctct 302  Q
     ||||||    
T  40488 tctctct 40482  T

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Target: scaffold2054 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 717 - 810
Alignment:
Q  201 ttttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaattagacagcaagaatcggttctaggctct 295  Q
    ||||||| ||||||| |||| ||| ||||| ||||| || |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  717 ttttcagaaattatatattaagatcattgaaagataatcccacccttaccttagttttgcag-aaataagacagcaaggatcggttctaggctct 810  T

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Target: scaffold0019 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 302
Target Start/End: Original strand, 135473 - 135578
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggttc-taggctct 295  Q
    |||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||| |||  ||||||| ||||||||| ||||||||    
T  135473 caattttcagaaattatatactatgattattgagagatagtctcacccttaccttagattttcagaaagattgcacagcaa-aatcggttcttaggctct 135571  T
Q  296 cctctct 302  Q
     ||||||    
T  135572 tctctct 135578  T

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Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 17643 - 17711
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttaccttag-ttttgcagaaa 265  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  17643 caattttcagaaattatacattatggttattgagagatagtctcacccttaccttagattttgcagaaa 17711  T

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Target: scaffold0235 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 22646 - 22543
Alignment:
Q  200 attttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa-attagacagcaagaatcggtt-ctaggctctcc 297  Q
    |||||||| ||||||| | |||||||||||||||||||||||||||||||||| | |||||||||| |||  ||||||| |||||||| ||||||||| |    
T  22646 attttcagaaattatatactatgattattgagagatagtctcacccttaccttggatttgcagaaatattgcacagcaa-aatcggttcctaggctcttc 22548  T
Q  298 tctct 302  Q
    |||||    
T  22547 tctct 22543  T

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Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 101984 - 101928
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  101984 tcaattttcaggaattatatactatgattattgagagatagtctcacccttacctta 101928  T

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Target: scaffold0004 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 116895 - 116964
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaaa 266  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||| ||| | ||||||    
T  116895 tcaattttcagaaattatatactatgattattgagagatagtctcacccttaccttaatttagaagaaaa 116964  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 60441 - 60474
Alignment:
Q  219 tatgattattgagagatagtctcacccttacctt 252  Q
    ||||||||||||||| ||||||||||||||||||    
T  60441 tatgattattgagagttagtctcacccttacctt 60474  T

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Target: scaffold0222 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 16819 - 16875
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  16819 tcaattttcagaaattatatactatgattattgagagatagtctcacccttacctta 16875  T

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Target: scaffold0461 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 64 - 8
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  64 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 8  T

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Target: scaffold0146 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 13631 - 13687
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||    
T  13631 tcaattttcagaaattatgtattaagattattgagagatagtctcacccttacctta 13687  T

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Target: scaffold0815 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 1453 - 1516
Alignment:
Q  202 tttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    |||||| ||||||| |||| ||| |||||||| ||||||||||||||||||| |||||||||||    
T  1453 tttcagaaattatacattaagatcattgagagttagtctcacccttaccttaattttgcagaaa 1516  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 34331 - 34276
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||| ||||||| | ||||||||| |||||||||||||||||||||||||    
T  34331 caattttcagaaattatatactatgattatcgagagatagtctcacccttacctta 34276  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 12296 - 12352
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| ||||||| |||||||| |||||||| ||| |||||||||||||||    
T  12296 tcaattttcagaaattatatattatgatcattgagagttagcctcacccttacctta 12352  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 5480 - 5519
Alignment:
Q  225 tattgagagatagtctcacccttaccttagttttgcagaa 264  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  5480 tattgaaagatagtctcacccttaccttagttttgcagaa 5519  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 15052 - 14997
Alignment:
Q  198 caattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    |||||||||| ||||||| |||| ||| |||||||| |||||||||||||||||||    
T  15052 caattttcagaaattatatattaagatcattgagagttagtctcacccttacctta 14997  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 493099 - 493019
Alignment:
Q  182 aactatgccactaggtcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcaga 263  Q
    |||||| ||| ||| | ||||||||| ||||||| |||| ||||||||| ||||| |||||||||||||||||  |||||||    
T  493099 aactattccattagattaattttcagaaattatacatta-gattattgaaagataatctcacccttaccttagaattgcaga 493019  T

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Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 1385 - 1441
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||  ||||||| || ||||| ||||| ||||||||||||||||||||||    
T  1385 tcaattttcaaaaattatatatcatgatcattgaaagatagtctcacccttacctta 1441  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 39563 - 39503
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttt 257  Q
    ||||||||| | ||||||| |||||||| |||||||| ||| |||||||||||||| ||||    
T  39563 tcaattttctgaaattatatattatgatcattgagagttagcctcacccttacctttgttt 39503  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 9336 - 9391
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || ||||||||||||||    
T  9336 aattttcagaaattatatattatgactattgaaagataatcccacccttaccttag 9391  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 10239 - 10294
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttag 254  Q
    ||||||||| ||||| | |||||||||||||  ||||| |||||||||||||||||    
T  10239 aattttcagaaattacatattatgattattggaagataatctcacccttaccttag 10294  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 1967 - 1913
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||| ||||||| ||||||| |||||| ||||| || |||||||||||||    
T  1967 aattttcagaaattatatattatgactattgaaagataatcccacccttacctta 1913  T

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Target: scaffold0261 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 23624 - 23558
Alignment:
Q  199 aattttcaggaattatagattatgattattgagagatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||||| ||||||| |||||||| ||| | ||||| || ||||||||||||||  |||||||||    
T  23624 aattttcagaaattatacattatgatcattcaaagataatcccacccttaccttagaattgcagaaa 23558  T

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Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 46746 - 46689
Alignment:
Q  239 ctcacccttaccttagttttgcagaa-aattagacagcaagaatcggttctaggctct 295  Q
    |||||||||||||||||||||||||| || |  ||||||| ||||||| |||||||||    
T  46746 ctcacccttaccttagttttgcagaagaaatgcacagcaaaaatcggtcctaggctct 46689  T

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Target: scaffold1128 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 529 - 561
Alignment:
Q  233 gatagtctcacccttaccttagttttgcagaaa 265  Q
    ||||||||||||||||||||| |||||||||||    
T  529 gatagtctcacccttaccttaattttgcagaaa 561  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 2684 - 2628
Alignment:
Q  197 tcaattttcaggaattatagattatgattattgagagatagtctcacccttacctta 253  Q
    ||||||||||| | ||||| ||||| || |||||||| ||| |||||||||||||||    
T  2684 tcaattttcagaagttatatattataatcattgagagttagcctcacccttacctta 2628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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