View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15873_high_21 (Length: 289)
Name: NF15873_high_21
Description: NF15873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15873_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 26 - 273
Target Start/End: Complemental strand, 16758174 - 16757927
Alignment:
| Q |
26 |
gctcaaccgaacaacttatactactccatgtgggacttgggaacccaataatactcgtatgagttctcctttgatgcattgatgttcagatgactcagtg |
125 |
Q |
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| T |
16758174 |
gctcaaccaaacaacttatactactccatgtgggacttgggaaccccataatactcgtatgagttctcctttgatgcattgatgttcagatgactcggtg |
16758075 |
T |
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| Q |
126 |
gcaaaccaagttctagatcaatttttggcatactctttcatgaatcaactaactaacctattaccttgtgtcctcatatttcatttagcagagtcgatgc |
225 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16758074 |
gcaaaccaagttctagatcaatttttggcatactcttgcatgaatcaactaactaacctattaccttgtgtcctcatatttcatttagcagagtcgatgt |
16757975 |
T |
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| Q |
226 |
attttctaaattccatcgtcattgtcctcttttctccgtatggttcat |
273 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| |||||| |
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| T |
16757974 |
attttctaaattccatcgtcattgtcctcttttctccatattgttcat |
16757927 |
T |
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