View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15873_high_32 (Length: 235)

Name: NF15873_high_32
Description: NF15873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15873_high_32
NF15873_high_32
[»] chr7 (40 HSPs)
chr7 (61-213)||(33343015-33343168)
chr7 (60-213)||(46290037-46290191)
chr7 (61-213)||(34270292-34270441)
chr7 (61-169)||(33072052-33072161)
chr7 (62-202)||(8091311-8091453)
chr7 (80-202)||(28323173-28323295)
chr7 (58-157)||(4969856-4969956)
chr7 (59-213)||(24462951-24463106)
chr7 (61-213)||(23982753-23982907)
chr7 (80-201)||(47707902-47708024)
chr7 (63-213)||(45501485-45501637)
chr7 (60-213)||(7170029-7170183)
chr7 (63-202)||(25709399-25709540)
chr7 (62-213)||(36548459-36548611)
chr7 (64-158)||(7899487-7899582)
chr7 (60-213)||(19889367-19889521)
chr7 (63-149)||(29398134-29398221)
chr7 (80-158)||(26300653-26300731)
chr7 (61-213)||(39757108-39757261)
chr7 (64-157)||(44473513-44473607)
chr7 (133-213)||(19868140-19868221)
chr7 (60-213)||(9331988-9332142)
chr7 (61-202)||(47457459-47457602)
chr7 (65-149)||(26037184-26037269)
chr7 (60-180)||(8561514-8561634)
chr7 (114-178)||(11680070-11680134)
chr7 (64-186)||(3530115-3530238)
chr7 (64-118)||(26050462-26050517)
chr7 (64-118)||(26059821-26059876)
chr7 (80-170)||(12624707-12624796)
chr7 (60-105)||(32117949-32117995)
chr7 (80-121)||(2341868-2341909)
chr7 (61-149)||(36032541-36032630)
chr7 (83-173)||(41572286-41572372)
chr7 (61-108)||(820539-820587)
chr7 (61-112)||(3561876-3561928)
chr7 (64-171)||(5833424-5833532)
chr7 (81-129)||(12130507-12130555)
chr7 (139-191)||(23024772-23024824)
chr7 (65-148)||(41331458-41331542)
[»] chr5 (30 HSPs)
chr5 (60-213)||(30839808-30839962)
chr5 (59-212)||(6863584-6863738)
chr5 (60-213)||(36597606-36597760)
chr5 (80-213)||(40512978-40513111)
chr5 (63-190)||(40166331-40166459)
chr5 (63-213)||(35469579-35469732)
chr5 (61-213)||(2795550-2795703)
chr5 (60-157)||(3398303-3398401)
chr5 (59-213)||(8103576-8103731)
chr5 (63-151)||(23995416-23995505)
chr5 (88-170)||(18150484-18150566)
chr5 (80-173)||(18841723-18841816)
chr5 (101-213)||(11249996-11250108)
chr5 (63-178)||(15240950-15241066)
chr5 (80-186)||(15820279-15820386)
chr5 (58-213)||(11636758-11636914)
chr5 (80-204)||(31567509-31567634)
chr5 (63-158)||(32019984-32020080)
chr5 (80-202)||(24014706-24014828)
chr5 (60-212)||(4047440-4047593)
chr5 (90-156)||(39043237-39043303)
chr5 (63-121)||(40980492-40980551)
chr5 (64-178)||(41350265-41350379)
chr5 (65-117)||(30893752-30893805)
chr5 (80-116)||(3737890-3737926)
chr5 (64-202)||(16174623-16174762)
chr5 (84-215)||(24329657-24329789)
chr5 (88-184)||(26265070-26265166)
chr5 (81-141)||(30893453-30893513)
chr5 (81-173)||(39047247-39047338)
[»] chr4 (50 HSPs)
chr4 (60-213)||(50352329-50352483)
chr4 (61-213)||(9759140-9759293)
chr4 (60-213)||(39876857-39877011)
chr4 (60-213)||(40049585-40049739)
chr4 (61-209)||(34941308-34941458)
chr4 (63-172)||(10658417-10658527)
chr4 (63-172)||(10872562-10872672)
chr4 (80-178)||(55813926-55814024)
chr4 (60-157)||(44916640-44916738)
chr4 (61-173)||(19450898-19451011)
chr4 (63-202)||(23545513-23545654)
chr4 (80-202)||(2096908-2097031)
chr4 (59-212)||(27362418-27362573)
chr4 (64-213)||(52391324-52391475)
chr4 (60-173)||(19468261-19468375)
chr4 (61-213)||(49181098-49181252)
chr4 (61-213)||(51691368-51691521)
chr4 (160-213)||(10658542-10658595)
chr4 (160-213)||(10872687-10872740)
chr4 (60-173)||(27019327-27019441)
chr4 (80-212)||(38222313-38222447)
chr4 (63-183)||(1378075-1378195)
chr4 (60-147)||(18882264-18882352)
chr4 (66-173)||(24684904-24685012)
chr4 (63-118)||(40682554-40682609)
chr4 (63-187)||(4779436-4779562)
chr4 (61-202)||(17409861-17410004)
chr4 (61-202)||(33632201-33632343)
chr4 (80-202)||(37784878-37785001)
chr4 (100-178)||(33288270-33288348)
chr4 (80-173)||(19838709-19838802)
chr4 (80-195)||(16069225-16069341)
chr4 (64-213)||(23553596-23553747)
chr4 (163-213)||(36000040-36000091)
chr4 (60-158)||(42479889-42479988)
chr4 (133-202)||(13009826-13009896)
chr4 (57-118)||(23438277-23438339)
chr4 (62-213)||(25843317-25843473)
chr4 (104-202)||(35645043-35645145)
chr4 (48-208)||(41415540-41415703)
chr4 (60-186)||(53376405-53376534)
chr4 (62-212)||(29190815-29190966)
chr4 (99-203)||(44571566-44571669)
chr4 (64-213)||(10389269-10389419)
chr4 (80-155)||(41488736-41488811)
chr4 (60-213)||(54495634-54495789)
chr4 (60-117)||(23051379-23051437)
chr4 (53-109)||(3085801-3085858)
chr4 (65-157)||(22130636-22130728)
chr4 (61-112)||(35999945-35999997)
[»] chr3 (41 HSPs)
chr3 (60-213)||(2571295-2571449)
chr3 (60-213)||(12515471-12515625)
chr3 (60-213)||(10307793-10307947)
chr3 (63-213)||(46492343-46492495)
chr3 (59-202)||(51618087-51618229)
chr3 (63-213)||(13495320-13495472)
chr3 (64-173)||(54527707-54527817)
chr3 (62-196)||(2566529-2566661)
chr3 (84-155)||(26291253-26291324)
chr3 (53-213)||(38389473-38389635)
chr3 (60-157)||(50204486-50204584)
chr3 (56-149)||(51401531-51401625)
chr3 (80-215)||(23638067-23638203)
chr3 (63-187)||(33474473-33474599)
chr3 (64-213)||(40497074-40497224)
chr3 (63-178)||(35414809-35414925)
chr3 (80-202)||(2379090-2379210)
chr3 (59-157)||(42180135-42180234)
chr3 (80-178)||(23803064-23803162)
chr3 (84-173)||(26499637-26499725)
chr3 (67-213)||(11610941-11611088)
chr3 (64-173)||(51567821-51567928)
chr3 (114-169)||(46492260-46492315)
chr3 (60-145)||(40330292-40330378)
chr3 (60-157)||(45983589-45983687)
chr3 (64-136)||(8165750-8165823)
chr3 (80-199)||(53718346-53718467)
chr3 (64-170)||(27549611-27549721)
chr3 (63-122)||(40930169-40930229)
chr3 (166-212)||(16875128-16875175)
chr3 (91-178)||(38785942-38786029)
chr3 (60-117)||(23523069-23523127)
chr3 (64-149)||(31318732-31318818)
chr3 (64-157)||(37332196-37332290)
chr3 (80-126)||(38277447-38277493)
chr3 (63-213)||(20938083-20938235)
chr3 (62-158)||(49396462-49396559)
chr3 (61-112)||(3863457-3863509)
chr3 (165-213)||(37444173-37444221)
chr3 (81-117)||(38786343-38786379)
chr3 (80-156)||(41541334-41541410)
[»] chr6 (33 HSPs)
chr6 (58-213)||(33017751-33017907)
chr6 (59-213)||(28943765-28943920)
chr6 (61-213)||(14228124-14228277)
chr6 (60-213)||(17552584-17552738)
chr6 (63-213)||(30591163-30591315)
chr6 (61-157)||(34692437-34692534)
chr6 (53-213)||(2830670-2830832)
chr6 (64-213)||(8977467-8977618)
chr6 (64-213)||(31069583-31069733)
chr6 (63-213)||(10887055-10887207)
chr6 (80-169)||(23936394-23936483)
chr6 (80-199)||(17141315-17141435)
chr6 (63-173)||(4371907-4372017)
chr6 (59-200)||(6016895-6017038)
chr6 (61-213)||(18332686-18332840)
chr6 (89-202)||(30623363-30623477)
chr6 (61-178)||(31169761-31169879)
chr6 (61-117)||(3853066-3853123)
chr6 (80-203)||(1017796-1017920)
chr6 (58-125)||(3261193-3261261)
chr6 (61-196)||(17596385-17596521)
chr6 (62-169)||(29863301-29863409)
chr6 (64-151)||(31503831-31503919)
chr6 (82-189)||(28757506-28757613)
chr6 (62-120)||(29065424-29065483)
chr6 (62-120)||(29120277-29120336)
chr6 (63-186)||(27819627-27819752)
chr6 (80-157)||(28759032-28759109)
chr6 (166-213)||(5362996-5363044)
chr6 (64-156)||(10671598-10671689)
chr6 (134-213)||(22974645-22974724)
chr6 (134-213)||(23813677-23813756)
chr6 (62-117)||(31568232-31568288)
[»] chr2 (48 HSPs)
chr2 (59-213)||(7757782-7757937)
chr2 (60-213)||(5583555-5583709)
chr2 (60-213)||(38248417-38248570)
chr2 (64-213)||(34213950-34214103)
chr2 (60-209)||(24729574-24729725)
chr2 (52-213)||(15411611-15411774)
chr2 (80-158)||(17234956-17235034)
chr2 (135-199)||(40503054-40503119)
chr2 (60-178)||(9450319-9450438)
chr2 (61-213)||(9747343-9747497)
chr2 (60-151)||(29157826-29157918)
chr2 (65-213)||(19228452-19228601)
chr2 (91-213)||(26229883-26230004)
chr2 (89-202)||(11660946-11661059)
chr2 (60-213)||(12016693-12016847)
chr2 (60-213)||(27665041-27665195)
chr2 (60-157)||(4576323-4576421)
chr2 (63-187)||(5853463-5853589)
chr2 (63-187)||(16493532-16493658)
chr2 (80-213)||(40562095-40562229)
chr2 (60-136)||(8065227-8065304)
chr2 (80-173)||(43806427-43806520)
chr2 (103-213)||(45302365-45302477)
chr2 (63-213)||(20566017-20566169)
chr2 (80-187)||(25948091-25948199)
chr2 (65-147)||(26003348-26003431)
chr2 (63-187)||(22704589-22704715)
chr2 (63-202)||(7720152-7720293)
chr2 (60-213)||(16126556-16126710)
chr2 (60-213)||(25997999-25998154)
chr2 (133-202)||(2051651-2051721)
chr2 (63-172)||(23932633-23932743)
chr2 (63-199)||(45062238-45062376)
chr2 (132-213)||(22162147-22162228)
chr2 (134-203)||(34817580-34817649)
chr2 (80-149)||(41771140-41771209)
chr2 (162-213)||(14377451-14377503)
chr2 (134-213)||(16919226-16919305)
chr2 (134-213)||(22705481-22705560)
chr2 (60-202)||(29142111-29142255)
chr2 (80-213)||(13351229-13351363)
chr2 (59-117)||(17265527-17265586)
chr2 (60-158)||(36731262-36731361)
chr2 (88-213)||(36612757-36612883)
chr2 (88-213)||(36620608-36620734)
chr2 (63-167)||(15231904-15232009)
chr2 (91-172)||(26129135-26129216)
chr2 (80-173)||(37471758-37471851)
[»] chr8 (47 HSPs)
chr8 (61-213)||(2161414-2161567)
chr8 (60-213)||(3306052-3306206)
chr8 (60-213)||(26363987-26364141)
chr8 (60-213)||(12132009-12132164)
chr8 (61-213)||(5573314-5573466)
chr8 (60-186)||(28014855-28014981)
chr8 (60-170)||(20514703-20514814)
chr8 (60-186)||(27874678-27874804)
chr8 (60-202)||(26682105-26682249)
chr8 (60-158)||(14961660-14961759)
chr8 (60-213)||(7140456-7140610)
chr8 (61-207)||(39024855-39025002)
chr8 (61-213)||(14816124-14816277)
chr8 (61-213)||(14829463-14829616)
chr8 (88-202)||(34741691-34741805)
chr8 (63-187)||(40225987-40226113)
chr8 (80-157)||(297178-297255)
chr8 (60-172)||(6818085-6818198)
chr8 (80-149)||(24993430-24993499)
chr8 (62-213)||(39701802-39701954)
chr8 (58-173)||(16445731-16445846)
chr8 (60-213)||(10129130-10129284)
chr8 (60-213)||(26834587-26834742)
chr8 (60-213)||(31812139-31812294)
chr8 (80-170)||(7393263-7393352)
chr8 (61-150)||(15198898-15198988)
chr8 (60-173)||(38843771-38843885)
chr8 (53-121)||(7977997-7978066)
chr8 (53-178)||(12189578-12189704)
chr8 (53-178)||(12434006-12434132)
chr8 (63-157)||(38212944-38213039)
chr8 (59-173)||(45006037-45006151)
chr8 (60-149)||(9580106-9580196)
chr8 (134-215)||(9743886-9743967)
chr8 (64-212)||(13327942-13328091)
chr8 (58-213)||(19343831-19343988)
chr8 (64-157)||(32186269-32186363)
chr8 (80-213)||(36967088-36967222)
chr8 (81-202)||(39430522-39430645)
chr8 (80-186)||(44091372-44091478)
chr8 (54-117)||(1203724-1203788)
chr8 (59-117)||(18567412-18567471)
chr8 (161-212)||(45516316-45516367)
chr8 (65-158)||(7489684-7489778)
chr8 (81-158)||(6141730-6141807)
chr8 (80-212)||(40210839-40210971)
chr8 (63-110)||(13496709-13496757)
[»] chr1 (52 HSPs)
chr1 (61-213)||(1502718-1502871)
chr1 (60-213)||(23576411-23576565)
chr1 (92-212)||(3121146-3121266)
chr1 (61-213)||(36490805-36490959)
chr1 (63-213)||(23591724-23591876)
chr1 (63-178)||(51920431-51920547)
chr1 (63-148)||(1366139-1366225)
chr1 (59-173)||(39310782-39310897)
chr1 (62-202)||(13321913-13322055)
chr1 (61-213)||(30362993-30363147)
chr1 (53-157)||(6180269-6180374)
chr1 (80-213)||(47355396-47355529)
chr1 (59-213)||(25465185-25465340)
chr1 (60-213)||(39150324-39150478)
chr1 (60-157)||(35512808-35512906)
chr1 (61-213)||(6754498-6754651)
chr1 (60-213)||(17919480-17919634)
chr1 (64-158)||(35438797-35438892)
chr1 (61-202)||(38812777-38812920)
chr1 (63-213)||(7519996-7520149)
chr1 (97-213)||(34050318-34050435)
chr1 (64-170)||(9516651-9516758)
chr1 (59-213)||(41624856-41625011)
chr1 (61-213)||(313776-313929)
chr1 (80-186)||(29635766-29635872)
chr1 (61-213)||(34801994-34802147)
chr1 (60-202)||(22167372-22167516)
chr1 (80-171)||(7824876-7824967)
chr1 (63-157)||(25532292-25532387)
chr1 (60-213)||(30171905-30172060)
chr1 (60-213)||(30187446-30187601)
chr1 (64-122)||(41676561-41676620)
chr1 (60-213)||(44918051-44918205)
chr1 (60-149)||(3168065-3168155)
chr1 (80-158)||(24669009-24669087)
chr1 (162-213)||(51382398-51382450)
chr1 (58-116)||(5875210-5875269)
chr1 (55-112)||(6569977-6570035)
chr1 (80-154)||(28016266-28016340)
chr1 (60-116)||(3096333-3096390)
chr1 (80-157)||(23808517-23808594)
chr1 (65-149)||(39781432-39781517)
chr1 (80-125)||(48085879-48085924)
chr1 (80-173)||(49798843-49798936)
chr1 (60-108)||(51382446-51382495)
chr1 (87-148)||(51467545-51467606)
chr1 (134-213)||(8062231-8062310)
chr1 (84-215)||(21854139-21854271)
chr1 (124-172)||(33048174-33048222)
chr1 (146-202)||(35941106-35941162)
chr1 (104-180)||(43671750-43671825)
chr1 (64-158)||(43909275-43909368)
[»] scaffold0305 (2 HSPs)
scaffold0305 (63-202)||(17788-17929)
scaffold0305 (63-178)||(17996-18112)
[»] scaffold0229 (1 HSPs)
scaffold0229 (63-148)||(24527-24613)
[»] scaffold0061 (1 HSPs)
scaffold0061 (61-213)||(52777-52930)
[»] scaffold0017 (1 HSPs)
scaffold0017 (61-213)||(145704-145857)
[»] scaffold0036 (1 HSPs)
scaffold0036 (63-202)||(94018-94159)
[»] scaffold0011 (1 HSPs)
scaffold0011 (62-212)||(13113-13264)
[»] scaffold0136 (1 HSPs)
scaffold0136 (80-153)||(1461-1534)
[»] scaffold0727 (1 HSPs)
scaffold0727 (64-213)||(5717-5868)
[»] scaffold0111 (1 HSPs)
scaffold0111 (60-213)||(37111-37266)
[»] scaffold0618 (1 HSPs)
scaffold0618 (80-186)||(8432-8538)
[»] scaffold0149 (1 HSPs)
scaffold0149 (64-186)||(22517-22641)
[»] scaffold0631 (1 HSPs)
scaffold0631 (80-125)||(539-584)


Alignment Details
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 33343168 - 33343015
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||    
T  33343168 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatatataactttttg 33343069  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33343068 ttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 33343015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 46290191 - 46290037
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  46290191 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataacttttt 46290092  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46290091 gttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 46290037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 34270441 - 34270292
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||||    
T  34270441 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttg 34270342  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||| |||||||||||    ||||||||||||||||||||    
T  34270341 ttaaataattgttggtttcaataaaaactt----cttttagttaccttaacatg 34270292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 33072161 - 33072052
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||| ||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  33072161 gggtttttctatcatgtgcaaatttgtacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttg 33072062  T
Q  160 ttaaataatt 169  Q
    ||||||||||    
T  33072061 ttaaataatt 33072052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 8091311 - 8091453
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||||||| |||||||| ||| |||||||||| || ||||||||||||| |||| |||  || ||  ||||||||| ||||||||||||||||||      
T  8091311 ggtttttctatcatgtgcaaatttacacatgttaagaagtttaaaatagtaactttgcattgtaacttttacattttgtgttaaatatataactttttaa 8091410  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    ||||||||| ||| |||| |||||||| |||||||||||||||    
T  8091411 taaataattattgattttcaataaaaatttgctacttttagtt 8091453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 28323295 - 28323173
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttta 179  Q
    ||||| |||||||||| |||||||||||| ||||||| |||||||| ||  ||||||| |||| ||||||||| |||||  |||| ||| | || |||||    
T  28323295 aatttacacatgttaaaaaatttaaaataataattttatattagaacttatacattttatatttaatatataattttttaataaaaaatcgctgttttta 28323196  T
Q  180 ataaaaacttgctacttttagtt 202  Q
    |||||||||||||| ||||||||    
T  28323195 ataaaaacttgctagttttagtt 28323173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 4969956 - 4969856
Alignment:
Q  58 ttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttt 156  Q
    ||||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| ||||||    
T  4969956 ttagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttt 4969857  T
Q  157 t 157  Q
    |    
T  4969856 t 4969856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 24462951 - 24463106
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||| ||||||| |||||||| |||||||||||||| || ||||||||| ||| ||||  ||| | |||| ||||||| |||||||||| ||  ||||    
T  24462951 tagggtatttctatcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagttttt 24463050  T
Q  158 tgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |  |||||| |||||| ||| ||||| || || |||||||||||| ||||||||||    
T  24463051 taataaatacttgttgttttcaataagaaattactacttttagttgccttaacatg 24463106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 23982753 - 23982907
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||| ||||| ||||||||| |||||| ||||  || ||| |||   ||||| |||||||||| ||| |||||     
T  23982753 gggtttttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaagttttta 23982852  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||| |||||||||||||| ||| |||| || |||||||||||| ||||||||||    
T  23982853 ataattaattgttggttttgaatgaaaagttactacttttagttgccttaacatg 23982907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 201
Target Start/End: Original strand, 47707902 - 47708024
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    ||||| || ||||||| || |||||||||||||||||| |||  || ||  ||||||||||||||||||||||||||||  ||||||||||||| ||||     
T  47707902 aattttcatatgttaagaagtttaaaatagtaattttgaattgaaacttatacattttgtattaaatatataactttttaataaataattgttgtttttc 47708001  T
Q  179 aataaaaacttgctacttttagt 201  Q
     |||||| |||| ||||||||||    
T  47708002 cataaaatcttgttacttttagt 47708024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 45501637 - 45501485
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||||||||| |||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||| ||   |    
T  45501637 gtttttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactgttgaat 45501538  T
Q  162 aaataattgttg-gttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||  |||||| ||||| || ||||| |||||||  ||||||||    
T  45501537 aaataattgttgttttttaagaaaaagttactactattagttattttaacatg 45501485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 7170183 - 7170029
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || ||| |||  |||||| |||||| ||| ||  |||||    
T  7170183 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagattttt 7170084  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
      ||| ||||||||||||| |||||||| || ||| |||||||| ||||||||||    
T  7170083 aataattaattgttggtttcaataaaaagttactatttttagttgccttaacatg 7170029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 25709399 - 25709540
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || ||||||||||||| |||||||| ||| |||  |||||  |||||||||  || ||||||  |    
T  25709399 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtagctttttaat 25709498  T
Q  162 aaataattgttggtt-ttaataaaaacttgctacttttagtt 202  Q
    |||| ||||||| || | |||||||| || ||||||||||||    
T  25709499 aaattattgttgtttatcaataaaaaattactacttttagtt 25709540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 36548459 - 36548611
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||| ||| |||||||| |||||||||||||| || |||||| |||||| ||||  ||| |||||| |  |||| |||||||||| ||| | |||      
T  36548459 ggtttttttatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgtaa-tatttaa 36548557  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | |||||||||||||||| |||||||| || |||||||||||| ||||||||||    
T  36548558 tcaataattgttggttttcaataaaaaattactacttttagttcccttaacatg 36548611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 7899487 - 7899582
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||| |||| ||||| ||| || ||| | ||||| ||||||||||||||| ||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatatataacatttt 7899582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 19889521 - 19889367
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || ||| |||    |||| |||||||||| ||||||||     
T  19889521 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaactttta 19889422  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | ||||||||||||||||| ||| |||| || |||||||||||| ||||||||||    
T  19889421 at-aaataattgttggttttcaatgaaaagttactacttttagttgccttaacatg 19889367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 29398134 - 29398221
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    |||||||||| |||| ||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  |||||||||||    
T  29398134 gtttttctatcatgttcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 29398221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 26300731 - 26300653
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||||||||||||||| || ||||||||||||| |||| |||  || ||| | |||||||||||||| |||||||||||    
T  26300731 aatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgtatattttgtattaaatgtataacttttt 26300653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 39757108 - 39757261
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || ||||||||||||| |||   ||  ||||||    |||| |||||||||| || | ||||     
T  39757108 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgtagc-tttta 39757206  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | ||||||||||| |||| ||| |||| || |||||||||||||||||||||||    
T  39757207 atcaataattgttgattttcaatgaaaaattactacttttagttaccttaacatg 39757261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 44473513 - 44473607
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||| ||| |||||||| |||| ||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||||||    
T  44473513 tttttttatcatgtgcaaatttgaacatgttaagaagtttaaaatagaaattttgtatttgaacttgcacatttaatattaaatataaaactttt 44473607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 213
Target Start/End: Complemental strand, 19868221 - 19868140
Alignment:
Q  133 attttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||| ||||||||||||||||||||| |||||||||| || |||| ||| |||| || ||||||||||||  |||||||||    
T  19868221 attttatattaaatatataactttttgataaataattggtgtttttcaatgaaaatttactacttttagttgtcttaacatg 19868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 9332142 - 9331988
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  ||  || |||    |||| |||||||||| ||||  |||    
T  9332142 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaac-attt 9332044  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      | ||||||||||| |||| ||| |||| || |||||||||||||||||||||||    
T  9332043 aatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatg 9331988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 47457459 - 47457602
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||| |||||| ||||  || ||||||   |||||| ||||| || | || |||||      
T  47457459 gggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatatgtgtagcttttaa 47457558  T
Q  160 ttaaataattgttggttttaat-aaaaacttgctacttttagtt 202  Q
     ||||||||||||  ||| ||| ||||| || ||||||||||||    
T  47457559 ataaataattgttattttcaataaaaaaattactacttttagtt 47457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 26037269 - 26037184
Alignment:
Q  65 ttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    |||||||| |||||||| |||||| ||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||| |||||||    
T  26037269 ttttctatcatgtgcaaatttgcagatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatatcaaatata 26037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 8561634 - 8561514
Alignment:
Q  60 agggtttttctataatgtgcaatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    ||||||||| ||| |||||||| ||  ||||||||| |  |||||||||| ||||||||||| ||| ||  ||||||   |||||||||  |||||||      
T  8561634 agggtttttttatcatgtgcaaatttgacatgttaagacgtttaaaatagaaattttgtatttgaacttttacatttataattaaatattaaacttttga 8561535  T
Q  160 ttaaataattgttggttttaa 180  Q
     ||||||||||||| ||||||    
T  8561534 ataaataattgttgtttttaa 8561514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 11680070 - 11680134
Alignment:
Q  114 tttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt 178  Q
    ||||||||  |||||  ||||||| ||||||||||||||||||||  ||||||||||||| ||||    
T  11680070 tttgtattgaaatttttacattttatattaaatatataactttttaataaataattgttgttttt 11680134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 186
Target Start/End: Original strand, 3530115 - 3530238
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||| ||| |||||||| ||| ||||| |||| |  |||| |||||||| ||| ||||  ||||||  |||||| ||| |||||||||| |||||  ||    
T  3530115 tttttatatcatgtgcaaatttacacatattaagacgtttagaatagtaagtttttattgaaatttgtgcattttatatcaaatatataattttttaata 3530214  T
Q  163 aataattgttggttttaataaaaa 186  Q
    ||||||||||| ||| ||||||||    
T  3530215 aataattgttgttttcaataaaaa 3530238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 26050462 - 26050517
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgt 118  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||| |||| |||||    
T  26050462 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgt 26050517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 26059821 - 26059876
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgt 118  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||| |||| |||||    
T  26059821 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaaatttgt 26059876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 12624796 - 12624707
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattg 170  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||| || |||   ||||| ||||||||||| || |||||  ||||||||||    
T  12624796 aatttgcacatgttaagaaatttaaaatggtaagtttgtctta-aacttgtgtattttatattaaatatacaagtttttaataaataattg 12624707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 32117995 - 32117949
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaa 105  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||    
T  32117995 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaa 32117949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 121
Target Start/End: Complemental strand, 2341909 - 2341868
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtatt 121  Q
    |||||||||||||||| ||||||||||||||||  |||||||    
T  2341909 aatttgcacatgttaaaaaatttaaaatagtaaaattgtatt 2341868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 149
Target Start/End: Original strand, 36032541 - 36032630
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    |||||||||||| ||||| || ||| |||||||||| ||||||||||||  ||||||||||| ||  ||  ||||||  |||||||||||    
T  36032541 gggtttttctattatgtgaaaattttcacatgttaagaaatttaaaataaaaattttgtattggatcttatacatttgatattaaatata 36032630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 41572372 - 41572286
Alignment:
Q  83 ttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    ||||||||||||| || ||||||||||||| |||| ||    | ||  | |||||||||||||||||||||||| |  |||||||||||||    
T  41572372 ttgcacatgttaaaaagtttaaaatagtaactttgcat----acttatatattttgtattaaatatataactttctaataaataattgttg 41572286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 820539 - 820587
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaata 108  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||||    
T  820539 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaata 820587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 3561876 - 3561928
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaa 112  Q
    |||||||||||| |||||||| |||||||||||||| || |||||| ||||||    
T  3561876 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaa 3561928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 5833532 - 5833424
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| |||||||||||||| || ||||||  ||||| || || |||||| |||  |||| | |||||||||| || ||||||  ||    
T  5833532 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgcattctatattaaatatgtagctttttaata 5833433  T
Q  163 aataattgt 171  Q
    |||| ||||    
T  5833432 aatagttgt 5833424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 12130507 - 12130555
Alignment:
Q  81 atttgcacatgttaataaatttaaaatagtaattttgtattagaatttg 129  Q
    ||||||| || |||| || ||||||||||||| ||||||||||||||||    
T  12130507 atttgcatatattaagaagtttaaaatagtaaatttgtattagaatttg 12130555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 23024824 - 23024772
Alignment:
Q  139 tattaaatatataactttttgttaaataattgttggttttaataaaaacttgc 191  Q
    ||||||||||||||||||||  ||| ||| ||||| ||| |||||||||||||    
T  23024824 tattaaatatataactttttaataagtaactgttgttttcaataaaaacttgc 23024772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 148
Target Start/End: Original strand, 41331458 - 41331542
Alignment:
Q  65 ttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatat 148  Q
    |||||||| |||||||| |||||||||| ||| ||||||||| |||||| ||||  || ||| |||  |||||| ||||||||||    
T  41331458 ttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatat 41331542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 6e-61; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 30839962 - 30839808
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  30839962 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataacttttt 30839863  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30839862 gttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 30839808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 6863738 - 6863584
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||    
T  6863738 tagggtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatatataactttt 6863639  T
Q  158 tgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacat 212  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6863638 tattaaataattgttggtttcaataaaaacttgctacttttagttaccttaacat 6863584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 36597760 - 36597606
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  36597760 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataacttttt 36597661  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  36597660 gttaaataattgttggtttcaataaaaatttgctacttttagttaccttaacatg 36597606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 80 - 213
Target Start/End: Complemental strand, 40513111 - 40512978
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttta 179  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| |    
T  40513111 aatttgcacatgttaaaaaatttaaaatagtaactttgcattggaatttgaatattttgtatcaaatatataactttttgttaaataattgttgatttca 40513012  T
Q  180 ataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||| |||||| ||||||||||||||||    
T  40513011 ataaaaacttactacttctagttaccttaacatg 40512978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 40166459 - 40166331
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||| |||||||||||| |||| ||| || | ||||||  || ||| ||||||||||||||||||||||||||||| |    
T  40166459 gtttttctattatgtgcaaatttgca-atgttaataaatctaaattagcaactatgtattgaaacttgtacattttgtattaaatatataactttttgat 40166361  T
Q  162 aaataattgttggtttt-aataaaaacttg 190  Q
    |||||||||||| |||| ||||||||||||    
T  40166360 aaataattgttgtttttcaataaaaacttg 40166331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 35469732 - 35469579
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| ||||| || |||||||||||||| ||||||||||||||||  || |||| ||| | |   ||||| |||||||||||||||||||| ||    
T  35469732 gtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaagcttttattggaactagtttattttatattaaatatataactttttctt 35469633  T
Q  162 aaataattgttggtttt-aat-aaaaacttgctacttttagttaccttaacatg 213  Q
    || | ||||||| |||| ||| ||||| ||||||||||||||||| ||||||||    
T  35469632 aattgattgttgtttttcaataaaaaaattgctacttttagttactttaacatg 35469579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 2795703 - 2795550
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  || ||| |||    ||||||||||||||| ||||||||      
T  2795703 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaa 2795604  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | || |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  2795603 tcaa-taattgttggttttcaatgaaaagttactacttttagttaccttaacatg 2795550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 3398401 - 3398303
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||||||    
T  3398401 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactttt 3398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 8103576 - 8103731
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || ||| |||  |||||| |||||| ||| ||  ||||    
T  8103576 tagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttt 8103675  T
Q  158 tgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |  ||| ||||||||||||| |||||||| || ||| |||||||| ||||||||||    
T  8103676 taataattaattgttggtttcaataaaaagttactatttttagttgccttaacatg 8103731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 23995416 - 23995505
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatata 151  Q
    |||||||||| |||||||| |||| ||||||||| || ||||||||||||||||| ||||  || ||| |||||||||||||||||||||    
T  23995416 gtttttctattatgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatatata 23995505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 18150566 - 18150484
Alignment:
Q  88 catgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattg 170  Q
    |||||||| || ||||||||||||||||||  |||||| ||| | ||||||||||||||||||||| ||||  ||||||||||    
T  18150566 catgttaagaagtttaaaatagtaattttgcgttagaacttgtatattttgtattaaatatataacattttaataaataattg 18150484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 18841723 - 18841816
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    |||||||| ||||||| || |||||||||| |||||||||||  |||||| ||||||  ||||||||||| |||||||   |||||||||||||    
T  18841723 aatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaatttgtacatttaatattaaatataaaacttttgaataaataattgttg 18841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 11249996 - 11250108
Alignment:
Q  101 ttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaataaaaacttgctacttttag 200  Q
    |||||||||||| |||| |||  ||  || ||||||||||||||| |||||| || ||  ||||||||||||| || | || ||||||||||||||||||    
T  11249996 ttaaaatagtaactttgcattgaaacatgtacattttgtattaaacatataatttattactaaataattgttgtttatcattaaaacttgctacttttag 11250095  T
Q  201 ttaccttaacatg 213  Q
    || | ||||||||    
T  11250096 ttgctttaacatg 11250108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 15240950 - 15241066
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||| ||||||||| || || |||||| ||| ||||||||  ||||||  ||| || |||||||||||||| |||||  |    
T  15240950 gtttttctatcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatatataattttttaat 15241049  T
Q  162 aaataattgttggtttt 178  Q
    |||||||||||| ||||    
T  15241050 aaataattgttgttttt 15241066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 15820386 - 15820279
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    ||||| ||||||| || ||||| |||||||||| ||||||||  |||||||||||||| |||||||||||  || ||||  ||||||||| ||| ||||     
T  15820386 aatttacacatgtcaagaaattcaaaatagtaaatttgtattgaaatttgaacattttctattaaatataataccttttaataaataattattgtttttc 15820287  T
Q  179 aataaaaa 186  Q
    ||||||||    
T  15820286 aataaaaa 15820279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 11636914 - 11636758
Alignment:
Q  58 ttagggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttt 156  Q
    ||||||||||||||| |||||| |||||||||||| ||| || |||||| |||||| ||||  ||  || |||  || ||| |||||||||| ||| |||    
T  11636914 ttagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgca-tttatattaaatatgtaaattt 11636816  T
Q  157 ttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||  ||| |||||||||||||| ||| |||| || |||||||||||| | ||||||||    
T  11636815 ttaataattaattgttggttttcaatgaaaagttactacttttagtttctttaacatg 11636758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 31567509 - 31567634
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| ||||||||||| |||||||||| ||  ||||||  |||||| |||||||||| ||  |||||  | ||||||| ||| ||||     
T  31567509 aatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatatgtagttttttaatgaataattattgtttttc 31567608  T
Q  179 aataaaaacttgctacttttagttac 204  Q
    |||||||| || ||  ||||||||||    
T  31567609 aataaaaagttactctttttagttac 31567634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 158
Target Start/End: Original strand, 32019984 - 32020080
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||| |||| ||||| || ||| |||   ||| | ||||||||| ||||||||||    
T  32019984 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaatagataacttttt 32020080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 24014706 - 24014828
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| || ||| ||||||||| ||   |||  || ||| | ||||||||||||||||||| ||||||| ||||| ||| || |||||     
T  24014706 aatttgcacatgttaaaaagttttaaatagtaacttcacattgaaacttgtatattttgtattaaatatatatctttttggtaaat-attattagttttg 24014804  T
Q  179 aataaaaacttgctacttttagtt 202  Q
    |||||||||||  |||||||||||    
T  24014805 aataaaaactttatacttttagtt 24014828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 4047593 - 4047440
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||| |||||| |||   || ||| |||    |||| |||||||||| || | ||||    
T  4047593 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagc-tttt 4047495  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacat 212  Q
      | || ||||||||||||| ||| |||| || ||||||||||||||||||||||    
T  4047494 aatcaacaattgttggttttcaatgaaaagttactacttttagttaccttaacat 4047440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 39043303 - 39043237
Alignment:
Q  90 tgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttt 156  Q
    |||||| || |||||||||| |||||| |||||||||||| | |||| |||||||||||| ||||||    
T  39043303 tgttaagaagtttaaaatagaaattttatattagaatttgtaaatttagtattaaatataaaacttt 39043237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 40980551 - 40980492
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtatt 121  Q
    |||||||||| |||||||| ||||||||| |||| || |||||||||| |||||||||||    
T  40980551 gtttttctatcatgtgcaaatttgcacatattaaaaagtttaaaatagaaattttgtatt 40980492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 41350379 - 41350265
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||| ||| |||||||| |||||||||||||| || |||||| |||||||||||  || ||| |||  | |||| |||||||||| |||| ||||  ||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgtaac-ttttaata 41350281  T
Q  163 aataattgttggtttt 178  Q
    ||||||||||| ||||    
T  41350280 aataattgttgatttt 41350265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 30893805 - 30893752
Alignment:
Q  65 ttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    |||||||| |||||||| |||||||||||||| || ||||||||||||| ||||    
T  30893805 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttg 30893752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 3737890 - 3737926
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaatttt 116  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  3737890 aatttgcacatgttaataagtttaaaatagaaatttt 3737926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 202
Target Start/End: Original strand, 16174623 - 16174762
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| || ||||| |||||||||  ||| ||||||||| |||||| |||| |||  || |||  |||||  |||||||||| ||| |||||  ||    
T  16174623 tttttctatcatttgcaaatttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtgcattta-tattaaatatgtaagtttttaata 16174721  T
Q  163 aataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    | |||||||||||||| ||| |||| || ||||||||||||    
T  16174722 attaattgttggttttcaatgaaaagttactacttttagtt 16174762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 24329657 - 24329789
Alignment:
Q  84 tgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt-aata 182  Q
    |||||||||||| || |||||| | |||| ||||  || ||| ||| ||||||| |||||||||  || |||||   ||||||| ||||| |||| |||     
T  24329657 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 24329756  T
Q  183 aaaacttgctacttttagttaccttaacatgca 215  Q
    |||| || |||||||||| || |||||||||||    
T  24329757 aaaaattactacttttagatatcttaacatgca 24329789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 26265070 - 26265166
Alignment:
Q  88 catgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaataaa 184  Q
    |||||||| || |||||||||| | |||||||||  || ||| | ||||  ||||||||||| |||||||   ||||||||||||| |||| |||||    
T  26265070 catgttaagaagtttaaaatagaagttttgtattgaaacttgtatatttaatattaaatataaaacttttaaataaataattgttgtttttcataaa 26265166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 30893513 - 30893453
Alignment:
Q  81 atttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtat 141  Q
    |||| |||||||||| || ||||||||||||| |||| ||| ||||||| |||| ||||||    
T  30893513 attttcacatgttaagaagtttaaaatagtaactttgcattggaatttgtacatattgtat 30893453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 39047247 - 39047338
Alignment:
Q  81 atttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    |||||||| |||||| || |||||||||  |||||||||||  |||||  ||||||  ||||||| |||||| |||||  |||||||||||||    
T  39047247 atttgcacgtgttaagaagtttaaaataaaaattttgtattgaaatttatacatttaatattaaa-atataattttttaataaataattgttg 39047338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 6e-61; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 50352483 - 50352329
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  50352483 agggtttttctatcatatgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaacttgaacattttgtattaaatatataacttttt 50352384  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50352383 gttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 50352329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 9759140 - 9759293
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||| ||| |||||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||||    
T  9759140 gggtttttctatcatgtacaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaagttgaacattttgtattaaatatataactttttg 9759239  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9759240 ttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 9759293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 39877011 - 39876857
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| ||||| || |||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||||| ||||||||||||||||    
T  39877011 agggtttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtatcaaatatataacttttt 39876912  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  39876911 gttaaataattgttggtttcaataaaaacttactacttttagttaccttaacatg 39876857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 40049739 - 40049585
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| ||| ||| || |||||||| |||||||||||||| |||||    
T  40049739 agggtttttctattatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttgcattggaactttaacattttttattaaatatataatttttt 40049640  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||||  |||||||||| |||||||||||||| ||||||||    
T  40049639 gttaaataattgttggtttctataaaaacttactacttttagttactttaacatg 40049585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 34941458 - 34941308
Alignment:
Q  61 gggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||| |||||||||||| ||| || |||||||||||||||||| ||| ||| ||| |||||||||||| |||||||||||||||     
T  34941458 gggtttttctatcatgtgcgaatttgcacatgataagaagtttaaaatagtaattttgcattggaacttgtacattttgtatttaatatataacttttta 34941359  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaa 209  Q
     |||||| |||||| |||| |||||||| ||| ||||||||||||||||||    
T  34941358 ataaatagttgttgtttttcaataaaaagttgttacttttagttaccttaa 34941308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 10658417 - 10658527
Alignment:
Q  63 gtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||| ||| |||||| |||||||||||||||| |||||||||||||||| |||  |||  || |||||||||||||||||||||||||||||||||||    
T  10658417 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgtt 10658516  T
Q  162 aaataattgtt 172  Q
    |||||||||||    
T  10658517 aaataattgtt 10658527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 10872562 - 10872672
Alignment:
Q  63 gtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||| ||| |||||| |||||||||||||||| |||||||||||||||| |||  |||  || |||||||||||||||||||||||||||||||||||    
T  10872562 gtttttttatcatgtgctaatttgcacatgttaaaaaatttaaaatagtaactttacattgaaacttgaacattttgtattaaatatataactttttgtt 10872661  T
Q  162 aaataattgtt 172  Q
    |||||||||||    
T  10872662 aaataattgtt 10872672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 178
Target Start/End: Complemental strand, 55814024 - 55813926
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt 178  Q
    |||||||||||||||| || ||||||||| ||||||||||||  |||||| ||||| ||||||||||||||||||||||  ||||||||||||| ||||    
T  55814024 aatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatatataactttttaataaataattgttgatttt 55813926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 44916640 - 44916738
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||||||||||| |||||||| ||||||||| |||| ||||||||||||| ||||||||||||||| ||| ||||||  ||||||||||| |||||||    
T  44916640 agggtttttctatcatgtgcaaatttgcacatattaaaaaatttaaaatagaaattttgtattagaacttgcacatttaatattaaatataaaactttt 44916738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 19450898 - 19451011
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||||||      
T  19450898 gggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttga 19450997  T
Q  160 ttaaataattgttg 173  Q
     |||||||||||||    
T  19450998 ataaataattgttg 19451011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 23545654 - 23545513
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||||||||||||||||| |||||||||  ||||||||||| ||| ||| ||||||  ||||||||||| |||||||   |    
T  23545654 gtttttctatcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataaaacttttgaat 23545555  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    |||||||||||| |||| || ||||| || ||||| ||||||    
T  23545554 aaataattgttgtttttcaagaaaaaattactactattagtt 23545513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 202
Target Start/End: Complemental strand, 2097031 - 2096908
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| || || ||||| |||| |||||||| ||| |||  |||||| ||||||||||||||||||||  ||||||||||||| ||||     
T  2097031 aatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataactttttaataaataattgttgtttttc 2096932  T
Q  179 aataaaaacttgctacttttagtt 202  Q
    |||||||| |||  ||||||||||    
T  2096931 aataaaaagttgtcacttttagtt 2096908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 27362573 - 27362418
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||||||||||| || |||||| | |||||||||  || |||||||  |||||  |||||||||| || |||||    
T  27362573 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtagctttt 27362474  T
Q  158 tgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacat 212  Q
    || ||||||| | ||| |||| |||||||| || |||||||||| || ||||||||    
T  27362473 tgataaataagttttgtttttcaataaaaaattactacttttagatatcttaacat 27362418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 52391475 - 52391324
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| ||||| || |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||||||   ||    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaata 52391376  T
Q  163 aataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||| |||| || ||||| || ||||| |||||||  ||||||||    
T  52391375 aataattgttgtttttcaaaaaaaagttactactattagttattttaacatg 52391324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 19468375 - 19468261
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||| |||||||||||  || ||| ||||||  ||||||||||| |||||||     
T  19468375 agggtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttg 19468276  T
Q  159 gttaaataattgttg 173  Q
      |||||||||||||    
T  19468275 aataaataattgttg 19468261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 49181252 - 49181098
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| ||||||| |||||| || || |||||||||| ||||||||  || |||  |||||| |||||||||| ||||||||      
T  49181252 gggtttttctatcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttca 49181153  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||| ||||||| |||| ||| |||  ||||||||||||||| ||||||||||    
T  49181152 ataaatgattgttgtttttcaattaaaggttgctacttttagtttccttaacatg 49181098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 51691521 - 51691368
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| ||||| || |||||||||||||| |||||| ||||||||| |||| ||| ||| ||| | |||||| |||||||||||| ||||||     
T  51691521 gggtttttctatcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatatatagcttttta 51691422  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||||||| || ||||| |||||| |||| ||| |||||||| | ||||||||    
T  51691421 ataaataattattagttttcaataaagacttacta-ttttagttgctttaacatg 51691368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 10658542 - 10658595
Alignment:
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10658542 ttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 10658595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 10872687 - 10872740
Alignment:
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10872687 ttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 10872740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 27019441 - 27019327
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||| ||||||| || |||||||||| |||||||||||  || ||| ||||||  ||||||||||| |||||||     
T  27019441 agggtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttg 27019342  T
Q  159 gttaaataattgttg 173  Q
      |||||||||||||    
T  27019341 aataaataattgttg 27019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 212
Target Start/End: Complemental strand, 38222447 - 38222313
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaa-ttttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt 178  Q
    ||||| |||||||||| ||| ||||||| |||| |||||||||| ||||||   ||||| |||||||||||||| |||||  ||||||||||||| ||||    
T  38222447 aatttacacatgttaaaaaaattaaaattgtaaattttgtattaaaatttgtggattttatattaaatatataattttttaataaataattgttgatttt 38222348  T
Q  179 -aataaaaacttgctacttttagttaccttaacat 212  Q
     | |||||| ||| ||||||||||| | |||||||    
T  38222347 cactaaaaatttgttacttttagttcctttaacat 38222313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 1378195 - 1378075
Alignment:
Q  63 gtttttctataatgtgcaatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    |||||||||| | |||||||||||||||||||| ||||||||||| |||| ||| | ||  || ||| ||||||  ||||||||||||||| ||||  ||    
T  1378195 gtttttctatcaggtgcaatttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatatataacattttaata 1378096  T
Q  163 aataattgttggttttaataa 183  Q
    |||||||| || ||| |||||    
T  1378095 aataattgatgttttcaataa 1378075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 147
Target Start/End: Original strand, 18882264 - 18882352
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaata 147  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  |||||||||    
T  18882264 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaata 18882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 173
Target Start/End: Complemental strand, 24685012 - 24684904
Alignment:
Q  66 tttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaa 164  Q
    ||||||| |||||||| |||||||||||||| || |||||||||| ||||||| ||| ||| ||| ||||||  ||||||||||| |||||||   ||||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataaaacttttgaataaa 24684913  T
Q  165 taattgttg 173  Q
    |||||||||    
T  24684912 taattgttg 24684904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 118
Target Start/End: Complemental strand, 40682609 - 40682554
Alignment:
Q  63 gtttttctataatgtgcaatttgcacatgttaataaatttaaaatagtaattttgt 118  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||| |||||    
T  40682609 gtttttctatcatgtgcaatttgcacatgttaagaaatttaaaatagtaactttgt 40682554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 4779436 - 4779562
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || |||| ||| | ||||||| |||  |||||  |||||||||| ||||||||||| ||||   |    
T  4779436 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 4779535  T
Q  162 aaataattgttggtttt-aataaaaac 187  Q
    |||||||||||| |||| |||||||||    
T  4779536 aaataattgttgtttttcaataaaaac 4779562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 202
Target Start/End: Complemental strand, 17410004 - 17409861
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||| ||| || |||||||||| || |||||||| ||| ||| ||||||  ||||||||||| || ||||||    
T  17410004 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata-aattttttg 17409906  T
Q  160 -ttaaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
      ||||||||||||| |||| || ||||| || ||||| ||||||    
T  17409905 aataaataattgttgtttttcaagaaaaagttactactattagtt 17409861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 33632201 - 33632343
Alignment:
Q  61 gggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||| |||||||||||||||| || |||||||||| || ||| ||||  || ||| ||||||  ||||||||||| |||||||      
T  33632201 gggtttttctatcatgtgcgaatttgcacatgttaaaaagtttaaaatag-aaatttatattgaaacttgtacatttaatattaaatataaaacttttga 33632299  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
     ||||||||||||| |||| || ||||| || ||||| ||||||    
T  33632300 ataaataattgttgtttttcaaaaaaaagttactactattagtt 33632343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 37784878 - 37785001
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||| ||||||||| || || |||||||||| ||| ||||  ||||||  |||||| | |||||||| |||||||||  ||||| ||| ||| ||||     
T  37784878 aatttggacatgttaagaagttcaaaatagtaaatttatattgtaatttgtgcattttatgttaaatatgtaactttttaataaatgattattgtttttc 37784977  T
Q  179 aataaaaacttgctacttttagtt 202  Q
    |||||||| |||||||||||||||    
T  37784978 aataaaaagttgctacttttagtt 37785001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 33288348 - 33288270
Alignment:
Q  100 tttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt 178  Q
    ||||||||||||| ||| ||||| || ||| ||||||||||||||||| |||| |||||   |||||||||||||||||    
T  33288348 tttaaaatagtaaatttatattaaaacttgtacattttgtattaaatacataattttttaacaaataattgttggtttt 33288270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 19838709 - 19838802
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    ||||||||||||||||    |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||||||   |||||||||||||    
T  19838709 aatttgcacatgttaacccgtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttgaataaataattgttg 19838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 16069225 - 16069341
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| || ||| |||||| | |||||||||  |||||| ||||||  ||||||||||| |  |||||  ||||||||||||| ||||     
T  16069225 aatttgcacatgttaagaagttttaaatagaatttttgtattgaaatttgtacatttaatattaaatataaatttttttaataaataattgttgtttttc 16069324  T
Q  179 aataaaaacttgctact 195  Q
    |||||||| || |||||    
T  16069325 aataaaaaattactact 16069341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 23553747 - 23553596
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| |||||||||||||| || |||||| |||||| |||   ||| |||||| |  |||| |||||||||| | | |||||  |     
T  23553747 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatc 23553649  T
Q  163 aataattgttggtttt-aat-aaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||| ||| ||||| || ||| |||||||||||||||||||    
T  23553648 aataattgttggttttcaataaaaaaattactatttttagttaccttaacatg 23553596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 213
Target Start/End: Original strand, 36000040 - 36000091
Alignment:
Q  163 aataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  36000040 aataattgttggttttcaataaaaagttactacttttagttaccttaacatg 36000091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 42479889 - 42479988
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||| |||||||| |||||||| |||||||||||||| |||||||| ||  ||| ||||| || ||| |||  |||||| ||| ||||||||||||||||    
T  42479889 agggattttctatcatgtgcaaatttgcacatgttaagaaatttaatatgataaatttgtcttggaacttgtgcattttatatcaaatatataacttttt 42479988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 13009826 - 13009896
Alignment:
Q  133 attttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    ||||||||||||||||||| ||||||  ||||||||| || ||||| |||||||||||  |||||||||||    
T  13009826 attttgtattaaatatatagctttttagtaaataattattagttttcaataaaaacttaatacttttagtt 13009896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 23438339 - 23438277
Alignment:
Q  57 tttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgt 118  Q
    |||||||||||||||| |||||||| |||||||||||| | || ||||||||||||| |||||    
T  23438339 tttagggtttttctattatgtgcaaatttgcacatgttgagaattttaaaatagtaactttgt 23438277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 25843473 - 25843317
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaa--tttgaacattttgtattaaatatataa-ctttt 157  Q
    ||||||||||| | |||||| |||| | ||||||| || |||||| |||||| ||||| ||||||  ||||  |||||| |||||||||||||| |||||    
T  25843473 ggtttttctatcacgtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgtcttagaacttttgtgcattttatattaaatatataagctttt 25843374  T
Q  158 tgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |   ||||  |||||| |||| |||||||| || |||||||||||| | ||||||||    
T  25843373 taacaaatggttgttgtttttcaataaaaagttactacttttagttgctttaacatg 25843317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 35645043 - 35645145
Alignment:
Q  104 aaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttt----taataaaaacttgctactttta 199  Q
    ||||| ||| ||||||||||| |||   |||||| ||||||||||||||||||||  ||||||||||||  |||    ||| ||||| ||||||||||||    
T  35645043 aaataataaatttgtattagagtttatgcattttatattaaatatataactttttaataaataattgttatttttcaataaaaaaaagttgctactttta 35645142  T
Q  200 gtt 202  Q
    |||    
T  35645143 gtt 35645145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 208
Target Start/End: Original strand, 41415540 - 41415703
Alignment:
Q  48 ctatctttattt--agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaa 144  Q
    ||||||||||||  ||||||||| ||| |||||||| |||||||||| |||||| |||||| |||||| ||||  ||  ||||||    |||| ||||||    
T  41415540 ctatctttattttaagggtttttatatcatgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaa 41415639  T
Q  145 atatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttacctta 208  Q
    |||| || | ||||  ||||||||||||| |||| ||| |||| || |||||||||||| |||||    
T  41415640 atatgtagc-ttttaataaataattgttgattttcaattaaaagttactacttttagttgcctta 41415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 53376405 - 53376534
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaa-tatataactttt 157  Q
    ||||||||| ||| ||||| || |||||||||||||| || |||||||||  || ||||||||| ||  ||  |||||| ||||||| ||||||||||||    
T  53376405 agggtttttttatcatgtgaaaatttgcacatgttaagaagtttaaaataagaagtttgtattaaaacctgtgcattttatattaaattatataactttt 53376504  T
Q  158 tgttaaataattgttggtttt-aataaaaa 186  Q
    |  ||||| ||||||| |||| ||||||||    
T  53376505 taataaatgattgttgtttttcaataaaaa 53376534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 29190815 - 29190966
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  || ||| |||    |||  ||||||||||  ||| |||  |    
T  29190815 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatatgcaacatttaat 29190914  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagttaccttaacat 212  Q
     || |||||||||||||| ||| |||| || ||||||||||||||||||||||    
T  29190915 caa-taattgttggttttcaatgaaaaattactacttttagttaccttaacat 29190966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 203
Target Start/End: Original strand, 44571566 - 44571669
Alignment:
Q  99 atttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaataaaaacttgctactttt 198  Q
    ||||||| |||||  |||||||| ||| ||  ||||||| |||||||||||||| |||||  ||| ||||| ||| |||||||||||| ||| || ||||    
T  44571566 atttaaagtagtagatttgtatttgaacttatacattttatattaaatatataaatttttaataagtaattattgtttttaataaaaagttgata-tttt 44571664  T
Q  199 agtta 203  Q
    |||||    
T  44571665 agtta 44571669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 10389269 - 10389419
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||| ||||||||| || |||||||||||||| |||||| || |||||||||||  |||||| |||    |||| ||| |||||| |||| ||||  |     
T  10389269 tttttttataatgtgtaaatttgcacatgttaaaaaatttcaagtagtaattttgacttagaacttgtgttttttatatgaaatatgtaac-ttttaatc 10389367  T
Q  163 aataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||| ||| |||| ||  |||||||||||||  |||||||    
T  10389368 aataattgttggttttcaattaaaagttaatacttttagttactataacatg 10389419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 41488736 - 41488811
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactt 155  Q
    |||||||||||||||| ||||||||||| |||| ||||| ||| || ||   |||||| ||| |||||||||||||    
T  41488736 aatttgcacatgttaagaaatttaaaattgtaaatttgtcttaaaacttatgcattttatataaaatatataactt 41488811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 54495634 - 54495789
Alignment:
Q  60 agggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||| |||||||||||||||| || |||||| | |||| |||   || ||| |||  |||||  |||||||||| || ||||||    
T  54495634 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagcttttt 54495733  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||||| | ||| |||| || ||||| || |||||||||| || |||||||||    
T  54495734 aataaataagttttgtttttcaaaaaaaaattactacttttagatatcttaacatg 54495789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 23051379 - 23051437
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    ||||||||||||| |||||||| |||||||||| ||| ||||||||| |||||| ||||    
T  23051379 agggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttg 23051437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 3085858 - 3085801
Alignment:
Q  53 tttatttagggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatag 109  Q
    |||| ||||||||||||||| |||||| ||||||||||| |||| || ||||||||||    
T  3085858 tttagttagggtttttctatcatgtgcaaatttgcacattttaagaagtttaaaatag 3085801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 22130728 - 22130636
Alignment:
Q  65 ttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||| |||||||| ||| |||||||||| || |||||||||  ||||||  |||| |||||||| ||||  ||||||||||| |||||||    
T  22130728 ttttctattatgtgcaaatttacacatgttaaaaagtttaaaatataaatttta-attaaaatttgaatatttaatattaaatataaaactttt 22130636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Original strand, 35999945 - 35999997
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaa 112  Q
    |||||||||||| |||||||| |||||||||||||| || |||||| ||||||    
T  35999945 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaa 35999997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 6e-61; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 2571449 - 2571295
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  2571449 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataacttttt 2571350  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2571349 gttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 2571295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 12515471 - 12515625
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| ||||| || |||||||||||||| |||||||||||||||| |||| ||  ||| ||||||||||||||||||||||||||||||||    
T  12515471 agggtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataacttttt 12515570  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12515571 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 12515625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 10307947 - 10307793
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  10307947 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaaatttgcattggaacttgaacattttgtattaaatatataacttttt 10307848  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||    
T  10307847 gttaaataattgttggtttcaataaaaatttgctacttttagttaccttatcatg 10307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 46492343 - 46492495
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||| |||| ||||| ||||||||| |||||| |||| |||  || ||| ||||||||||||||||||||||||  ||  |    
T  46492343 gtttttctatcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataactcgttaat 46492442  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||| |||| ||||||||||| | |||||||||| | ||||||||    
T  46492443 aaataattgttgtttttcaataaaaacttaccacttttagttgctttaacatg 46492495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 51618229 - 51618087
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||||||||||| || ||| |||| |||| |||| ||| ||| ||| |||||||||||||||||||||   |||    
T  51618229 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata---ttt 51618133  T
Q  158 tgttaaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    |  ||||||||||||| |||| | |||||||||||| |||||||||    
T  51618132 taataaataattgttgtttttcagtaaaaacttgctgcttttagtt 51618087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 13495472 - 13495320
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| ||||| || |||||||||| ||| || |||||| |||||||||||  || ||| |||  |||||| |||||||||| ||  |||||  |    
T  13495472 gtttttctatcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaat 13495373  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||||||    
T  13495372 aaataattgttgattttcaataaaaaattactacttttagttaccttaacatg 13495320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 54527707 - 54527817
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||||  ||||||||||| ||| ||| ||||||  ||||||||||| |||||||   ||    
T  54527707 tttttctattatgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataaaacttttgaata 54527806  T
Q  163 aataattgttg 173  Q
    |||||||||||    
T  54527807 aataattgttg 54527817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 2566661 - 2566529
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||||||| |||||||| ||| |||||||||  |||||||||||||||||||||||||  || ||| |||||||||||| |    ||||| |||||     
T  2566661 ggtttttctatcatgtgcaaatttacacatgttagaaaatttaaaatagtaattttgtattgaaacttgtacattttgtattga----ataacattttga 2566566  T
Q  161 taaataattgttggtttt-aataaaaacttgctactt 196  Q
    ||||||||| ||| |||| |||||||||||| |||||    
T  2566565 taaataattcttgtttttcaataaaaacttgttactt 2566529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 26291324 - 26291253
Alignment:
Q  84 tgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactt 155  Q
    |||||||||||  |||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||    
T  26291324 tgcacatgttaggaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactt 26291253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 38389635 - 38389473
Alignment:
Q  53 tttatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatata 151  Q
    |||||| ||||||||||||| |||||||| |||||||||||||| || |||||| | |||||||||  || ||| |||  |||||  |||||||||| ||    
T  38389635 tttattaagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgta 38389536  T
Q  152 actttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||||  ||||||| | ||| |||| |||||||| || |||||||||| || |||||||||    
T  38389535 gctttttaataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatg 38389473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 50204584 - 50204486
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| |||  || ||||||  ||||||||||| |||||||    
T  50204584 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataaaactttt 50204486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 56 - 149
Target Start/End: Complemental strand, 51401625 - 51401531
Alignment:
Q  56 atttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    ||||||||||||||||| |||| ||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  |||||||||||    
T  51401625 atttagggtttttctattatgtacaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatata 51401531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 215
Target Start/End: Original strand, 23638067 - 23638203
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| ||||||||||| |||| || || ||  || |||   ||||| ||||||||||| |||||||| ||||||||||| || ||||     
T  23638067 aatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaactttttattaaataattgatgtttttc 23638166  T
Q  179 aataaaaacttgctacttttagttaccttaacatgca 215  Q
    |||| ||| || ||||||| ||||| |||||||||||    
T  23638167 aatagaaagttactactttaagttaacttaacatgca 23638203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 33474473 - 33474599
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || |||| ||| | ||||||| |||  |||||  |||||||||| ||||||||||| ||||   |    
T  33474473 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 33474572  T
Q  162 aaataattgttggtttt-aataaaaac 187  Q
    |||||||||||| |||| |||||||||    
T  33474573 aaataattgttgtttttcaataaaaac 33474599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 40497224 - 40497074
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| |||||||||| ||| || |||||| |||||| |||   |||||| |||  |||||| |||||| ||| ||  |||||  ||    
T  40497224 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaata 40497125  T
Q  163 aataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    | ||||||||| ||| |||||||| || |||||||||||| ||||||||||    
T  40497124 attaattgttgatttcaataaaaagttactacttttagttgccttaacatg 40497074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 35414809 - 35414925
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||| |||||||||| || || |||||||||| ||| |||| ||| ||| | |||||||||| ||||||||||||||        
T  35414809 gtttttctatcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatatataacttttgaac 35414908  T
Q  162 aaataattgttggtttt 178  Q
    |||||||||||| ||||    
T  35414909 aaataattgttgttttt 35414925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 202
Target Start/End: Original strand, 2379090 - 2379210
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttta 179  Q
    ||||| |||||||||  ||||||||| || ||| |||| |||| || ||| | |||||||||| ||||||| |||||||  ||||||||||||   || |    
T  2379090 aatttacacatgttaggaaatttaaactaataactttgcattaaaacttgtatattttgtatttaatatatgactttttaataaataattgtt--attca 2379187  T
Q  180 ataaaaacttgctacttttagtt 202  Q
    |||||||||| ||||||||||||    
T  2379188 ataaaaacttactacttttagtt 2379210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 42180234 - 42180135
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||| ||||||||| ||||| || |||||||||||||| || |||||||||  ||||||||||| ||| ||| ||||||  ||||||||||| |||||||    
T  42180234 taggatttttctatcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataaaactttt 42180135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 178
Target Start/End: Original strand, 23803064 - 23803162
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt 178  Q
    |||||||||||||||| || |||||||||| ||||||| ||| ||| ||| | ||||  ||||||||||| |||||||   ||||||||||||| ||||    
T  23803064 aatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtatatttcatattaaatataaaacttttgaataaataattgttgttttt 23803162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 26499725 - 26499637
Alignment:
Q  84 tgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||| | ||||  |||||| |||| |||||||   |||||||||||||    
T  26499725 tgcacatgttaagaaatttaaaatag-aattttgtattggaatttgtatatttaatattaagtataaaacttttgaataaataattgttg 26499637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 213
Target Start/End: Complemental strand, 11611088 - 11610941
Alignment:
Q  67 ttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaat 165  Q
    |||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || ||| |||    |||| |||||||||| ||||||||  | ||||    
T  11611088 ttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaat-aaat 11610990  T
Q  166 aattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||| ||| |||| || |||||||||||| ||||||||||    
T  11610989 aattgttggttttcaatgaaaagttactacttttagttgccttaacatg 11610941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 51567821 - 51567928
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| ||||||||||||||    |||||||||| |||||||||||  || ||| ||||||  ||||||||||| |||||||   ||    
T  51567821 tttttctatcatgtgcaaatttgcacatgttaag---tttaaaatagaaattttgtattgaaacttgtacatttactattaaatataaaacttttgaata 51567917  T
Q  163 aataattgttg 173  Q
    |||||||||||    
T  51567918 aataattgttg 51567928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 46492260 - 46492315
Alignment:
Q  114 tttgtattagaatttgaacattttgtattaaatatataactttttgttaaataatt 169  Q
    |||| |||| |||||| ||||||||||||||||||||||||||||  |||||||||    
T  46492260 tttgcattaaaatttgtacattttgtattaaatatataactttttaataaataatt 46492315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 40330292 - 40330378
Alignment:
Q  60 agggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaa 145  Q
    |||||||||| || |||||| |||||| ||||||||| |||||||||||||||||||| | || ||| |||  |||||| |||||||    
T  40330292 agggtttttcaatcatgtgcgaatttgtacatgttaaaaaatttaaaatagtaattttatcttggaacttgttcattttatattaaa 40330378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 45983687 - 45983589
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||||||| ||| |||||||| |||||||| ||||| || |||||||||| |||||| ||||  || ||| ||||||  |||||||||||| ||||||    
T  45983687 agggtttttttatcatgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgtacatttaatattaaatatattactttt 45983589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 8165823 - 8165750
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattt 136  Q
    ||||||||| |||||||| |||||||||||||| || |||||||||  ||||||||||| ||| ||| ||||||    
T  8165823 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatataaattttgtattggaacttgtacattt 8165750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 53718467 - 53718346
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt-tgttaaataattgttg-gttt 177  Q
    |||||||| | ||||| || |||||||||||| |||| | ||| |||||| ||||||| |||||| ||| ||| |||| |  ||||||||| |||  |||    
T  53718467 aatttgcataggttaagaagtttaaaatagtagttttatgttaaaatttgtacattttatattaagtatgtaaattttctaataaataattattgttttt 53718368  T
Q  178 taataaaaacttgctactttta 199  Q
    ||||||||||||||||| ||||    
T  53718367 taataaaaacttgctacattta 53718346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 27549721 - 27549611
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacatttt---gtattaaatatataactttttg 159  Q
    ||||||||| |||||||| |||||||||||||| ||||||| | |||||| ||||| ||| || ||| |||||||    |||||| ||| ||||||||||    
T  27549721 tttttctattatgtgcaaatttgcacatgttaaaaaatttagagtagtaagtttgtcttataacttgtacattttacattattaactatgtaactttttg 27549622  T
Q  160 ttaaataattg 170  Q
      |||||||||    
T  27549621 acaaataattg 27549611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 40930229 - 40930169
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtatta 122  Q
    |||||||||| |||||||| |||||||||||||| || |||||||||| |||||| |||||    
T  40930229 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatatta 40930169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 16875128 - 16875175
Alignment:
Q  166 aattgttggtttt-aataaaaacttgctacttttagttaccttaacat 212  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||||    
T  16875128 aattgttggttttcaataaaaaattactacttttagttaccttaacat 16875175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 38786029 - 38785942
Alignment:
Q  91 gttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt 178  Q
    ||||| || |||||||||| ||||||||||| ||| ||| || |||| ||||||||||| ||||||    ||||||||||||| ||||    
T  38786029 gttaagaagtttaaaatagaaattttgtattggaacttgtacgttttatattaaatataaaactttcaaataaataattgttgttttt 38785942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 23523127 - 23523069
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||| | |||||||||    
T  23523127 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttg 23523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 31318818 - 31318732
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    ||||||||| ||||| || |||||||||||||| || ||||| |||| ||||||| ||| ||| ||| ||||||  |||||||||||    
T  31318818 tttttctatcatgtgaaaatttgcacatgttaagaagtttaagatagaaattttgcattggaacttgtacatttaatattaaatata 31318732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 37332290 - 37332196
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||| ||| |||||||| ||| |||||||| ||||||||||||| |||| ||||| ||  ||||||   ||||| |||||||||||||| ||||    
T  37332290 tttttttattatgtgcaaatttacacatgttgataaatttaaaatggtaagtttgtctttaaatttgtgtattttatattaaatatataattttt 37332196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 38277493 - 38277447
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaat 126  Q
    |||||||||||||||| || |||||||||| ||||||||||| ||||    
T  38277493 aatttgcacatgttaagaagtttaaaatagaaattttgtattggaat 38277447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 20938235 - 20938083
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttg-tattaaatatataactttttgt 160  Q
    |||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || ||| |||    ||||  |||||||||| ||| |||||      
T  20938235 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaa-tttttaa 20938137  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | |||||||||| ||||| |||||||| ||  ||||||||||||||||||||||    
T  20938136 tcaataattgttagttttcaataaaaagttattacttttagttaccttaacatg 20938083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 49396559 - 49396462
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||  |||||||| |||| |||| |||| || |||||| |||||| |||| |||| |||||   |||||| ||||||||||||||| ||||    
T  49396559 ggtttttctaccatgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatatataacctttt 49396462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 3863509 - 3863457
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaa 112  Q
    |||||||||||| |||||||| |||||||||||||| || |||||| ||||||    
T  3863509 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaa 3863457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 37444221 - 37444173
Alignment:
Q  165 taattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||| ||| |||||||| || |||||||||||| ||||||||||    
T  37444221 taattgttgatttcaataaaaagttactacttttagttgccttaacatg 37444173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 38786343 - 38786379
Alignment:
Q  81 atttgcacatgttaataaatttaaaatagtaattttg 117  Q
    ||||||||||||||| || ||||||||||||||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttg 38786379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 41541334 - 41541410
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttt 156  Q
    |||||||||||| ||| || ||||||||||||| ||| ||||  || ||| ||||||  |||||||||| |||||||    
T  41541334 aatttgcacatgataaaaagtttaaaatagtaaatttatattgaaacttgtacatttaatattaaatatgtaacttt 41541410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 1e-59; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 33017907 - 33017751
Alignment:
Q  58 ttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttt 156  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||  ||| ||||||||||||||||||||||||||||||    
T  33017907 ttagggtttttctattatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttgcataggaacttgaacattttgtattaaatatataacttt 33017808  T
Q  157 ttgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33017807 ttgttaaataattgttggttttaataaaaacttgctaattttagttaccttaacatg 33017751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 28943765 - 28943920
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||    
T  28943765 tagggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttt 28943864  T
Q  158 tgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  28943865 tgttaaataattgttggtttcaataaaaacttgctacttttaattaccttaacatg 28943920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 14228124 - 14228277
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||||    
T  14228124 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttttg 14228223  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  14228224 ttaaataattgttggtttcaataaaaacttgctacttttaattaccttaacatg 14228277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 17552584 - 17552738
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| || ||| ||| |||||||||||||||||||||||||| |||||    
T  17552584 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattatgcattggaacttgaacattttgtattaaatatataatttttt 17552683  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  17552684 gttaaataattgttggtttcgataaaaacttgctacttttagttaccttaacatg 17552738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 30591163 - 30591315
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||| |||||||||| || ||| |||| ||||||||| |||  || ||| | |||||||||||||| |||||||||||| |    
T  30591163 gtttttctatcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgtataactttttgat 30591262  T
Q  162 aaataattgt-tggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||| |  ||| ||||||||||| |||| ||||||| | ||||||||    
T  30591263 aaataattgtattttttcaataaaaacttactacatttagttgcgttaacatg 30591315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 34692534 - 34692437
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||||||    
T  34692534 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaactttt 34692437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 2830670 - 2830832
Alignment:
Q  53 tttattta-gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatat 150  Q
    |||||||| |||||||||||| |||| ||| |||||||||||||| || ||||||||| ||| |||   ||||||||||    |||| |||||||||| |    
T  2830670 tttatttatgggtttttctatcatgtacaaatttgcacatgttaagaagtttaaaataataactttaatttagaatttgtgttttttatattaaatatgt 2830769  T
Q  151 aactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | |||||  | || |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  2830770 agcttttaatcaa-taattgttggttttcaatgaaaagttactacttttagttaccttaacatg 2830832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 8977467 - 8977618
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| ||||| || ||||||| |||||| || || |||||||||| ||||||||  || |||  |||||| |||||||||| ||||||||   ||    
T  8977467 tttttctatcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaacttttcaata 8977566  T
Q  163 aataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||| ||||||| |||| ||| |||  ||||||||||||||| ||||||||||    
T  8977567 aatgattgttgtttttcaattaaaggttgctacttttagtttccttaacatg 8977618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 31069583 - 31069733
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| ||| |||||||||| || |||||| |||||| ||||  || ||| |||    |||| |||||||||| |||| |||  | |    
T  31069583 tttttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatca 31069682  T
Q  163 aataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  31069683 a-taattgttggttttcaataaaaacttactacttttagttaccttaacatg 31069733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 10887207 - 10887055
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || |||||| | |||||||||  || ||| |||   ||||| |||||||||| || ||||||  |    
T  10887207 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttttaat 10887108  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||| | ||| |||| |||||||| || |||||||||| || |||||||||    
T  10887107 aaataagttttgtttttcaataaaaaattactacttttagatatcttaacatg 10887055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 169
Target Start/End: Original strand, 23936394 - 23936483
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataatt 169  Q
    |||||||||||||||| || ||||| ||||||| ||| | || ||| ||| ||||||| ||||||||| ||||||||||  |||||||||    
T  23936394 aatttgcacatgttaacaagtttaacatagtaactttcttttggaacttgtacattttatattaaatacataactttttaataaataatt 23936483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 17141435 - 17141315
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg-gtttt 178  Q
    |||||||| ||||||| |  ||||| ||||||||||||| |||||| |||  |||||| |||||||||| || ||||||  ||||| |||||||  ||||    
T  17141435 aatttgcatatgttaagatgtttaagatagtaattttgtcttagaacttgctcattttatattaaatatgtagctttttaataaattattgttgtttttt 17141336  T
Q  179 aataaaaacttgctactttta 199  Q
    |||||||| |  |||||||||    
T  17141335 aataaaaagtaactactttta 17141315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 4372017 - 4371907
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| ||| |||| ||| |||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||| ||| |||||||   |    
T  4372017 gtttttctatcatgcgcaaatttacacatgttaagaagtttaaaatagaaattttgtatt-gaacttgcacatttaatattaaagataaaacttttgaat 4371919  T
Q  162 aaataattgttg 173  Q
    ||||||||||||    
T  4371918 aaataattgttg 4371907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 6017038 - 6016895
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||| ||||||||| |||||||| |||||||||||||| || |||||| | |||| ||||  || ||| |||  |||||  |||||||||||||||||||    
T  6017038 taggatttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttt 6016939  T
Q  158 tgttaaataattgttggtttt-aataaaaacttgctacttttag 200  Q
    |   |||||| ||||| |||| ||| |||| || ||||||||||    
T  6016938 taaaaaataagtgttgtttttcaatgaaaagttactacttttag 6016895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 18332686 - 18332840
Alignment:
Q  61 gggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||| ||||| |||||||||| || |||||| |  ||||||||  || ||| ||   |||||  ||||||||||||| ||||||     
T  18332686 gggtttttctatcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatatatagcttttta 18332785  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||||| | ||| |||| |||||||| || |||||||||| || |||||||||    
T  18332786 ataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatg 18332840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 202
Target Start/End: Complemental strand, 30623477 - 30623363
Alignment:
Q  89 atgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaac 187  Q
    ||||||| || |||||||||| |||||||||||  || ||| ||||||  ||||||||||| |||||||   ||||||||||||| |||| || |||||     
T  30623477 atgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttgatattaaatataaaacttttgaataaataattgttgtttttcaagaaaaag 30623378  T
Q  188 ttgctacttttagtt 202  Q
    || ||||| ||||||    
T  30623377 ttactactattagtt 30623363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 31169761 - 31169879
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| ||||| || |||||||||||||| ||||||||| |||||| ||||  || ||| |||  |||||| |||||||||| ||  |||||     
T  31169761 gggtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtaggttttta 31169860  T
Q  160 ttaaataattgttggtttt 178  Q
     ||| ||||| ||||||||    
T  31169861 ataattaattattggtttt 31169879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 3853123 - 3853066
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||| |||||| ||||    
T  3853123 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttg 3853066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 203
Target Start/End: Original strand, 1017796 - 1017920
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    ||||| |||||||||| || |||||| |||||| ||||  ||  || |||  |||||| |||||||||| ||| |||||  ||||||||||||||||||     
T  1017796 aatttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataattgttggttttc 1017895  T
Q  179 aataaaaacttgctacttttagtta 203  Q
    ||  |||| || |||||||||||||    
T  1017896 aacgaaaagttactacttttagtta 1017920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 3261261 - 3261193
Alignment:
Q  58 ttagggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaa 125  Q
    ||||||||||||||| |||||| ||||| |||||||||| || |||||||||| || |||| |||||||    
T  3261261 ttagggtttttctatcatgtgcaaatttacacatgttaaaaagtttaaaatagaaactttgcattagaa 3261193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 17596521 - 17596385
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||| ||||| ||| || |||||| |||||| ||||  || ||| |||  |||||| |||||| ||| ||  |||||     
T  17596521 gggtttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgcattttatattaactatgtagattttta 17596422  T
Q  160 ttaaataattgttggttttaataaaaacttgctactt 196  Q
     ||| ||||||||||||| |||||||| || ||||||    
T  17596421 ataattaattgttggtttcaataaaaagttactactt 17596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 29863301 - 29863409
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||||||| |||||||| |||||||||||||| || |||||||||||||  |||| |  ||| ||   |||||| |||||| |||| ||||||||      
T  29863301 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataaaactttttaa 29863400  T
Q  161 taaataatt 169  Q
    |||||||||    
T  29863401 taaataatt 29863409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 151
Target Start/End: Complemental strand, 31503919 - 31503831
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatata 151  Q
    ||||||||  |||||||| |||||||||||||| ||||||||| |||||| ||| |||| ||| |||   ||||| |||||||||||||    
T  31503919 tttttctaatatgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatatata 31503831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 28757506 - 28757613
Alignment:
Q  82 tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaat 181  Q
    ||||||||| |||| || ||| ||||||||| |||| ||| ||| ||| |  |||| |||||||| |||||||||||  |||||||||| |  ||| |||    
T  28757506 tttgcacatattaaaaagttttaaatagtaactttgcatttgaagttgtaatttttttattaaatgtataactttttaataaataattgattttttcaat 28757605  T
Q  182 aaaaactt 189  Q
    ||||||||    
T  28757606 aaaaactt 28757613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 29065424 - 29065483
Alignment:
Q  62 ggtttttctataatgtgcaat-ttgcacatgttaataaatttaaaatagtaattttgtat 120  Q
    ||||||||||| ||||||||  ||||||||||||| || |||||||||||||| ||||||    
T  29065424 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtat 29065483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 29120277 - 29120336
Alignment:
Q  62 ggtttttctataatgtgcaat-ttgcacatgttaataaatttaaaatagtaattttgtat 120  Q
    ||||||||||| ||||||||  ||||||||||||| || |||||||||||||| ||||||    
T  29120277 ggtttttctatcatgtgcaaacttgcacatgttaaaaagtttaaaatagtaatattgtat 29120336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 27819627 - 27819752
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||| ||| |||||||||||||| || |||||||| ||| |||||| ||| || ||   |||||| || ||||||| |||||||||  |    
T  27819627 gtttttctatcatgtacaaatttgcacatgttaagaagtttaaaattgtatttttgtcttaaaacttattcattttatactaaatatgtaactttttaat 27819726  T
Q  162 aaataattgttggtttt-aataaaaa 186  Q
    ||||   |||||||||| ||||||||    
T  27819727 aaattgatgttggttttcaataaaaa 27819752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 157
Target Start/End: Original strand, 28759032 - 28759109
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||||| || |||  |||| ||| |||| |||| || ||| | |||||||||||||| ||||||||||    
T  28759032 aatttgcacatgttaagaagttttgaataataactttgcattaaaagttgtatattttgtattaaatgtataactttt 28759109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 5362996 - 5363044
Alignment:
Q  166 aattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  5362996 aattgttggttttcaatgaaaagttactacttttagttaccttaacatg 5363044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 10671598 - 10671689
Alignment:
Q  64 tttttctataatgtgcaatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttt 156  Q
    ||||||||| || ||||||| ||||||||||| |  || |||||||||| ||||| || ||| ||  |||||||| ||||||||||| |||||    
T  10671598 tttttctatcatttgcaatt-gcacatgttaagatgttcaaaatagtaagtttgttttggaacttatacattttgcattaaatatatgacttt 10671689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 22974645 - 22974724
Alignment:
Q  134 ttttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||| |||||||||| ||||||||  | || ||||||||| |||| ||| |||| || |||||||||||||||||||||||    
T  22974645 ttttatattaaatatgtaacttttaatcaa-taattgttgattttcaatgaaaagttactacttttagttaccttaacatg 22974724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 23813756 - 23813677
Alignment:
Q  134 ttttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||| |||||||||| ||||||||  | || ||||||||| |||| ||| |||| || |||||||||||||||||||||||    
T  23813756 ttttatattaaatatgtaacttttaatcaa-taattgttgattttcaatgaaaagttactacttttagttaccttaacatg 23813677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 31568288 - 31568232
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    ||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||    
T  31568288 ggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttg 31568232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 4e-59; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 7757782 - 7757937
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| ||| |||||||||| |||||||||||||||| |||| ||| ||| |||||||||||||||||||||||||||||||    
T  7757782 tagggtttttctatcatgtgcaaatttacacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataactttt 7757881  T
Q  158 tgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7757882 tgttaaataattgttggttttaataaaaacttgttacttttagttaccttaacatg 7757937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 5583555 - 5583709
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| ||| |||| |||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||||||||||||||||||||||    
T  5583555 agggtttttctatcatgcgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgtattaaatatataacttttt 5583654  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5583655 gttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 5583709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 38248417 - 38248570
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||| |||||    
T  38248417 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaattttacattggaacttgaacattttgtattaaatatataatttttt 38248516  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  38248517 gttaaataattgttggttttaataaaaacttgcta-ttttagttaccttaacatg 38248570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 213
Target Start/End: Original strand, 34213950 - 34214103
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtatt--aaatatataactttttgt 160  Q
    |||||||||  ||||||| |||||||||||||| ||||||||||||||||||||  ||| ||| ||||||||||| ||||  |||||||||||||||| |    
T  34213950 tttttctatcgtgtgcaaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaatatataactttttat 34214049  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||||||||||||||| ||||||||||| ||| |||||||| | ||||||||    
T  34214050 aaaataattgttggttttcaataaaaacttactatttttagttgctttaacatg 34214103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 24729574 - 24729725
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||||||| | |||||||||||| || ||||||||||    
T  24729574 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgtatattttgtattaattacataacttttt 24729673  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaa 209  Q
      ||||||||| ||  |||| |||||||| || ||| |||||||||| ||||    
T  24729674 aataaataattatttattttcaataaaaatttactatttttagttactttaa 24729725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 15411611 - 15411774
Alignment:
Q  52 ctttatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatat 150  Q
    ||||| |||||| |||||||  |||||||| |||||||||||||| || ||||||||||||| ||||| ||  || |||  |||||| |||||||||| |    
T  15411611 ctttacttaggggttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgt 15411710  T
Q  151 aactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | ||||||  ||||| ||||||| |||| |||||||| || |||||||||||||| ||||||||    
T  15411711 agctttttaataaattattgttgtttttcaataaaaaattactacttttagttactttaacatg 15411774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 17234956 - 17235034
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||| |||||||||| ||||    
T  17234956 aatttgcacatgttaagaaatttaaaatagtaattttgtattggaatttgtatattttgtatttaatatataacctttt 17235034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 40503054 - 40503119
Alignment:
Q  135 tttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctactttta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  40503054 tttgtattaaatatataactttttgttaaataattgttggttttcaataaaaacttgttactttta 40503119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 178
Target Start/End: Complemental strand, 9450438 - 9450319
Alignment:
Q  60 agggtttttctataatgtgcaatt-tgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| | |||||||||||| ||||||||| |||||  |||||||| |||||||   ||||| |||||||||||||| |||||    
T  9450438 agggtttttctatcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataatttttt 9450339  T
Q  159 gttaaataattgttggtttt 178  Q
      ||||||||||||| ||||    
T  9450338 aataaataattgttgttttt 9450319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 9747497 - 9747343
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| ||| |||||||||| || ||||||||||||||||||| || ||| |||  |||||| |||||||||| || ||||||     
T  9747497 gggtttttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagctttttt 9747398  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||| |||||| |||| |||||| | || |||||||||||||  ||||||||    
T  9747397 acaaatagttgttgtttttcaataaatagttactacttttagttaatttaacatg 9747343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 151
Target Start/End: Original strand, 29157826 - 29157918
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatata 151  Q
    ||||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||| ||| ||| ||| | |||||||||||||||||||    
T  29157826 agggtttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgtattaaatatata 29157918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 19228601 - 19228452
Alignment:
Q  65 ttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaa 163  Q
    |||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  || ||| |||    ||||||||||||||| ||||||||  | ||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaa 19228502  T
Q  164 ataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  19228501 -taattgttggttttcaatgaaaagttactacttttagttaccttaacatg 19228452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 26229883 - 26230004
Alignment:
Q  91 gttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaataaaaacttg 190  Q
    ||||| || ||||||||||||| ||||  ||| |||||  |  |||| |||||||||| ||||||||  | || |||||||||||||||||||||| ||     
T  26229883 gttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatatgtaacttttaatcaa-taattgttggttttaataaaaaatta 26229981  T
Q  191 ctacttttagttaccttaacatg 213  Q
    |||||||||||||||||||||||    
T  26229982 ctacttttagttaccttaacatg 26230004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 11660946 - 11661059
Alignment:
Q  89 atgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaataaaaact 188  Q
    ||||||| || ||| ||||||||| |||| ||| ||| ||| | |||||||||||||| |||||||||||  ||||||||||||   || |||||||| |    
T  11660946 atgttaagaagttttaaatagtaactttgcattggaacttgtatattttgtattaaatgtataactttttaataaataattgttttattcaataaaaatt 11661045  T
Q  189 tgctacttttagtt 202  Q
    ||||||||||||||    
T  11661046 tgctacttttagtt 11661059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 12016847 - 12016693
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| ||||||||| |||| || |||||| ||||||||||   || ||| |||    |||| |||||||||| || |||||     
T  12016847 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagctttta 12016748  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | || |||||||||||||| |||||||| || |||||||||||||||||||||||    
T  12016747 atcaa-taattgttggttttcaataaaaagttactacttttagttaccttaacatg 12016693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 27665041 - 27665195
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || ||| |||    |||| |||||||||| ||||||||     
T  27665041 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaactttta 27665140  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | ||||||||||||||||| ||| |||| || |||||||||||| ||||||||||    
T  27665141 at-aaataattgttggttttcaatgaaaagttactacttttagttgccttaacatg 27665195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 4576323 - 4576421
Alignment:
Q  60 agggtttttctataatgtgcaattt-gcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||||||||||| |||||||| || ||| ||||||| ||||||||||||| |||||||||||  || ||| ||||||  ||||||||||| |||||||    
T  4576323 agggtttttctatcatgtgcaaattcgcatatgttaagaaatttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaactttt 4576421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 5853463 - 5853589
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || |||| ||| | ||||||| |||  |||||  |||||||||| ||||||||||| ||||   |    
T  5853463 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 5853562  T
Q  162 aaataattgttggtttt-aataaaaac 187  Q
    |||||||||||| |||| |||||||||    
T  5853563 aaataattgttgtttttcaataaaaac 5853589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 16493532 - 16493658
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || |||| ||| | ||||||| |||  |||||  |||||||||| ||||||||||| ||||   |    
T  16493532 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 16493631  T
Q  162 aaataattgttggtttt-aataaaaac 187  Q
    |||||||||||| |||| |||||||||    
T  16493632 aaataattgttgtttttcaataaaaac 16493658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 40562095 - 40562229
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| || ||||||||| ||| |||| |||  || ||  | |||||||||| ||||||||||| |||  ||||||||||||| ||||     
T  40562095 aatttgcacatgttaaaaagtttaaaatattaactttgcattgaaacttttatattttgtatttaatatataactctttaataaataattgttgattttc 40562194  T
Q  179 aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||| || ||||||  ||| ||||||||    
T  40562195 aataaaaacttactgcttttaactactttaacatg 40562229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 136
Target Start/End: Complemental strand, 8065304 - 8065227
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattt 136  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||| |||||| |||| ||||||| ||||||    
T  8065304 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaatttgtacattt 8065227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 173
Target Start/End: Complemental strand, 43806520 - 43806427
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    |||||||||||||||| || |||||||||| |||||||||||  || ||| ||||||  ||||||||||| |||||||   |||||||||||||    
T  43806520 aatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgttg 43806427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 103 - 213
Target Start/End: Complemental strand, 45302477 - 45302365
Alignment:
Q  103 aaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg--gttttaataaaaacttgctacttttag 200  Q
    |||||||||| |||||||||||||||   |||||| |||||||||||||| |||||  ||||||||| |||   |||||||||||||||  ||||||| |    
T  45302477 aaaatagtaagtttgtattagaatttatgcattttatattaaatatataattttttaataaataattattgtttttttaataaaaacttattactttttg 45302378  T
Q  201 ttaccttaacatg 213  Q
    || | ||||||||    
T  45302377 tttctttaacatg 45302365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 20566017 - 20566169
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||| |||||||||| || |||||| || ||  |||||||| ||| |||   ||||| ||||||||| ||||  ||||  |    
T  20566017 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataatattttaat 20566116  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||| |||| |||||| | |||||| |||||||||| ||||||||    
T  20566117 aaataattgttgtttttcaataaatagttgctatttttagttactttaacatg 20566169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 187
Target Start/End: Complemental strand, 25948199 - 25948091
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| ||||||| ||| | ||||||| |||  |||||  |||||||||| ||||||||||| ||||   ||||||||||||| ||||     
T  25948199 aatttgcacatgttaagaaatttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaataaataattgttgtttttc 25948100  T
Q  179 aataaaaac 187  Q
    |||||||||    
T  25948099 aataaaaac 25948091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 147
Target Start/End: Original strand, 26003348 - 26003431
Alignment:
Q  65 ttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaata 147  Q
    |||||||| |||||||| |||||||||||||| || |||||||||| |||||||||||  |||||| ||||||  |||||||||    
T  26003348 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaatttgtacatttgatattaaata 26003431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 187
Target Start/End: Complemental strand, 22704715 - 22704589
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||||||||| |||| || |||| ||| | ||||||| |||  |||||  |||||||||| ||||||||||| ||||   |    
T  22704715 gtttttctatcatgtgcaaatttgcacatcttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 22704616  T
Q  162 aaataattgttggtttt-aataaaaac 187  Q
    |||||||||||| |||| |||||||||    
T  22704615 aaataattgttgtttttcaataaaaac 22704589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 202
Target Start/End: Complemental strand, 7720293 - 7720152
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||||||| |||||| || ||||| |||| ||||||||||| |||  || ||| || |||||||||||  |||||||   |    
T  7720293 gtttttctatcatgtgcaaatttgcacgtgttaaaaagtttaagatagaaattttgtattggaacgtgtacacttagtattaaatattaaacttttgaat 7720194  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    |||||||||||| |||| || ||||| || ||||| ||||||    
T  7720193 aaataattgttgtttttcaaaaaaaagttactactattagtt 7720152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 16126556 - 16126710
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||| |||||| |||   ||  || |||    |||| |||||||||| || |||||     
T  16126556 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagctttta 16126655  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | || |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  16126656 atcaa-taattgttggttttcaatgaaaaattactacttttagttaccttaacatg 16126710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 25997999 - 25998154
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| | |||||| ||||||  |||||| ||| |||||| | |||||||| ||| ||| |||  |||||  || ||||||| || ||||||    
T  25997999 agggtttttctatcacgtgcaaatttgcatgtgttaaaaaaattaaaaaattaattttgcattggaacttgttcatttaataataaatatgtatcttttt 25998098  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||||||||||| |||| |||||||| ||   |||||||||||| ||||||||    
T  25998099 aataaataattgttgtttttcaataaaaagttttcacttttagttactttaacatg 25998154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 2051721 - 2051651
Alignment:
Q  133 attttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    ||||| |||||||||| ||| |||||  ||||||||||||| |||| ||||||||||||||| ||||||||    
T  2051721 attttatattaaatatttaaatttttaataaataattgttgtttttcaataaaaacttgctaattttagtt 2051651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 23932743 - 23932633
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||| || |||| || |||||||||||||  ||||||  ||| |||  |||||| |||||| |||| ||||||||  |    
T  23932743 gtttttctatcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaactttttaat 23932644  T
Q  162 aaataattgtt 172  Q
    |||||||||||    
T  23932643 aaataattgtt 23932633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 199
Target Start/End: Complemental strand, 45062376 - 45062238
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| ||||||||| |||| || || |||||||||| ||| | || ||| |||  |||||| ||||||| || |||||||||  |    
T  45062376 gtttttctatcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaactttttaat 45062277  T
Q  162 aaataattgttg-gttttaataaaaacttgctactttta 199  Q
    |||||||| |||  |||||||||||| || | |||||||    
T  45062276 aaataatttttgttttttaataaaaagttaccactttta 45062238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 22162147 - 22162228
Alignment:
Q  132 cattttgtattaaatatataactttttgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||| |||||| ||| ||  |||||  ||| ||||||||||||| |||||||| || |||||||||||| ||||||||||    
T  22162147 cattttatattaactatgtagatttttaataattaattgttggtttcaataaaaagttactacttttagttgccttaacatg 22162228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 34817649 - 34817580
Alignment:
Q  134 ttttgtattaaatatataactttttgttaaataattgttggttttaataaaaacttgctacttttagtta 203  Q
    |||| ||||||||||||||||||||  ||||||||||||| ||| |||||| | ||| || |||||||||    
T  34817649 ttttttattaaatatataactttttaataaataattgttgttttcaataaatagttgatatttttagtta 34817580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 41771209 - 41771140
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    ||||| |||||||||  ||||||||||||  ||||||||||||||| ||| ||||||  |||||||||||    
T  41771209 aatttacacatgttatgaaatttaaaataaaaattttgtattagaacttgtacatttaatattaaatata 41771140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 14377503 - 14377451
Alignment:
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||| |||||||| || |||||||||||| ||||||||||    
T  14377503 aaataattgttggttttcaataaaaagttactacttttagttgccttaacatg 14377451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 213
Target Start/End: Original strand, 16919226 - 16919305
Alignment:
Q  134 ttttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||| |||||||||| ||||||||  | || |||||||||||||| || ||||| || |||||||||||||||||||||||    
T  16919226 ttttatattaaatatgtaacttttaatcaa-taattgttggttttcaacaaaaagttactacttttagttaccttaacatg 16919305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 22705560 - 22705481
Alignment:
Q  134 ttttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||| |||||||||| |||||||   |||| |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  22705560 ttttatattaaatatgtaactttaaattaa-taattgttggttttcaatgaaaagttactacttttagttaccttaacatg 22705481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 29142255 - 29142111
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| ||| |||||||| | || ||||| |||| |||||||||||  || ||| ||||||  ||||||||||| || ||||     
T  29142255 agggtttttctatcatgtgcaaatttacacatgtttagaagtttaatatagaaattttgtattttaacttgtacatttaatattaaatataaaatttttg 29142156  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
      ||| ||||||||| |||| || ||||| || ||||| ||||||    
T  29142155 aataagtaattgttgtttttcaagaaaaagttactactattagtt 29142111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 13351229 - 13351363
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| || |||||| |||||| ||||  |||||| |||    |||| |||| ||||| ||||||||  |||| ||||||||| ||||     
T  13351229 aatttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgtaacttttaattaa-taattgttgattttc 13351327  T
Q  179 aataaaaacttg-ctacttttagttaccttaacatg 213  Q
    ||||||||  |  |||||||||||||||||||||||    
T  13351328 aataaaaaaataactacttttagttaccttaacatg 13351363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 117
Target Start/End: Complemental strand, 17265586 - 17265527
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    |||||||||||||| |||| ||| ||||||| |||||| |||||||||||||||| ||||    
T  17265586 tagggtttttctatcatgtccaaatttgcacttgttaagaaatttaaaatagtaactttg 17265527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 36731361 - 36731262
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| ||||| || ||| |||||||||| ||||||||||| |||| ||||| |||||| |||   ||| | ||||||||| |||| |||||    
T  36731361 agggtttttctatcatgtgtaaatttacacatgttaagaaatttaaaatggtaaatttgtcttagaacttgtgtattctatattaaatagataatttttt 36731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 36612757 - 36612883
Alignment:
Q  88 catgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttt-taataaaaa 186  Q
    |||||||| || |||||||||  |||||||||||| || ||| ||||||  ||||||||||| |||||||   ||||||| ||||| |||  || |||||    
T  36612757 catgttaagaagtttaaaataaaaattttgtattaaaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaa 36612856  T
Q  187 cttgctacttttagttaccttaacatg 213  Q
     || ||||| |||||||  ||||||||    
T  36612857 gttactactattagttattttaacatg 36612883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 36620608 - 36620734
Alignment:
Q  88 catgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttt-taataaaaa 186  Q
    |||||||| || |||||||||  |||||||||||| || ||| ||||||  ||||||||||| |||||||   ||||||| ||||| |||  || |||||    
T  36620608 catgttaagaagtttaaaataaaaattttgtattaaaacttgtacatttaatattaaatataaaacttttgaataaataaatgttgttttccaaaaaaaa 36620707  T
Q  187 cttgctacttttagttaccttaacatg 213  Q
     || ||||| |||||||  ||||||||    
T  36620708 gttactactattagttattttaacatg 36620734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 15232009 - 15231904
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || |||||| | |||| ||||  ||| || |||  |||||  |||||||||| |||||||||  |    
T  15232009 gtttttctattatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaactttttaat 15231910  T
Q  162 aaataa 167  Q
    ||||||    
T  15231909 aaataa 15231904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 26129135 - 26129216
Alignment:
Q  91 gttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgtt 172  Q
    ||||| ||||||||||||  ||||||||||| ||  ||| ||||||  ||||||||||| |||||||   ||||||||||||    
T  26129135 gttaagaaatttaaaataaaaattttgtattggatattgtacatttaatattaaatataaaacttttgaataaataattgtt 26129216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 37471758 - 37471851
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    |||||||||||||||| || ||||||||||||| ||||| ||  || |||  |||||| |||||||||| ||  |||||  ||||| |||||||    
T  37471758 aatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgttg 37471851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 6e-58; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 2161567 - 2161414
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  2161567 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttgaattaaatatataactttttg 2161468  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2161467 ttaaataattgttggtttcaataaaaacttgctacttttagttaccttaacatg 2161414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 3306052 - 3306206
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| |||  || ||||||||||||||| ||||||||||||||||    
T  3306052 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtatcaaatatataacttttt 3306151  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  3306152 gttaaataattgttggtttcaataaaaacttactacttttagttaccttaacatg 3306206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 26363987 - 26364141
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| ||||| |||||||| |||||||||||||||| |||| ||| ||| ||||||||||| |||||| | |||||||||||    
T  26363987 agggtttttctatcatgtgcaaatttgcgcatgttaagaaatttaaaatagtaactttgcattggaacttgaacattttctattaattgtataacttttt 26364086  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  26364087 gttaaataattgttgattttaataaaaactttctacttttagttaccttaacatg 26364141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 12132164 - 12132009
Alignment:
Q  60 agggtttttctataatgtgcaat-ttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| || |||||  ||||||||||||| ||||||||| |||||| |||||||| ||| ||||||||||| ||||||||||||||||||||    
T  12132164 agggtttttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataacttttt 12132065  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      |||||| |||| | |||| |||||||| ||||||||||||||| | ||||||||    
T  12132064 aataaatacttgtggtttttcaataaaaagttgctacttttagtttctttaacatg 12132009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 5573466 - 5573314
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||| ||||||||| || ||||||||| || ||||| ||||||| ||  ||||||||||||  ||||||||||||||     
T  5573466 gggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaataatacttttgcattagaacttatacattttgtatt--atatataacttttta 5573369  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||| ||||||| |||| |||||||||||| || |||||||||  ||||||||    
T  5573368 ataaatgattgttgtttttcaataaaaacttgttatttttagttattttaacatg 5573314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 28014855 - 28014981
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| ||| ||| ||||||  ||||||||||| |||||||     
T  28014855 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaacttttg 28014954  T
Q  159 gttaaataattgttggttttaataaaaa 186  Q
      |||||||||||| ||||||| |||||    
T  28014955 aataaataattgtt-gttttaaaaaaaa 28014981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 20514814 - 20514703
Alignment:
Q  60 agggtttttctataatgtgca-atttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||| |||||||| ||||||| ||||||||| ||||| ||||||||||| |||| ||||| || ||| ||| ||||||| ||||||||||||||||||||    
T  20514814 aggggttttctatcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatatataacttttt 20514715  T
Q  159 gttaaataattg 170  Q
      ||||||||||    
T  20514714 aataaataattg 20514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 186
Target Start/End: Original strand, 27874678 - 27874804
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||  ||||||||||| ||| ||| ||||||  ||||||||||| |||||||     
T  27874678 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatacaaattttgtattggaacttgtacatttaatattaaatataaaacttttg 27874777  T
Q  159 gttaaataattgttggttttaataaaaa 186  Q
      |||||||||||| ||||||| |||||    
T  27874778 aataaataattgtt-gttttaaaaaaaa 27874804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 26682249 - 26682105
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||| |||||| ||||  || ||| |||  |||||| |||||||| | || ||||||    
T  26682249 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagcttttt 26682150  T
Q  159 gttaaataattgttggttttaat-aaaaacttgctacttttagtt 202  Q
      ||||||||||||| ||| ||| ||||| || ||||||||||||    
T  26682149 aataaataattgttgttttcaataaaaaaattactacttttagtt 26682105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 158
Target Start/End: Original strand, 14961660 - 14961759
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||| ||| || |||||||||||||||||||||| ||| |||  ||||||  ||||||||| |||||||||    
T  14961660 agggtttttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgcattttaaattaaatatttaacttttt 14961759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 7140456 - 7140610
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| ||||||||| |||| || |||||| ||||||||||   || ||| |||    |||| |||||||||| ||  |||||    
T  7140456 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtag-ttttt 7140554  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      | |||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  7140555 aatcaataattgttggttttcaataaaaagttactacttttagttaccttaacatg 7140610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 207
Target Start/End: Original strand, 39024855 - 39025002
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || |||||||  |||||| |||||| ||| ||  |||||     
T  39024855 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgtagattttta 39024954  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttacctt 207  Q
     ||| ||||||||||||| |||||||| ||  ||||||||||| ||||    
T  39024955 ataattaattgttggtttcaataaaaagttattacttttagttgcctt 39025002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 14816124 - 14816277
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||| ||| ||||||||| |||||| ||||  ||| || |||   ||||  |||||||||| ||| |||||     
T  14816124 gggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattta-tattaaatatgtaaattttta 14816222  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||| |||||||||||||| |||||||| || |||||||||||| | ||||||||    
T  14816223 ataattaattgttggttttcaataaaaagttactacttttagtttctttaacatg 14816277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 14829616 - 14829463
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||| ||| ||||||||| |||||| ||||  ||| || |||   ||||  |||||||||| ||| |||||     
T  14829616 gggtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattta-tattaaatatgtaaattttta 14829518  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||| |||||||||||||| |||||||| || |||||||||||| | ||||||||    
T  14829517 ataattaattgttggttttcaataaaaagttactacttttagtttctttaacatg 14829463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 34741691 - 34741805
Alignment:
Q  88 catgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaataaaaac 187  Q
    |||||||| || ||||||||| ||| |||||||||||| |||  |||||| |||||||||||||| |||||  ||||||||| ||| ||| ||| ||||     
T  34741691 catgttaaaaagtttaaaataataagtttgtattagaacttgtgcattttatattaaatatataattttttaataaataattattgttttcaattaaaag 34741790  T
Q  188 ttgctacttttagtt 202  Q
    ||| || ||||||||    
T  34741791 ttgttatttttagtt 34741805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 40225987 - 40226113
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| || |||| ||| | ||||||| |||  |||||  |||||||||| ||||||||||| ||||   |    
T  40225987 gtttttctatcatgtgcaaatttgcacatgttaagaagtttataattgaaattttgcattgaaatttatacattttgtaataaatatataatttttaaat 40226086  T
Q  162 aaataattgttggtttt-aataaaaac 187  Q
    |||||||||||| |||| |||||||||    
T  40226087 aaataattgttgtttttcaataaaaac 40226113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 297255 - 297178
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||||| || ||||||||| ||| ||||||||  || ||| |||||||||||| ||||||||||||||    
T  297255 aatttgcacatgttaagaagtttaaaataataactttgtattgaaacttgtacattttgtatttaatatataactttt 297178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 6818198 - 6818085
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||| ||||||||| || |||||||||||||  ||||||  ||| |||  |||||| |||||| |||| ||||||||    
T  6818198 agggtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaacttttt 6818099  T
Q  159 gttaaataattgtt 172  Q
      ||||||||||||    
T  6818098 aataaataattgtt 6818085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 149
Target Start/End: Complemental strand, 24993499 - 24993430
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||   |||||||||||    
T  24993499 aatttgcacatgttaagaaatttaaaataaaaattttgtattagaatttgtacattgaatattaaatata 24993430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 39701802 - 39701954
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  ||  ||||||    |||| |||||||||| ||||||||  |    
T  39701802 ggtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaacttttaat 39701901  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | | |||||||||||||| ||  |||| || |||||||||||||||||||||||    
T  39701902 t-agtaattgttggttttcaacgaaaagttactacttttagttaccttaacatg 39701954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 173
Target Start/End: Original strand, 16445731 - 16445846
Alignment:
Q  58 ttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttt 156  Q
    |||| |||||||||| |||||||| ||||||||| |||| || |||||||||| ||||||||||| |||  || ||||||  ||||||||||| ||||||    
T  16445731 ttagagtttttctattatgtgcaaatttgcacatattaagaagtttaaaatagaaattttgtattggaa-ctgtacatttaatattaaatataaaacttt 16445829  T
Q  157 ttgttaaataattgttg 173  Q
    |   |||||||||||||    
T  16445830 tgaataaataattgttg 16445846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 10129284 - 10129130
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||| ||||||||||   || ||| |||    |||| |||||||||| || | ||||    
T  10129284 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagc-tttt 10129186  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      | |||||||||||||||| ||| |||| || ||| |||||||||||||||||||    
T  10129185 aatcaataattgttggttttcaatgaaaaattactaattttagttaccttaacatg 10129130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 26834742 - 26834587
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||| || |||| ||||||||||| |||||||||  || ||| |||  |||||  |||||||||| || ||||||    
T  26834742 agggtttttctatcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagcttttt 26834643  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||||| | ||| |||| |||||||| || |||||||||| || |||| ||||    
T  26834642 aataaataagttttgtttttcaataaaaaattactacttttagatatcttagcatg 26834587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 31812294 - 31812139
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| ||||||||| |||| || |||||||| |||||||||  || ||| |||  |||||  |||||||||| || ||||||    
T  31812294 agggtttttctatcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagcttttt 31812195  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||||| | ||  |||| |||||||| || |||||||||| || |||||||||    
T  31812194 aataaataagttttatttttcaataaaaaattactacttttagatatcttaacatg 31812139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 7393263 - 7393352
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattg 170  Q
    |||||||||||||||| |||||||||||||||| ||||| ||  || |||   ||||| ||||||||||||||||||||  ||||||||||    
T  7393263 aatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataaataattg 7393352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 15198898 - 15198988
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatat 150  Q
    |||||||||||| |||||||| |||||||||||||| |||||| ||||||||| |||| |||  || ||| | |||||| |||||||||||    
T  15198898 gggtttttctatcatgtgcaaatttgcacatgttaaaaaattttaaatagtaactttgcattgtaacttgtatattttgaattaaatatat 15198988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 173
Target Start/End: Complemental strand, 38843885 - 38843771
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| ||||| || |||||||||| ||| || |||||||||  |||||| |||| ||| ||| ||||||  ||||||||||| |||||||     
T  38843885 agggtttttctatcatgtgtaaatttgcacatgctaagaagtttaaaatataaattttttattggaacttgtacatttaatattaaatataaaacttttg 38843786  T
Q  159 gttaaataattgttg 173  Q
      |||||||||||||    
T  38843785 aataaataattgttg 38843771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 7978066 - 7977997
Alignment:
Q  53 tttatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtatt 121  Q
    |||||||||||||||||||| || ||||| |||||| ||||||| || |||||||| |||||||||||||    
T  7978066 tttatttagggtttttctatcatatgcaaatttgcaaatgttaaaaagtttaaaatggtaattttgtatt 7977997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 12189578 - 12189704
Alignment:
Q  53 tttatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatata 151  Q
    |||| ||| ||||||||||| |||||||| |||||||||| ||| || |||||||||| || ||| |||| ||| ||| ||||||  ||||||||||| |    
T  12189578 tttaattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata-a 12189676  T
Q  152 actttttg-ttaaataattgttggtttt 178  Q
    | ||||||  ||||||||||||| ||||    
T  12189677 attttttgaataaataattgttgttttt 12189704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 12434006 - 12434132
Alignment:
Q  53 tttatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatata 151  Q
    |||| ||| ||||||||||| |||||||| |||||||||| ||| || |||||||||| || ||| |||| ||| ||| ||||||  ||||||||||| |    
T  12434006 tttaattaaggtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatata-a 12434104  T
Q  152 actttttg-ttaaataattgttggtttt 178  Q
    | ||||||  ||||||||||||| ||||    
T  12434105 attttttgaataaataattgttgttttt 12434132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 38212944 - 38213039
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||| |||||||| |||||||||||||| || |||||||||| |||||| ||||  || ||| |||| |  ||||||||||| |||||||    
T  38212944 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattgaaacttgtacatgtaatattaaatataaaactttt 38213039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 173
Target Start/End: Complemental strand, 45006151 - 45006037
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| ||  |||| |||||||||||||| || |||||||||| ||||||||||| |||  || |||| |  ||||||||||| |||||||    
T  45006151 tagggtttttctatcataagcaaatttgcacatgttaagaagtttaaaatag-aattttgtattggaacatgtacatctaatattaaatataaaactttt 45006053  T
Q  158 tgttaaataattgttg 173  Q
       |||||||||||||    
T  45006052 gaataaataattgttg 45006037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 9580106 - 9580196
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    ||||||||| ||| |||||||| ||| |||||||||| || |||||||||| |||||||||||  || ||| ||||||  |||||||||||    
T  9580106 agggtttttttatcatgtgcaaatttacacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatata 9580196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 215
Target Start/End: Complemental strand, 9743967 - 9743886
Alignment:
Q  134 ttttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatgca 215  Q
    |||| |||||||||| ||||||||  | ||||||||||||||||| |||||||| || ||||||||||||  |||||||||||    
T  9743967 ttttatattaaatatgtaacttttaat-aaataattgttggttttcaataaaaaattactacttttagttgtcttaacatgca 9743886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 13327942 - 13328091
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  ||  || |||    |||| |||||||||| |||| |||  | |    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatca 13328041  T
Q  163 aataattgttggtttt-aataaaaacttgctacttttagttaccttaacat 212  Q
    | |||||||||||||| ||| |||| || ||||||||||||||||||||||    
T  13328042 a-taattgttggttttcaatgaaaagttactacttttagttaccttaacat 13328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 19343831 - 19343988
Alignment:
Q  58 ttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacatttt-gtattaaatatataactt 155  Q
    ||||||||||| ||| |||||||| |||||||||||||| |  |||||| |||||||||||  ||  || ||| |  ||||  |||||||||| |||| |    
T  19343831 ttagggtttttttatcatgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgtattttttaatattaaatatgtaac-t 19343929  T
Q  156 tttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||  | |||||||||||||||| ||| |||| || |||||||| ||||||||||||||    
T  19343930 tttactcaataattgttggttttcaatgaaaagttactacttttggttaccttaacatg 19343988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 32186363 - 32186269
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||  ||||||| |||||| |||||||||| |||||||||| |||||| ||||  |||||  ||||||  ||||||||||| |||||||    
T  32186363 tttttctatcgtgtgcaaatttgcatatgttaataagtttaaaatagaaattttatattgaaatttacacatttaatattaaatataaaactttt 32186269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 36967088 - 36967222
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttt-t 178  Q
    |||||||||||||||| || |||||||||| || ||||||||  || ||| ||||||  ||||||||||| |||||||   || |||||||||| |||      
T  36967088 aatttgcacatgttaagaagtttaaaatagaaactttgtattgaaacttgcacatttaatattaaatataaaacttttgaatatataattgttgttttcc 36967187  T
Q  179 aataaaaacttgctacttttagttaccttaacatg 213  Q
    || ||||| || ||||| ||||||  |||||||||    
T  36967188 aagaaaaagttactactattagttgtcttaacatg 36967222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 81 - 202
Target Start/End: Complemental strand, 39430645 - 39430522
Alignment:
Q  81 atttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt-- 178  Q
    ||||||||||||||| || ||| ||||||||| ||| ||||| |||||  | ||||| |||||||| ||||| |||||  ||||||||||||  ||||      
T  39430645 atttgcacatgttaaaaagttttaaatagtaactttatattaaaatttatatattttatattaaatgtataa-tttttaataaataattgtttttttttt 39430547  T
Q  179 -aataaaaacttgctacttttagtt 202  Q
     ||| ||||||| ||||||||||||    
T  39430546 caatcaaaacttactacttttagtt 39430522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 186
Target Start/End: Complemental strand, 44091478 - 44091372
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttta 179  Q
    |||||||| ||||||| ||||||||| |||||| ||||  |||||| |||  |||||| |||||||| | ||  |||||  ||||||||||||| ||| |    
T  44091478 aatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattgttgttttca 44091379  T
Q  180 ataaaaa 186  Q
    |||||||    
T  44091378 ataaaaa 44091372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 1203788 - 1203724
Alignment:
Q  54 ttatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    |||| |||||||||||||| |||||||| |||||||||| ||| || |||||| |||||||||||    
T  1203788 ttatatagggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaattttg 1203724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 117
Target Start/End: Original strand, 18567412 - 18567471
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttg 117  Q
    |||||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||    
T  18567412 tagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttg 18567471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 45516367 - 45516316
Alignment:
Q  161 taaataattgttggttttaataaaaacttgctacttttagttaccttaacat 212  Q
    |||||||||||| |||| |||||||| || ||||||||||||| ||||||||    
T  45516367 taaataattgttagtttcaataaaaagttactacttttagttatcttaacat 45516316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 158
Target Start/End: Complemental strand, 7489778 - 7489684
Alignment:
Q  65 ttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||||||| |||||||| ||||  |||||| | || ||||||||| ||| ||||||||| |||||  | ||||| |||||||| |||||||||||    
T  7489778 ttttctatcatgtgcaaatttgtgcatgtttagaattttaaaataataagtttgtattaaaatttatatattttatattaaatgtataacttttt 7489684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 6141807 - 6141730
Alignment:
Q  81 atttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||||||||| |||  ||||||||||||||||||||  ||||||| ||| ||| ||| || |||||| |||| |||||    
T  6141807 atttgcacatattaggaaatttaaaatagtaattttacattagaacttgtacaatttataataaatacataagttttt 6141730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 40210839 - 40210971
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt- 178  Q
    |||||||||||||||| |  |||||| |||||| ||||  || |||||||    |||| |||||||||| |||| |||  | || ||||||||||||||     
T  40210839 aatttgcacatgttaagacgtttaaattagtaactttgactttgaatttgtgttttttatattaaatatgtaacatttaatcaa-taattgttggttttc 40210937  T
Q  179 aataaaaacttgctacttttagttaccttaacat 212  Q
    ||| |||| ||  |||||||||||||||||||||    
T  40210938 aatgaaaagttaatacttttagttaccttaacat 40210971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 13496709 - 13496757
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagt 110  Q
    |||||||||| |||||||| |||||||||||||| || |||||||||||    
T  13496709 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagt 13496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 1502718 - 1502871
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  1502718 gggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattggaatttgaacattttgtattaaatatataactttttg 1502817  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||    
T  1502818 ttaaataattgttgttttcaataaaaatttgctacttttagttaccttaacatg 1502871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 23576411 - 23576565
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||| |||  || ||||||||||||||||||||||||||||||||    
T  23576411 agggtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgcattgaaacttgaacattttgtattaaatatataacttttt 23576510  T
Q  159 gttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  23576511 gttaaataattgttggtttcaataaaaacttgttacttttagttaccttaacatg 23576565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 3121266 - 3121146
Alignment:
Q  92 ttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaataaaaacttgc 191  Q
    |||| |||||||||||||||| |||  ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3121266 ttaagaaatttaaaatagtaactttacattagaacttaaacattttgtattaaatatataactttttgttaaataattgttggtttcaataaaaacttgc 3121167  T
Q  192 tacttttagttaccttaacat 212  Q
    |||||||| ||||||||||||    
T  3121166 tacttttaattaccttaacat 3121146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 36490959 - 36490805
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| ||| |||| |||||||||||||| || ||||||||||||| |||| ||| ||| ||| |||||||||||| |||||||||||||||     
T  36490959 gggtttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataacttttta 36490860  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||||||||||| |||| ||||||||||| ||||||||| || | ||||||||    
T  36490859 ataaataattgttgtttttcaataaaaacttactacttttaattgctttaacatg 36490805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 23591876 - 23591724
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||| |||||| |||||  || |||| ||| ||| ||| ||||||||||||||||||||||||||||  |    
T  23591876 gtttttctatcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataactttttaat 23591777  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||| ||| |||| ||||||||||| ||| |||||||| | ||||||||    
T  23591776 aaataattattgattttcaataaaaacttactaattttagttgctttaacatg 23591724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 51920431 - 51920547
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||||| |||||| | ||||  ||||||||||| |||||||   |    
T  51920431 gtttttctatcatgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaatataaaacttttgaat 51920530  T
Q  162 aaataattgttggtttt 178  Q
    |||||||||||| ||||    
T  51920531 aaataattgttgttttt 51920547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 148
Target Start/End: Complemental strand, 1366225 - 1366139
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatat 148  Q
    |||||||||| |||||||| ||| ||||||| || ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  1366225 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaaatagtaattttgtattggaatttgaacatttagtattaaatat 1366139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 173
Target Start/End: Original strand, 39310782 - 39310897
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||||||||||| || |||||||||| ||||||||||| ||||||  ||||||  |||||| |||| |||||||    
T  39310782 tagggtttttctatcatgtgcaaatttgcacatgttaaaaagtttaaaatagaaattttgtattggaattttcacatttaatattaagtataaaactttt 39310881  T
Q  158 tgttaaataattgttg 173  Q
       |||||||||||||    
T  39310882 gaataaataattgttg 39310897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 13322055 - 13321913
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||||||| |||||||| |||||| ||||||| || |||||||||| ||||||||||| ||||||| ||||||  ||||||||||| |||||||       
T  13322055 ggtttttctatcatgtgcaaatttgcatatgttaagaagtttaaaatagaaattttgtattggaatttgtacatttaatattaaatataaaacttttgaa 13321956  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
     |||||||||||| |||| || ||||| || ||||| ||||||    
T  13321955 aaaataattgttgtttttcaagaaaaagttactactattagtt 13321913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 30362993 - 30363147
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||| ||| |||||||||||||||| ||||  || ||| |||  |||||| |||||||||| ||  |||||     
T  30362993 gggtttttctatcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgtaggttttta 30363092  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||| |||||||||||||| |||||||| || ||| |||||||  ||||||||||    
T  30363093 ataattaattgttggttttcaataaaaagttactatttttagtagccttaacatg 30363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 157
Target Start/End: Complemental strand, 6180374 - 6180269
Alignment:
Q  53 tttatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatata 151  Q
    |||| ||||||||||||||| |||||||| |||||||||||||| || |||||||||| |||||| |||| ||| ||| ||||||  ||||||||||| |    
T  6180374 tttaattagggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatataaa 6180275  T
Q  152 actttt 157  Q
    ||||||    
T  6180274 actttt 6180269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 47355396 - 47355529
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttta 179  Q
    ||||| |||||||||| |||||||||||| ||| |||||||| ||| |||  |||||| ||||||  ||||| ||||||| ||| ||||||||| ||| |    
T  47355396 aatttacacatgttaagaaatttaaaataataaatttgtattggaacttgttcattttatattaatgatatacctttttgataagtaattgttgttttca 47355495  T
Q  180 ataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||| ||  ||||||||||| | ||||||||    
T  47355496 ataaaaagtttatacttttagttgctttaacatg 47355529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 25465340 - 25465185
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||||||||||| || || |||||||||| |||| ||| ||| |||  |||||  |   |||||| ||||||||    
T  25465340 tagggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagtaaatttgcattggaacttgtgcatttaatggaaaatatttaactttt 25465241  T
Q  158 tgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    || ||||||||||||| || | |  |||| |||||||||||||| || ||||||||    
T  25465240 tgataaataattgttgtttctcaataaaagttgctacttttagtgactttaacatg 25465185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 39150324 - 39150478
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || |||||||    |||| |||||||||| ||||||||     
T  39150324 agggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaactttta 39150423  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | ||||||||||||||||| ||| |||| || |||||||||||| ||||||||||    
T  39150424 at-aaataattgttggttttcaatgaaaagttactacttttagttgccttaacatg 39150478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 157
Target Start/End: Complemental strand, 35512906 - 35512808
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||| |||||| |||| ||| ||| ||||||  ||||||||||| |||||||    
T  35512906 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatataaaactttt 35512808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 6754651 - 6754498
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||| ||| || |||||| |||||| ||||  || ||| |||  |||||| |||||| ||| ||  |||||     
T  6754651 gggtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagattttta 6754552  T
Q  160 ttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
     ||| ||||||||||||| |||||||| || ||| |||||||| ||||||||||    
T  6754551 ataattaattgttggtttcaataaaaagttactatttttagttgccttaacatg 6754498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 17919634 - 17919480
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||  ||| || |||||| |||||| ||||  || |||||||    |||| |||||||||| ||||||||     
T  17919634 agggtttttctatcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaactttta 17919535  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | ||||||||||||||||| ||| |||| || |||||||||||| ||||||||||    
T  17919534 at-aaataattgttggttttcaatgaaaagttactacttttagttgccttaacatg 17919480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 35438892 - 35438797
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||| |||||||| |||||||||||||| ||||||||||| |||| ||| | ||| ||||||   ||||| ||||||||||||||||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatatataacttttt 35438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 61 - 202
Target Start/End: Complemental strand, 38812920 - 38812777
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || || ||||||| |||||| ||||  || ||| ||||||  ||||||||||| |||||||      
T  38812920 gggtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaacttttga 38812821  T
Q  160 ttaaataattgttggttt-taataaaaacttgctacttttagtt 202  Q
     ||||||||||||| ||| ||| ||||| || ||||| ||||||    
T  38812820 ataaataattgttgttttctaagaaaaagttactactattagtt 38812777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 213
Target Start/End: Original strand, 7519996 - 7520149
Alignment:
Q  63 gtttttctataatgtgcaa--tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    |||||||||| ||||||||  ||| |||||||||| || |||||||||  || |||| |||  |||||| |||||||||||| |||||||||| ||||      
T  7519996 gtttttctatcatgtgcaaaattttcacatgttaagaagtttaaaataacaactttgcattgaaatttgtacattttgtatttaatatataacattttaa 7520095  T
Q  161 taaataattgtt-ggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||| | ||   |||||||||||| || |||||||||||| | ||||||||    
T  7520096 taaataagtattattttttaataaaaatttactacttttagttgctttaacatg 7520149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 34050318 - 34050435
Alignment:
Q  97 aaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctact 195  Q
    |||||||||||| ||||||||||||  || ||  ||||||| |||| ||||||||| |||||| ||||||||||||| |||| ||||| || ||| ||||    
T  34050318 aaatttaaaataataattttgtattgaaacttttacattttatatttaatatataattttttgataaataattgttgtttttcaataataatttgttact 34050417  T
Q  196 tttagttaccttaacatg 213  Q
    ||| ||| | ||||||||    
T  34050418 tttggttgctttaacatg 34050435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 9516758 - 9516651
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| ||||| || |||||||||||||| ||||||||||| |||| ||| | ||| || |||   ||||| ||||||||||||||||||||  ||    
T  9516758 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaata 9516659  T
Q  163 aataattg 170  Q
    ||||||||    
T  9516658 aataattg 9516651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 41625011 - 41624856
Alignment:
Q  59 tagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||| |||||||| |||||| ||| ||| || |||||| |||||| ||||  || ||| |||  |||||| |||||| ||| ||  ||||    
T  41625011 tagggtttttctatcatgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgtagatttt 41624912  T
Q  158 tgttaaataattgttggttttaataaaaacttgctacttttagttaccttaacatg 213  Q
    |  ||| ||||||||||||| |||||||| || ||| |||||||| | ||||||||    
T  41624911 taataattaattgttggtttcaataaaaagttactatttttagttgctttaacatg 41624856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 313929 - 313776
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || |||||| |||||| |||   || ||| |||    |||| |||||||||| || |||||      
T  313929 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaa 313830  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | || |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  313829 tcaa-taattgttggttttcaatcaaaaattactacttttagttaccttaacatg 313776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 29635766 - 29635872
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttta 179  Q
    |||||| ||||||||| |||||||||||||||| ||| ||||  || ||| | |||||||||| || ||||||||||||  ||||||||| |   |||||    
T  29635766 aatttgtacatgttaaaaaatttaaaatagtaactttatattgaaacttgtatattttgtatttaacatataactttttaataaataattatcattttta 29635865  T
Q  180 ataaaaa 186  Q
    |||||||    
T  29635866 ataaaaa 29635872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 34802147 - 34801994
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || |||||||| ||||||||||  | ||| |||  |||||  |||||||||| ||  |||||     
T  34802147 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttgt-ctggaacttgtgcatttcatattaaatatgtagtttttta 34802049  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     ||||||| | ||| |||| |||||||| || |||||||||| || |||||||||    
T  34802048 ataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatg 34801994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 202
Target Start/End: Complemental strand, 22167516 - 22167372
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||||||| |||| |||||||| |||||||||| ||| || |||||||||| || |||||||| ||| ||| ||||||  ||||||||||| || |||||    
T  22167516 agggttttcctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatata-aatttttt 22167418  T
Q  159 g-ttaaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    |  ||||||||||||| |||| || ||||| || ||||| ||||||    
T  22167417 gaataaataattgttgtttttcaagaaaaagttactactattagtt 22167372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 7824876 - 7824967
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgt 171  Q
    |||||||||||||||| || |||||||||  ||||||||| |  |||||| ||||||  ||||||||||| |||||||   |||||||||||    
T  7824876 aatttgcacatgttaaaaagtttaaaataaaaattttgtaatgaaatttgtacatttaatattaaatataaaacttttgaataaataattgt 7824967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 25532387 - 25532292
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||| || ||||| ||||| |||||||| || ||||||| || |||||||||||| |||||  ||||||  ||||||||||| |||||||    
T  25532387 gtttttctatcatatgcaaatttgcgcatgttaaaaagtttaaaaaagaaattttgtattaaaatttatacatttaatattaaatataaaactttt 25532292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 30172060 - 30171905
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||| | |||| ||||  || ||| |||  |||||  |||||||||| || ||||||    
T  30172060 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagcttttt 30171961  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||||| | ||| |||| |||||||| || |||||||||| |  |||||||||    
T  30171960 aataaataagttttgtttttcaataaaaaattactacttttagatgtcttaacatg 30171905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 30187601 - 30187446
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||| | |||| ||||  || ||| |||  |||||  |||||||||| || ||||||    
T  30187601 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagcttttt 30187502  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||||| | ||| |||| |||||||| || |||||||||| |  |||||||||    
T  30187501 aataaataagttttgtttttcaataaaaaattactacttttagatgtcttaacatg 30187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 41676561 - 41676620
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtatta 122  Q
    ||||||||| |||||||| |||||||||||||| ||||| |||||| |||||||||||||    
T  41676561 tttttctatcatgtgcaaatttgcacatgttaagaaattcaaaataataattttgtatta 41676620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 44918205 - 44918051
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||| |||||| |||   || ||| ||     |||| |||||||||| || |||||     
T  44918205 agggtttttctatcatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgtagctttta 44918106  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
     | || ||||||||| |||| |||||||| || |||||||||||||||||||||||    
T  44918105 atcaa-taattgttgattttcaataaaaatttactacttttagttaccttaacatg 44918051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 149
Target Start/End: Original strand, 3168065 - 3168155
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    ||||||||||||| |||||||| |||||||| ||||| || |||||||||| | ||| ||||| ||| ||| ||||||  |||||||||||    
T  3168065 agggtttttctatcatgtgcaaatttgcacacgttaaaaagtttaaaatagaattttagtattggaacttgtacatttaatattaaatata 3168155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 24669087 - 24669009
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    |||||||||||||||| || ||||||||||||| ||| ||||| || ||   |||||| |||||||||||||| |||||    
T  24669087 aatttgcacatgttaagaagtttaaaatagtaaatttatattataacttatgcattttatattaaatatataatttttt 24669009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 51382450 - 51382398
Alignment:
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    ||||||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  51382450 aaataattgttggttttcaatgaaaagttactacttttagttaccttaacatg 51382398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 5875210 - 5875269
Alignment:
Q  58 ttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaatttt 116  Q
    ||||| ||||||||| |||||||| |||||||||||||| || |||||||||| ||||||    
T  5875210 ttaggatttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaatttt 5875269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 6569977 - 6570035
Alignment:
Q  55 tatttagggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaa 112  Q
    ||||| |||||||||||| |||||||| |||||||||||||| || |||||| ||||||    
T  6569977 tattttgggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaa 6570035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 28016340 - 28016266
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataact 154  Q
    |||||||||||||||| || |||||||||  ||||||||||| ||| ||| || |||  ||||||||||| ||||    
T  28016340 aatttgcacatgttaagaattttaaaatataaattttgtattggaacttgtacttttaatattaaatataaaact 28016266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 3096390 - 3096333
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaatttt 116  Q
    ||||||||||||| |||||||| |||||||||| ||| ||||||||| || |||||||    
T  3096390 agggtttttctattatgtgcaaatttgcacatgataaaaaatttaaagtaataatttt 3096333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 23808594 - 23808517
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttt 157  Q
    |||||||||||||||| || ||| |||||| ||||||||||| ||| ||  ||||||  ||||||||||  |||||||    
T  23808594 aatttgcacatgttaagaagttttaaatagaaattttgtattggaacttatacatttaatattaaatatcaaactttt 23808517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 39781517 - 39781432
Alignment:
Q  65 ttttctataatgtgca-atttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatata 149  Q
    |||||||| ||||||| ||||||||||||||| || ||| |||||  |||||||||||  |||||| ||||||  || ||||||||    
T  39781517 ttttctatcatgtgcatatttgcacatgttaaaaagttttaaataaaaattttgtattgaaatttgtacatttaataataaatata 39781432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 48085879 - 48085924
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaa 125  Q
    |||||||||||||||| |||||||||||  ||||||||| ||||||    
T  48085879 aatttgcacatgttaagaaatttaaaatgttaattttgtcttagaa 48085924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 49798843 - 49798936
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttg 173  Q
    |||||| |||| |||| |||||||||||| || ||||| ||  ||| ||  ||| ||| |||||||||||||| |||||  |||||||||||||    
T  49798843 aatttgtacatattaaaaaatttaaaataatagttttgcatgggaacttttacaatttatattaaatatataaatttttactaaataattgttg 49798936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 51382495 - 51382446
Alignment:
Q  60 agggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaata 108  Q
    ||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  51382495 agggtttttctatcatgtgcaactttgcacatgttaagaagtttaaaata 51382446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 51467606 - 51467545
Alignment:
Q  87 acatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatat 148  Q
    ||||||||| ||||||||||||| || |||||||| ||| ||| ||||||  ||||||||||    
T  51467606 acatgttaagaaatttaaaataggaagtttgtattggaacttgtacatttaatattaaatat 51467545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 8062310 - 8062231
Alignment:
Q  134 ttttgtattaaatatataactttttgttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    |||| |||||||||||||  |||||  | ||||||||||| |||| ||| |||| || |||||||||||||||||||||||    
T  8062310 ttttatattaaatatatag-tttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatg 8062231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 215
Target Start/End: Original strand, 21854139 - 21854271
Alignment:
Q  84 tgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttt-aata 182  Q
    |||||||||||| || |||||| | |||| ||||  || ||| ||| ||||||| |||||||||  || |||||   ||||||| ||||| |||| |||     
T  21854139 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaaataaataaatgttgtttttcaatt 21854238  T
Q  183 aaaacttgctacttttagttaccttaacatgca 215  Q
    |||| || |||||||||| || |||||||||||    
T  21854239 aaaaattactacttttagatatcttaacatgca 21854271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 33048174 - 33048222
Alignment:
Q  124 aatttgaacattttgtattaaatatataactttttgttaaataattgtt 172  Q
    |||||| | ||||| ||||||||||||||||||||  ||||||||||||    
T  33048174 aatttgtatattttatattaaatatataactttttaataaataattgtt 33048222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 35941106 - 35941162
Alignment:
Q  146 tatataactttttgttaaataattgttggttttaataaaaacttgctacttttagtt 202  Q
    |||||||||||||  ||||||| ||||| |||||||||||| ||  |||||||||||    
T  35941106 tatataactttttaataaataaatgttgtttttaataaaaagttaatacttttagtt 35941162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 43671825 - 43671750
Alignment:
Q  104 aaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggttttaa 180  Q
    ||||| ||||||||||||| | |||   |||||| ||||||||||||||| ||||  ||||||||||||| ||||||    
T  43671825 aaataataattttgtattaaattttttgcattttatattaaatatataac-ttttaataaataattgttgattttaa 43671750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 43909368 - 43909275
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||| |||||||| |||||||||  ||| |||||| |||| |||| ||||| ||| || |||   ||||| ||||||||||||||||||||    
T  43909368 tttttctatcatgtgcaaatttgcacat--taaaaaattttaaatggtaagtttgtcttataacttgtgtattttatattaaatatataacttttt 43909275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 17788 - 17929
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    ||||||||||||| ||||| ||||||||||||| ||| || |||||||||| ||| |||| ||| ||| ||||||||||||||| |||||| |||||  |    
T  17788 gtttttctataatttgcaaatttgcacatgttattaagttaaaaatagtaactttatattggaacttgtacattttgtattaaagatataaatttttaat 17887  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    |||||||||||  |||| ||||||| |||| |||||||||||    
T  17888 aaataattgttatttttcaataaaagcttgttacttttagtt 17929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 17996 - 18112
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| || ||||| ||||||| |||||| |  || |||||||||  |||||||| ||||||| ||||||| |||||||||||||||||| |  |    
T  17996 gtttttctatcatatgcaaatttgcacgtgttaaaatgttcaaaatagtatgtttgtattggaatttgtacattttatattaaatatataactttctaat 18095  T
Q  162 aaataattgttggtttt 178  Q
    |||||||||||| ||||    
T  18096 aaataattgttgttttt 18112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 148
Target Start/End: Original strand, 24527 - 24613
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatat 148  Q
    |||||||||| |||||||| ||| ||||||| || ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  24527 gtttttctatcatgtgcaaatttacacatgtaaagaaatttaaaatagtaattttgtattggaatttgaacatttagtattaaatat 24613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 52777 - 52930
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  || ||| |||    ||||||||||||||| ||||||||      
T  52777 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaa 52876  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | || |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  52877 tcaa-taattgttggttttcaatgaaaagttactacttttagttaccttaacatg 52930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 145857 - 145704
Alignment:
Q  61 gggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttg 159  Q
    |||||||||||| |||||||| |||||||||||||| || |||||| |||||| ||||  || ||| |||    ||||||||||||||| ||||||||      
T  145857 gggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaa 145758  T
Q  160 ttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
    | || |||||||||||||| ||| |||| || |||||||||||||||||||||||    
T  145757 tcaa-taattgttggttttcaatgaaaagttactacttttagttaccttaacatg 145704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 202
Target Start/End: Original strand, 94018 - 94159
Alignment:
Q  63 gtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtt 161  Q
    |||||||||| |||||||| |||||| ||||||| || ||| ||||| ||| |||  ||| ||| ||  |||||||||||||||||||||  |||||  |    
T  94018 gtttttctatcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagttttttaat 94117  T
Q  162 aaataattgttggtttt-aataaaaacttgctacttttagtt 202  Q
    |||||||| || ||||| ||||||||||| ||||||||||||    
T  94118 aaataattattagttttcaataaaaacttactacttttagtt 94159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 13264 - 13113
Alignment:
Q  62 ggtttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgt 160  Q
    ||||||||||| |||||||| |||||||||||||| || ||||||||||||| |||   || |||||||    |||| |||||||||| || | ||||      
T  13264 ggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatatgtagc-ttttaa 13166  T
Q  161 taaataattgttggtttt-aataaaaacttgctacttttagttaccttaacat 212  Q
    | || ||||||||||||| ||| |||| || ||||||||||||||||||||||    
T  13165 tcaacaattgttggttttcaatgaaaaattactacttttagttaccttaacat 13113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Original strand, 1461 - 1534
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataac 153  Q
    |||||||||||||||| || ||||||| ||||||||| | ||| ||||||  |||||| |||||||||||||||    
T  1461 aatttgcacatgttaagaagtttaaaagagtaattttatcttaaaatttgttcattttatattaaatatataac 1534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 213
Target Start/End: Complemental strand, 5868 - 5717
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||||||| |||||||||||||| || |||||| |||||| |||   ||| |||||| |  |||| |||||||||| | | |||||  |     
T  5868 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgt-agtttttaatc 5770  T
Q  163 aataattgttggtttt-aat-aaaaacttgctacttttagttaccttaacatg 213  Q
    |||||||||||||||| ||| ||||| || ||| |||||||||||||||||||    
T  5769 aataattgttggttttcaataaaaaaattactatttttagttaccttaacatg 5717  T

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Target: scaffold0111 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 37111 - 37266
Alignment:
Q  60 agggtttttctataatgtgc-aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataacttttt 158  Q
    ||||||||||||| |||||| |||||||||||||||| || |||||| |  ||| ||||  || ||| |||  |||||  |||||||||| || ||||||    
T  37111 agggtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagcttttt 37210  T
Q  159 gttaaataattgttggtttt-aataaaaacttgctacttttagttaccttaacatg 213  Q
      ||||||| | ||| |||| |||||||| || |||||||||| || |||||||||    
T  37211 aataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatg 37266  T

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Target: scaffold0618 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 186
Target Start/End: Original strand, 8432 - 8538
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgttaaataattgttggtttta 179  Q
    |||||||| ||||||| ||||||||| |||||| ||||  |||||| |||  |||||| |||||||| | ||  |||||  ||||||||||||| ||| |    
T  8432 aatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattgttgttttca 8531  T
Q  180 ataaaaa 186  Q
    |||||||    
T  8532 ataaaaa 8538  T

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Target: scaffold0149 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 186
Target Start/End: Complemental strand, 22641 - 22517
Alignment:
Q  64 tttttctataatgtgcaa-tttgcacatgttaataaatttaaaatagtaattttgtattagaatttgaacattttgtattaaatatataactttttgtta 162  Q
    ||||||||| |||| ||| |||||||||||||| |||||||||||  ||||||||| |||||| ||    ||| | | ||||||||||| ||||||  ||    
T  22641 tttttctattatgtacaaatttgcacatgttaagaaatttaaaatgttaattttgtcttagaacttttgtattctatgttaaatatatagctttttaata 22542  T
Q  163 aataattgttggtttt-aataaaaa 186  Q
    |||||||| || |||| ||||||||    
T  22541 aataattgatgtttttcaataaaaa 22517  T

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Target: scaffold0631 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0631
Description:

Target: scaffold0631; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 584 - 539
Alignment:
Q  80 aatttgcacatgttaataaatttaaaatagtaattttgtattagaa 125  Q
    |||||||||||||||| |||||||||||  ||||||||| ||||||    
T  584 aatttgcacatgttaagaaatttaaaatgttaattttgtcttagaa 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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