View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15873_low_33 (Length: 243)
Name: NF15873_low_33
Description: NF15873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15873_low_33 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 16044886 - 16045106
Alignment:
| Q |
13 |
tcacaaaccaaatcacctcctttcacaatccatttccctcaaagacttaacttattccaccctcattttctcacacattaccccccaccctaatgactat |
112 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
16044886 |
tcacaaaccaaatcacctcctttcacaatccatttccctcaaagactttacttattccaccctcattttttcacacattaccccccaccctaatgactat |
16044985 |
T |
|
| Q |
113 |
gctttcaacatcatgcttcgtgccaccactactacttggcatgattaccctctcacccttcacctttaccaccaaatgaaaaccctaaatatttccccga |
212 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16044986 |
gctttcaacatcatgcttcgtgccaccaccactacttggcatgattaccctctcacccttcacctttaccaccaaatgaaaaccctaaatatttccccga |
16045085 |
T |
|
| Q |
213 |
ataacttcacatttccctttg |
233 |
Q |
| |
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|||||||||||||||| |||| |
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| T |
16045086 |
ataacttcacatttccgtttg |
16045106 |
T |
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